SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    204401 4a75:E (1.75) BS01 dna ? GO:0003676 ... B4F6I0 22570413
    204402 4a75:G (1.75) BS01 dna ? GO:0003676 ... B4F6I0 22570413
    204403 4a76:A (1.92) BS01 dna ? GO:0003676 ... B4F6I0 22570413
    204404 4a76:C (1.92) BS01 dna ? GO:0003676 ... B4F6I0 22570413
    204405 4a76:E (1.92) BS01 dna ? GO:0003676 ... B4F6I0 22570413
    204406 4a76:E (1.92) BS02 dna ? GO:0003676 ... B4F6I0 22570413
    204407 4a76:G (1.92) BS01 dna ? GO:0003676 ... B4F6I0 22570413
    204408 4a76:G (1.92) BS02 dna ? GO:0003676 ... B4F6I0 22570413
    204409 4a78:A (2.01) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 22093282
    204410 4a78:A (2.01) BS02 JZ3 1.11.1.5 GO:0004601 ... P00431 22093282
    204411 4a79:A (1.89) BS01 FAD 1.4.3.21
    1.4.3.4
    GO:0005515 ... P27338 22282722
    204412 4a79:A (1.89) BS02 P1B 1.4.3.21
    1.4.3.4
    GO:0005515 ... P27338 22282722 MOAD: Ki=0.5uM
    204413 4a79:B (1.89) BS01 FAD 1.4.3.21
    1.4.3.4
    GO:0005515 ... P27338 22282722
    204414 4a79:B (1.89) BS02 P1B 1.4.3.21
    1.4.3.4
    GO:0005515 ... P27338 22282722 MOAD: Ki=0.5uM
    204415 4a7a:A (1.7) BS01 FAD 1.4.3.21
    1.4.3.4
    GO:0005515 ... P27338 22282722
    204416 4a7a:A (1.7) BS02 RGZ 1.4.3.21
    1.4.3.4
    GO:0005515 ... P27338 22282722 MOAD: Ki=4.2uM
    204417 4a7a:B (1.7) BS01 FAD 1.4.3.21
    1.4.3.4
    GO:0005515 ... P27338 22282722
    204418 4a7a:B (1.7) BS02 RGZ 1.4.3.21
    1.4.3.4
    GO:0005515 ... P27338 22282722 MOAD: Ki=4.2uM
    204419 4a7b:A (2.2) BS01 3W5 3.4.24.- GO:0004222 ... P45452 22153941
    204420 4a7b:A (2.2) BS02 ZN 3.4.24.- GO:0004222 ... P45452 22153941
    204421 4a7b:A (2.2) BS03 CA 3.4.24.- GO:0004222 ... P45452 22153941
    204422 4a7b:A (2.2) BS04 ZN 3.4.24.- GO:0004222 ... P45452 22153941
    204423 4a7b:A (2.2) BS05 CA 3.4.24.- GO:0004222 ... P45452 22153941
    204424 4a7b:B (2.2) BS01 3W4 3.4.24.- GO:0004222 ... P45452 22153941
    204425 4a7b:B (2.2) BS02 ZN 3.4.24.- GO:0004222 ... P45452 22153941
    204426 4a7b:B (2.2) BS03 ZN 3.4.24.- GO:0004222 ... P45452 22153941
    204427 4a7b:B (2.2) BS04 CA 3.4.24.- GO:0004222 ... P45452 22153941
    204428 4a7b:B (2.2) BS05 CA 3.4.24.- GO:0004222 ... P45452 22153941
    204429 4a7c:A (2.3) BS01 E46 2.7.11.1 GO:0004672 ... P11309 22266039 MOAD: ic50=0.006uM
    BindingDB: IC50=6nM, EC50=45nM
    204430 4a7f:A (7.7) BS01 ADP 3.6.4.- GO:0000287 ... P68135 22817895
