SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    206401 4aqe:A (2.27) BS02 CA ? GO:0005509 ... Q99PF4 23135401
    206402 4aqe:A (2.27) BS03 CA ? GO:0005509 ... Q99PF4 23135401
    206403 4aqe:A (2.27) BS04 CA ? GO:0005509 ... Q99PF4 23135401
    206404 4aqe:B (2.27) BS01 CA ? GO:0005509 ... Q99PJ1 23135401
    206405 4aqe:B (2.27) BS02 CA ? GO:0005509 ... Q99PJ1 23135401
    206406 4aqe:B (2.27) BS03 CA ? GO:0005509 ... Q99PJ1 23135401
    206407 4aqh:A (2.4) BS01 TB7 ? GO:0001525 ... P05121 23155046
    206408 4aqh:B (2.4) BS01 TB7 ? GO:0001525 ... P05121 23155046
    206409 4aqh:C (2.4) BS01 TB7 ? GO:0001525 ... P05121 23155046
    206410 4aqi:A (1.7) BS01 CA ? GO:0005509 ... Q86SG5 22747601
    206411 4aqi:A (1.7) BS02 ZN ? GO:0005509 ... Q86SG5 22747601
    206412 4aqj:A (1.6) BS01 CA ? GO:0000302 ... P31151 22747601
    206413 4aqj:A (1.6) BS02 ZN ? GO:0000302 ... P31151 22747601
    206414 4aqk:A (2.4) BS01 IHP 2.7.1.158 GO:0005524 ... Q93YN9 22684075
    206415 4aqk:A (2.4) BS02 ADP 2.7.1.158 GO:0005524 ... Q93YN9 22684075
    206416 4aqk:A (2.4) BS03 ZN 2.7.1.158 GO:0005524 ... Q93YN9 22684075
    206417 4aqk:A (2.4) BS04 MG 2.7.1.158 GO:0005524 ... Q93YN9 22684075
    206418 4aql:A (1.99) BS01 ZN 3.5.4.3 GO:0005515 ... Q9Y2T3 22662200
    206419 4aql:A (1.99) BS02 TXC 3.5.4.3 GO:0005515 ... Q9Y2T3 22662200
    206420 4aqo:A (0.99) BS01 CA 3.4.24.3 N/A Q9X721 23703618
    206421 4aqr:A (1.95) BS01 CA ? GO:0005509 ... P59220 23086147
    206422 4aqr:A (1.95) BS02 CA ? GO:0005509 ... P59220 23086147
    206423 4aqr:A (1.95) BS03 CA ? GO:0005509 ... P59220 23086147
    206424 4aqr:A (1.95) BS04 CA ? GO:0005509 ... P59220 23086147
    206425 4aqr:B (1.95) BS01 CA ? GO:0005509 ... P59220 23086147
    206426 4aqr:B (1.95) BS02 CA ? GO:0005509 ... P59220 23086147
    206427 4aqr:B (1.95) BS03 CA ? GO:0005509 ... P59220 23086147
    206428 4aqr:B (1.95) BS04 CA ? GO:0005509 ... P59220 23086147
    206429 4aqt:A (3.2) BS01 CA ? N/A P02468 22860131
    206430 4aqu:A (2.3) BS01 dna 3.1.-.- GO:0004519 ... P05725 22740697
    206431 4aqu:A (2.3) BS02 dna 3.1.-.- GO:0004519 ... P05725 22740697
    206432 4aqu:B (2.3) BS01 dna 3.1.-.- GO:0004519 ... P05725 22740697
    206433 4aqu:B (2.3) BS02 dna 3.1.-.- GO:0004519 ... P05725 22740697
    206434 4aqv:A (9.7) BS01 GTP 3.6.5.- GO:0000226 ... Q2HJ86 23135273
    206435 4aqv:B (9.7) BS01 TA1 ? GO:0000226 ... Q6B856 23135273
    206436 4aqv:C (9.7) BS01 ANP ? GO:0003777 ... P52732 23135273
