SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    214001 4cqw:E (2.3) BS01 SIA ? GO:0019031 ... Q207Z6 24889237
    214002 4cqx:A (2.3) BS01 SIA ? GO:0019031 ... Q207Z6 24889237
    214003 4cqx:C (2.3) BS01 GAL ? GO:0019031 ... Q207Z6 24889237
    214004 4cqx:C (2.3) BS02 SIA ? GO:0019031 ... Q207Z6 24889237
    214005 4cqx:E (2.3) BS01 GAL ? GO:0019031 ... Q207Z6 24889237
    214006 4cqx:E (2.3) BS02 SIA ? GO:0019031 ... Q207Z6 24889237
    214007 4cqy:A (2.05) BS01 SIA ? GO:0019031 ... Q207Z6 24889237
    214008 4cqy:C (2.05) BS01 SIA ? GO:0019031 ... Q207Z6 24889237
    214009 4cqy:E (2.05) BS01 SIA ? GO:0019031 ... Q207Z6 24889237
    214010 4cqz:A (2.7) BS01 SIA ? GO:0019031 ... Q6DQ34 24889237
    214011 4cr2:R (7.7) BS01 peptide ? GO:0005198 ... Q06103 24706844
    214012 4cr3:R (9.3) BS01 peptide ? GO:0005198 ... Q06103 24706844
    214013 4cr4:R (8.8) BS01 peptide ? GO:0005198 ... Q06103 24706844
    214014 4cr5:A (2.0) BS01 0TU 3.4.21.27 GO:0004252 ... P03951 25629509 MOAD: Ki=70uM
    BindingDB: Ki=70000nM, IC50=140000nM
    214015 4cr6:A (1.9) BS01 MAN 1.1.1.233 GO:0050123 ... P22441 24969681
    214016 4cr6:B (1.9) BS01 MAN 1.1.1.233 GO:0050123 ... P22441 24969681
    214017 4cr6:C (1.9) BS01 MAN 1.1.1.233 GO:0050123 ... P22441 24969681
    214018 4cr6:D (1.9) BS01 MAN 1.1.1.233 GO:0050123 ... P22441 24969681
    214019 4cr7:B (2.15) BS01 MAN 1.1.1.233 GO:0050123 ... P22441 24969681
    214020 4cr7:D (2.15) BS01 MAN 1.1.1.233 GO:0050123 ... P22441 24969681
    214021 4cr7:M (2.15) BS01 MAN 1.1.1.233 GO:0050123 ... P22441 24969681
    214022 4cr7:N (2.15) BS01 MAN 1.1.1.233 GO:0050123 ... P22441 24969681
    214023 4cr7:P (2.15) BS01 MAN 1.1.1.233 GO:0050123 ... P22441 24969681
    214024 4cr8:A (2.2) BS01 NAD 1.1.1.233 GO:0050123 ... P22441 24969681
    214025 4cr8:B (2.2) BS01 NAD 1.1.1.233 GO:0050123 ... P22441 24969681
    214026 4cr8:C (2.2) BS01 NAD 1.1.1.233 GO:0050123 ... P22441 24969681
    214027 4cr8:D (2.2) BS01 NAD 1.1.1.233 GO:0050123 ... P22441 24969681
    214028 4cr8:E (2.2) BS01 NAD 1.1.1.233 GO:0050123 ... P22441 24969681
    214029 4cr8:F (2.2) BS01 NAD 1.1.1.233 GO:0050123 ... P22441 24969681
    214030 4cr8:G (2.2) BS01 NAD 1.1.1.233 GO:0050123 ... P22441 24969681
    214031 4cr8:H (2.2) BS01 NAD 1.1.1.233 GO:0050123 ... P22441 24969681
    214032 4cr9:A (1.7) BS01 OTW 3.4.21.27 GO:0004252 ... P03951 25629509 MOAD: Ki=80uM
    214033 4cra:A (1.8) BS01 XJ8 3.4.21.27 GO:0004252 ... P03951 25629509 MOAD: Ki=0.06uM
    214034 4crb:A (1.85) BS01 7P0 3.4.21.27 GO:0004252 ... P03951 25629509 MOAD: Ki=0.027uM
    BindingDB: Ki=1.6nM
    214035 4crc:A (1.6) BS01 OTM 3.4.21.27 GO:0004252 ... P03951 25629509 MOAD: Ki=0.0019uM
    BindingDB: Ki=1.4nM
    214036 4crd:A (2.1) BS01 OTJ 3.4.21.27 GO:0004252 ... P03951 25629509 MOAD: Ki=0.08uM
    214037 4cre:A (1.73) BS01 MVN 3.4.21.27 GO:0004252 ... P03951 25629509
