SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    200201 3wuh:B (2.937) BS01 ZN 2.3.1.234 GO:0000049 ... P43122 25084372
    200202 3wuh:B (2.937) BS02 AMP 2.3.1.234 GO:0000049 ... P43122 25084372
    200203 3wui:A (1.8) BS01 HEC ? GO:0005515 ... P00004 24981551
    200204 3wup:A (1.6) BS01 ZN 2.7.7.7 N/A Q9Y253 27062441
    200205 3wur:A (1.45) BS01 O4B ? N/A Q9K0P4 25287606
    200206 3wur:A (1.45) BS02 O4B ? N/A Q9K0P4 25287606
    200207 3wur:A (1.45) BS03 O4B ? N/A Q9K0P4 25287606
    200208 3wur:A (1.45) BS04 O4B ? N/A Q9K0P4 25287606
    200209 3wur:A (1.45) BS05 O4B ? N/A Q9K0P4 25287606
    200210 3wur:B (1.45) BS01 O4B ? N/A Q9K0P4 25287606
    200211 3wur:B (1.45) BS02 O4B ? N/A Q9K0P4 25287606
    200212 3wur:B (1.45) BS03 O4B ? N/A Q9K0P4 25287606
    200213 3wur:B (1.45) BS04 O4B ? N/A Q9K0P4 25287606
    200214 3wur:B (1.45) BS05 EDO ? N/A Q9K0P4 25287606
    200215 3wus:A (2.54) BS01 ZN 3.5.4.38 GO:0008270 ... Q8IUX4 26537685
    200216 3wus:B (2.54) BS01 ZN 3.5.4.38 GO:0008270 ... Q8IUX4 26537685
    200217 3wut:A (2.301) BS01 peptide ? GO:0000281 ... Q53EZ4 26392564
    200218 3wut:B (2.301) BS01 peptide ? GO:0000281 ... Q53EZ4 26392564
    200219 3wut:D (2.301) BS01 peptide ? GO:0000281 ... Q53EZ4 26392564
    200220 3wut:E (2.301) BS01 peptide ? GO:0000281 ... Q53EZ4 26392564
    200221 3wut:G (2.301) BS01 peptide ? GO:0000281 ... Q53EZ4 26392564
    200222 3wut:H (2.301) BS01 peptide ? GO:0000281 ... Q53EZ4 26392564
    200223 3wut:J (2.301) BS01 peptide ? GO:0000281 ... Q53EZ4 26392564
    200224 3wut:K (2.301) BS01 peptide ? GO:0000281 ... Q53EZ4 26392564
    200225 3wuu:A (2.904) BS01 peptide ? GO:0000281 ... Q53EZ4 26392564
    200226 3wuu:B (2.904) BS01 peptide ? GO:0000281 ... Q53EZ4 26392564
    200227 3wuu:B (2.904) BS02 peptide ? GO:0000281 ... Q53EZ4 26392564
    200228 3wuu:D (2.904) BS01 peptide ? GO:0000281 ... Q53EZ4 26392564
    200229 3wuu:E (2.904) BS01 peptide ? GO:0000281 ... Q53EZ4 26392564
    200230 3wuu:G (2.904) BS01 peptide ? GO:0000281 ... Q53EZ4 26392564
    200231 3wuu:H (2.904) BS01 peptide ? GO:0000281 ... Q53EZ4 26392564
    200232 3wuu:J (2.904) BS01 peptide ? GO:0000281 ... Q53EZ4 26392564
    200233 3wuu:K (2.904) BS01 peptide ? GO:0000281 ... Q53EZ4 26392564
    200234 3wuu:K (2.904) BS02 peptide ? GO:0000281 ... Q53EZ4 26392564
    200235 3wuv:A (2.79) BS01 peptide ? GO:0000281 ... Q53EZ4 26392564
    200236 3wuv:B (2.79) BS01 peptide ? GO:0000281 ... Q53EZ4 26392564
    200237 3wuv:B (2.79) BS02 peptide ? GO:0000281 ... Q53EZ4 26392564
    200238 3wuv:D (2.79) BS01 peptide ? GO:0000281 ... Q53EZ4 26392564
    200239 3wuv:E (2.79) BS01 peptide ? GO:0000281 ... Q53EZ4 26392564
    200240 3wuv:G (2.79) BS01 peptide ? GO:0000281 ... Q53EZ4 26392564
    200241 3wuv:H (2.79) BS01 peptide ? GO:0000281 ... Q53EZ4 26392564
    200242 3wuv:J (2.79) BS01 peptide ? GO:0000281 ... Q53EZ4 26392564
    200243 3wuv:K (2.79) BS01 peptide ? GO:0000281 ... Q53EZ4 26392564
    200244 3wuv:K (2.79) BS02 peptide ? GO:0000281 ... Q53EZ4 26392564
    200245 3wuv:M (2.79) BS01 peptide ? GO:0000281 ... Q53EZ4 26392564
    200246 3wuv:N (2.79) BS01 peptide ? GO:0000281 ... Q53EZ4 26392564
    200247 3wuv:P (2.79) BS01 peptide ? GO:0000281 ... Q53EZ4 26392564
    200248 3wuv:Q (2.79) BS01 peptide ? GO:0000281 ... Q53EZ4 26392564
    200249 3wuv:Q (2.79) BS02 peptide ? GO:0000281 ... Q53EZ4 26392564
    200250 3wuw:A (2.0) BS01 peptide ? N/A P01889 24563253
    200251 3wv0:A (2.3) BS01 peptide ? N/A Q9UKJ1 24889612
    200252 3wv0:A (2.3) BS02 SIA ? N/A Q9UKJ1 24889612
    200253 3wv0:B (2.3) BS01 peptide ? N/A Q9UKJ1 24889612
    200254 3wv0:B (2.3) BS02 SIA ? N/A Q9UKJ1 24889612
    200255 3wv1:A (1.98) BS01 ZN 3.4.24.- GO:0004222 ... P45452 25264600