    204431 4a7f:D (7.7) BS01 ADP 3.6.4.- GO:0000287 ... P68135 22817895
    204432 4a7f:E (7.7) BS01 ADP 3.6.4.- GO:0000287 ... P68135 22817895
    204433 4a7f:F (7.7) BS01 ADP 3.6.4.- GO:0000287 ... P68135 22817895
    204434 4a7f:I (7.7) BS01 ADP 3.6.4.- GO:0000287 ... P68135 22817895
    204435 4a7g:A (1.24) BS01 12I 1.15.1.1 GO:0000303 ... P00441 23278398
    204436 4a7g:A (1.24) BS02 12I 1.15.1.1 GO:0000303 ... P00441 23278398
    204437 4a7g:A (1.24) BS03 CU 1.15.1.1 GO:0000303 ... P00441 23278398
    204438 4a7g:A (1.24) BS04 ZN 1.15.1.1 GO:0000303 ... P00441 23278398
    204439 4a7g:F (1.24) BS01 CU 1.15.1.1 GO:0000303 ... P00441 23278398
    204440 4a7g:F (1.24) BS02 ZN 1.15.1.1 GO:0000303 ... P00441 23278398
    204441 4a7h:A (7.8) BS01 ADP 3.6.4.- GO:0000287 ... P68135 22817895
    204442 4a7h:A (7.8) BS02 CA 3.6.4.- GO:0000287 ... P68135 22817895
    204443 4a7h:D (7.8) BS01 ADP 3.6.4.- GO:0000287 ... P68135 22817895
    204444 4a7h:D (7.8) BS02 CA 3.6.4.- GO:0000287 ... P68135 22817895
    204445 4a7h:E (7.8) BS01 ADP 3.6.4.- GO:0000287 ... P68135 22817895
    204446 4a7h:E (7.8) BS02 CA 3.6.4.- GO:0000287 ... P68135 22817895
    204447 4a7h:F (7.8) BS01 ADP 3.6.4.- GO:0000287 ... P68135 22817895
    204448 4a7h:F (7.8) BS02 CA 3.6.4.- GO:0000287 ... P68135 22817895
    204449 4a7h:G (7.8) BS01 ADP 3.6.4.- GO:0000287 ... P68135 22817895
    204450 4a7h:G (7.8) BS02 CA 3.6.4.- GO:0000287 ... P68135 22817895
    204451 4a7i:B (2.4) BS01 CA 3.4.21.6 GO:0004252 ... P00742 22190348
    204452 4a7i:B (2.4) BS02 A7I 3.4.21.6 GO:0004252 ... P00742 22190348 MOAD: Ki=0.002uM
    204453 4a7j:A (1.9) BS01 peptide ? GO:0000122 ... P61964 22231400
    204454 4a7k:A (2.0) BS01 ZN 4.2.1.110 GO:0016836 ... P84193 22330145
    204455 4a7k:A (2.0) BS02 ZN 4.2.1.110 GO:0016836 ... P84193 22330145
    204456 4a7k:A (2.0) BS03 ZN 4.2.1.110 GO:0016836 ... P84193 22330145
    204457 4a7k:A (2.0) BS04 MG 4.2.1.110 GO:0016836 ... P84193 22330145
    204458 4a7l:A (8.1) BS01 ADP 3.6.4.- GO:0000287 ... P68135 22817895
    204459 4a7l:A (8.1) BS02 CA 3.6.4.- GO:0000287 ... P68135 22817895
    204460 4a7l:D (8.1) BS01 ADP 3.6.4.- GO:0000287 ... P68135 22817895
    204461 4a7l:D (8.1) BS02 CA 3.6.4.- GO:0000287 ... P68135 22817895
    204462 4a7l:E (8.1) BS01 ADP 3.6.4.- GO:0000287 ... P68135 22817895
    204463 4a7l:E (8.1) BS02 CA 3.6.4.- GO:0000287 ... P68135 22817895
    204464 4a7l:F (8.1) BS01 ADP 3.6.4.- GO:0000287 ... P68135 22817895
