SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    200001 3wtt:C (2.35) BS02 dna ? GO:0003700 ... P14921 25083921
    200002 3wtt:F (2.35) BS01 dna ? GO:0003677 ... Q03347 25083921
    200003 3wtt:F (2.35) BS02 dna ? GO:0003677 ... Q03347 25083921
    200004 3wtt:H (2.35) BS01 dna ? GO:0003700 ... P14921 25083921
    200005 3wtt:H (2.35) BS02 dna ? GO:0003700 ... P14921 25083921
    200006 3wtu:A (2.7) BS01 dna ? GO:0003677 ... Q03347 25083921
    200007 3wtu:A (2.7) BS02 dna ? GO:0003677 ... Q03347 25083921
    200008 3wtu:C (2.7) BS01 dna ? GO:0003700 ... P14921 25083921
    200009 3wtu:C (2.7) BS02 dna ? GO:0003700 ... P14921 25083921
    200010 3wtu:F (2.7) BS01 dna ? GO:0003677 ... Q03347 25083921
    200011 3wtu:F (2.7) BS02 dna ? GO:0003677 ... Q03347 25083921
    200012 3wtu:H (2.7) BS01 dna ? GO:0003700 ... P14921 25083921
    200013 3wtu:H (2.7) BS02 dna ? GO:0003700 ... P14921 25083921
    200014 3wtv:A (2.7) BS01 dna ? GO:0003677 ... Q03347 25083921
    200015 3wtv:A (2.7) BS02 dna ? GO:0003677 ... Q03347 25083921
    200016 3wtv:C (2.7) BS01 dna ? GO:0003700 ... P14921 25083921
    200017 3wtv:C (2.7) BS02 dna ? GO:0003700 ... P14921 25083921
    200018 3wtv:F (2.7) BS01 dna ? GO:0003677 ... Q03347 25083921
    200019 3wtv:F (2.7) BS02 dna ? GO:0003677 ... Q03347 25083921
    200020 3wtv:H (2.7) BS01 dna ? GO:0003700 ... P14921 25083921
    200021 3wtv:H (2.7) BS02 dna ? GO:0003700 ... P14921 25083921
    200022 3wtw:A (2.9) BS01 dna ? GO:0003677 ... Q03347 25083921
    200023 3wtw:A (2.9) BS02 dna ? GO:0003677 ... Q03347 25083921
    200024 3wtw:C (2.9) BS01 dna ? GO:0003700 ... P14921 25083921
    200025 3wtw:C (2.9) BS02 dna ? GO:0003700 ... P14921 25083921
    200026 3wtw:F (2.9) BS01 dna ? GO:0003677 ... Q03347 25083921
    200027 3wtw:F (2.9) BS02 dna ? GO:0003677 ... Q03347 25083921
    200028 3wtw:H (2.9) BS01 dna ? GO:0003700 ... P14921 25083921
    200029 3wtw:H (2.9) BS02 dna ? GO:0003700 ... P14921 25083921
    200030 3wtx:A (2.8) BS01 dna ? GO:0003677 ... Q03347 25083921
    200031 3wtx:A (2.8) BS02 dna ? GO:0003677 ... Q03347 25083921
    200032 3wtx:C (2.8) BS01 dna ? GO:0003700 ... P14921 25083921
    200033 3wtx:C (2.8) BS02 dna ? GO:0003700 ... P14921 25083921
    200034 3wtx:F (2.8) BS01 dna ? GO:0003677 ... Q03347 25083921
    200035 3wtx:F (2.8) BS02 dna ? GO:0003677 ... Q03347 25083921
    200036 3wtx:H (2.8) BS01 dna ? GO:0003700 ... P14921 25083921
    200037 3wtx:H (2.8) BS02 dna ? GO:0003700 ... P14921 25083921
    200038 3wty:A (2.7) BS01 dna ? GO:0003677 ... Q03347 25083921
    200039 3wty:A (2.7) BS02 dna ? GO:0003677 ... Q03347 25083921
    200040 3wty:C (2.7) BS01 dna ? GO:0003700 ... P14921 25083921
    200041 3wty:C (2.7) BS02 dna ? GO:0003700 ... P14921 25083921