    200256 3wv1:A (1.98) BS02 ZN 3.4.24.- GO:0004222 ... P45452 25264600
    200257 3wv1:A (1.98) BS03 CA 3.4.24.- GO:0004222 ... P45452 25264600
    200258 3wv1:A (1.98) BS04 CA 3.4.24.- GO:0004222 ... P45452 25264600
    200259 3wv1:A (1.98) BS05 NA 3.4.24.- GO:0004222 ... P45452 25264600
    200260 3wv1:A (1.98) BS06 WHH 3.4.24.- GO:0004222 ... P45452 25264600 MOAD: ic50=0.0039nM
    BindingDB: IC50=0.003900nM
    200261 3wv1:B (1.98) BS01 ZN 3.4.24.- GO:0004222 ... P45452 25264600
    200262 3wv1:B (1.98) BS02 ZN 3.4.24.- GO:0004222 ... P45452 25264600
    200263 3wv1:B (1.98) BS03 CA 3.4.24.- GO:0004222 ... P45452 25264600
    200264 3wv1:B (1.98) BS04 CA 3.4.24.- GO:0004222 ... P45452 25264600
    200265 3wv1:B (1.98) BS05 NA 3.4.24.- GO:0004222 ... P45452 25264600
    200266 3wv1:B (1.98) BS06 WHH 3.4.24.- GO:0004222 ... P45452 25264600 MOAD: ic50=0.0039nM
    BindingDB: IC50=0.003900nM
    200267 3wv2:A (2.3) BS01 ZN 3.4.24.- GO:0004222 ... P45452 25192810
    200268 3wv2:A (2.3) BS02 ZN 3.4.24.- GO:0004222 ... P45452 25192810
    200269 3wv2:A (2.3) BS03 CA 3.4.24.- GO:0004222 ... P45452 25192810
    200270 3wv2:A (2.3) BS04 CA 3.4.24.- GO:0004222 ... P45452 25192810
    200271 3wv2:A (2.3) BS05 WGG 3.4.24.- GO:0004222 ... P45452 25192810 MOAD: ic50=12nM
    BindingDB: IC50=5.6nM
    200272 3wv2:B (2.3) BS01 ZN 3.4.24.- GO:0004222 ... P45452 25192810
    200273 3wv2:B (2.3) BS02 ZN 3.4.24.- GO:0004222 ... P45452 25192810
    200274 3wv2:B (2.3) BS03 CA 3.4.24.- GO:0004222 ... P45452 25192810
    200275 3wv2:B (2.3) BS04 CA 3.4.24.- GO:0004222 ... P45452 25192810
    200276 3wv2:B (2.3) BS05 WGG 3.4.24.- GO:0004222 ... P45452 25192810 MOAD: ic50=12nM
    BindingDB: IC50=5.6nM
    200277 3wv3:A (1.6) BS01 ZN 3.4.24.- GO:0004222 ... P45452 25192810
    200278 3wv3:A (1.6) BS02 ZN 3.4.24.- GO:0004222 ... P45452 25192810
    200279 3wv3:A (1.6) BS03 CA 3.4.24.- GO:0004222 ... P45452 25192810
    200280 3wv3:A (1.6) BS04 CA 3.4.24.- GO:0004222 ... P45452 25192810
    200281 3wv3:A (1.6) BS05 WLL 3.4.24.- GO:0004222 ... P45452 25192810 MOAD: ic50=24nM
    200282 3wv3:B (1.6) BS01 ZN 3.4.24.- GO:0004222 ... P45452 25192810
    200283 3wv3:B (1.6) BS02 ZN 3.4.24.- GO:0004222 ... P45452 25192810
    200284 3wv3:B (1.6) BS03 CA 3.4.24.- GO:0004222 ... P45452 25192810
    200285 3wv3:B (1.6) BS04 CA 3.4.24.- GO:0004222 ... P45452 25192810
    200286 3wv3:B (1.6) BS05 WLL 3.4.24.- GO:0004222 ... P45452 25192810 MOAD: ic50=24nM
    200287 3wv5:A (2.2) BS01 2AS 6.2.1.- N/A Q76KY2 25246523
    200288 3wv5:B (2.2) BS01 2AS 6.2.1.- N/A Q76KY2 25246523
    200289 3wv6:A (1.95) BS01 BGC ? GO:0030246 ... O00182 28687490
    200290 3wv6:A (1.95) BS02 GAL ? GO:0030246 ... O00182 28687490
    200291 3wv6:A (1.95) BS03 GLC ? GO:0030246 ... O00182 28687490
    200292 3wv6:A (1.95) BS04 GAL ? GO:0030246 ... O00182 28687490
    200293 3wv6:A (1.95) BS05 ZN ? GO:0030246 ... O00182 28687490
    200294 3wv6:B (1.95) BS01 BGC ? GO:0030246 ... O00182 28687490
    200295 3wv6:B (1.95) BS02 GAL ? GO:0030246 ... O00182 28687490
    200296 3wv6:B (1.95) BS03 GLC ? GO:0030246 ... O00182 28687490
    200297 3wv6:B (1.95) BS04 GAL ? GO:0030246 ... O00182 28687490
    200298 3wv6:B (1.95) BS05 ZN ? GO:0030246 ... O00182 28687490
    200299 3wv7:A (1.6) BS01 ADP 2.7.7.- GO:0005524 ... D9PY12 25882909
    200300 3wv8:A (1.8) BS01 ATP 2.7.7.- GO:0005524 ... D9PY12 25882909
    200301 3wv8:B (1.8) BS01 ATP 2.7.7.- GO:0005524 ... D9PY12 25882909
    200302 3wv9:A (2.75) BS01 ATP 2.7.7.- GO:0005524 ... D9PY12 25882909
    200303 3wv9:A (2.75) BS02 FEG 2.7.7.- GO:0005524 ... D9PY12 25882909
    200304 3wv9:B (2.75) BS01 ATP 2.7.7.- GO:0005524 ... D9PY12 25882909
    200305 3wv9:B (2.75) BS02 FEG 2.7.7.- GO:0005524 ... D9PY12 25882909
