Template-based Modeling Results for DHNA_ECOLI

Submitted Primary Sequence

>Length 434
MTTPLKKIVIVGGGAGGLEMATQLGHKLGRKKKAKITLVDRNHSHLWKPLLHEVATGSLDEGVDALSYLAHARNHGFQFQLGSVIDIDREAKTITIAELRDEKGELLVPERKIAYDTLVMALGSTSNDFNTPGVKENCIFLDNPHQARRFHQEMLNLFLKYSANLGANGKVNIAIVGGGATGVELSAELHNAVKQLHSYGYKGLTNEALNVTLVEAGERILPALPPRISAAAHNELTKLGVRVLTQTMVTSADEGGLHTKDGEYIEADLMVWAAGIKAPDFLKDIGGLETNRINQLVVEPTLQTTRDPDIYAIGDCASCPRPEGGFVPPRAQAAHQMATCAMNNILAQMNGKPLKNYQYKDHGSLVSLSNFSTVGSLMGNLTRGSMMIEGRIARFVYISLYRMHQIALHGYFKTGLMMLVGSINRVIRPRLKLH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTTPLKKIVIVGGGAGGLEMATQLGHKLGRKKKAKITLVDRNHSHLWKPLLHEVATGSLDEGVDALSYLAHARNHGFQFQLGSVIDIDREAKTITIAELRDEKGELLVPERKIAYDTLVMALGSTSNDFNTPGVKENCIFLDNPHQARRFHQEMLNLFLKYSANLGANGKVNIAIVGGGATGVELSAELHNAVKQLHSYGYKGLTNEALNVTLVEAGERILPALPPRISAAAHNELTKLGVRVLTQTMVTSADEGGLHTKDGEYIEADLMVWAAGIKAPDFLKDIGGLETNRINQLVVEPTLQTTRDPDIYAIGDCASCPRPEGGFVPPRAQAAHQMATCAMNNILAQMNGKPLKNYQYKDHGSLVSLSNFSTVGSLMGNLTRGSMMIEGRIARFVYISLYRMHQIALHGYFKTGLMMLVGSINRVIRPRLKLH
CCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEECCCHHHHHCCCCCHHHEEEEHHHHHHHCCEEEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCEEECCEEEECCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCEEEEEECCEEEECCCCEEECCEEEECCCCCCCHHHHHCCCCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTTPLKKIVIVGGGAGGLEMATQLGHKLGRKKKAKITLVDRNHSHLWKPLLHEVATGSLDEGVDALSYLAHARNHGFQFQLGSVIDIDREAKTITIAELRDEKGELLVPERKIAYDTLVMALGSTSNDFNTPGVKENCIFLDNPHQARRFHQEMLNLFLKYSANLGANGKVNIAIVGGGATGVELSAELHNAVKQLHSYGYKGLTNEALNVTLVEAGERILPALPPRISAAAHNELTKLGVRVLTQTMVTSADEGGLHTKDGEYIEADLMVWAAGIKAPDFLKDIGGLETNRINQLVVEPTLQTTRDPDIYAIGDCASCPRPEGGFVPPRAQAAHQMATCAMNNILAQMNGKPLKNYQYKDHGSLVSLSNFSTVGSLMGNLTRGSMMIEGRIARFVYISLYRMHQIALHGYFKTGLMMLVGSINRVIRPRLKLH
56332210000000000010012003312443301000013121111201011000021232100010121033210200101011012422102012233332321133220100000000002111220310320002022031022013201200231223222323010000000110020001002002200221132113320100002003300220223002101310241212000212021023210103322202010000000030130022022132242210101310312412100000000002223212112201002200100020001212233133121312000000012200010112213120001000000000000001000010001000100010013212221234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTTPLKKIVIVGGGAGGLEMATQLGHKLGRKKKAKITLVDRNHSHLWKPLLHEVATGSLDEGVDALSYLAHARNHGFQFQLGSVIDIDREAKTITIAELRDEKGELLVPERKIAYDTLVMALGSTSNDFNTPGVKENCIFLDNPHQARRFHQEMLNLFLKYSANLGANGKVNIAIVGGGATGVELSAELHNAVKQLHSYGYKGLTNEALNVTLVEAGERILPALPPRISAAAHNELTKLGVRVLTQTMVTSADEGGLHTKDGEYIEADLMVWAAGIKAPDFLKDIGGLETNRINQLVVEPTLQTTRDPDIYAIGDCASCPRPEGGFVPPRAQAAHQMATCAMNNILAQMNGKPLKNYQYKDHGSLVSLSNFSTVGSLMGNLTRGSMMIEGRIARFVYISLYRMHQIALHGYFKTGLMMLVGSINRVIRPRLKLH