    200042 3wty:F (2.7) BS01 dna ? GO:0003677 ... Q03347 25083921
    200043 3wty:F (2.7) BS02 dna ? GO:0003677 ... Q03347 25083921
    200044 3wty:H (2.7) BS01 dna ? GO:0003700 ... P14921 25083921
    200045 3wty:H (2.7) BS02 dna ? GO:0003700 ... P14921 25083921
    200046 3wu1:A (2.4) BS01 dna ? GO:0003677 ... Q03347 25083921
    200047 3wu1:A (2.4) BS02 dna ? GO:0003677 ... Q03347 25083921
    200048 3wu1:B (2.4) BS01 dna ? GO:0003700 ... P14921 25083921
    200049 3wu1:B (2.4) BS02 dna ? GO:0003700 ... P14921 25083921
    200050 3wu2:A (1.9) BS01 OEX 1.10.3.9 GO:0005506 ... P51765 21499260
    200051 3wu2:A (1.9) BS02 FE2 1.10.3.9 GO:0005506 ... P51765 21499260
    200052 3wu2:A (1.9) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 21499260
    200053 3wu2:A (1.9) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 21499260
    200054 3wu2:A (1.9) BS05 CLA 1.10.3.9 GO:0005506 ... P51765 21499260
    200055 3wu2:A (1.9) BS06 PHO 1.10.3.9 GO:0005506 ... P51765 21499260
    200056 3wu2:A (1.9) BS07 PHO 1.10.3.9 GO:0005506 ... P51765 21499260
    200057 3wu2:A (1.9) BS08 CLA 1.10.3.9 GO:0005506 ... P51765 21499260
    200058 3wu2:A (1.9) BS09 CLA 1.10.3.9 GO:0005506 ... P51765 21499260
    200059 3wu2:A (1.9) BS10 BCT 1.10.3.9 GO:0005506 ... P51765 21499260
    200060 3wu2:B (1.9) BS01 CLA ? GO:0009521 ... D0VWR1 21499260
    200061 3wu2:B (1.9) BS02 CLA ? GO:0009521 ... D0VWR1 21499260
    200062 3wu2:B (1.9) BS03 CLA ? GO:0009521 ... D0VWR1 21499260
    200063 3wu2:B (1.9) BS04 CLA ? GO:0009521 ... D0VWR1 21499260
    200064 3wu2:B (1.9) BS05 CLA ? GO:0009521 ... D0VWR1 21499260
    200065 3wu2:B (1.9) BS06 CLA ? GO:0009521 ... D0VWR1 21499260
    200066 3wu2:B (1.9) BS07 CLA ? GO:0009521 ... D0VWR1 21499260
    200067 3wu2:B (1.9) BS08 CLA ? GO:0009521 ... D0VWR1 21499260
    200068 3wu2:B (1.9) BS09 CLA ? GO:0009521 ... D0VWR1 21499260
    200069 3wu2:B (1.9) BS10 CLA ? GO:0009521 ... D0VWR1 21499260
    200070 3wu2:B (1.9) BS11 CLA ? GO:0009521 ... D0VWR1 21499260
    200071 3wu2:B (1.9) BS12 CLA ? GO:0009521 ... D0VWR1 21499260
    200072 3wu2:B (1.9) BS13 CLA ? GO:0009521 ... D0VWR1 21499260
    200073 3wu2:B (1.9) BS14 CLA ? GO:0009521 ... D0VWR1 21499260
    200074 3wu2:B (1.9) BS15 CLA ? GO:0009521 ... D0VWR1 21499260
    200075 3wu2:B (1.9) BS16 CLA ? GO:0009521 ... D0VWR1 21499260
    200076 3wu2:C (1.9) BS01 OEX ? GO:0005737 ... D0VWR7 21499260
    200077 3wu2:C (1.9) BS02 CLA ? GO:0005737 ... D0VWR7 21499260
    200078 3wu2:C (1.9) BS03 CLA ? GO:0005737 ... D0VWR7 21499260
    200079 3wu2:C (1.9) BS04 CLA ? GO:0005737 ... D0VWR7 21499260
    200080 3wu2:C (1.9) BS05 CLA ? GO:0005737 ... D0VWR7 21499260
    200081 3wu2:C (1.9) BS06 CLA ? GO:0005737 ... D0VWR7 21499260