    206437 4aqw:A (9.5) BS01 GTP 3.6.5.- GO:0000226 ... Q2HJ86 23135273
    206438 4aqw:B (9.5) BS01 TA1 ? GO:0000226 ... Q6B856 23135273
    206439 4aqx:A (2.2) BS01 dna 3.1.-.- GO:0004519 ... P05725 22740697
    206440 4aqx:A (2.2) BS02 dna 3.1.-.- GO:0004519 ... P05725 22740697
    206441 4aqx:A (2.2) BS03 dna 3.1.-.- GO:0004519 ... P05725 22740697
    206442 4aqx:B (2.2) BS01 dna 3.1.-.- GO:0004519 ... P05725 22740697
    206443 4aqx:B (2.2) BS02 dna 3.1.-.- GO:0004519 ... P05725 22740697
    206444 4aqx:B (2.2) BS03 dna 3.1.-.- GO:0004519 ... P05725 22740697
    206445 4aqy:B (3.5) BS01 rna ? GO:0003735 ... P80371 22699498
    206446 4aqy:C (3.5) BS01 rna ? GO:0003676 ... P80372 22699498
    206447 4aqy:D (3.5) BS01 rna ? GO:0003723 ... P80373 22699498
    206448 4aqy:D (3.5) BS02 MG ? GO:0003723 ... P80373 22699498
    206449 4aqy:E (3.5) BS01 rna ? GO:0003723 ... Q5SHQ5 22699498
    206450 4aqy:F (3.5) BS01 rna ? GO:0003735 ... Q5SLP8 22699498
    206451 4aqy:F (3.5) BS02 MG ? GO:0003735 ... Q5SLP8 22699498
    206452 4aqy:G (3.5) BS01 rna ? GO:0000049 ... P17291 22699498
    206453 4aqy:G (3.5) BS02 MG ? GO:0000049 ... P17291 22699498
    206454 4aqy:H (3.5) BS01 rna ? GO:0003735 ... P0DOY9 22699498
    206455 4aqy:H (3.5) BS02 MG ? GO:0003735 ... P0DOY9 22699498
    206456 4aqy:I (3.5) BS01 rna ? GO:0003723 ... P80374 22699498
    206457 4aqy:J (3.5) BS01 rna ? GO:0000049 ... Q5SHN7 22699498
    206458 4aqy:K (3.5) BS01 rna ? GO:0003735 ... P80376 22699498
    206459 4aqy:K (3.5) BS02 MG ? GO:0003735 ... P80376 22699498
    206460 4aqy:L (3.5) BS01 rna ? GO:0000049 ... Q5SHN3 22699498
    206461 4aqy:M (3.5) BS01 rna ? GO:0000049 ... P80377 22699498
    206462 4aqy:M (3.5) BS02 MG ? GO:0000049 ... P80377 22699498
    206463 4aqy:N (3.5) BS01 rna ? GO:0003735 ... P0DOY6 22699498
    206464 4aqy:N (3.5) BS02 ZN ? GO:0003735 ... P0DOY6 22699498
    206465 4aqy:O (3.5) BS01 rna ? GO:0003735 ... Q5SJ76 22699498
    206466 4aqy:P (3.5) BS01 rna ? GO:0003735 ... Q5SJH3 22699498
    206467 4aqy:Q (3.5) BS01 rna ? GO:0003735 ... P0DOY7 22699498
    206468 4aqy:R (3.5) BS01 rna ? GO:0003735 ... Q5SLQ0 22699498
    206469 4aqy:S (3.5) BS01 rna ? GO:0000028 ... Q5SHP2 22699498
    206470 4aqy:T (3.5) BS01 rna ? GO:0003723 ... P80380 22699498
    206471 4ar1:A (2.01) BS01 ZN 3.4.24.3 GO:0004222 ... Q46085 23703618
    206472 4ar1:A (2.01) BS02 CA 3.4.24.3 GO:0004222 ... Q46085 23703618
