SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    207001 4avo:A (1.8) BS03 BGC 3.2.1.- GO:0004553 ... Q47SA9 24085303
    207002 4avo:A (1.8) BS04 BGC 3.2.1.- GO:0004553 ... Q47SA9 24085303
    207003 4avo:A (1.8) BS05 BGC 3.2.1.- GO:0004553 ... Q47SA9 24085303
    207004 4avo:A (1.8) BS06 BGC 3.2.1.- GO:0004553 ... Q47SA9 24085303
    207005 4avo:A (1.8) BS07 CA 3.2.1.- GO:0004553 ... Q47SA9 24085303
    207006 4avq:A (2.1) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207007 4avq:A (2.1) BS02 MG 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207008 4avq:B (2.1) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207009 4avq:B (2.1) BS02 MG 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207010 4avq:C (2.1) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207011 4avq:C (2.1) BS02 MG 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207012 4avq:D (2.1) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207013 4avq:D (2.1) BS02 MG 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207014 4avs:A (1.399) BS01 CA ? GO:0001849 ... P02743 25084341
    207015 4avs:A (1.399) BS02 CA ? GO:0001849 ... P02743 25084341
    207016 4avs:A (1.399) BS03 N7P ? GO:0001849 ... P02743 25084341
    207017 4avs:B (1.399) BS01 CA ? GO:0001849 ... P02743 25084341
    207018 4avs:B (1.399) BS02 CA ? GO:0001849 ... P02743 25084341
    207019 4avs:B (1.399) BS03 N7P ? GO:0001849 ... P02743 25084341
    207020 4avs:C (1.399) BS01 CA ? GO:0001849 ... P02743 25084341
    207021 4avs:C (1.399) BS02 CA ? GO:0001849 ... P02743 25084341
    207022 4avs:C (1.399) BS03 N7P ? GO:0001849 ... P02743 25084341
    207023 4avs:D (1.399) BS01 CA ? GO:0001849 ... P02743 25084341
    207024 4avs:D (1.399) BS02 CA ? GO:0001849 ... P02743 25084341
    207025 4avs:D (1.399) BS03 N7P ? GO:0001849 ... P02743 25084341
    207026 4avs:E (1.399) BS01 CA ? GO:0001849 ... P02743 25084341
    207027 4avs:E (1.399) BS02 CA ? GO:0001849 ... P02743 25084341
    207028 4avs:E (1.399) BS03 N7P ? GO:0001849 ... P02743 25084341
    207029 4avt:A (3.2) BS01 CA ? GO:0001849 ... P02743 25084341
    207030 4avt:A (3.2) BS02 CA ? GO:0001849 ... P02743 25084341
    207031 4avt:A (3.2) BS03 GHE ? GO:0001849 ... P02743 25084341
    207032 4avt:B (3.2) BS01 CA ? GO:0001849 ... P02743 25084341
    207033 4avt:B (3.2) BS02 CA ? GO:0001849 ... P02743 25084341
    207034 4avt:B (3.2) BS03 GHE ? GO:0001849 ... P02743 25084341
    207035 4avt:C (3.2) BS01 CA ? GO:0001849 ... P02743 25084341
    207036 4avt:C (3.2) BS02 CA ? GO:0001849 ... P02743 25084341
    207037 4avt:C (3.2) BS03 GHE ? GO:0001849 ... P02743 25084341
    207038 4avt:D (3.2) BS01 GHE ? GO:0001849 ... P02743 25084341
    207039 4avt:D (3.2) BS02 CA ? GO:0001849 ... P02743 25084341
    207040 4avt:D (3.2) BS03 CA ? GO:0001849 ... P02743 25084341
    207041 4avt:E (3.2) BS01 CA ? GO:0001849 ... P02743 25084341
    207042 4avt:E (3.2) BS02 CA ? GO:0001849 ... P02743 25084341