    214038 4crf:A (2.3) BS01 R9B 3.4.21.27 GO:0004252 ... P03951 25629509 MOAD: Ki=0.0005uM
    BindingDB: IC50=1.000000nM, Ki=0.500000nM
    214039 4crg:A (1.25) BS01 J4X 3.4.21.27 GO:0004252 ... P03951 25629509
    214040 4cri:A (2.35) BS01 peptide ? N/A Q12888 25049398
    214041 4cri:B (2.35) BS01 peptide ? N/A Q12888 25049398
    214042 4cri:B (2.35) BS02 peptide ? N/A Q12888 25049398
    214043 4crj:A (2.0) BS01 APC N/A GO:0003848 ... N/A 25357262
    214044 4crj:A (2.0) BS02 MG N/A GO:0003848 ... N/A 25357262
    214045 4crj:A (2.0) BS03 MG N/A GO:0003848 ... N/A 25357262
    214046 4crj:A (2.0) BS04 YH5 N/A GO:0003848 ... N/A 25357262 MOAD: Kd=1.1uM
    214047 4crl:A (2.4) BS01 C1I 2.7.11.22
    2.7.11.23
    GO:0004672 ... P49336 26416749 MOAD: Kd=195pM
    BindingDB: Kd=17nM, IC50=12nM
    214048 4crm:P (8.75) BS01 ATP ? GO:0000054 ... Q03195 25001285
    214049 4crm:P (8.75) BS02 SF4 ? GO:0000054 ... Q03195 25001285
    214050 4crm:P (8.75) BS03 SF4 ? GO:0000054 ... Q03195 25001285
    214051 4crm:P (8.75) BS04 ADP ? GO:0000054 ... Q03195 25001285
    214052 4crm:P (8.75) BS05 MG ? GO:0000054 ... Q03195 25001285
    214053 4crn:P (9.1) BS01 GNP 3.6.5.- GO:0000288 ... P05453 25001285
    214054 4crq:A (1.5) BS01 CA 3.2.1.39 GO:0004553 ... G0L2L9 25664729
    214055 4crq:A (1.5) BS02 CL 3.2.1.39 GO:0004553 ... G0L2L9 25664729
    214056 4crq:A (1.5) BS03 ACT 3.2.1.39 GO:0004553 ... G0L2L9 25664729
    214057 4crq:B (1.5) BS01 CA 3.2.1.39 GO:0004553 ... G0L2L9 25664729
    214058 4crq:B (1.5) BS02 ACT 3.2.1.39 GO:0004553 ... G0L2L9 25664729
    214059 4crq:B (1.5) BS03 CL 3.2.1.39 GO:0004553 ... G0L2L9 25664729
    214060 4crs:A (2.75) BS01 AGS 2.7.11.13 GO:0004672 ... Q16513 N/A
    214061 4crt:A (1.8) BS01 FAD 1.4.3.21
    1.4.3.4
    GO:0005515 ... P27338 24642166
    214062 4crt:A (1.8) BS02 ASS 1.4.3.21
    1.4.3.4
    GO:0005515 ... P27338 24642166
    214063 4crt:B (1.8) BS01 FAD 1.4.3.21
    1.4.3.4
    GO:0005515 ... P27338 24642166
    214064 4crt:B (1.8) BS02 ASS 1.4.3.21
    1.4.3.4
    GO:0005515 ... P27338 24642166
    214065 4crv:B (2.05) BS01 TRP ? GO:0006402 ... Q92600 24768540
    214066 4crx:A (2.2) BS01 dna ? GO:0003677 ... P06956 10377382
    214067 4crx:A (2.2) BS02 dna ? GO:0003677 ... P06956 10377382
    214068 4crx:B (2.2) BS01 dna ? GO:0003677 ... P06956 10377382
    214069 4crx:B (2.2) BS02 dna ? GO:0003677 ... P06956 10377382
    214070 4cry:B (1.61) BS01 ACO ? GO:0005515 ... P37613 N/A
    214071 4cry:B (1.61) BS02 MG ? GO:0005515 ... P37613 N/A
    214072 4cry:G (1.61) BS01 peptide 4.1.1.11 GO:0004068 ... P0A790 N/A
    214073 4crz:B (1.7) BS01 ACO ? GO:0005515 ... P37613 25910242 MOAD: Kd=35nM
    214074 4crz:B (1.7) BS02 MG ? GO:0005515 ... P37613 25910242
    214075 4cs0:B (2.1) BS01 ACO ? GO:0005515 ... P37613 25910242 MOAD: Kd=157nM