    200306 3wv9:C (2.75) BS01 ATP 2.7.7.- GO:0005524 ... D9PY12 25882909
    200307 3wv9:C (2.75) BS02 FEG 2.7.7.- GO:0005524 ... D9PY12 25882909
    200308 3wv9:D (2.75) BS01 ATP 2.7.7.- GO:0005524 ... D9PY12 25882909
    200309 3wvc:A (2.0) BS01 ZGP 3.1.2.- GO:0016746 ... Q58649 25882909
    200310 3wvc:A (2.0) BS02 FEG 3.1.2.- GO:0016746 ... Q58649 25882909
    200311 3wvc:B (2.0) BS01 ZGP 3.1.2.- GO:0016746 ... Q58649 25882909
    200312 3wvc:B (2.0) BS02 FEG 3.1.2.- GO:0016746 ... Q58649 25882909
    200313 3wvd:A (1.18) BS01 FE 4.2.1.84 GO:0003824 ... P13448 26333053
    200314 3wvd:A (1.18) BS02 TAN 4.2.1.84 GO:0003824 ... P13448 26333053
    200315 3wve:A (1.57) BS01 FE 4.2.1.84 GO:0003824 ... P13448 26333053
    200316 3wve:A (1.57) BS02 NO 4.2.1.84 GO:0003824 ... P13448 26333053
    200317 3wvg:A (2.25) BS01 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200318 3wvg:A (2.25) BS02 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200319 3wvg:B (2.25) BS01 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200320 3wvg:B (2.25) BS02 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200321 3wvg:C (2.25) BS01 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200322 3wvg:C (2.25) BS02 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200323 3wvg:D (2.25) BS01 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200324 3wvg:D (2.25) BS02 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200325 3wvh:A (2.54) BS01 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200326 3wvh:A (2.54) BS02 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200327 3wvh:A (2.54) BS03 MN 3.1.21.4 GO:0009036 ... P43870 25664735
    200328 3wvh:B (2.54) BS01 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200329 3wvh:B (2.54) BS02 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200330 3wvh:B (2.54) BS03 MN 3.1.21.4 GO:0009036 ... P43870 25664735
    200331 3wvh:C (2.54) BS01 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200332 3wvh:C (2.54) BS02 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200333 3wvh:C (2.54) BS03 MN 3.1.21.4 GO:0009036 ... P43870 25664735
    200334 3wvh:D (2.54) BS01 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200335 3wvh:D (2.54) BS02 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200336 3wvh:D (2.54) BS03 MN 3.1.21.4 GO:0009036 ... P43870 25664735
    200337 3wvi:A (2.55) BS01 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200338 3wvi:A (2.55) BS02 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200339 3wvi:A (2.55) BS03 MN 3.1.21.4 GO:0009036 ... P43870 25664735
    200340 3wvi:B (2.55) BS01 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200341 3wvi:B (2.55) BS02 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200342 3wvi:B (2.55) BS03 MN 3.1.21.4 GO:0009036 ... P43870 25664735
    200343 3wvi:C (2.55) BS01 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200344 3wvi:C (2.55) BS02 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200345 3wvi:C (2.55) BS03 MN 3.1.21.4 GO:0009036 ... P43870 25664735
    200346 3wvi:D (2.55) BS01 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200347 3wvi:D (2.55) BS02 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200348 3wvi:D (2.55) BS03 MN 3.1.21.4 GO:0009036 ... P43870 25664735
    200349 3wvk:A (2.0) BS01 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200350 3wvk:A (2.0) BS02 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200351 3wvk:A (2.0) BS03 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200352 3wvk:A (2.0) BS04 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200353 3wvk:A (2.0) BS05 MN 3.1.21.4 GO:0009036 ... P43870 25664735
    200354 3wvk:A (2.0) BS06 MN 3.1.21.4 GO:0009036 ... P43870 25664735