    207043 4avt:E (3.2) BS03 GHE ? GO:0001849 ... P02743 25084341
    207044 4avt:F (3.2) BS01 GHE ? GO:0001849 ... P02743 25084341
    207045 4avt:F (3.2) BS02 CA ? GO:0001849 ... P02743 25084341
    207046 4avt:F (3.2) BS03 CA ? GO:0001849 ... P02743 25084341
    207047 4avt:G (3.2) BS01 CA ? GO:0001849 ... P02743 25084341
    207048 4avt:G (3.2) BS02 CA ? GO:0001849 ... P02743 25084341
    207049 4avt:G (3.2) BS03 GHE ? GO:0001849 ... P02743 25084341
    207050 4avt:H (3.2) BS01 GHE ? GO:0001849 ... P02743 25084341
    207051 4avt:H (3.2) BS02 CA ? GO:0001849 ... P02743 25084341
    207052 4avt:H (3.2) BS03 CA ? GO:0001849 ... P02743 25084341
    207053 4avt:I (3.2) BS01 CA ? GO:0001849 ... P02743 25084341
    207054 4avt:I (3.2) BS02 CA ? GO:0001849 ... P02743 25084341
    207055 4avt:I (3.2) BS03 GHE ? GO:0001849 ... P02743 25084341
    207056 4avt:J (3.2) BS01 CA ? GO:0001849 ... P02743 25084341
    207057 4avt:J (3.2) BS02 CA ? GO:0001849 ... P02743 25084341
    207058 4avt:J (3.2) BS03 GHE ? GO:0001849 ... P02743 25084341
    207059 4avu:A (2.4) BS01 ZN 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 24900770
    207060 4avu:A (2.4) BS02 LDR 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 24900770
    207061 4avu:B (2.4) BS01 ZN 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 24900770
    207062 4avu:B (2.4) BS02 LDR 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 24900770
    207063 4avv:A (1.6) BS01 GHE ? GO:0001849 ... P02743 25084341 MOAD: Kd=0.0088uM
    207064 4avv:B (1.6) BS01 GHE ? GO:0001849 ... P02743 25084341 MOAD: Kd=0.0088uM
    207065 4avv:B (1.6) BS02 SIA ? GO:0001849 ... P02743 25084341
    207066 4avv:C (1.6) BS01 GHE ? GO:0001849 ... P02743 25084341 MOAD: Kd=0.0088uM
    207067 4avv:D (1.6) BS01 GHE ? GO:0001849 ... P02743 25084341 MOAD: Kd=0.0088uM
    207068 4avv:E (1.6) BS01 SIA ? GO:0001849 ... P02743 25084341
    207069 4avv:E (1.6) BS02 GHE ? GO:0001849 ... P02743 25084341 MOAD: Kd=0.0088uM
    207070 4avw:A (2.15) BS01 G18 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 24900770
    207071 4avw:A (2.15) BS02 ZN 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 24900770
    207072 4avw:B (2.15) BS01 G18 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 24900770
    207073 4avw:B (2.15) BS02 ZN 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 24900770
    207074 4avx:A (1.68) BS01 ZN ? GO:0035091 ... O14964 N/A
    207075 4avx:A (1.68) BS02 ZN ? GO:0035091 ... O14964 N/A
    207076 4avx:A (1.68) BS03 ITP ? GO:0035091 ... O14964 N/A
    207077 4aw0:A (1.43) BS01 ATP 2.7.11.1 GO:0004672 ... O15530 22999883
    207078 4aw0:A (1.43) BS02 MJF 2.7.11.1 GO:0004672 ... O15530 22999883 BindingDB: IC50=2.6e+4nM
    207079 4aw0:A (1.43) BS03 MG 2.7.11.1 GO:0004672 ... O15530 22999883
    207080 4aw1:A (1.68) BS01 ATP 2.7.11.1 GO:0004672 ... O15530 22999883
    207081 4aw1:A (1.68) BS02 21O 2.7.11.1 GO:0004672 ... O15530 22999883 BindingDB: IC50=3.9e+4nM, EC50=85800nM
