Template-based Modeling Results for PABA_ECOLI

Submitted Primary Sequence

>Length 187
MILLIDNYDSFTWNLYQYFCELGADVLVKRNDALTLADIDALKPQKIVISPGPCTPDEAGISLDVIRHYAGRLPILGVCLGHQAMAQAFGGKVVRAAKVMHGKTSPITHNGEGVFRGLANPLTVTRYHSLVVEPDSLPACFDVTAWSETREIMGIRHRQWDLEGVQFHPESILSEQGHQLLANFLHR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MILLIDNYDSFTWNLYQYFCELGADVLVKRNDALTLADIDALKPQKIVISPGPCTPDEAGISLDVIRHYAGRLPILGVCLGHQAMAQAFGGKVVRAAKVMHGKTSPITHNGEGVFRGLANPLTVTRYHSLVVEPDSLPACFDVTAWSETREIMGIRHRQWDLEGVQFHPESILSEQGHQLLANFLHR
CEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCEEEECCCCCCHHHCCCHHHHHHHHCCCCCEEEECHHHHHHHHHHCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEECCCEEEEEEECCCCEEEEEECCHHHCCCCHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MILLIDNYDSFTWNLYQYFCELGADVLVKRNDALTLADIDALKPQKIVISPGPCTPDEAGISLDVIRHYAGRLPILGVCLGHQAMAQAFGGKVVRAAKVMHGKTSPITHNGEGVFRGLANPLTVTRYHSLVVEPDSLPACFDVTAWSETREIMGIRHRQWDLEGVQFHPESILSEQGHQLLANFLHR
2000000110000000100131212020111121212102312121000010110043010012002201330000000000100030020200202311201002010123100310222020000000002343022001000102321000010232201000001110113202200111155
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MILLIDNYDSFTWNLYQYFCELGADVLVKRNDALTLADIDALKPQKIVISPGPCTPDEAGISLDVIRHYAGRLPILGVCLGHQAMAQAFGGKVVRAAKVMHGKTSPITHNGEGVFRGLANPLTVTRYHSLVVEPDSLPACFDVTAWSETREIMGIRHRQWDLEGVQFHPESILSEQGHQLLANFLHR
1	MUSTER	1qdlB	0.478	0.995	4.698	threading_1	LTLIIDNYDSFVYNIAQIVGELGSYPIVIRNDEISIKGIERIDPDRLIISPGPGTPEDIGVSLDVIKYLGKRTPILGVCLGHQAIGYAFGAKIRRARKVFHGKISNIILSPLSLYYGIAKEFKATRYHSLVVDEVHRPLIVDAISA-EDNEIMAIHHEEYPIYGVQFHPESVGTSLGYKILYNFLNR
2	SPARKS	2a9va	0.315	0.968	4.668	threading_2	KIYVVDNGGQWTHREWRVLRELGVDTKIVPND-IDSSEL--DGLDGLVLSGGAPNIDEELDKLGSVGKYIDNYPILGICVGAQFIALHFGASVVKAKHPEFGKTKVSVH-SENIFGGLPSEITVWENHNDEII--NLPDDFTLAASSATCQVQGFYHKTRPIYATQFHPEVEHTQYGRDIFRNFIGI
3	PROSPECT2	1i7qb	0.440	0.984	4.468	threading_3	DILLLDNVDSFTYNLVDQLRASGHQVVIYRNQEVIIERLQHMEQPVLMLSPGPGTPSEAGCMPELLQRLRGQLPIIGICLGHQAIVEAYGGQVGQAGEILHGKASAIAHDGEGMFAGMANPLPVARYHSLVGS--NIPADLTVNARF-GEMVMAVRDDRRRVCGFQFHPESILTTHGARLLEQTLAK
