SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    204601 4a8w:B (3.04) BS01 dna 2.7.7.48 GO:0000166 ... P11124 22205747
    204602 4a8w:B (3.04) BS02 MG 2.7.7.48 GO:0000166 ... P11124 22205747
    204603 4a8w:C (3.04) BS01 dna 2.7.7.48 GO:0000166 ... P11124 22205747
    204604 4a8x:A (1.9) BS01 peptide ? GO:0003676 ... Q15287 22388736
    204605 4a8x:C (1.9) BS01 peptide ? GO:0003714 ... O55128 22388736
    204606 4a8y:A (3.41) BS01 dna 2.7.7.48 GO:0000166 ... P11124 22205747
    204607 4a8y:A (3.41) BS02 MG 2.7.7.48 GO:0000166 ... P11124 22205747
    204608 4a8y:B (3.41) BS01 dna 2.7.7.48 GO:0000166 ... P11124 22205747
    204609 4a8y:B (3.41) BS02 MG 2.7.7.48 GO:0000166 ... P11124 22205747
    204610 4a8y:C (3.41) BS01 dna 2.7.7.48 GO:0000166 ... P11124 22205747
    204611 4a8y:C (3.41) BS02 ATP 2.7.7.48 GO:0000166 ... P11124 22205747
    204612 4a91:A (1.75) BS01 GLU 6.1.1.- GO:0000166 ... P27305 18602926 MOAD: Kd=2.1mM
    204613 4a91:A (1.75) BS02 ZN 6.1.1.- GO:0000166 ... P27305 18602926
    204614 4a92:A (2.73) BS01 ZN 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0004386 ... P26663 22160684
    204615 4a92:A (2.73) BS02 F9K 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0004386 ... P26663 22160684
    204616 4a92:B (2.73) BS01 F9K 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0004386 ... P26663 22160684
    204617 4a93:A (3.4) BS01 rna 2.7.7.6 GO:0001172 ... P04050 22405652
    204618 4a93:A (3.4) BS02 dna 2.7.7.6 GO:0001172 ... P04050 22405652
    204619 4a93:A (3.4) BS03 ZN 2.7.7.6 GO:0001172 ... P04050 22405652
    204620 4a93:A (3.4) BS04 ZN 2.7.7.6 GO:0001172 ... P04050 22405652
    204621 4a93:A (3.4) BS05 MG 2.7.7.6 GO:0001172 ... P04050 22405652
    204622 4a93:B (3.4) BS01 dna 2.7.7.6 GO:0001172 ... P08518 22405652
    204623 4a93:B (3.4) BS02 rna 2.7.7.6 GO:0001172 ... P08518 22405652
    204624 4a93:B (3.4) BS03 dna 2.7.7.6 GO:0001172 ... P08518 22405652
    204625 4a93:B (3.4) BS04 ZN 2.7.7.6 GO:0001172 ... P08518 22405652
    204626 4a93:C (3.4) BS01 ZN ? GO:0000428 ... P16370 22405652
    204627 4a93:I (3.4) BS01 ZN ? GO:0001172 ... P27999 22405652
    204628 4a93:I (3.4) BS02 ZN ? GO:0001172 ... P27999 22405652
    204629 4a93:J (3.4) BS01 ZN ? GO:0001172 ... P22139 22405652
    204630 4a93:L (3.4) BS01 ZN ? GO:0001172 ... P40422 22405652
    204631 4a94:A (1.7) BS01 ZN 3.4.17.- GO:0004181 ... Q9UI42 22294694
    204632 4a94:B (1.7) BS01 ZN 3.4.17.- GO:0004181 ... Q9UI42 22294694