    207082 4aw2:A (1.7) BS01 22E 2.7.11.1 GO:0004672 ... O54874 N/A
    207083 4aw3:A (2.05) BS01 HEM 1.14.-.- GO:0004497 ... Q59523 22952225
    207084 4aw3:A (2.05) BS02 MYV 1.14.-.- GO:0004497 ... Q59523 22952225
    207085 4aw3:B (2.05) BS01 HEM 1.14.-.- GO:0004497 ... Q59523 22952225
    207086 4aw3:B (2.05) BS02 MYV 1.14.-.- GO:0004497 ... Q59523 22952225
    207087 4aw5:A (2.33) BS01 30K 2.7.10.1 GO:0004672 ... P54760 22765894 MOAD: ic50=765nM
    207088 4aw6:A (3.4) BS01 ZN 3.4.24.84 GO:0003690 ... O75844 23539603
    207089 4aw6:B (3.4) BS01 ZN 3.4.24.84 GO:0003690 ... O75844 23539603
    207090 4aw6:D (3.4) BS01 ZN 3.4.24.84 GO:0003690 ... O75844 23539603
    207091 4aw6:E (3.4) BS01 ZN 3.4.24.84 GO:0003690 ... O75844 23539603
    207092 4aw7:A (1.33) BS01 GLA 3.2.1.178 N/A B5CY96 23150581
    207093 4aw7:A (1.33) BS02 L6S 3.2.1.178 N/A B5CY96 23150581
    207094 4aw7:A (1.33) BS03 GAL 3.2.1.178 N/A B5CY96 23150581
    207095 4aw7:A (1.33) BS04 L6S 3.2.1.178 N/A B5CY96 23150581
    207096 4aw7:A (1.33) BS05 CA 3.2.1.178 N/A B5CY96 23150581
    207097 4aw7:A (1.33) BS06 GAL 3.2.1.178 N/A B5CY96 23150581
    207098 4aw8:A (2.0) BS01 ZN ? GO:0008270 ... A0A315GY36 24128931
    207099 4aw9:A (2.2) BS01 peptide 3.4.22.34 GO:0006508 ... Q99538 23776206
    207100 4awa:A (2.5) BS01 peptide 3.4.22.34 GO:0006508 ... Q99538 23776206
    207101 4awb:A (2.7) BS01 peptide 3.4.22.34 GO:0006508 ... Q99538 23776206
    207102 4awb:A (2.7) BS02 peptide 3.4.22.34 GO:0006508 ... Q99538 23776206
    207103 4awb:B (2.7) BS01 peptide 3.4.22.34 GO:0006508 ... Q99538 23776206
    207104 4awb:B (2.7) BS02 peptide 3.4.22.34 GO:0006508 ... Q99538 23776206
    207105 4awd:A (2.4) BS01 CA 3.2.1.178 GO:0004553 ... B5CY92 23150581
    207106 4awd:B (2.4) BS01 CA 3.2.1.178 GO:0004553 ... B5CY92 23150581
    207107 4awf:A (2.3) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207108 4awf:A (2.3) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207109 4awf:A (2.3) BS03 XI7 3.1.-.- GO:0003723 ... C3W5S0 22876177 MOAD: ic50=2.7uM
    207110 4awf:B (2.3) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207111 4awf:B (2.3) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207112 4awf:B (2.3) BS03 XI7 3.1.-.- GO:0003723 ... C3W5S0 22876177 MOAD: ic50=2.7uM
    207113 4awf:C (2.3) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207114 4awf:C (2.3) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207115 4awf:C (2.3) BS03 XI7 3.1.-.- GO:0003723 ... C3W5S0 22876177 MOAD: ic50=2.7uM
    207116 4awf:D (2.3) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207117 4awf:D (2.3) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207118 4awf:D (2.3) BS03 XI7 3.1.-.- GO:0003723 ... C3W5S0 22876177 MOAD: ic50=2.7uM