    204465 4a7l:F (8.1) BS02 CA 3.6.4.- GO:0000287 ... P68135 22817895
    204466 4a7l:I (8.1) BS01 ADP 3.6.4.- GO:0000287 ... P68135 22817895
    204467 4a7l:I (8.1) BS02 CA 3.6.4.- GO:0000287 ... P68135 22817895
    204468 4a7m:A (1.71) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 22093282
    204469 4a7n:A (8.9) BS01 ADP 3.6.4.- GO:0000287 ... P68135 22817895
    204470 4a7n:A (8.9) BS02 CA 3.6.4.- GO:0000287 ... P68135 22817895
    204471 4a7n:B (8.9) BS01 ADP 3.6.4.- GO:0000287 ... P68135 22817895
    204472 4a7n:B (8.9) BS02 CA 3.6.4.- GO:0000287 ... P68135 22817895
    204473 4a7n:C (8.9) BS01 ADP 3.6.4.- GO:0000287 ... P68135 22817895
    204474 4a7n:C (8.9) BS02 CA 3.6.4.- GO:0000287 ... P68135 22817895
    204475 4a7n:D (8.9) BS01 ADP 3.6.4.- GO:0000287 ... P68135 22817895
    204476 4a7n:D (8.9) BS02 CA 3.6.4.- GO:0000287 ... P68135 22817895
    204477 4a7n:E (8.9) BS01 ADP 3.6.4.- GO:0000287 ... P68135 22817895
    204478 4a7n:E (8.9) BS02 CA 3.6.4.- GO:0000287 ... P68135 22817895
    204479 4a7p:A (3.403) BS01 NAD 1.1.1.22 GO:0000271 ... A4UTT2 N/A
    204480 4a7p:B (3.403) BS01 NAD 1.1.1.22 GO:0000271 ... A4UTT2 N/A
    204481 4a7q:A (1.22) BS01 4MQ 1.15.1.1 GO:0000303 ... P00441 23278398
    204482 4a7q:A (1.22) BS02 CU 1.15.1.1 GO:0000303 ... P00441 23278398
    204483 4a7q:A (1.22) BS03 ZN 1.15.1.1 GO:0000303 ... P00441 23278398
    204484 4a7q:F (1.22) BS01 4MQ 1.15.1.1 GO:0000303 ... P00441 23278398
    204485 4a7q:F (1.22) BS02 CU 1.15.1.1 GO:0000303 ... P00441 23278398
    204486 4a7q:F (1.22) BS03 ZN 1.15.1.1 GO:0000303 ... P00441 23278398
    204487 4a7s:A (1.06) BS01 CU 1.15.1.1 GO:0000303 ... P00441 23612299
    204488 4a7s:A (1.06) BS02 ZN 1.15.1.1 GO:0000303 ... P00441 23612299
    204489 4a7s:A (1.06) BS03 5UD 1.15.1.1 GO:0000303 ... P00441 23612299
    204490 4a7s:F (1.06) BS01 CU 1.15.1.1 GO:0000303 ... P00441 23612299
    204491 4a7s:F (1.06) BS02 ZN 1.15.1.1 GO:0000303 ... P00441 23612299
    204492 4a7s:F (1.06) BS03 5UD 1.15.1.1 GO:0000303 ... P00441 23612299
    204493 4a7t:A (1.45) BS01 5FW 1.15.1.1 GO:0000303 ... P00441 23612299
    204494 4a7t:A (1.45) BS02 5FW 1.15.1.1 GO:0000303 ... P00441 23612299
    204495 4a7t:A (1.45) BS03 CU 1.15.1.1 GO:0000303 ... P00441 23612299
    204496 4a7t:A (1.45) BS04 ZN 1.15.1.1 GO:0000303 ... P00441 23612299
    204497 4a7t:F (1.45) BS01 5FW 1.15.1.1 GO:0000303 ... P00441 23612299
    204498 4a7t:F (1.45) BS02 5FW 1.15.1.1 GO:0000303 ... P00441 23612299