    204633 4a95:A (1.55) BS01 9MT 2.3.1.97 GO:0004379 ... A5K1A2 22439843 MOAD: Ki=1.73uM
    204634 4a95:A (1.55) BS02 NHW 2.3.1.97 GO:0004379 ... A5K1A2 22439843
    204635 4a95:A (1.55) BS03 MG 2.3.1.97 GO:0004379 ... A5K1A2 22439843
    204636 4a95:B (1.55) BS01 9MT 2.3.1.97 GO:0004379 ... A5K1A2 22439843 MOAD: Ki=1.73uM
    204637 4a95:B (1.55) BS02 NHW 2.3.1.97 GO:0004379 ... A5K1A2 22439843
    204638 4a95:B (1.55) BS03 MG 2.3.1.97 GO:0004379 ... A5K1A2 22439843
    204639 4a95:C (1.55) BS01 9MT 2.3.1.97 GO:0004379 ... A5K1A2 22439843 MOAD: Ki=1.73uM
    204640 4a95:C (1.55) BS02 NHW 2.3.1.97 GO:0004379 ... A5K1A2 22439843
    204641 4a95:C (1.55) BS03 MG 2.3.1.97 GO:0004379 ... A5K1A2 22439843
    204642 4a97:A (3.343) BS01 ZPC ? GO:0004888 ... P0C7B7 23035248
    204643 4a97:A (3.343) BS02 ZPC ? GO:0004888 ... P0C7B7 23035248
    204644 4a97:B (3.343) BS01 ZPC ? GO:0004888 ... P0C7B7 23035248
    204645 4a97:B (3.343) BS02 ZPC ? GO:0004888 ... P0C7B7 23035248
    204646 4a97:C (3.343) BS01 ZPC ? GO:0004888 ... P0C7B7 23035248
    204647 4a97:C (3.343) BS02 ZPC ? GO:0004888 ... P0C7B7 23035248
    204648 4a97:D (3.343) BS01 ZPC ? GO:0004888 ... P0C7B7 23035248
    204649 4a97:D (3.343) BS02 ZPC ? GO:0004888 ... P0C7B7 23035248
    204650 4a97:E (3.343) BS01 ZPC ? GO:0004888 ... P0C7B7 23035248
    204651 4a97:E (3.343) BS02 ZPC ? GO:0004888 ... P0C7B7 23035248
    204652 4a97:F (3.343) BS01 ZPC ? GO:0004888 ... P0C7B7 23035248
    204653 4a97:F (3.343) BS02 ZPC ? GO:0004888 ... P0C7B7 23035248
    204654 4a97:G (3.343) BS01 ZPC ? GO:0004888 ... P0C7B7 23035248
    204655 4a97:G (3.343) BS02 ZPC ? GO:0004888 ... P0C7B7 23035248
    204656 4a97:H (3.343) BS01 ZPC ? GO:0004888 ... P0C7B7 23035248
    204657 4a97:H (3.343) BS02 ZPC ? GO:0004888 ... P0C7B7 23035248
    204658 4a97:I (3.343) BS01 ZPC ? GO:0004888 ... P0C7B7 23035248
    204659 4a97:I (3.343) BS02 ZPC ? GO:0004888 ... P0C7B7 23035248
    204660 4a97:J (3.343) BS01 ZPC ? GO:0004888 ... P0C7B7 23035248
    204661 4a97:J (3.343) BS02 ZPC ? GO:0004888 ... P0C7B7 23035248
    204662 4a98:A (3.61) BS01 BFZ ? GO:0004888 ... P0C7B7 23035248
    204663 4a98:A (3.61) BS02 BFZ ? GO:0004888 ... P0C7B7 23035248
    204664 4a98:B (3.61) BS01 BFZ ? GO:0004888 ... P0C7B7 23035248
    204665 4a98:B (3.61) BS02 BFZ ? GO:0004888 ... P0C7B7 23035248
    204666 4a98:C (3.61) BS01 BFZ ? GO:0004888 ... P0C7B7 23035248