    206473 4ar2:A (3.8) BS01 peptide ? GO:0005198 ... Q2Y0H9 23049939
    206474 4ar3:A (1.05) BS01 FE ? GO:0009055 ... P24297 23225503
    206475 4ar3:A (1.05) BS02 D8U ? GO:0009055 ... P24297 23225503
    206476 4ar3:A (1.05) BS03 D3O ? GO:0009055 ... P24297 23225503
    206477 4ar3:A (1.05) BS04 D3O ? GO:0009055 ... P24297 23225503
    206478 4ar4:A (1.381) BS01 FE ? GO:0009055 ... P24297 23225503
    206479 4ar4:A (1.381) BS02 D8U ? GO:0009055 ... P24297 23225503
    206480 4ar4:A (1.381) BS03 D3O ? GO:0009055 ... P24297 23225503
    206481 4ar4:A (1.381) BS04 D3O ? GO:0009055 ... P24297 23225503
    206482 4ar5:A (1.0) BS01 FE ? GO:0005506 ... P24297 23225503
    206483 4ar6:A (0.92) BS01 FE ? GO:0005506 ... P24297 23225503
    206484 4ar8:A (2.05) BS01 peptide 3.4.24.3 GO:0004222 ... Q899Y1 23703618
    206485 4ar8:A (2.05) BS02 ZN 3.4.24.3 GO:0004222 ... Q899Y1 23703618
    206486 4ar8:A (2.05) BS03 CA 3.4.24.3 GO:0004222 ... Q899Y1 23703618
    206487 4ar8:B (2.05) BS01 peptide 3.4.24.3 GO:0004222 ... Q899Y1 23703618
    206488 4ar8:B (2.05) BS02 ZN 3.4.24.3 GO:0004222 ... Q899Y1 23703618
    206489 4ar8:B (2.05) BS03 CA 3.4.24.3 GO:0004222 ... Q899Y1 23703618
    206490 4ar9:A (1.69) BS01 ZN 3.4.24.3 GO:0004222 ... Q899Y1 23703618
    206491 4ar9:A (1.69) BS02 CA 3.4.24.3 GO:0004222 ... Q899Y1 23703618
    206492 4ar9:B (1.69) BS01 ZN 3.4.24.3 GO:0004222 ... Q899Y1 23703618
    206493 4ar9:B (1.69) BS02 CA 3.4.24.3 GO:0004222 ... Q899Y1 23703618
    206494 4ara:A (2.5) BS01 C56 3.1.1.7 GO:0001919 ... P21836 23161758 MOAD: Kd=0.9uM
    206495 4ara:B (2.5) BS01 C56 3.1.1.7 GO:0001919 ... P21836 23161758 MOAD: Kd=0.9uM
    206496 4arb:A (2.25) BS01 C57 3.1.1.7 GO:0001919 ... P21836 23161758 MOAD: Kd=1.3uM
    206497 4arb:B (2.25) BS01 C57 3.1.1.7 GO:0001919 ... P21836 23161758 MOAD: Kd=1.3uM
    206498 4arc:A (2.0) BS01 rna 6.1.1.4 GO:0000166 ... P07813 22683997
    206499 4arc:A (2.0) BS02 LEU 6.1.1.4 GO:0000166 ... P07813 22683997
    206500 4are:A (2.19) BS01 ZN 3.4.24.3 GO:0004222 ... Q9X721 23703618
    206501 4arf:A (1.77) BS01 peptide 3.4.24.3 GO:0004222 ... Q46085 23703618
    206502 4arf:A (1.77) BS02 ZN 3.4.24.3 GO:0004222 ... Q46085 23703618
    206503 4arf:A (1.77) BS03 CA 3.4.24.3 GO:0004222 ... Q46085 23703618
    206504 4ari:A (2.08) BS01 rna 6.1.1.4 GO:0000166 ... P07813 22683997
    206505 4ari:A (2.08) BS02 MG 6.1.1.4 GO:0000166 ... P07813 22683997
    206506 4ark:A (2.6) BS01 ADP 2.7.12.2 GO:0004672 ... Q02750 23474388