1	MUSTER	3hyxA	0.166	0.915	2.322	threading_1	----AKHVVVIGGGVGGIATAYNLRNLMP---DLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESIDPDANTVTT-----QSGK------KIEYDYLVIATGPKL-VFGAEGQEENSTSICTAEHALETQKKLQELYANPGP---------VVIGAIPGVSFGPAYEFALMLHYELKK--RGIR-YKVPMTFITSEPYLGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEPDKVIYEDLNEVPAKFTMFMPSFQGPEVVASAGKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPVPKTGMMIEQMAMAVAHNIVNDIRNNPDKYAPRLSAICIADFGEDAGFFFADPVIPPREITKMGKWAHYFKTAFEKYFLWKVRNGNIAP--SFEEKVLEI----LKVH
2	SPARKS	3hyva	0.159	0.926	3.662	threading_2	----AKHVVVIGGGVGGIATAYNLRNLM---PDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQS-----------GKKIEYDYLVIATGPKL-VFGAEGQEENSTSICTAEHALETQKKLQELYA---------NPGPVVIGAIPGVSFGPAYEFALMLHYELKK---RGIRYKVPMTFITSEPYLGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEPDKVIYENGNEVPAKFTMFMPSFQGPEVVASAGDVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPVPKTGMMIEQMAMAVAHNIVNDIRNNPDK-YAPRLSACIADFGEDAGFFFADPVIPPREITKMGKWAHYFKTAFEKYFLWKVRNGNIAFEEKVLEIFLKVHPIELCKD
3	PROSPECT2	3hyvA	0.156	0.929	4.708	threading_3	----AKHVVVIGGGVGGIATAYNLRNLM---PDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESIDPDANTVTT-----------QSGKKIEYDYLVIATGPKL-VFGAEGQEENSTSICTAEHALETQKKLQELYA---------NPGPVVIGAIPGVSFGPAYEFALMLHYELKK---RGIRYKVPMTFITSEPYLGHFGVGASKRLVEDLFAERNIDWIANVAVKAIEPDKVIYEDLNEVPAKFTMFMPSFQGPEVVASAGKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTGVPKTGMMIEQMAMAVAHNIVNDIRNNPDKYAPRLSAICIADFGEDAGFFFADPVIPPRERVIMGKWAHYFKTAFEKYFLWKVRNGNIAPSFEEKVLEIFLKVHPIELC
4	PPA-I	3hyxA	0.154	0.929	3.937	threading_4	----AKHVVVIGGGVGGIATAYNLRNLMP---DLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQS-----------GKKIEYDYLVIATGPKL-VFGAEGQEENSTSICTAEHALETQKKLQELYAN---------PGPVVIGAIPGVSFGPAYEFALMLHYELKKRGIR---YKVPMTFITSEPYLGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEPDKVIYEDLNEVPAKFTMFMPSFQGPEVVASAGKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPVPKTGMMIEQMAMAVAHNIVNDIRNNPDKYAPRLSAICIADFGEDAGFFFADPVIPPREITKMGKWAHYFKTAFEKYFLWKVRNGNIAPSFEEKVLEIFLKVHPIELC
5	HHPRED-l	3kpk_A	0.176	0.892	2.099	threading_5	----MAHVVILGAGTGGMPAAYEMKEALG--SGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIAQSAEQIDAEAQNITL-----------ADGNTVHYDYLMIATGPKLAFENVPGSDPPVQSICTVDHAERAFAEYQALLR---------EPG-PIVIGAMAGAYEYAMIVASDLKKR-------GMRDKIPFTFITSEPYIGHQGVGDSKGILTKGLKEEGIEAYTNCKVTKVEDNKMYVTQEMVLPVKFGMMIPAFKGVPAVAGVEGL-CNPGGFVLVDEHQRSKKYANIFAAGIAIAIPPVETTGAPKTGYMIESMVSAAVHNIKADLEGRKGEQTMGTWNVCFADMGDRGAAFI-ALPQLKPDVFAYGRWVHLAKVAFEKYFIRKMMGVS---EPFYEKVLFK----M----