    204667 4a98:C (3.61) BS02 BFZ ? GO:0004888 ... P0C7B7 23035248
    204668 4a98:D (3.61) BS01 BFZ ? GO:0004888 ... P0C7B7 23035248
    204669 4a98:D (3.61) BS02 BFZ ? GO:0004888 ... P0C7B7 23035248
    204670 4a98:E (3.61) BS01 BFZ ? GO:0004888 ... P0C7B7 23035248
    204671 4a98:E (3.61) BS02 BFZ ? GO:0004888 ... P0C7B7 23035248
    204672 4a98:F (3.61) BS01 BFZ ? GO:0004888 ... P0C7B7 23035248
    204673 4a98:F (3.61) BS02 BFZ ? GO:0004888 ... P0C7B7 23035248
    204674 4a98:G (3.61) BS01 BFZ ? GO:0004888 ... P0C7B7 23035248
    204675 4a98:G (3.61) BS02 BFZ ? GO:0004888 ... P0C7B7 23035248
    204676 4a98:H (3.61) BS01 BFZ ? GO:0004888 ... P0C7B7 23035248
    204677 4a98:H (3.61) BS02 BFZ ? GO:0004888 ... P0C7B7 23035248
    204678 4a98:I (3.61) BS01 BFZ ? GO:0004888 ... P0C7B7 23035248
    204679 4a98:I (3.61) BS02 BFZ ? GO:0004888 ... P0C7B7 23035248
    204680 4a98:J (3.61) BS01 BFZ ? GO:0004888 ... P0C7B7 23035248
    204681 4a98:J (3.61) BS02 BFZ ? GO:0004888 ... P0C7B7 23035248
    204682 4a99:A (2.18) BS01 FAD 1.14.13.231 GO:0000166 ... Q93L51 23999299
    204683 4a99:A (2.18) BS02 MIY 1.14.13.231 GO:0000166 ... Q93L51 23999299
    204684 4a99:A (2.18) BS03 MIY 1.14.13.231 GO:0000166 ... Q93L51 23999299
    204685 4a99:A (2.18) BS04 MIY 1.14.13.231 GO:0000166 ... Q93L51 23999299
    204686 4a99:B (2.18) BS01 FAD 1.14.13.231 GO:0000166 ... Q93L51 23999299
    204687 4a99:B (2.18) BS02 MIY 1.14.13.231 GO:0000166 ... Q93L51 23999299
    204688 4a99:C (2.18) BS01 MIY 1.14.13.231 GO:0000166 ... Q93L51 23999299
    204689 4a99:C (2.18) BS02 FAD 1.14.13.231 GO:0000166 ... Q93L51 23999299
    204690 4a99:C (2.18) BS03 MIY 1.14.13.231 GO:0000166 ... Q93L51 23999299
    204691 4a99:C (2.18) BS04 MIY 1.14.13.231 GO:0000166 ... Q93L51 23999299
    204692 4a99:D (2.18) BS01 FAD 1.14.13.231 GO:0000166 ... Q93L51 23999299
    204693 4a99:D (2.18) BS02 MIY 1.14.13.231 GO:0000166 ... Q93L51 23999299
    204694 4a99:D (2.18) BS03 MIY 1.14.13.231 GO:0000166 ... Q93L51 23999299
    204695 4a99:D (2.18) BS04 MIY 1.14.13.231 GO:0000166 ... Q93L51 23999299
    204696 4a9c:B (2.1) BS01 B5F 3.1.3.86 GO:0016791 ... O15357 22330088 MOAD: ic50=24.8uM
    204697 4a9e:A (1.91) BS01 3PF ? N/A P25440 22136404
    204698 4a9e:B (1.91) BS01 3PF ? N/A P25440 22136404
    204699 4a9e:C (1.91) BS01 3PF ? N/A P25440 22136404
    204700 4a9f:A (1.73) BS01 MB3 ? N/A P25440 22136404
    204701 4a9f:B (1.73) BS01 MB3 ? N/A P25440 22136404