    214076 4cs0:B (2.1) BS02 MG ? GO:0005515 ... P37613 25910242
    214077 4cs3:A (1.499) BS01 LYS 6.1.1.26 GO:0000049 ... Q8PWY1 24737732
    214078 4cs3:A (1.499) BS02 AMP 6.1.1.26 GO:0000049 ... Q8PWY1 24737732
    214079 4cs3:A (1.499) BS03 FU0 6.1.1.26 GO:0000049 ... Q8PWY1 24737732
    214080 4cs3:A (1.499) BS04 POP 6.1.1.26 GO:0000049 ... Q8PWY1 24737732
    214081 4cs3:A (1.499) BS05 MG 6.1.1.26 GO:0000049 ... Q8PWY1 24737732
    214082 4cs4:A (1.349) BS01 ANP 6.1.1.26 GO:0000049 ... Q8PWY1 24737732
    214083 4cs4:A (1.349) BS02 MG 6.1.1.26 GO:0000049 ... Q8PWY1 24737732
    214084 4cs4:A (1.349) BS03 AXZ 6.1.1.26 GO:0000049 ... Q8PWY1 24737732
    214085 4cs4:A (1.349) BS04 PO4 6.1.1.26 GO:0000049 ... Q8PWY1 24737732
    214086 4cs7:A (2.47) BS01 ZN ? GO:0000166 ... Q8QN58 24842877
    214087 4cs7:B (2.47) BS01 ZN ? GO:0000166 ... Q8QN58 24842877
    214088 4cs7:C (2.47) BS01 ZN ? GO:0000166 ... Q8QN58 24842877
    214089 4cs7:E (2.47) BS01 ZN ? GO:0000166 ... Q8QN58 24842877
    214090 4cs8:A (2.1) BS01 ZN ? GO:0000166 ... Q8QN58 24842877
    214091 4cs8:B (2.1) BS01 ZN ? GO:0000166 ... Q8QN58 24842877
    214092 4cs8:C (2.1) BS01 ZN ? GO:0000166 ... Q8QN58 24842877
    214093 4cs8:E (2.1) BS01 ZN ? GO:0000166 ... Q8QN58 24842877
    214094 4cs9:A (2.01) BS01 ZN ? GO:0000166 ... Q8QN58 24842877
    214095 4cs9:A (2.01) BS02 AMP ? GO:0000166 ... Q8QN58 24842877
    214096 4cs9:B (2.01) BS01 ZN ? GO:0000166 ... Q8QN58 24842877
    214097 4cs9:B (2.01) BS02 AMP ? GO:0000166 ... Q8QN58 24842877
    214098 4cs9:C (2.01) BS01 ZN ? GO:0000166 ... Q8QN58 24842877
    214099 4cs9:C (2.01) BS02 AMP ? GO:0000166 ... Q8QN58 24842877
    214100 4cs9:C (2.01) BS03 AMP ? GO:0000166 ... Q8QN58 24842877
    214101 4cs9:E (2.01) BS01 ZN ? GO:0000166 ... Q8QN58 24842877
    214102 4csa:A (2.28) BS01 ZN ? GO:0000166 ... Q8QN58 24842877
    214103 4csa:B (2.28) BS01 ZN ? GO:0000166 ... Q8QN58 24842877
    214104 4csa:C (2.28) BS01 dna ? GO:0000166 ... Q8QN58 24842877
    214105 4csa:C (2.28) BS02 ZN ? GO:0000166 ... Q8QN58 24842877
    214106 4csa:E (2.28) BS01 ZN ? GO:0000166 ... Q8QN58 24842877
    214107 4csc:A (1.9) BS01 MLT 2.3.3.1 GO:0005739 ... P23007 2043640
    214108 4csc:A (1.9) BS02 ACO 2.3.3.1 GO:0005739 ... P23007 2043640
    214109 4csd:A (1.35) BS01 MFU ? N/A Q8XXK6 25044646 MOAD: Kd=1.23uM
    214110 4csd:A (1.35) BS02 MFU ? N/A Q8XXK6 25044646 MOAD: Kd=1.23uM
    214111 4csd:A (1.35) BS03 MFU ? N/A Q8XXK6 25044646 MOAD: Kd=1.23uM
    214112 4csd:A (1.35) BS04 MFU ? N/A Q8XXK6 25044646 MOAD: Kd=1.23uM
    214113 4csd:A (1.35) BS05 MFU ? N/A Q8XXK6 25044646 MOAD: Kd=1.23uM
    214114 4csd:A (1.35) BS06 MFU ? N/A Q8XXK6 25044646 MOAD: Kd=1.23uM
    214115 4csd:B (1.35) BS01 MFU ? N/A Q8XXK6 25044646 MOAD: Kd=1.23uM
    214116 4csd:B (1.35) BS02 MFU ? N/A Q8XXK6 25044646 MOAD: Kd=1.23uM