6	HHPRED-g	3kpk_A	0.194	0.892	2.082	threading_6	----MAHVVILGAGTGGMPAAYEMKEALGS--GHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIAQSAEQIDAEAQNITLA-----DG------NTVHYDYLMIATGPKLAFENVPGSDPPVQSICTVDHAERAFAEYQ-ALLR-----EP-G--PI-VIGAMAGAYEYAMIVASDLKK---RGMR----DKIPFTFITSEPYIGHQGVGDSKGILTKGLKEEGIEAYTNCKVTKVEDNKMYVTQEMVLPVKFGMMIPAFKGVPAVAGVEGL-CNPGGFVLVDEHQRSKKYANIFAAGIAIAIPPVETTGAPKTGYMIESMVSAAVHNIKADLEGKGEQTMGTWNAVCFADMGDRGAAFI-ALPQLKVDVFAYGRWVHLAKVAFEKYFIRMKMGVS-------EPFYEKVLFKM----
7	SP3	3hyva	0.165	0.924	3.846	threading_7	----AKHVVVIGGGVGGIATAYNLRNLMP---DLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQS-----------GKKIEYDYLVIATGPK-LVFGAEGQEENSTSICTAEHALETQKKLQELYANPG-----------PVVIGAIPGVSF-GPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEPDKVIYENTHEVPAKFTMFMPSFQGPEVVASAGDVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPVPKTGMMIEQMAMAVAHNIVNDIRNNPD-KYAPRLSACIADFGEDAGFFFADPVIPPREITKMGKWAHYFKTAFEKYFLWKVRNIAPSFEEKVLEIFLK-VHPIELCK
8	SAM-T99	1xhcA	0.267	0.793	2.761	threading_8	-----SKVVIVGNGPGGFELAKQL------SQTYEVTVIDKEPVPYYKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRLAEAKLIDRGRKVVITEKG------------EVPYDTLVLATGARAREPQIKG-KEYLLTLRTIFDADRIKESIENS-------------GEAIIIGGGFIGLELAGNLAE---------------AGYHVKLIHRGAMFL-GLDEELSNMIKDMLEETGVKFFLNSELLEANEEGVLTNS-GFIEGKVKICAIGIVPNVDLARRSGIHTGR--GILIDDNFRT-SAKDVYAIGDCAEYSG----IIAGTAKAAMEQARVLADIL----KGEPRR-YNFKFRSTVFKFGKLQ-IAIIGNTKGEGKWIEDNTKVFYIGAVVFND-----------------------IRKATKLE
9	MUSTER	3h8iA	0.194	0.797	2.186	threading_9	-----TKVLVLGGRFGALTAAYTLKRLVGS--KADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEGTVEKIDAKSSMVYYT---KPDGSM----AEEEYDYVIVGIGAHLATELVKGWDKYGYSVCEPEFATKLREKLESFSGPFYQGHNPKPKVPENFVPNADSAEGPVFEMSLMLHGYFKK--KGML-DKVHVTVFSPGE-YLSDLSPNSRKAVASIYNQLGIKLVHNFKIKEIREHEIVDEKGNTIPADITILLPPYTGNPALKNSTPDLVDDGGFIPTDLNMVSIKYDNVYAVGDANSM------TVPKLGYLAVMTGRIAAQHLANRL-GVPTKVDKYYPTIVVADNPYE---------------------------------------------------------------
10	SPARKS	3h8ia	0.202	0.788	3.552	threading_10	-----TKVLVLGGRFGALTAAYTLKRLVG--SKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEGTVEKIDAKSSMVYYTKPDGS-------MAEEEYDYVIVGIGAHLATELVKGWDKYGYSVCEPEFATKLREKLESFQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKK------KGML-DKVHVTVFSPGE-YLSDLSPNSRKAVASIYNQLGIKLVHNFKIKEIREHEIVDEKGNTIPADITILLPPYTGNPALKNSTPDLVDDGGFIPTDLNMVSIKYDNVYAVGDANSM------TVPKLGYLAVMTGRIAAQHLANRL-GVPTKVDKYYPTIVVADNPYE---------------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.791 to 1fcdA SCOP code=c.3.1.5	TM-score=0.791 to 1fcdA SCOP code=c.3.1.5	TM-score=0.792 to 1fcdA SCOP code=c.3.1.5	TM-score=0.795 to 1fcdA SCOP code=c.3.1.5	TM-score=0.796 to 1fcdA SCOP code=c.3.1.5