    206507 4ark:A (2.6) BS02 MG 2.7.12.2 GO:0004672 ... Q02750 23474388
    206508 4ark:A (2.6) BS03 M3K 2.7.12.2 GO:0004672 ... Q02750 23474388
    206509 4arn:B (2.41) BS01 BMA ? N/A P08953
    Q4G1L2
    23245851
    206510 4aro:A (1.59) BS01 IHS 3.1.3.26 GO:0016791 ... H9TUK5 23741456
    206511 4aro:A (1.59) BS02 IHS 3.1.3.26 GO:0016791 ... H9TUK5 23741456
    206512 4arr:A (3.0) BS01 I3C ? N/A P08953
    Q4G1L2
    23596340
    206513 4arr:B (3.0) BS01 I3C ? N/A P08953
    Q4G1L2
    23596340
    206514 4arv:A (1.67) BS01 PO4 3.1.3.26 N/A H9TUK6 23741456
    206515 4arv:A (1.67) BS02 PO4 3.1.3.26 N/A H9TUK6 23741456
    206516 4arv:B (1.67) BS01 PO4 3.1.3.26 N/A H9TUK6 23741456
    206517 4arv:B (1.67) BS02 PO4 3.1.3.26 N/A H9TUK6 23741456
    206518 4arw:A (2.204) BS01 HNR 2.7.7.24 GO:0000271 ... Q9HU22 23138692 MOAD: Kd=0.074uM
    BindingDB: IC50=2.1e+2nM
    206519 4arw:B (2.204) BS01 HNR 2.7.7.24 GO:0000271 ... Q9HU22 23138692 MOAD: Kd=0.074uM
    BindingDB: IC50=2.1e+2nM
    206520 4arw:C (2.204) BS01 HNR 2.7.7.24 GO:0000271 ... Q9HU22 23138692 MOAD: Kd=0.074uM
    BindingDB: IC50=2.1e+2nM
    206521 4arw:D (2.204) BS01 HNR 2.7.7.24 GO:0000271 ... Q9HU22 23138692 MOAD: Kd=0.074uM
    BindingDB: IC50=2.1e+2nM
    206522 4arx:A (2.35) BS01 13D ? GO:0001907 ... P05068 N/A
    206523 4arx:A (2.35) BS02 13D ? GO:0001907 ... P05068 N/A
    206524 4arx:B (2.35) BS01 13D ? GO:0001907 ... P05068 N/A
    206525 4arx:B (2.35) BS02 13D ? GO:0001907 ... P05068 N/A
    206526 4arx:C (2.35) BS01 13D ? GO:0001907 ... P05068 N/A
    206527 4arx:D (2.35) BS01 13D ? GO:0001907 ... P05068 N/A
    206528 4ary:A (2.95) BS01 NGA ? GO:0001907 ... P05068 N/A
    206529 4ary:B (2.95) BS01 NGA ? GO:0001907 ... P05068 N/A
    206530 4ary:C (2.95) BS01 NGA ? GO:0001907 ... P05068 N/A
    206531 4ary:D (2.95) BS01 NGA ? GO:0001907 ... P05068 N/A
    206532 4arz:A (3.1) BS01 GTP 3.6.5.- GO:0000329 ... Q00582 22807443
    206533 4arz:A (3.1) BS02 MG 3.6.5.- GO:0000329 ... Q00582 22807443
    206534 4arz:B (3.1) BS01 GDP 3.6.5.- GO:0000329 ... P53290 22807443
    206535 4as0:A (2.3) BS01 RPS 2.7.11.1 GO:0004672 ... P11309 22733119
    206536 4as1:A (2.02) BS01 rna 6.1.1.4 GO:0000166 ... P07813 22683997
    206537 4as2:A (2.12) BS01 MG 3.1.3.75 GO:0042597 ... Q9HTR2 22922065
    206538 4as2:B (2.12) BS01 MG 3.1.3.75 GO:0042597 ... Q9HTR2 22922065
    206539 4as2:C (2.12) BS01 MG 3.1.3.75 GO:0042597 ... Q9HTR2 22922065