    200355 3wvk:B (2.0) BS01 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200356 3wvk:B (2.0) BS02 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200357 3wvk:B (2.0) BS03 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200358 3wvk:B (2.0) BS04 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200359 3wvk:B (2.0) BS05 MN 3.1.21.4 GO:0009036 ... P43870 25664735
    200360 3wvk:B (2.0) BS06 MN 3.1.21.4 GO:0009036 ... P43870 25664735
    200361 3wvk:C (2.0) BS01 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200362 3wvk:C (2.0) BS02 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200363 3wvk:C (2.0) BS03 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200364 3wvk:C (2.0) BS04 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200365 3wvk:C (2.0) BS05 MN 3.1.21.4 GO:0009036 ... P43870 25664735
    200366 3wvk:C (2.0) BS06 MN 3.1.21.4 GO:0009036 ... P43870 25664735
    200367 3wvk:D (2.0) BS01 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200368 3wvk:D (2.0) BS02 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200369 3wvk:D (2.0) BS03 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200370 3wvk:D (2.0) BS04 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200371 3wvk:D (2.0) BS05 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200372 3wvk:D (2.0) BS06 MN 3.1.21.4 GO:0009036 ... P43870 25664735
    200373 3wvk:D (2.0) BS07 MN 3.1.21.4 GO:0009036 ... P43870 25664735
    200374 3wvl:A (3.788) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 25174333
    200375 3wvl:B (3.788) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 25174333
    200376 3wvl:C (3.788) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 25174333
    200377 3wvl:D (3.788) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 25174333
    200378 3wvl:E (3.788) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 25174333
    200379 3wvl:F (3.788) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 25174333
    200380 3wvl:G (3.788) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 25174333
    200381 3wvl:H (3.788) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 25174333
    200382 3wvl:I (3.788) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 25174333
    200383 3wvl:J (3.788) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 25174333
    200384 3wvl:K (3.788) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 25174333
    200385 3wvl:L (3.788) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 25174333
    200386 3wvl:M (3.788) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 25174333
    200387 3wvl:N (3.788) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 25174333
    200388 3wvn:A (2.2) BS01 ASP 6.2.1.- GO:0016878 ... Q76KY2 25246523
    200389 3wvn:B (2.2) BS01 ASP 6.2.1.- GO:0016878 ... Q76KY2 25246523
    200390 3wvp:A (2.3) BS01 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200391 3wvp:A (2.3) BS02 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200392 3wvp:A (2.3) BS03 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200393 3wvp:A (2.3) BS04 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200394 3wvp:A (2.3) BS05 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200395 3wvp:A (2.3) BS06 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200396 3wvp:A (2.3) BS07 MN 3.1.21.4 GO:0009036 ... P43870 25664735
    200397 3wvp:B (2.3) BS01 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200398 3wvp:B (2.3) BS02 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200399 3wvp:B (2.3) BS03 dna 3.1.21.4 GO:0009036 ... P43870 25664735
    200400 3wvp:B (2.3) BS04 dna 3.1.21.4 GO:0009036 ... P43870 25664735

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).