    214117 4csd:B (1.35) BS03 MFU ? N/A Q8XXK6 25044646 MOAD: Kd=1.23uM
    214118 4csd:B (1.35) BS04 MFU ? N/A Q8XXK6 25044646 MOAD: Kd=1.23uM
    214119 4csd:B (1.35) BS05 MFU ? N/A Q8XXK6 25044646 MOAD: Kd=1.23uM
    214120 4csd:B (1.35) BS06 MFU ? N/A Q8XXK6 25044646 MOAD: Kd=1.23uM
    214121 4cse:A (3.3) BS01 peptide ? N/A Q9CQJ2 24794838
    214122 4cse:B (3.3) BS01 peptide ? N/A Q9CQJ2 24794838
    214123 4csf:A (2.598) BS01 rna ? GO:0003723 ... P21701 24688060
    214124 4csf:B (2.598) BS01 rna ? GO:0003723 ... P21701 24688060
    214125 4csf:B (2.598) BS02 rna ? GO:0003723 ... P21701 24688060
    214126 4csf:C (2.598) BS01 rna ? GO:0003723 ... P21701 24688060
    214127 4csf:D (2.598) BS01 rna ? GO:0003723 ... P21701 24688060
    214128 4csf:D (2.598) BS02 rna ? GO:0003723 ... P21701 24688060
    214129 4csf:E (2.598) BS01 rna ? GO:0003723 ... P21701 24688060
    214130 4csf:F (2.598) BS01 rna ? GO:0003723 ... P21701 24688060
    214131 4csf:F (2.598) BS02 rna ? GO:0003723 ... P21701 24688060
    214132 4csf:G (2.598) BS01 rna ? GO:0003723 ... P21701 24688060
    214133 4csf:H (2.598) BS01 rna ? GO:0003723 ... P21701 24688060
    214134 4csf:H (2.598) BS02 rna ? GO:0003723 ... P21701 24688060
    214135 4csf:I (2.598) BS01 rna ? GO:0003723 ... P21701 24688060
    214136 4csf:J (2.598) BS01 rna ? GO:0003723 ... P21701 24688060
    214137 4csf:J (2.598) BS02 rna ? GO:0003723 ... P21701 24688060
    214138 4csf:K (2.598) BS01 rna ? GO:0003723 ... P21701 24688060
    214139 4csf:L (2.598) BS01 rna ? GO:0003723 ... P21701 24688060
    214140 4csf:L (2.598) BS02 rna ? GO:0003723 ... P21701 24688060
    214141 4csf:M (2.598) BS01 rna ? GO:0003723 ... P21701 24688060
    214142 4csf:N (2.598) BS01 rna ? GO:0003723 ... P21701 24688060
    214143 4csf:N (2.598) BS02 rna ? GO:0003723 ... P21701 24688060
    214144 4csf:O (2.598) BS01 rna ? GO:0003723 ... P21701 24688060
    214145 4csf:P (2.598) BS01 rna ? GO:0003723 ... P21701 24688060
    214146 4csf:Q (2.598) BS01 rna ? GO:0003723 ... P21701 24688060
    214147 4csf:R (2.598) BS01 rna ? GO:0003723 ... P21701 24688060
    214148 4csf:R (2.598) BS02 rna ? GO:0003723 ... P21701 24688060
    214149 4csf:S (2.598) BS01 rna ? GO:0003723 ... P21701 24688060
    214150 4csf:T (2.598) BS01 rna ? GO:0003723 ... P21701 24688060
    214151 4csf:T (2.598) BS02 rna ? GO:0003723 ... P21701 24688060
    214152 4csf:U (2.598) BS01 rna ? GO:0003723 ... P21701 24688060
    214153 4csf:V (2.598) BS01 rna ? GO:0003723 ... P21701 24688060
    214154 4csf:V (2.598) BS02 rna ? GO:0003723 ... P21701 24688060
    214155 4csf:W (2.598) BS01 rna ? GO:0003723 ... P21701 24688060
    214156 4csf:X (2.598) BS01 rna ? GO:0003723 ... P21701 24688060
    214157 4csf:X (2.598) BS02 rna ? GO:0003723 ... P21701 24688060
    214158 4csh:A (1.79) BS01 CA ? N/A Q6Y7T6 25064136
    214159 4csh:B (1.79) BS01 CA ? N/A Q6Y7T6 25064136