    206540 4as2:D (2.12) BS01 MG 3.1.3.75 GO:0042597 ... Q9HTR2 22922065
    206541 4as3:A (2.4) BS01 MG 3.1.3.75 GO:0042597 ... Q9HTR2 22922065
    206542 4as3:B (2.4) BS01 MG 3.1.3.75 GO:0042597 ... Q9HTR2 22922065
    206543 4as3:C (2.4) BS01 MG 3.1.3.75 GO:0042597 ... Q9HTR2 22922065
    206544 4as3:D (2.4) BS01 MG 3.1.3.75 GO:0042597 ... Q9HTR2 22922065
    206545 4as4:A (1.7) BS01 PO4 3.1.3.25
    3.1.3.94
    GO:0000287 ... P29218 23027737
    206546 4as4:A (1.7) BS02 MG 3.1.3.25
    3.1.3.94
    GO:0000287 ... P29218 23027737
    206547 4as4:A (1.7) BS03 MG 3.1.3.25
    3.1.3.94
    GO:0000287 ... P29218 23027737
    206548 4as4:B (1.7) BS01 PO4 3.1.3.25
    3.1.3.94
    GO:0000287 ... P29218 23027737
    206549 4as4:B (1.7) BS02 MG 3.1.3.25
    3.1.3.94
    GO:0000287 ... P29218 23027737
    206550 4as4:B (1.7) BS03 MG 3.1.3.25
    3.1.3.94
    GO:0000287 ... P29218 23027737
    206551 4as5:A (2.43) BS01 PO4 3.1.3.25
    3.1.3.94
    GO:0000287 ... O55023 23027737
    206552 4as5:A (2.43) BS02 MG 3.1.3.25
    3.1.3.94
    GO:0000287 ... O55023 23027737
    206553 4as5:A (2.43) BS03 MG 3.1.3.25
    3.1.3.94
    GO:0000287 ... O55023 23027737
    206554 4as5:B (2.43) BS01 PO4 3.1.3.25
    3.1.3.94
    GO:0000287 ... O55023 23027737
    206555 4as5:B (2.43) BS02 MG 3.1.3.25
    3.1.3.94
    GO:0000287 ... O55023 23027737
    206556 4as5:B (2.43) BS03 MG 3.1.3.25
    3.1.3.94
    GO:0000287 ... O55023 23027737
    206557 4as5:C (2.43) BS01 PO4 3.1.3.25
    3.1.3.94
    GO:0000287 ... O55023 23027737
    206558 4as5:C (2.43) BS02 MG 3.1.3.25
    3.1.3.94
    GO:0000287 ... O55023 23027737
    206559 4as5:C (2.43) BS03 MG 3.1.3.25
    3.1.3.94
    GO:0000287 ... O55023 23027737
    206560 4as5:D (2.43) BS01 PO4 3.1.3.25
    3.1.3.94
    GO:0000287 ... O55023 23027737
    206561 4as5:D (2.43) BS02 MG 3.1.3.25
    3.1.3.94
    GO:0000287 ... O55023 23027737
    206562 4as5:D (2.43) BS03 MG 3.1.3.25
    3.1.3.94
    GO:0000287 ... O55023 23027737
    206563 4as7:A (2.4) BS01 ADP ? GO:0003777 ... P52732 23875972
    206564 4as7:A (2.4) BS02 6LX ? GO:0003777 ... P52732 23875972 MOAD: ic50=484nM
    BindingDB: IC50=0.140000nM, Ki=0.500000nM, Kd=>10.0nM
    206565 4as8:A (1.02) BS01 EDO ? GO:0006091 ... P42212 23090407
    206566 4as8:A (1.02) BS02 EDO ? GO:0006091 ... P42212 23090407
    206567 4as8:A (1.02) BS03 EDO ? GO:0006091 ... P42212 23090407
    206568 4as8:A (1.02) BS04 EDO ? GO:0006091 ... P42212 23090407
    206569 4as8:A (1.02) BS05 EDO ? GO:0006091 ... P42212 23090407
