Template-based Modeling Results for CCA_ECOLI

Submitted Primary Sequence

>Length 412
MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQRCPKPE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQRCPKPE
CEEEEECCHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEEEEEECCCCCCCCEEEECCCCCHHHHHHHCCCHHHHHHCCCCCCEECCCCCHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQRCPKPE
3100001000000003130310000001110310020002301330100002323210110102122322221210101332203100331001000000133120000120011023200100121113100000100100031132214013300200220231220330113100300120022320310020022010021000101301213222421211100110010011022012201000000022112222233211212000100120022003203023303200220020012032122122310020022022222231022001000001313222322322102002200210230213101321030220221022111200221233313435
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQRCPKPE
1	MUSTER	1vfgB	0.240	0.811	2.000	threading_1	LRAYIVGGVVRDILLGKEVWDVDFVVE-GNAIELAKELARRHGPEFGTAHLKIGKLKLEFATA-RRETV----------EPASLKEDLIRRDFTINAMAISDYGTLIDYFGGLRDLKDKVIRVLHPVFIEDPVRILRALRFAGR---LNFKLSRSTEKLLKQAVNLGLLKEAPRGRLINEIKLALREDRFLEILELYRKYRVLEEIIEGFQWNEKVLQKLYALRK-VVDWHALEFSEE---RIDYGWLYLLILISNLDYERG-------------------KHFLEEMSAPSWVRETYKFMKFKLGSLKEEKAKENYEVYRLL-------KPLHTSVLLLLML--------EEELKEKIKLYLEKLRKVKLPLKREIMNKIKLAALE-------------------------
2	SPARKS	3aqka	0.236	0.842	5.511	threading_2	YEAWLVGGGVRDLLLGKKPKDFD-VTTNATPEQVRKLNCRLVGRRFRL-AHVMFGPEIIEVATFR-------------NIFGSIEEDAQRRDFTINSLYYSVDFTVRDYVGGMKDLKDGVIRLIGNPYREDPVRMLRAVRFAAK---LGMRISPETAEPIPRLA--TLLNDIPPAHLFEESLKLLQAGYGYETYKLLCEYHLFQPLFPTITRYFT---ENGDSPMERIIEQVLKNTDTRIHNDNPAFLFAAMFWYPLLETAQQESGLTYHDAFALAMNDVLDEACRSLAIPKRLTTLTRDIWQLQLRMSRRQGKRAWKLLE----HPKFRAAYDLLALRA------------EVERNAELQRLVKWWGEFQVSAPPDQKGM-LN--ELD-----------------------
3	PROSPECT2	3h37A	0.211	0.840	3.427	threading_3	NPVYVVGGFVRDLLLGIKNLDIDIVVEGN-ALEFAEYAKLVKHDKFTASLFLKGGLRIDIAT-----------------AESTIKKDLYRRDFTINAAIKKDFGLLIDFFGGYRDLKEGVIRVLHTLFVDDPTRILRAIRFEQRF---DFRIEETTERLLKQAVEEGYLERTTGPRLRQELEKILEEKNPLKSIRRA-QFDVIKHLFPKTYYTPSDEKE--------NLFRNIPWVEENFGEVDRFYAVLHVFLEFYDD-------------------ESWKEVRDRYSLRRNLINEIRHVEKSAPALLELSEVPASFVYPLVKGVS----NETICHFLAYLSGE-------------KEGLFKSYLLKIKNINGEYLIRKGITGKIIGEVLEKIEEEILEEVLASLETEGK
4	PPA-I	1vfgB	0.227	0.813	2.465	threading_4	LRAYIVGGVVRDILLGKEVWDVDFVVEGNAIELAKELARRHGVPEFGTAHLKIGKLKLEFATA-RRETV----------EPASLKEDLIRRDFTINAMAIEDYGTLIDYFGGLRDLKDKVIRVLHPVFIEDPVRILRALRFAGRL---NFKLSRSTEKLLKQAVNLGLLKEAPRGRLINEIKLALREDRFLEILELYRKYRVLEEIIEGFQWNEKVLQKLYALR-KVVDWHALEFSEE---RIDYGWLYLLILISNLDYERG-------------------KHFLEEMSAPSWVRETYKFMKFKLGSLKEEKAKENYEVYRLLKPLH-------TSVLLLL--------MLEEELKEKIKLYLEKLRKVKLPLKREIMNKIKLAALE-------------------------
