Template-based Modeling Results for AGAL_ECOLI

Submitted Primary Sequence

>Length 451
MMSAPKITFIGAGSTIFVKNILGDVFHREALKTAHIALMDIDPTRLEESHIVVRKLMDSAGASGKITCHTQQKEALEDADFVVVAFQIGGYEPCTVTDFEVCKRHGLEQTIADTLGPGGIMRALRTIPHLWQICEDMTEVCPDATMLNYVNPMAMNTWAMYARYPHIKQVGLCHSVQGTAEELARDLNIDPATLRYRCAGINHMAFYLELERKTADGSYVNLYPELLAAYEAGQAPKPNIHGNTRCQNIVRYEMFKKLGYFVTESSEHFAEYTPWFIKPGREDLIERYKVPLDEYPKRCVEQLANWHKELEEYKKASRIDIKPSREYASTIMNAIWTGEPSVIYGNVRNDGLIDNLPQGCCVEVACLVDANGIQPTKVGTLPSHLAALMQTNINVQTLLTEAILTENRDRVYHAAMMDPHTAAVLGIDEIYALVDDLIAAHGDWLPGWLHR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MMSAPKITFIGAGSTIFVKNILGDVFHREALKTAHIALMDIDPTRLEESHIVVRKLMDSAGASGKITCHTQQKEALEDADFVVVAFQIGGYEPCTVTDFEVCKRHGLEQTIADTLGPGGIMRALRTIPHLWQICEDMTEVCPDATMLNYVNPMAMNTWAMYARYPHIKQVGLCHSVQGTAEELARDLNIDPATLRYRCAGINHMAFYLELERKTADGSYVNLYPELLAAYEAGQAPKPNIHGNTRCQNIVRYEMFKKLGYFVTESSEHFAEYTPWFIKPGREDLIERYKVPLDEYPKRCVEQLANWHKELEEYKKASRIDIKPSREYASTIMNAIWTGEPSVIYGNVRNDGLIDNLPQGCCVEVACLVDANGIQPTKVGTLPSHLAALMQTNINVQTLLTEAILTENRDRVYHAAMMDPHTAAVLGIDEIYALVDDLIAAHGDWLPGWLHR
CCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCCEEEEEECCCCCCHHHCCCEECHHHCCCCEECCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCHHHEEEEEEEECCEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MMSAPKITFIGAGSTIFVKNILGDVFHREALKTAHIALMDIDPTRLEESHIVVRKLMDSAGASGKITCHTQQKEALEDADFVVVAFQIGGYEPCTVTDFEVCKRHGLEQTIADTLGPGGIMRALRTIPHLWQICEDMTEVCPDATMLNYVNPMAMNTWAMYARYPHIKQVGLCHSVQGTAEELARDLNIDPATLRYRCAGINHMAFYLELERKTADGSYVNLYPELLAAYEAGQAPKPNIHGNTRCQNIVRYEMFKKLGYFVTESSEHFAEYTPWFIKPGREDLIERYKVPLDEYPKRCVEQLANWHKELEEYKKASRIDIKPSREYASTIMNAIWTGEPSVIYGNVRNDGLIDNLPQGCCVEVACLVDANGIQPTKVGTLPSHLAALMQTNINVQTLLTEAILTENRDRVYHAAMMDPHTAAVLGIDEIYALVDDLIAAHGDWLPGWLHR
5532110000000000002100000122321321100001022210310220022003212220202001113100330000000011122321112112002311021111111020000210110300120021013101200000010000000100123123220000010010002100310403221010200000100000101122232212100220121132222233323122301110112002101100021130012001111322232002213221231121012102211310231342241323213200010010012132100000011210032024100010000021300100201302220110021011011000100222112200100111320222212310120011002000310121255
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MMSAPKITFIGAGSTIFVKNILGDVFHREALKTAHIALMDIDPTRLEESHIVVRKLMDSAGASGKITCHTQQKEALEDADFVVVAFQIGGYEPCTVTDFEVCKRHGLEQTIADTLGPGGIMRALRTIPHLWQICEDMTEVCPDATMLNYVNPMAMNTWAMYARYPHIKQVGLCHSVQGTAEELARDLNIDPATLRYRCAGINHMAFYLELERKTADGSYVNLYPELLAAYEAGQAPKPNIHGNTRCQNIVRYEMFKKLGYFVTESSEHFAEYTPWFIKPGREDLIERYKVPLDEYPKRCVEQLANWHKELEEYKKASRIDIKPSREYASTIMNAIWTGEPSVIYGNVRNDGLIDNLPQGCCVEVACLVDANGIQPTKVGTLPSHLAALMQTNINVQTLLTEAILTENRDRVYHAAMMDPHTAAVLGIDEIYALVDDLIAAHGDWLPGWLHR