    206570 4as8:A (1.02) BS06 EDO ? GO:0006091 ... P42212 23090407
    206571 4as8:A (1.02) BS07 EDO ? GO:0006091 ... P42212 23090407
    206572 4as8:A (1.02) BS08 EDO ? GO:0006091 ... P42212 23090407
    206573 4as8:A (1.02) BS09 EDO ? GO:0006091 ... P42212 23090407
    206574 4as9:A (2.71) BS01 4QS ? GO:0005524 ... P02829 23511419
    206575 4asa:A (2.25) BS01 59C ? GO:0005524 ... P02829 23511419
    206576 4asb:A (3.08) BS01 8TO ? GO:0005524 ... P02829 23511419
    206577 4asd:A (2.03) BS01 BAX 2.7.10.1 GO:0004672 ... P35968 22988103 MOAD: Ki=0.52nM
    BindingDB: IC50=90nM, Kd=59nM, Ki=22nM, EC50=500nM
    206578 4ase:A (1.83) BS01 AV9 2.7.10.1 GO:0004672 ... P35968 22988103 MOAD: Ki=0.01nM
    206579 4asf:A (2.6) BS01 62U ? GO:0005524 ... P02829 23511419
    206580 4asg:A (2.2) BS01 814 ? GO:0005524 ... P02829 23511419
    206581 4asj:A (2.25) BS01 N6A 2.7.7.24 GO:0000271 ... Q9HU22 23138692 MOAD: Kd=0.028uM
    BindingDB: IC50=73nM
    206582 4asj:A (2.25) BS02 PO4 2.7.7.24 GO:0000271 ... Q9HU22 23138692
    206583 4asj:B (2.25) BS01 N6A 2.7.7.24 GO:0000271 ... Q9HU22 23138692 MOAD: Kd=0.028uM
    BindingDB: IC50=73nM
    206584 4asj:C (2.25) BS01 N6A 2.7.7.24 GO:0000271 ... Q9HU22 23138692 MOAD: Kd=0.028uM
    BindingDB: IC50=73nM
    206585 4asj:C (2.25) BS02 PO4 2.7.7.24 GO:0000271 ... Q9HU22 23138692
    206586 4asj:D (2.25) BS01 N6A 2.7.7.24 GO:0000271 ... Q9HU22 23138692 MOAD: Kd=0.028uM
    BindingDB: IC50=73nM
    206587 4ask:A (1.86) BS01 ZN 1.14.11.68 N/A O15054 22842901
    206588 4ask:A (1.86) BS02 K0I 1.14.11.68 N/A O15054 22842901 BindingDB: IC50=16nM
    206589 4ask:A (1.86) BS03 CO 1.14.11.68 N/A O15054 22842901
    206590 4ask:B (1.86) BS01 ZN 1.14.11.68 N/A O15054 22842901
    206591 4ask:B (1.86) BS02 K0I 1.14.11.68 N/A O15054 22842901 BindingDB: IC50=16nM
    206592 4ask:B (1.86) BS03 CO 1.14.11.68 N/A O15054 22842901
    206593 4asl:A (1.24) BS01 GAL ? N/A Q6FUW5 23035251
    206594 4asl:A (1.24) BS02 CA ? N/A Q6FUW5 23035251
    206595 4asm:B (1.5) BS01 CA 3.2.1.81 GO:0004553 ... D7GXG4 22778272
    206596 4aso:A (7.0) BS01 dna ? GO:0042802 ... Q8KNP2 23010931
    206597 4aso:A (7.0) BS02 dna ? GO:0042802 ... Q8KNP2 23010931
    206598 4aso:B (7.0) BS01 dna ? GO:0042802 ... Q8KNP2 23010931
    206599 4aso:D (7.0) BS01 dna ? GO:0042802 ... Q8KNP2 23010931
    206600 4aso:E (7.0) BS01 dna ? GO:0042802 ... Q8KNP2 23010931

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).