    214160 4csh:C (1.79) BS01 CA ? N/A Q6Y7T6 25064136
    214161 4csh:D (1.79) BS01 CA ? N/A Q6Y7T6 25064136
    214162 4csj:A (2.3) BS01 peptide ? N/A P04150 24755427
    214163 4csj:A (2.3) BS02 NN7 ? N/A P04150 24755427 MOAD: ic50=4.9nM
    BindingDB: IC50=1.5nM
    214164 4csm:A (2.8) BS01 TSA 5.4.99.5 GO:0004106 ... P32178 9384560
    214165 4csm:B (2.8) BS01 TSA 5.4.99.5 GO:0004106 ... P32178 9384560
    214166 4csp:A (1.7) BS01 CU 1.7.2.1 GO:0005507 ... O68601 25022223
    214167 4csp:A (1.7) BS02 CU 1.7.2.1 GO:0005507 ... O68601 25022223
    214168 4csp:A (1.7) BS03 ZN 1.7.2.1 GO:0005507 ... O68601 25022223
    214169 4csp:F (1.7) BS01 CU 1.7.2.1 GO:0005507 ... O68601 25022223
    214170 4csp:F (1.7) BS02 CU 1.7.2.1 GO:0005507 ... O68601 25022223
    214171 4csp:F (1.7) BS03 ZN 1.7.2.1 GO:0005507 ... O68601 25022223
    214172 4css:A (1.069) BS01 CWX ? GO:0007155 ... P08191 25666045 MOAD: Kd=3.5nM
    214173 4cst:A (1.1) BS01 CWK ? GO:0007155 ... P08191 25666045 MOAD: Kd=1.3nM
    214174 4csu:0 (5.5) BS01 rna ? GO:0000027 ... P0A7M2 24844575
    214175 4csu:1 (5.5) BS01 rna ? GO:0000027 ... P0A7M6 24844575
    214176 4csu:2 (5.5) BS01 rna ? GO:0000027 ... P0AG51 24844575
    214177 4csu:2 (5.5) BS02 rna ? GO:0000027 ... P0AG51 24844575
    214178 4csu:3 (5.5) BS01 rna ? GO:0000027 ... P0A7N4 24844575
    214179 4csu:4 (5.5) BS01 rna ? GO:0000027 ... P0A7N9 24844575
    214180 4csu:5 (5.5) BS01 rna ? GO:0000027 ... P0A7L0 24844575
    214181 4csu:6 (5.5) BS01 rna ? GO:0002181 ... P0A7P5 24844575
    214182 4csu:7 (5.5) BS01 rna ? GO:0002181 ... P0A7Q1 24844575
    214183 4csu:8 (5.5) BS01 rna ? GO:0002181 ... P0A7Q6 24844575
    214184 4csu:9 (5.5) BS01 rna 3.6.5.- GO:0000027 ... P42641 24844575
    214185 4csu:9 (5.5) BS02 rna 3.6.5.- GO:0000027 ... P42641 24844575
    214186 4csu:C (5.5) BS01 rna ? GO:0000027 ... P60422 24844575
    214187 4csu:D (5.5) BS01 rna ? GO:0000027 ... P60438 24844575
    214188 4csu:E (5.5) BS01 rna ? GO:0001070 ... P60723 24844575
    214189 4csu:F (5.5) BS01 rna ? GO:0000027 ... P62399 24844575
    214190 4csu:F (5.5) BS02 rna ? GO:0000027 ... P62399 24844575
    214191 4csu:G (5.5) BS01 rna ? GO:0000027 ... P0AG55 24844575
    214192 4csu:H (5.5) BS01 rna ? GO:0002181 ... P0A7R1 24844575
    214193 4csu:I (5.5) BS01 rna ? GO:0000027 ... P0A7J7 24844575
    214194 4csu:J (5.5) BS01 rna ? GO:0002181 ... P0AA10 24844575
    214195 4csu:K (5.5) BS01 rna ? GO:0002181 ... P0ADY3 24844575
    214196 4csu:L (5.5) BS01 rna ? GO:0002181 ... P02413 24844575
    214197 4csu:M (5.5) BS01 rna ? GO:0000027 ... P0ADY7 24844575
    214198 4csu:M (5.5) BS02 rna ? GO:0000027 ... P0ADY7 24844575
    214199 4csu:N (5.5) BS01 rna ? GO:0000027 ... P0AG44 24844575
    214200 4csu:O (5.5) BS01 rna ? GO:0002181 ... P0C018 24844575

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).