    204702 4a9h:A (2.05) BS01 TVP ? N/A P25440 22136404
    204703 4a9h:B (2.05) BS01 TVP ? N/A P25440 22136404
    204704 4a9h:C (2.05) BS01 TVP ? N/A P25440 22136404
    204705 4a9i:A (2.25) BS01 P9I ? N/A P25440 22136404
    204706 4a9i:B (2.25) BS01 P9I ? N/A P25440 22136404
    204707 4a9i:C (2.25) BS01 P9I ? N/A P25440 22136404
    204708 4a9j:A (1.9) BS01 TYL ? N/A P25440 22136404
    204709 4a9j:B (1.9) BS01 TYL ? N/A P25440 22136404
    204710 4a9j:C (1.9) BS01 TYL ? N/A P25440 22136404
    204711 4a9k:A (1.81) BS01 TYL 2.3.1.-
    2.3.1.48
    N/A Q92793 22136404
    204712 4a9k:B (1.81) BS01 TYL 2.3.1.-
    2.3.1.48
    N/A Q92793 22136404
    204713 4a9l:A (1.6) BS01 P9L ? N/A O60885 22136404 BindingDB: IC50=30000nM
    204714 4a9m:A (2.06) BS01 P9M ? N/A P25440 22136469 MOAD: ic50=0.5uM
    BindingDB: IC50=500nM
    204715 4a9m:B (2.06) BS01 P9M ? N/A P25440 22136469 MOAD: ic50=0.5uM
    BindingDB: IC50=500nM
    204716 4a9m:C (2.06) BS01 P9M ? N/A P25440 22136469 MOAD: ic50=0.5uM
    BindingDB: IC50=500nM
    204717 4a9n:A (1.85) BS01 A9N ? N/A P25440 22136469 MOAD: ic50=1.5uM
    204718 4a9n:B (1.85) BS01 A9N ? N/A P25440 22136469 MOAD: ic50=1.5uM
    204719 4a9o:A (1.78) BS01 A9O ? N/A P25440 22136469
    204720 4a9o:B (1.78) BS01 A9O ? N/A P25440 22136469
    204721 4a9o:C (1.78) BS01 A9O ? N/A P25440 22136469
    204722 4a9r:A (2.85) BS01 RU5 2.7.11.1 GO:0004672 ... O96017 23058106 BindingDB: IC50=15nM
    204723 4a9s:A (2.66) BS01 RU9 2.7.11.1 GO:0004672 ... O96017 23058106 BindingDB: IC50=61nM
    204724 4a9t:A (2.7) BS01 A9T 2.7.11.1 GO:0004672 ... O96017 23058106
    204725 4a9u:A (2.48) BS01 A9U 2.7.11.1 GO:0004672 ... O96017 23058106 BindingDB: IC50=70nM
    204726 4a9v:A (1.1) BS01 CA 3.1.3.1 N/A Q3K5N8 25190793
    204727 4a9v:A (1.1) BS02 CA 3.1.3.1 N/A Q3K5N8 25190793
    204728 4a9v:A (1.1) BS03 FEO 3.1.3.1 N/A Q3K5N8 25190793
    204729 4a9w:A (2.72) BS01 FAD 1.14.13.8 GO:0004497 ... B2FRL2 22416037
    204730 4a9w:B (2.72) BS01 FAD 1.14.13.8 GO:0004497 ... B2FRL2 22416037
    204731 4a9x:A (1.79) BS01 ACP 3.1.3.1 N/A Q3K5N8 25190793
    204732 4a9x:A (1.79) BS02 CA 3.1.3.1 N/A Q3K5N8 25190793
    204733 4a9x:A (1.79) BS03 CA 3.1.3.1 N/A Q3K5N8 25190793
    204734 4a9x:A (1.79) BS04 CA 3.1.3.1 N/A Q3K5N8 25190793
    204735 4a9x:A (1.79) BS05 FEO 3.1.3.1 N/A Q3K5N8 25190793
    204736 4a9y:A (2.2) BS01 AQZ 2.7.11.24 GO:0000165 ... Q16539 22608965 BindingDB: IC50=39nM