4	PPA-I	1qdlB	0.478	0.995	8.501	threading_4	LTLIIDNYDSFVYNIAQIVGELGSYPIVIRNDEISIKGIERIDPDRLIISPGPGTPEDIGVSLDVIKYLGKRTPILGVCLGHQAIGYAFGAKIRRARKVFHGKISNIILSPLSLYYGIAKEFKATRYHSLVVDEVHRPLIVDAISA-EDNEIMAIHHEEYPIYGVQFHPESVGTSLGYKILYNFLNR
5	HHPRED-l	1gpm_A	0.270	0.989	3.361	threading_5	RILILDFGSQYTQLVARRVRELGVYCELWAWD-VTEAQIRDFNPSGIILSGGPESTTEENSPRAPQYVFEAGVPVFGVCYGMQTMAMQLGGHVEASNEREFGYAQVEVVNDSALVRGIEDALTLDVWMSHGDKVTAIPSDFITVASTESCPFAIMANEEKRFYGVQFHPEVTHTRQGMRMLERFVR-
6	HHPRED-g	1i1q_B	0.438	0.952	3.709	threading_6	DILLLDNIDSFTWNLADQLRTNGHNVVIYRNHQTLIDRLATMKNPVLMLSPGPGVPSEAGCMPELLTRLRGKLPIIGICLGHQAIVEAYGGYVGQ---ILHGKATSIEHDGQAMFAGLANPLPVARYHS---S--NVPAGLTINAHF-NGMVMAVRHDADRVCGFQFHPESILTTQGARLLEQTLAW
7	SP3	1wl8a	0.330	0.973	4.314	threading_7	MIVIMDNGGQYVHRIWRTLRYLGVETKIIPNT-TPLEEIKAMNPKGIIFSGGPSLENTGNCEKVLEHYDEFNVPILGICLGHQLIAKFFGGKVGRGEKAEYS-LVEIEIIDEEIFKGLPKRLKVWESHMDEV--KELPPKFKILARS-ETPIEAMKHEELPIYGVQFHPEVAHTEKGEEILRNFAKL
8	SAM-T99	1qdlB	0.495	0.984	6.161	threading_8	MTLIIDNYDSFVYNIAQIVGELGSYPIVIRNDEISIKGIERIDPDRLIISPGPGTPEDIGVSLDVIKYLGKRTPILGVCLGHQAIGYAFGAKIRRARKVFHGKISNIILVNNSLYYGIAKEFKATRYHSLVVDEVHRP--LIVDAISEDNEIMAIHHEEYPIYGVQFHPESVGTSLGYKILYNFLN-
9	MUSTER	1i7sB	0.440	0.984	4.678	threading_9	DILLLDNVDSFTYNLVDQLRASGHQVVIYRNQEVIIERLQHMEQPVLMLSPGPGTPSEAGCMPELLQRLRGQLPIIGICLGHQAIVEAYGGQVGQAGEILHGKASAIAHDGEGMFAGMANPLPVARYHSLVGS--NIPADLTVNARFGE-MVMAVRDDRRRVCGFQFHPESILTTHGARLLEQTLAK
10	SPARKS	1wl8a	0.330	0.973	4.616	threading_10	MIVIMDNGGQYVHRIWRTLRYLGVETKIIPNT-TPLEEIKAMNPKGIIFSGGPSLENTGNCEKVLEHYDEFNVPILGICLGHQLIAKFFGGKVGRGEKAEYS-LVEIEIIDEEIFKGLPKRLKVWESHMDEV--KELPPKFKILARS-ETPIEAMKHEELPIYGVQFHPEVAHTEKGEEILRNFAKL

Predicted Tertiary Structure


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TM-score=0.970 to 1qdlB SCOP code=c.23.16.1	TM-score=0.964 to 1i7sB SCOP code=c.23.16.1	TM-score=0.932 to 2a9vD SCOP code=c.23.16.1	TM-score=0.922 to 1i7sB SCOP code=c.23.16.1	TM-score=0.970 to 1qdlB SCOP code=c.23.16.1