    204499 4a7t:F (1.45) BS03 CU 1.15.1.1 GO:0000303 ... P00441 23612299
    204500 4a7t:F (1.45) BS04 ZN 1.15.1.1 GO:0000303 ... P00441 23612299
    204501 4a7u:A (0.98) BS01 ALE 1.15.1.1 GO:0000303 ... P00441 23612299
    204502 4a7u:A (0.98) BS02 ALE 1.15.1.1 GO:0000303 ... P00441 23612299
    204503 4a7u:A (0.98) BS03 CU 1.15.1.1 GO:0000303 ... P00441 23612299
    204504 4a7u:A (0.98) BS04 ZN 1.15.1.1 GO:0000303 ... P00441 23612299
    204505 4a7u:F (0.98) BS01 CU 1.15.1.1 GO:0000303 ... P00441 23612299
    204506 4a7u:F (0.98) BS02 ZN 1.15.1.1 GO:0000303 ... P00441 23612299
    204507 4a7v:A (1.0) BS01 LDP 1.15.1.1 GO:0000303 ... P00441 23612299
    204508 4a7v:A (1.0) BS02 CU 1.15.1.1 GO:0000303 ... P00441 23612299
    204509 4a7v:A (1.0) BS03 ZN 1.15.1.1 GO:0000303 ... P00441 23612299
    204510 4a7v:F (1.0) BS01 CU 1.15.1.1 GO:0000303 ... P00441 23612299
    204511 4a7v:F (1.0) BS02 ZN 1.15.1.1 GO:0000303 ... P00441 23612299
    204512 4a7w:A (1.8) BS01 GTP 2.7.4.22 GO:0005737 ... P56106 22751662
    204513 4a7w:B (1.8) BS01 GTP 2.7.4.22 GO:0005737 ... P56106 22751662
    204514 4a7x:B (2.49) BS01 UDP 2.7.4.22 GO:0005737 ... P56106 22751662
    204515 4a7x:C (2.49) BS01 UDP 2.7.4.22 GO:0005737 ... P56106 22751662
    204516 4a7x:D (2.49) BS01 UDP 2.7.4.22 GO:0005737 ... P56106 22751662
    204517 4a7x:E (2.49) BS01 UDP 2.7.4.22 GO:0005737 ... P56106 22751662
    204518 4a7y:A (2.8) BS01 ZN 4.2.1.110 GO:0016836 ... P84193 22330145
    204519 4a7y:A (2.8) BS02 MG 4.2.1.110 GO:0016836 ... P84193 22330145
    204520 4a7y:A (2.8) BS03 NHF 4.2.1.110 GO:0016836 ... P84193 22330145
    204521 4a7y:A (2.8) BS04 NHF 4.2.1.110 GO:0016836 ... P84193 22330145
    204522 4a7z:A (2.6) BS01 ZN 4.2.1.110 GO:0016836 ... P84193 22330145
    204523 4a7z:A (2.6) BS02 ZN 4.2.1.110 GO:0016836 ... P84193 22330145
    204524 4a7z:A (2.6) BS03 ZN 4.2.1.110 GO:0016836 ... P84193 22330145
    204525 4a7z:A (2.6) BS04 MG 4.2.1.110 GO:0016836 ... P84193 22330145
    204526 4a7z:A (2.6) BS05 AY9 4.2.1.110 GO:0016836 ... P84193 22330145
    204527 4a7z:A (2.6) BS06 AY9 4.2.1.110 GO:0016836 ... P84193 22330145
    204528 4a80:A (1.96) BS01 2AN ? GO:0004864 ... P15494 22634284
    204529 4a81:A (2.05) BS01 DXC ? GO:0004864 ... P15494 22634284
    204530 4a81:A (2.05) BS02 2AN ? GO:0004864 ... P15494 22634284
    204531 4a83:A (1.54) BS01 DXC ? GO:0004864 ... P15494 22634284
    204532 4a83:A (1.54) BS02 DXC ? GO:0004864 ... P15494 22634284