    204737 4aa0:A (1.8) BS01 AA0 2.7.11.24 GO:0000165 ... Q16539 22608965 MOAD: ic50=35nM
    BindingDB: IC50=420nM
    204738 4aa1:A (1.99) BS01 peptide 3.4.15.1 GO:0006508 ... Q10714 23082758
    204739 4aa1:A (1.99) BS02 ZN 3.4.15.1 GO:0006508 ... Q10714 23082758
    204740 4aa2:A (1.99) BS01 peptide 3.4.15.1 GO:0006508 ... Q10714 23082758
    204741 4aa2:A (1.99) BS02 ZN 3.4.15.1 GO:0006508 ... Q10714 23082758
    204742 4aa4:A (2.3) BS01 QC0 2.7.11.24 GO:0000165 ... Q16539 22608965 MOAD: ic50=9nM
    BindingDB: IC50=15.85nM
    204743 4aa5:A (2.38) BS01 NQB 2.7.11.24 GO:0000165 ... Q16539 22608965 MOAD: ic50=16nM
    BindingDB: IC50=15.85nM
    204744 4aa6:A (2.6) BS01 dna ? GO:0003700 ... P03372 7735836
    204745 4aa6:A (2.6) BS02 dna ? GO:0003700 ... P03372 7735836
    204746 4aa6:A (2.6) BS03 ZN ? GO:0003700 ... P03372 7735836
    204747 4aa6:A (2.6) BS04 ZN ? GO:0003700 ... P03372 7735836
    204748 4aa6:B (2.6) BS01 dna ? GO:0003700 ... P03372 7735836
    204749 4aa6:B (2.6) BS02 dna ? GO:0003700 ... P03372 7735836
    204750 4aa6:B (2.6) BS03 ZN ? GO:0003700 ... P03372 7735836
    204751 4aa6:B (2.6) BS04 ZN ? GO:0003700 ... P03372 7735836
    204752 4aa6:E (2.6) BS01 dna ? GO:0003700 ... P03372 7735836
    204753 4aa6:E (2.6) BS02 dna ? GO:0003700 ... P03372 7735836
    204754 4aa6:E (2.6) BS03 ZN ? GO:0003700 ... P03372 7735836
    204755 4aa6:E (2.6) BS04 ZN ? GO:0003700 ... P03372 7735836
    204756 4aa6:F (2.6) BS01 dna ? GO:0003700 ... P03372 7735836
    204757 4aa6:F (2.6) BS02 dna ? GO:0003700 ... P03372 7735836
    204758 4aa6:F (2.6) BS03 ZN ? GO:0003700 ... P03372 7735836
    204759 4aa6:F (2.6) BS04 ZN ? GO:0003700 ... P03372 7735836
    204760 4aa7:A (2.0) BS01 R82 2.3.1.157
    2.7.7.23
    GO:0003977 ... P0ACC7 22297115 MOAD: ic50=2uM
    BindingDB: IC50=2000nM
    204761 4aa7:B (2.0) BS01 R82 2.3.1.157
    2.7.7.23
    GO:0003977 ... P0ACC7 22297115 MOAD: ic50=2uM
    BindingDB: IC50=2000nM
    204762 4aaa:A (1.53) BS01 DKI 2.7.11.22 GO:0004672 ... Q92772 29420175
    204763 4aab:A (2.5) BS01 dna 3.1.-.- GO:0004519 ... P05725 22495931
    204764 4aab:A (2.5) BS02 dna 3.1.-.- GO:0004519 ... P05725 22495931
    204765 4aab:A (2.5) BS03 dna 3.1.-.- GO:0004519 ... P05725 22495931
    204766 4aab:B (2.5) BS01 dna 3.1.-.- GO:0004519 ... P05725 22495931
    204767 4aab:B (2.5) BS02 dna 3.1.-.- GO:0004519 ... P05725 22495931
    204768 4aab:B (2.5) BS03 dna 3.1.-.- GO:0004519 ... P05725 22495931