    207119 4awg:A (2.6) BS01 CI3 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207120 4awg:A (2.6) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207121 4awg:A (2.6) BS03 MN 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207122 4awg:B (2.6) BS01 CI3 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207123 4awg:B (2.6) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207124 4awg:B (2.6) BS03 MN 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207125 4awg:C (2.6) BS01 CI3 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207126 4awg:C (2.6) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207127 4awg:C (2.6) BS03 MN 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207128 4awg:D (2.6) BS01 CI3 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207129 4awg:D (2.6) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207130 4awg:D (2.6) BS03 MN 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207131 4awh:A (2.05) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207132 4awh:A (2.05) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207133 4awh:A (2.05) BS03 U5P 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207134 4awh:B (2.05) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207135 4awh:B (2.05) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207136 4awh:B (2.05) BS03 U5P 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207137 4awh:C (2.05) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207138 4awh:C (2.05) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207139 4awh:C (2.05) BS03 U5P 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207140 4awh:D (2.05) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207141 4awh:D (2.05) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207142 4awh:D (2.05) BS03 U5P 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207143 4awi:A (1.91) BS01 AQ2 2.7.11.24 GO:0004672 ... P45983 22801646 MOAD: ic50=1uM
    207144 4awj:C (2.5) BS01 V6F ? N/A P40337 23102223 MOAD: Kd~10000uM
    BindingDB: Kd=4900000nM
    207145 4awj:F (2.5) BS01 V6F ? N/A P40337 23102223 MOAD: Kd~10000uM
    BindingDB: Kd=4900000nM
    207146 4awj:I (2.5) BS01 V6F ? N/A P40337 23102223 MOAD: Kd~10000uM
    BindingDB: Kd=4900000nM
    207147 4awj:L (2.5) BS01 V6F ? N/A P40337 23102223 MOAD: Kd~10000uM
    BindingDB: Kd=4900000nM
    207148 4awk:A (1.9) BS01 CI1 3.1.-.- GO:0003723 ... C3W5S0 22876177 MOAD: ic50=0.13uM
    207149 4awk:A (1.9) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207150 4awk:A (1.9) BS03 MN 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207151 4awl:A (3.08) BS01 dna ? GO:0003677 ... P23511 23332751
    207152 4awl:A (3.08) BS02 dna ? GO:0003677 ... P23511 23332751
    207153 4awl:B (3.08) BS01 dna ? GO:0001228 ... P25208 23332751
    207154 4awl:B (3.08) BS02 dna ? GO:0001228 ... P25208 23332751
    207155 4awl:C (3.08) BS01 dna ? GO:0003677 ... Q13952 23332751
    207156 4awl:C (3.08) BS02 dna ? GO:0003677 ... Q13952 23332751
    207157 4awm:A (2.6) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207158 4awm:A (2.6) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207159 4awm:A (2.6) BS03 KDH 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207160 4awm:A (2.6) BS04 KDH 3.1.-.- GO:0003723 ... C3W5S0 22876177
