Template-based Modeling Results for YIDB_ECOLI

Submitted Primary Sequence

>Length 132
MGLFDEVVGAFLKGDAGKYQAILSWVEEQGGIQVLLEKLQSGGLGAILSTWLSNQQGNQSVSGEQLESALGTNAVSDLGQKLGVDTSTASSLLAEQLPKIIDALSPQGEVSPQANNDLLSAGMELLKGKLFR
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MGLFDEVVGAFLKGDAGKYQAILSWVEEQGGIQVLLEKLQSGGLGAILSTWLSNQQGNQSVSGEQLESALGTNAVSDLGQKLGVDTSTASSLLAEQLPKIIDALSPQGEVSPQANNDLLSAGMELLKGKLFR
CCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MGLFDEVVGAFLKGDAGKYQAILSWVEEQGGIQVLLEKLQSGGLGAILSTWLSNQQGNQSVSGEQLESALGTNAVSDLGQKLGVDTSTASSLLAEQLPKIIDALSPQGEVSPQANNDLLSAGMELLKGKLFR
531022010111523211120001102321103200220242111100110023332232011320130022310120044121212100210031013001300231302332222001100220223125
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MGLFDEVVGAFLKGDAGKYQAILSWVEEQGGIQVLLEKLQSGGLGAILSTWLSNQQGNQSVSGEQLESALGTNAVSDLGQKLGVDTSTASSLLAEQLPKIIDALSPQGEVSPQANNDLLSAGMELLKGKLFR
1	MUSTER	1z67A	0.921	0.955	3.008	threading_1	--LFDEVVGAFLKGDAGKYQAILSWVEEQGGIQVLLEKLQSGGLGAILSTWLSNQQRNQSVSGEQLESALGTNAVSDLGQKLGVDTSTASSLLAEQLPKIIDALSPQGEVQANND---LLSAGELLKGKLF-
2	SPARKS	1z67a	0.921	0.955	4.132	threading_2	--LFDEVVGAFLKGDAGKYQAILSWVEEQGGIQVLLEKLQSGGLGAILSTWLSNQQRNQSVSGEQLESALGTNAVSDLGQKLGVDTSTASSLLAEQLPKIIDALSPQGEVQANND---LLSAGELLKGKLF-
3	PROSPECT2	1z67A	0.913	0.955	2.287	threading_3	L--FDEVVGAFLKGDAGKYQAILSWVEEQGGIQVLLEKLQSGGLGAILSTWLSNQQRNQSVSGEQLESALGTNAVSDLGQKLGVDTSTASSLLAEQLPKIIDALSPQGEVQANND---LLSAGELLKGKLF-
4	PPA-I	1z67A	0.921	0.955	4.306	threading_4	--LFDEVVGAFLKGDAGKYQAILSWVEEQGGIQVLLEKLQSGGLGAILSTWLSNQQRNQSVSGEQLESALGTNAVSDLGQKLGVDTSTASSLLAEQLPKIIDALSPQGEVQANND---LLSAGELLKGKLF-
5	HHPRED-l	1z67_A	0.992	0.955	8.310	threading_5	--LFDEVVGAFLKGDAGKYQAILSWVEEQGGIQVLLEKLQSGGLGAILSTWLSNQQRNQSVSGEQLESALGTNAVSDLGQKLGVDTSTASSLLAEQLPKIIDALSPQGEV--QANNDLLSAG-ELLKGKLF-
6	HHPRED-g	1z67_A	0.992	0.955	7.814	threading_6	--LFDEVVGAFLKGDAGKYQAILSWVEEQGGIQVLLEKLQSGGLGAILSTWLSNQQRNQSVSGEQLESALGTNAVSDLGQKLGVDTSTASSLLAEQLPKIIDALSPQGEV--QANNDLLSAG-ELLKGKLF-
7	SP3	1z67a	0.921	0.955	2.185	threading_7	--LFDEVVGAFLKGDAGKYQAILSWVEEQGGIQVLLEKLQSGGLGAILSTWLSNQQRNQSVSGEQLESALGTNAVSDLGQKLGVDTSTASSLLAEQLPKIIDALSPQGEVQANND---LLSAGELLKGKLF-
8	SAM-T99	1z67A	0.849	0.955	4.740	threading_8	--LFDEVVGAFLKGDAGKYQAILSWVEEQGGIQVLLEKLQSGGLGAILSTWLSNQQRNQSVSGEQLESALGTNAVSDLGQKLGVDTSTASSLLAEQLPKIIDALSPQGEVQANNDLLSAGELLK----GKLF
9	MUSTER	3lr2A	0.110	0.894	0.761	threading_9	TTPWTNPGLAEN-----FMNSFMQGLSSMPGFASQLDDMST--IAQSMVQSIQSLAAQGRTSPNKLQALN-ASSMAEIAASGGGSLSTKTSSIASAMSNAFLQTT--GVVNQPFINEITQLVSMFAQA----
10	SPARKS	3gqca	0.129	1.000	0.621	threading_10	LVDITEILAETKLTPDEFANAVRMEIKDQTKVDDFIRGQLVTGVGHSMESKLASLGIKQYMTMAKLQKEFGPKTGQMLYRFCGLQPKEAEAFLLSLSEEIQRRLEATGMKGKDQATDNAKIIGKAMLNMFHT

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.966 to 1z67A SCOP code=a.259.1.1	TM-score=0.447 to 1uiyA SCOP code=c.14.1.3	TM-score=0.966 to 1z67A SCOP code=a.259.1.1	TM-score=0.966 to 1z67A SCOP code=a.259.1.1	TM-score=0.966 to 1z67A SCOP code=a.259.1.1