    204533 4a84:A (1.5) BS01 DXC ? GO:0004864 ... P15494 22634284
    204534 4a84:A (1.5) BS02 DXC ? GO:0004864 ... P15494 22634284
    204535 4a85:A (1.4) BS01 H35 ? GO:0004864 ... P15494 22634284
    204536 4a86:A (1.59) BS01 2AN ? GO:0004864 ... P15494 22634284
    204537 4a86:A (1.59) BS02 H35 ? GO:0004864 ... P15494 22634284
    204538 4a87:A (1.24) BS01 NAR ? GO:0004864 ... P15494 22634284
    204539 4a8f:A (3.3) BS01 ATP 2.7.7.48 GO:0000166 ... P11124 22205747
    204540 4a8f:A (3.3) BS02 ATP 2.7.7.48 GO:0000166 ... P11124 22205747
    204541 4a8f:B (3.3) BS01 dna 2.7.7.48 GO:0000166 ... P11124 22205747
    204542 4a8f:B (3.3) BS02 ATP 2.7.7.48 GO:0000166 ... P11124 22205747
    204543 4a8f:B (3.3) BS03 ATP 2.7.7.48 GO:0000166 ... P11124 22205747
    204544 4a8f:C (3.3) BS01 ATP 2.7.7.48 GO:0000166 ... P11124 22205747
    204545 4a8f:C (3.3) BS02 ATP 2.7.7.48 GO:0000166 ... P11124 22205747
    204546 4a8f:C (3.3) BS03 MG 2.7.7.48 GO:0000166 ... P11124 22205747
    204547 4a8g:A (2.1) BS01 DMX ? GO:0004864 ... P15494 22634284
    204548 4a8h:A (2.5) BS01 PUW 2.1.3.6 GO:0004585 ... Q837U7 22363663
    204549 4a8h:B (2.5) BS01 PUW 2.1.3.6 GO:0004585 ... Q837U7 22363663
    204550 4a8i:A (0.95) BS01 CO 5.3.1.5 GO:0000287 ... P24300 N/A
    204551 4a8i:A (0.95) BS02 CO 5.3.1.5 GO:0000287 ... P24300 N/A
    204552 4a8k:A (3.5) BS01 MG 2.7.7.48 GO:0000166 ... P11124 22205747
    204553 4a8k:A (3.5) BS02 GTP 2.7.7.48 GO:0000166 ... P11124 22205747
    204554 4a8k:B (3.5) BS01 dna 2.7.7.48 GO:0000166 ... P11124 22205747
    204555 4a8k:B (3.5) BS02 MG 2.7.7.48 GO:0000166 ... P11124 22205747
    204556 4a8k:B (3.5) BS03 GTP 2.7.7.48 GO:0000166 ... P11124 22205747
    204557 4a8k:C (3.5) BS01 MG 2.7.7.48 GO:0000166 ... P11124 22205747
    204558 4a8k:C (3.5) BS02 GTP 2.7.7.48 GO:0000166 ... P11124 22205747
    204559 4a8l:A (1.35) BS01 CO 5.3.1.5 GO:0000287 ... P24300 N/A
    204560 4a8l:A (1.35) BS02 CO 5.3.1.5 GO:0000287 ... P24300 N/A
    204561 4a8m:P (2.92) BS01 MG 2.7.7.48 GO:0000166 ... P11124 22205747
    204562 4a8m:P (2.92) BS02 GTP 2.7.7.48 GO:0000166 ... P11124 22205747
    204563 4a8m:P (2.92) BS03 ATP 2.7.7.48 GO:0000166 ... P11124 22205747
    204564 4a8m:Q (2.92) BS01 dna 2.7.7.48 GO:0000166 ... P11124 22205747
    204565 4a8m:Q (2.92) BS02 MG 2.7.7.48 GO:0000166 ... P11124 22205747
    204566 4a8m:Q (2.92) BS03 GTP 2.7.7.48 GO:0000166 ... P11124 22205747
    204567 4a8m:Q (2.92) BS04 ATP 2.7.7.48 GO:0000166 ... P11124 22205747