    204769 4aac:A (2.5) BS01 AAV 2.7.11.24 GO:0000165 ... Q16539 22608965 MOAD: ic50=6.7nM
    BindingDB: IC50=4.68nM
    204770 4aad:A (3.1) BS01 dna 3.1.-.- GO:0004519 ... P05725 22495931
    204771 4aad:A (3.1) BS02 dna 3.1.-.- GO:0004519 ... P05725 22495931
    204772 4aad:B (3.1) BS01 dna 3.1.-.- GO:0004519 ... P05725 22495931
    204773 4aad:B (3.1) BS02 dna 3.1.-.- GO:0004519 ... P05725 22495931
    204774 4aae:A (2.6) BS01 dna 3.1.-.- GO:0004519 ... P05725 22495931
    204775 4aae:A (2.6) BS02 dna 3.1.-.- GO:0004519 ... P05725 22495931
    204776 4aae:B (2.6) BS01 dna 3.1.-.- GO:0004519 ... P05725 22495931
    204777 4aae:B (2.6) BS02 dna 3.1.-.- GO:0004519 ... P05725 22495931
    204778 4aaf:A (2.5) BS01 dna 3.1.-.- GO:0004519 ... P05725 22495931
    204779 4aaf:A (2.5) BS02 dna 3.1.-.- GO:0004519 ... P05725 22495931
    204780 4aaf:B (2.5) BS01 dna 3.1.-.- GO:0004519 ... P05725 22495931
    204781 4aaf:B (2.5) BS02 dna 3.1.-.- GO:0004519 ... P05725 22495931
    204782 4aag:A (2.8) BS01 dna 3.1.-.- GO:0004519 ... P05725 22495931
    204783 4aag:A (2.8) BS02 dna 3.1.-.- GO:0004519 ... P05725 22495931
    204784 4aag:B (2.8) BS01 dna 3.1.-.- GO:0004519 ... P05725 22495931
    204785 4aag:B (2.8) BS02 dna 3.1.-.- GO:0004519 ... P05725 22495931
    204786 4aah:A (2.4) BS01 CA 1.1.2.7 GO:0005509 ... P38539 8676383
    204787 4aah:A (2.4) BS02 PQQ 1.1.2.7 GO:0005509 ... P38539 8676383
    204788 4aah:C (2.4) BS01 CA 1.1.2.7 GO:0005509 ... P38539 8676383
    204789 4aah:C (2.4) BS02 PQQ 1.1.2.7 GO:0005509 ... P38539 8676383
    204790 4aal:A (1.84) BS01 HEC 1.11.1.5 GO:0004130 ... Q74FY6 22417533
    204791 4aal:A (1.84) BS02 HEC 1.11.1.5 GO:0004130 ... Q74FY6 22417533
    204792 4aal:A (1.84) BS03 CA 1.11.1.5 GO:0004130 ... Q74FY6 22417533
    204793 4aal:B (1.84) BS01 HEC 1.11.1.5 GO:0004130 ... Q74FY6 22417533
    204794 4aal:B (1.84) BS02 HEC 1.11.1.5 GO:0004130 ... Q74FY6 22417533
    204795 4aal:B (1.84) BS03 CA 1.11.1.5 GO:0004130 ... Q74FY6 22417533
    204796 4aam:A (2.17) BS01 HEC 1.11.1.5 GO:0004130 ... Q74FY6 22417533
    204797 4aam:A (2.17) BS02 HEC 1.11.1.5 GO:0004130 ... Q74FY6 22417533
    204798 4aam:A (2.17) BS03 CA 1.11.1.5 GO:0004130 ... Q74FY6 22417533
    204799 4aan:A (1.22) BS01 HEC 1.11.1.5 GO:0004130 ... Q74FY6 22417533
    204800 4aan:A (1.22) BS02 HEC 1.11.1.5 GO:0004130 ... Q74FY6 22417533

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).