    207161 4awn:A (1.95) BS01 CA 3.1.21.1 GO:0002283 ... P24855 23215638
    207162 4awn:A (1.95) BS02 CA 3.1.21.1 GO:0002283 ... P24855 23215638
    207163 4awn:A (1.95) BS03 PO4 3.1.21.1 GO:0002283 ... P24855 23215638
    207164 4awo:A (1.7) BS01 99B 3.6.4.10 GO:0005524 ... P07900 22877636 MOAD: ic50=24nM
    207165 4awo:B (1.7) BS01 99B 3.6.4.10 GO:0005524 ... P07900 22877636 MOAD: ic50=24nM
    207166 4awp:A (1.82) BS01 99A 3.6.4.10 GO:0005524 ... P07900 22877636 MOAD: ic50=81nM
    207167 4awp:B (1.82) BS01 99A 3.6.4.10 GO:0005524 ... P07900 22877636 MOAD: ic50=81nM
    207168 4awq:A (1.6) BS01 592 3.6.4.10 GO:0005524 ... P07900 22877636 MOAD: ic50=479nM
    BindingDB: IC50=479nM
    207169 4awq:B (1.6) BS01 592 3.6.4.10 GO:0005524 ... P07900 22877636 MOAD: ic50=479nM
    BindingDB: IC50=479nM
    207170 4aws:A (1.0) BS01 FMN 1.6.99.1 GO:0005829 ... Q8EEC8 N/A
    207171 4aws:A (1.0) BS02 01F 1.6.99.1 GO:0005829 ... Q8EEC8 N/A
    207172 4awt:A (0.98) BS01 FMN 1.6.99.1 GO:0005829 ... Q8EEC8 N/A
    207173 4awt:A (0.98) BS02 01F 1.6.99.1 GO:0005829 ... Q8EEC8 N/A
    207174 4awu:A (1.69) BS01 FMN 1.6.99.1 GO:0005829 ... Q8EEC8 N/A
    207175 4awu:A (1.69) BS02 4CH 1.6.99.1 GO:0005829 ... Q8EEC8 N/A
    207176 4awu:A (1.69) BS03 4CH 1.6.99.1 GO:0005829 ... Q8EEC8 N/A
    207177 4awu:A (1.69) BS04 4CH 1.6.99.1 GO:0005829 ... Q8EEC8 N/A
    207178 4awy:B (1.6) BS01 ZN ? GO:0008800 ... B5DCA0 22664968
    207179 4awy:B (1.6) BS02 ZN ? GO:0008800 ... B5DCA0 22664968
    207180 4awy:B (1.6) BS03 MG ? GO:0008800 ... B5DCA0 22664968
    207181 4awy:B (1.6) BS04 CA ? GO:0008800 ... B5DCA0 22664968
    207182 4awy:B (1.6) BS05 MG ? GO:0008800 ... B5DCA0 22664968
    207183 4awz:A (1.8) BS01 CA ? GO:0008800 ... B5DCA0 22664968
    207184 4awz:A (1.8) BS02 MG ? GO:0008800 ... B5DCA0 22664968
    207185 4awz:A (1.8) BS03 ZN ? GO:0008800 ... B5DCA0 22664968
    207186 4awz:A (1.8) BS04 ZN ? GO:0008800 ... B5DCA0 22664968
    207187 4awz:B (1.8) BS01 CA ? GO:0008800 ... B5DCA0 22664968
    207188 4awz:B (1.8) BS02 ZN ? GO:0008800 ... B5DCA0 22664968
    207189 4awz:B (1.8) BS03 ZN ? GO:0008800 ... B5DCA0 22664968
    207190 4awz:C (1.8) BS01 CA ? GO:0008800 ... B5DCA0 22664968
    207191 4awz:C (1.8) BS02 ZN ? GO:0008800 ... B5DCA0 22664968
    207192 4awz:C (1.8) BS03 ZN ? GO:0008800 ... B5DCA0 22664968
    207193 4ax0:B (1.74) BS01 ZN ? GO:0008800 ... B5DCA0 22664968
    207194 4ax0:B (1.74) BS02 ZN ? GO:0008800 ... B5DCA0 22664968
    207195 4ax0:B (1.74) BS03 CA ? GO:0008800 ... B5DCA0 22664968
    207196 4ax1:B (1.4) BS01 ZN ? GO:0008800 ... B5DCA0 22664968
    207197 4ax1:B (1.4) BS02 ZN ? GO:0008800 ... B5DCA0 22664968
    207198 4ax1:B (1.4) BS03 CA ? GO:0008800 ... B5DCA0 22664968
    207199 4ax3:A (1.6) BS01 CU 1.7.2.1 GO:0005507 ... B2UHR8 23535590
    207200 4ax3:A (1.6) BS02 CU 1.7.2.1 GO:0005507 ... B2UHR8 23535590

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).