    200082 3wu2:C (1.9) BS07 CLA ? GO:0005737 ... D0VWR7 21499260
    200083 3wu2:C (1.9) BS08 CLA ? GO:0005737 ... D0VWR7 21499260
    200084 3wu2:C (1.9) BS09 CLA ? GO:0005737 ... D0VWR7 21499260
    200085 3wu2:C (1.9) BS10 CLA ? GO:0005737 ... D0VWR7 21499260
    200086 3wu2:C (1.9) BS11 CLA ? GO:0005737 ... D0VWR7 21499260
    200087 3wu2:C (1.9) BS12 CLA ? GO:0005737 ... D0VWR7 21499260
    200088 3wu2:C (1.9) BS13 CLA ? GO:0005737 ... D0VWR7 21499260
    200089 3wu2:C (1.9) BS14 CLA ? GO:0005737 ... D0VWR7 21499260
    200090 3wu2:D (1.9) BS01 FE2 1.10.3.9 GO:0005737 ... D0VWR8 21499260
    200091 3wu2:D (1.9) BS02 CLA 1.10.3.9 GO:0005737 ... D0VWR8 21499260
    200092 3wu2:D (1.9) BS03 CLA 1.10.3.9 GO:0005737 ... D0VWR8 21499260
    200093 3wu2:D (1.9) BS04 CLA 1.10.3.9 GO:0005737 ... D0VWR8 21499260
    200094 3wu2:D (1.9) BS05 PHO 1.10.3.9 GO:0005737 ... D0VWR8 21499260
    200095 3wu2:D (1.9) BS06 PHO 1.10.3.9 GO:0005737 ... D0VWR8 21499260
    200096 3wu2:D (1.9) BS07 CLA 1.10.3.9 GO:0005737 ... D0VWR8 21499260
    200097 3wu2:D (1.9) BS08 BCT 1.10.3.9 GO:0005737 ... D0VWR8 21499260
    200098 3wu2:D (1.9) BS09 CLA 1.10.3.9 GO:0005737 ... D0VWR8 21499260
    200099 3wu2:D (1.9) BS10 CLA 1.10.3.9 GO:0005737 ... D0VWR8 21499260
    200100 3wu2:E (1.9) BS01 HEM ? GO:0005506 ... P12238 21499260
    200101 3wu2:F (1.9) BS01 HEM ? GO:0005506 ... P12239 21499260
    200102 3wu2:H (1.9) BS01 CLA ? GO:0009523 ... P19052 21499260
    200103 3wu2:H (1.9) BS02 CLA ? GO:0009523 ... P19052 21499260
    200104 3wu2:H (1.9) BS03 CLA ? GO:0009523 ... P19052 21499260
    200105 3wu2:H (1.9) BS04 RRX ? GO:0009523 ... P19052 21499260
    200106 3wu2:I (1.9) BS01 CLA ? GO:0005737 ... P12240 21499260
    200107 3wu2:J (1.9) BS01 peptide ? GO:0009523 ... Q7DGD4 21499260
    200108 3wu2:J (1.9) BS02 MG ? GO:0009523 ... Q7DGD4 21499260
    200109 3wu2:K (1.9) BS01 peptide ? GO:0005737 ... P19054 21499260
    200110 3wu2:K (1.9) BS02 CLA ? GO:0005737 ... P19054 21499260
    200111 3wu2:K (1.9) BS03 CLA ? GO:0005737 ... P19054 21499260
    200112 3wu2:O (1.9) BS01 CA ? GO:0009654 ... D0VWR2 21499260
    200113 3wu2:V (1.9) BS01 HEM ? GO:0005506 ... P0A387 21499260
    200114 3wu2:X (1.9) BS01 CLA ? GO:0009523 ... D0VWR4 21499260
    200115 3wu2:Z (1.9) BS01 peptide ? GO:0009523 ... D0VWR5 21499260
    200116 3wu2:a (1.9) BS01 OEX 1.10.3.9 GO:0005506 ... P51765 21499260
    200117 3wu2:a (1.9) BS02 FE2 1.10.3.9 GO:0005506 ... P51765 21499260
    200118 3wu2:a (1.9) BS03 BCT 1.10.3.9 GO:0005506 ... P51765 21499260
    200119 3wu2:a (1.9) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 21499260
    200120 3wu2:a (1.9) BS05 CLA 1.10.3.9 GO:0005506 ... P51765 21499260
    200121 3wu2:a (1.9) BS06 CLA 1.10.3.9 GO:0005506 ... P51765 21499260