1	MUSTER	1up6A	0.197	0.900	2.771	threading_1	----HRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKD---RFKVLISDTFEGAVVDAKYVIFQFRPGGLKGRE-NDEGIPLKYGL--IGQETTGVGGFSAALRAFPIVEEYVDTVRKT-SNATIVNFTNPSGHITEFVRNYLEYEKFIGLCNVPINFIREIAEF-SARLEDVFLKYYGLNHLSFIEKVFVKGED-----VTEKVFENLKLKLPDED-----------FPTWFYDSVRLIVNP-------YLRYYLEKKFKKISTH---ELRAREVKIEKELFEKYRTAVEIPEELTKRGGSYSTAAAHLIRDLETDEGKIHIVNTRNNGSIENLPDDYVLEIPCYVRSGRVHTLSQGKGD-HFALSFIHAVKYERLTIEAYLKRSKKLALKALLSHPLGPDV---EDAKDLLEEILEANREYVKLG---
2	SPARKS	1up6a	0.204	0.880	6.210	threading_2	----HRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLV---KDRFKVLISDTFEGAVVDAKYVIFQFRPGGLKGRE-NDEGIPLKYGL--IGQETTGVGGFSAALRAFPIVEEYVDTVRK-TSNATIVNFTNPSGHITEFVRNYLEYEKFIGLCNVPINFIREIAE-FSARLEDVFLKYYGLNHLSFIEKVFVKGED-----VTEKVFENLKLKLPDED-----------FPTWFYDSVRLIVN-------PYLRYYLEKKFKKIS--------THELRAREV--KIEKELFEKYRTATKRGGSYSTAAAHLIRDLETDEGKIHIVNTRNNGSIENLPDDYVLEIPCYVRSGRVHTLSQGKGDHFALSFIHAV-KYERLTIEAYLKRSKKLALKALLSHPLGPDV---EDAKDLLEEILEANREYV-----K
3	PROSPECT2	3fefA	0.230	0.925	4.145	threading_3	L-DQIKIAYIGGGSQGWARSLSDLSI---DERSGTVALYDLDFEAAQKNEVIGN---HSGNGRWRYEAVSTLKKALSAADIVIISILPGSLDD--EVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTNPSVCTRVLYKV-FPGIKAIGCCHEVFGTQKLLAEVTVPRREDIRVNVLGINHFTWITKASYRHID--LLPIFREFSAHYGESGYELEGECWRDCSAHRVAFDLFETYGAIPAAG----DRHLAEFLPGPYLKQPEVWKFHLTPISFRKQDRAEKRQETERLIVQQRGVAEKASGEEGVNIIAALLGLGE-LVTNVNPNQGQVLNLPIQAIVETNAFITRNRVQPILSGALPKGVELAA-RHISNQEAVADAGLTKDTGLAFQAFLNDPLVQI--DRSDAEQLFNDL--------------
4	PPA-I	1up6A	0.197	0.900	4.066	threading_4	----HRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVK---DRFKVLISDTFEGAVVDAKYVIFQFRPGGLKGRE-NDEGIPLKYGLI--GQETTGVGGFSAALRAFPIVEEYVDTVRKT-SNATIVNFTNPSGHITEFVRNYLEYEKFIGLCNVPINFIREIAEF-SARLEDVFLKYYGLNHLSFIEKVFVKGED-----VTEKVFENLKLKLPDEDFP-----------TWFYDSVRLIVNP-------YLRYYLEKK---FKKISTHELRAREVKIEKELFEKYRTAVEIPEELTKRGGSYSTAAAHLIRDLETDEGKIHIVNTRNNGSIENLPDDYVLEIPCYVRSGRVHTLSQGKGD-HFALSFIHAVKYERLTIEAYLKRSKKLALKALLSHPLGPDVED---AKDLLEEILEANREYVKLG---
5	HHPRED-l	1u8x_X	0.240	0.907	4.478	threading_5	-KKSFSIVIAGGGSTFTPGIVL-LLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFV-AHIRVGKYA--RALDEQIPLKYGV--VGQETCGPGGIAYG-RSIGGVLEILDY-EKYSPDAW-LNYSNPAAIVAEATRRLRPNSKILNICD-PVGIEDR-AQILGLSRKE-KVRYYGLNHFGWWTSIQQEGND-----L-PKLKEHVSQYGIPKT----------SWNDTFAKARDVQAADPDTLPNTYLQYYLFP--DD-VKKSNPNHT-RANEV-EGRFSQCD-IEQSSENSEIKIDDHASYIVDLARAIAYNTGER-LLIVENNGAIANFDPTA-VEVPCIVGSNGPEPITVGTIPQFQKGL-EQQVSVEKLTVEAWAEKSFQKLWQALILSKTVPNA---RVARLILEDLVEANKDFWPELDQ-