    204568 4a8m:R (2.92) BS01 GTP 2.7.7.48 GO:0000166 ... P11124 22205747
    204569 4a8m:R (2.92) BS02 MG 2.7.7.48 GO:0000166 ... P11124 22205747
    204570 4a8n:A (1.2) BS01 CO 5.3.1.5 GO:0000287 ... P24300 N/A
    204571 4a8n:A (1.2) BS02 CO 5.3.1.5 GO:0000287 ... P24300 N/A
    204572 4a8o:A (2.67) BS01 MN 2.7.7.48 GO:0000166 ... P11124 22205747
    204573 4a8o:B (2.67) BS01 MN 2.7.7.48 GO:0000166 ... P11124 22205747
    204574 4a8o:C (2.67) BS01 MN 2.7.7.48 GO:0000166 ... P11124 22205747
    204575 4a8p:A (2.0) BS01 PAO 2.1.3.6 GO:0004585 ... Q837U7 22363663
    204576 4a8p:B (2.0) BS01 PAO 2.1.3.6 GO:0004585 ... Q837U7 22363663
    204577 4a8p:C (2.0) BS01 PAO 2.1.3.6 GO:0004585 ... Q837U7 22363663
    204578 4a8p:D (2.0) BS01 PAO 2.1.3.6 GO:0004585 ... Q837U7 22363663
    204579 4a8p:E (2.0) BS01 PAO 2.1.3.6 GO:0004585 ... Q837U7 22363663
    204580 4a8p:F (2.0) BS01 PAO 2.1.3.6 GO:0004585 ... Q837U7 22363663
    204581 4a8q:A (3.06) BS01 dna 2.7.7.48 GO:0000166 ... P11124 22205747
    204582 4a8q:A (3.06) BS02 MG 2.7.7.48 GO:0000166 ... P11124 22205747
    204583 4a8q:B (3.06) BS01 dna 2.7.7.48 GO:0000166 ... P11124 22205747
    204584 4a8q:B (3.06) BS02 MG 2.7.7.48 GO:0000166 ... P11124 22205747
    204585 4a8q:B (3.06) BS03 ATP 2.7.7.48 GO:0000166 ... P11124 22205747
    204586 4a8q:C (3.06) BS01 dna 2.7.7.48 GO:0000166 ... P11124 22205747
    204587 4a8q:C (3.06) BS02 ATP 2.7.7.48 GO:0000166 ... P11124 22205747
    204588 4a8r:A (1.42) BS01 CO 5.3.1.5 GO:0000287 ... P24300 N/A
    204589 4a8r:A (1.42) BS02 CO 5.3.1.5 GO:0000287 ... P24300 N/A
    204590 4a8s:A (2.9) BS01 dna 2.7.7.48 GO:0000166 ... P11124 22205747
    204591 4a8s:A (2.9) BS02 MG 2.7.7.48 GO:0000166 ... P11124 22205747
    204592 4a8s:A (2.9) BS03 ATP 2.7.7.48 GO:0000166 ... P11124 22205747
    204593 4a8s:B (2.9) BS01 dna 2.7.7.48 GO:0000166 ... P11124 22205747
    204594 4a8s:B (2.9) BS02 MG 2.7.7.48 GO:0000166 ... P11124 22205747
    204595 4a8s:B (2.9) BS03 ATP 2.7.7.48 GO:0000166 ... P11124 22205747
    204596 4a8s:C (2.9) BS01 dna 2.7.7.48 GO:0000166 ... P11124 22205747
    204597 4a8t:A (1.59) BS01 PAO 2.1.3.6 GO:0004585 ... Q837U7 22363663
    204598 4a8v:A (1.23) BS01 2AN ? GO:0004864 ... P43183 22634284
    204599 4a8w:A (3.04) BS01 dna 2.7.7.48 GO:0000166 ... P11124 22205747
    204600 4a8w:A (3.04) BS02 MG 2.7.7.48 GO:0000166 ... P11124 22205747

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).