5	HHPRED-l	1miw_A	0.272	0.820	6.450	threading_5	YDAYFVGGAVRDLLLGRPIGDVDIATS-ALPEDV-AIFPKDVGSKHGTVVVVHKGKAYEVTKTDG---------S--VTFVRSLEEDLKRRDFT-NAIA-DEYGTIIDPFGGREAIRRRIIRTVGEAFREDALR--RAVRFVSEL---GFALAPDTEQAIVQNA--PLLAHISVER-----EKLLGGPFAARALPLLAETGLNAY-LPGLAGKEKQLRLAAA--------------YR-WPWLAAREERWALLCHALGVQE-------------------SRPFLRAWKLPNKVVDEAGAILTALADIPRPEAWTNEQLFSAGL--------ERAL-SVETVRAAFTGAPPGPWHEKLR-RRFAIKTKGELAVNGKDVIEVGKPGPWVKEALDAIWRAVVNWL-ERNRTRE-
6	HHPRED-g	1vfg_A	0.244	0.767	5.663	threading_6	LRAYIVGGVVRDILLGKEVWDVDFVVEG-NAIELAARRHGHPFPEFGTLKIGKLKLEFATARRET---------V----EPASLKEDLIRRDFTINAMAISVNGTLIDYFGGLRDLKDKVIRVLHPSFIEDPVRILRALRFAGRL---NFKLSRSTEKLLKQAVNLGLLKEAPRGRLINEIKLALREDRFLEILELYRKYRVLEEIIEGFQWNEKVLQKLYALRKV-VDWHALEFSE---ERIDYGWLYLLILISNLDYER-------------------GKHFLEEMSAPSWVRETYKFMKFKLGSLKEELAKENYEVYRLLKPLH-------TSVLL-LLMLEE-------ELKEKIKLYLEKLRKVKL-----------------------------------------
7	SP3	3aqka	0.248	0.842	4.918	threading_7	YEAWLVGGGVRDLLLGKKPKDFD-VTTNATPEQVRKLNCRLVGRRFRL-AHVMFGPEIIEVATFR-------------NIFGSIEEDAQRRDFTINSLYYSADFTVRDYVGGMKDLKDGVIRLIGNPYREDPVRMLRAVRFAAK---LGMRISPETAEPIPRL--ATLLNDIPPAHLFEESLKLLQAGYGYETYKLLCEYHLFQPLFPTITRYFTENG---DSPMERIIEQVLKNTDTRIHMRVNPAFLFAAMWYPLLETIAQESGLTYHDAFALAMNDVLDEACRSLAIPKRLTTLTRDIWQLQLRMSRRQG---KRAWKLLE-HPKFRAAYDLLALRAEVE---------RNAELQRLVKWWGEFQVSAPPDQKGMLNE-LD----------------------------
8	SAM-T99	1mivA	0.254	0.833	4.981	threading_8	YDAYFVGGAVRDLLLGRPIGDVDI-ATSALPEDVAIFKTIDVGSKHGTVVVVHKGYEVTTFKTDG---------SVTFV--RSLEEDLKRRDFT-NAIADE--GTIIDPFGGREAIRRRIIRTVGERFREDALR--RAVRFVSEL---GFALAPDTEQAIVQN--APLLAHISVERTEE---KLLGGPFAARALPLLAETGLNAY-LPGLAGKEKQLRLAAAY---------------RWPWLAAREERWALLC-------------------HALGVQESRPFLRAWKLPNKVVDEAGAILTALADIPRPEAWTNEQLFSAGLERA---------LSVETVRAAFTGAPPGPEKLRRRFASLPIKTKGELAVNGKDVIEWVGAGPWVKEALDAIWRAVVNGEVENEKERIY
9	MUSTER	3aqkA	0.231	0.840	1.955	threading_9	YEAWLVGGGVRDLLLGKKPKDFDVTT-NATPEQVRKLFCRLVGRRFRLAHVMFGPEIIEVAT--R-------------NIFGSIEEDAQRRDFTINSLYYSADFTVRDYVGGMKDLKDGVIRLIGNPYREDPVRMLRAVRFAAK---LGMRISPETAEPIPRLA--TLLNDIPPAHLFEESLKLLQAGYGYETYKLLCEYHLFQPLFPTITRYFTENGDSPME---RIIEQVLKNTDTRIHNVNPAFLFAAMFWYPLLETIAQESGLTYHDAFALAMNDVLDEACRSLAIPKRLTTLTRDIWQLQLRMSRRQG---KRAWKLLEH-------PKFRAAYDLLALRAEVERNAELQ--RLVKWWGEFQVSAPP-DQKGMLNE-LD----------------------------
10	SPARKS	1vfga	0.255	0.762	4.808	threading_10	LRAYIVGGVVRDILLGKEVWDVDFVVEGN-AIELAKELARRHGVNV----HPFPEFGTAHLKIGKLK-LEFATARRETVEPASLKEDLIRRDFTINAMAISVNGTLIDYFGGLRDLKDKVIRVLHPVFIEDPVRILRALRFAGR---LNFKLSRSTEKLLKQAVNLGLLKEAPRGRLINEIKLALREDRFLEILELYRKYRVLEEIIEGF---------QWNEKVLQKLYALRKVVDWHALEIDYGWLYLLILISNLDYERGEEMSAPSWVRETYKFMKFLGSLKEELKKAKENYEVYRLLKPLHTSVLLLLMLEKEKIKLYLEKLRKVKLP--------------------------------------------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.816 to 1vfgB SCOP code=a.173.1.1	TM-score=0.696 to 1vfgB SCOP code=a.173.1.1	TM-score=0.695 to 1vfgB SCOP code=a.173.1.1	TM-score=0.714 to 1vfgB SCOP code=a.173.1.1	TM-score=0.829 to 1vfgB SCOP code=a.173.1.1