6	HHPRED-g	1u8x_X	0.233	0.905	5.171	threading_6	--KSFSIVIAGGGSTFTPGIVL-LLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFV-AHIRVGKYA--RALDEQIPLKYGV--VGQETCGPGGIAYG-RSIGGVLEILDY-EKYSPDAW-LNYSNPAAIVAEATRRLRPNSKILNICD-PVGIEDR-AQILGLSRKE-KVRYYGLNHFGWWTSIQQEGN-----DL-PKLKEHVSQYGYIPK--T-------SWNDTFAKARDVQAADPDTLPNTYLQYYLFP--DD-VKKSN----PNHTRANEV-EGREAFIFSQCENSEIKIDDHASYIVDLARAIAYNTGER-LLIVENNGAIANFDPTA-VEVPCIVGSNGPEPITVGTIPQFQKGL-EQQVSVEKLTVEAWAEKSFQKLWQALILSKTVPN---ARVARLILEDLVEANKDFWPELDQS
7	SP3	1up6a	0.204	0.880	6.491	threading_7	----HRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKD---RFKVLISDTFEGAVVDAKYVIFQFRPGGLKGRE-NDEGIPLKYGL--IGQETTGVGGFSAALRAFPIVEEYVDTVRK-TSNATIVNFTNPSGHITEFVRNYLEYEKFIGLCNVPINFIREIAE-FSARLEDVFLKYYGLNHLSFIEKVFVKGED-----VTEKVFENLKLKLPDED-----------FPTWFYDSVRLIVN-------PYLRYYLEKKFKKIS--------THELRAREVK--IEKELFEKYRTAVEIPEEYSTAAAHLIRDLETDEGKIHIVNTRNNGSIENLPDDYVLEIPCYVRSGRVHTLSQGKGDHFALSFIHAVK-YERLTIEAYLKRSKKLALKALLSHPLGPDV---EDAKDLLEEILEANREYV-----K
8	SAM-T99	1s6yA	0.261	0.882	5.770	threading_8	---RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEEKLEIVGALAKRV-EKAGVPIEIHLTLDRRRALDGADFVTTQFRVGGLEA-RAKDERIPLKYGV--IGQETNGPGGLFKGLRTIPVILDIIRD-EELCPDAWLINFTNPAG-VTEAVLRYTKQEKVVGLCNVPIG--RGVAKLLGVDADRVHIDFAGLNH-VFGLHVYL-----DGVEVTEKVIDLVA-----------HPLGWEP---DFLKGLKVLPCPYHRYYFQT----DKLAEELEAAKTKGTRAEVVQQLEKELFELYK----------RGGAYYSDAACSLISSIYNDKRDIQPVNTRNNGAIASISAESAVEVNCVITKDGPKPIAVGDLPVAVRGLVQQIKSFERVAAEAAVTGDYQTALVA-TINPLVPSD---TIAKQILDEL-EAHKEYLPQF---
9	MUSTER	1s6yA	0.266	0.894	2.704	threading_9	---RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPKEKLEIVGALAKRV-EKAGVPIEIHLTLDRRRALDGADFVTTQFRVGGLEARA-KDERIPLKYGV--IGQETNGPGGLFKGLRTIPVILDIIRDE-ELCPDAWLINFTNPAG-VTEAVLRYTKQEKVVGLCNVPIG--RGVAKLLGVDADRVHIDFAGLNHV-FGLHVYLDGVE-----VTEKVIDLVAHPLGWE--------------PDFLKGLKVLPCPYHRY------YFQTDKLAEELEAAKTKGT-----RAEVVQQLEKELFELYKDPR-GGAYYSDAACSLISSIYNDKRDIQPVNTRNNGAIASISAESAVEVNCVITKDGPKPIAVGDLPVAVRGLVQQIKSFERVAAEAAVTGDYQTALVAT-INPLVPS---DTIAKQILDEL-EAHKEYLPQFFKQ
10	SPARKS	1s6ya	0.263	0.894	6.183	threading_10	---RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPKEKLEIVGALAKRVEK-AGVPIEIHLTLDRRRALDGADFVTTQFRVGGLEARA-KDERIPLKYGV--IGQETNGPGGLFKGLRTIPVILDIIRD-EELCPDAWLINFTNPAGV-TEAVLRYTKQEKVVGLCNVPIG--RGVAKLLGVDADRVHIDFAGLNHV-FGLHVYLDGVE-----VTEKVIDLVAHPLGWE--------------PDFLKGLKVLPC-------PYHRYYFQT---DKLAEELEAAKTKGT-RAEVVQQLEKELFELYKDPR-GGAYYSDAACSLISSIYNDKRDIQPVNTRNNGAIASISAESAVEVNCVITKDGPKPIAVGDLPVAVRGLVQQIKSFERVAAEAAVTGDYQTALVATI-NPLVPS---DTIAKQILDELE-AHKEYLPQFFKQ

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.942 to 1up6A SCOP code=c.2.1.5	TM-score=0.942 to 1up6A SCOP code=c.2.1.5	TM-score=0.923 to 1up6A SCOP code=c.2.1.5	TM-score=0.830 to 1u8xX SCOP code=c.2.1.5	TM-score=0.944 to 1up6A SCOP code=c.2.1.5