    200122 3wu2:a (1.9) BS07 PHO 1.10.3.9 GO:0005506 ... P51765 21499260
    200123 3wu2:a (1.9) BS08 PHO 1.10.3.9 GO:0005506 ... P51765 21499260
    200124 3wu2:a (1.9) BS09 CLA 1.10.3.9 GO:0005506 ... P51765 21499260
    200125 3wu2:a (1.9) BS10 CLA 1.10.3.9 GO:0005506 ... P51765 21499260
    200126 3wu2:b (1.9) BS01 CLA ? GO:0009521 ... D0VWR1 21499260
    200127 3wu2:b (1.9) BS02 CLA ? GO:0009521 ... D0VWR1 21499260
    200128 3wu2:b (1.9) BS03 CLA ? GO:0009521 ... D0VWR1 21499260
    200129 3wu2:b (1.9) BS04 CLA ? GO:0009521 ... D0VWR1 21499260
    200130 3wu2:b (1.9) BS05 CLA ? GO:0009521 ... D0VWR1 21499260
    200131 3wu2:b (1.9) BS06 CLA ? GO:0009521 ... D0VWR1 21499260
    200132 3wu2:b (1.9) BS07 CLA ? GO:0009521 ... D0VWR1 21499260
    200133 3wu2:b (1.9) BS08 CLA ? GO:0009521 ... D0VWR1 21499260
    200134 3wu2:b (1.9) BS09 CLA ? GO:0009521 ... D0VWR1 21499260
    200135 3wu2:b (1.9) BS10 CLA ? GO:0009521 ... D0VWR1 21499260
    200136 3wu2:b (1.9) BS11 CLA ? GO:0009521 ... D0VWR1 21499260
    200137 3wu2:b (1.9) BS12 CLA ? GO:0009521 ... D0VWR1 21499260
    200138 3wu2:b (1.9) BS13 CLA ? GO:0009521 ... D0VWR1 21499260
    200139 3wu2:b (1.9) BS14 CLA ? GO:0009521 ... D0VWR1 21499260
    200140 3wu2:b (1.9) BS15 CLA ? GO:0009521 ... D0VWR1 21499260
    200141 3wu2:b (1.9) BS16 CLA ? GO:0009521 ... D0VWR1 21499260
    200142 3wu2:c (1.9) BS01 OEX ? GO:0005737 ... D0VWR7 21499260
    200143 3wu2:c (1.9) BS02 CA ? GO:0005737 ... D0VWR7 21499260
    200144 3wu2:c (1.9) BS03 CLA ? GO:0005737 ... D0VWR7 21499260
    200145 3wu2:c (1.9) BS04 CLA ? GO:0005737 ... D0VWR7 21499260
    200146 3wu2:c (1.9) BS05 CLA ? GO:0005737 ... D0VWR7 21499260
    200147 3wu2:c (1.9) BS06 CLA ? GO:0005737 ... D0VWR7 21499260
    200148 3wu2:c (1.9) BS07 CLA ? GO:0005737 ... D0VWR7 21499260
    200149 3wu2:c (1.9) BS08 CLA ? GO:0005737 ... D0VWR7 21499260
    200150 3wu2:c (1.9) BS09 CLA ? GO:0005737 ... D0VWR7 21499260
    200151 3wu2:c (1.9) BS10 CLA ? GO:0005737 ... D0VWR7 21499260
    200152 3wu2:c (1.9) BS11 CLA ? GO:0005737 ... D0VWR7 21499260
    200153 3wu2:c (1.9) BS12 CLA ? GO:0005737 ... D0VWR7 21499260
    200154 3wu2:c (1.9) BS13 CLA ? GO:0005737 ... D0VWR7 21499260
    200155 3wu2:c (1.9) BS14 CLA ? GO:0005737 ... D0VWR7 21499260
    200156 3wu2:c (1.9) BS15 CLA ? GO:0005737 ... D0VWR7 21499260
    200157 3wu2:d (1.9) BS01 FE2 1.10.3.9 GO:0005737 ... D0VWR8 21499260
    200158 3wu2:d (1.9) BS02 BCT 1.10.3.9 GO:0005737 ... D0VWR8 21499260
    200159 3wu2:d (1.9) BS03 CLA 1.10.3.9 GO:0005737 ... D0VWR8 21499260
    200160 3wu2:d (1.9) BS04 CLA 1.10.3.9 GO:0005737 ... D0VWR8 21499260
    200161 3wu2:d (1.9) BS05 PHO 1.10.3.9 GO:0005737 ... D0VWR8 21499260
    200162 3wu2:d (1.9) BS06 PHO 1.10.3.9 GO:0005737 ... D0VWR8 21499260
    200163 3wu2:d (1.9) BS07 CLA 1.10.3.9 GO:0005737 ... D0VWR8 21499260
    200164 3wu2:d (1.9) BS08 CLA 1.10.3.9 GO:0005737 ... D0VWR8 21499260
    200165 3wu2:d (1.9) BS09 CLA 1.10.3.9 GO:0005737 ... D0VWR8 21499260
    200166 3wu2:e (1.9) BS01 HEM ? GO:0005506 ... P12238 21499260
    200167 3wu2:f (1.9) BS01 HEM ? GO:0005506 ... P12239 21499260
    200168 3wu2:h (1.9) BS01 CLA ? GO:0009523 ... P19052 21499260
    200169 3wu2:h (1.9) BS02 CLA ? GO:0009523 ... P19052 21499260
    200170 3wu2:h (1.9) BS03 CLA ? GO:0009523 ... P19052 21499260
    200171 3wu2:h (1.9) BS04 RRX ? GO:0009523 ... P19052 21499260
    200172 3wu2:i (1.9) BS01 CLA ? GO:0005737 ... P12240 21499260
    200173 3wu2:j (1.9) BS01 MG ? GO:0009523 ... Q7DGD4 21499260
    200174 3wu2:k (1.9) BS01 peptide ? GO:0005737 ... P19054 21499260
    200175 3wu2:k (1.9) BS02 CLA ? GO:0005737 ... P19054 21499260
    200176 3wu2:k (1.9) BS03 CLA ? GO:0005737 ... P19054 21499260
    200177 3wu2:o (1.9) BS01 CA ? GO:0009654 ... D0VWR2 21499260
    200178 3wu2:v (1.9) BS01 HEM ? GO:0005506 ... P0A387 21499260
    200179 3wu2:x (1.9) BS01 CLA ? GO:0009523 ... D0VWR4 21499260
    200180 3wu2:z (1.9) BS01 peptide ? GO:0009523 ... D0VWR5 21499260
    200181 3wu2:z (1.9) BS02 CLA ? GO:0009523 ... D0VWR5 21499260
    200182 3wub:A (2.08) BS01 ZN 3.2.1.8 GO:0004553 ... B4XVN1 25193708
    200183 3wuc:A (1.6) BS01 GLC ? GO:0005615 ... Q91786 25804418
    200184 3wuc:A (1.6) BS02 GAL ? GO:0005615 ... Q91786 25804418
    200185 3wuc:B (1.6) BS01 GLC ? GO:0005615 ... Q91786 25804418
    200186 3wuc:B (1.6) BS02 GAL ? GO:0005615 ... Q91786 25804418
    200187 3wud:A (1.68) BS01 GLC ? GO:0005615 ... Q98UD4 25804418
    200188 3wud:A (1.68) BS02 GAL ? GO:0005615 ... Q98UD4 25804418
    200189 3wue:A (2.15) BS01 XYP 3.2.1.8 GO:0004553 ... B4XVN1 25193708
    200190 3wue:A (2.15) BS02 XYP 3.2.1.8 GO:0004553 ... B4XVN1 25193708
    200191 3wue:A (2.15) BS03 XYP 3.2.1.8 GO:0004553 ... B4XVN1 25193708
    200192 3wuf:A (2.04) BS01 ZN 3.2.1.8 GO:0004553 ... B4XVN1 25193708
    200193 3wuf:A (2.04) BS02 ZN 3.2.1.8 GO:0004553 ... B4XVN1 25193708
    200194 3wug:A (1.88) BS01 XYP 3.2.1.8 GO:0004553 ... B4XVN1 25193708
    200195 3wug:A (1.88) BS02 XYP 3.2.1.8 GO:0004553 ... B4XVN1 25193708
    200196 3wug:A (1.88) BS03 XYP 3.2.1.8 GO:0004553 ... B4XVN1 25193708
    200197 3wug:A (1.88) BS04 XYP 3.2.1.8 GO:0004553 ... B4XVN1 25193708
    200198 3wug:A (1.88) BS05 ZN 3.2.1.8 GO:0004553 ... B4XVN1 25193708
    200199 3wuh:A (2.937) BS01 ZN 2.3.1.234 GO:0000049 ... P43122 25084372
    200200 3wuh:A (2.937) BS02 AMP 2.3.1.234 GO:0000049 ... P43122 25084372

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).