SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 1072 1073 1074 1075 1076 1077 1078 1079 1080 1081 1082 1083 1084 1085 1086 1087 1088 1089 1090 1091 1092 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    216201 4d67:L (9.0) BS02 rna N/A GO:0003735 ... N/A 25601755
    216202 4d67:M (9.0) BS01 rna N/A GO:0003723 ... N/A 25601755
    216203 4d67:N (9.0) BS01 rna N/A GO:0003735 ... N/A 25601755
    216204 4d67:N (9.0) BS02 rna N/A GO:0003735 ... N/A 25601755
    216205 4d67:O (9.0) BS01 rna N/A GO:0003735 ... N/A 25601755
    216206 4d67:P (9.0) BS01 rna N/A GO:0003735 ... N/A 25601755
    216207 4d67:P (9.0) BS02 rna N/A GO:0003735 ... N/A 25601755
    216208 4d67:Q (9.0) BS01 rna N/A GO:0003735 ... N/A 25601755
    216209 4d67:R (9.0) BS01 rna N/A GO:0003723 ... N/A 25601755
    216210 4d67:S (9.0) BS01 rna N/A GO:0003735 ... N/A 25601755
    216211 4d67:S (9.0) BS02 rna N/A GO:0003735 ... N/A 25601755
    216212 4d67:T (9.0) BS01 rna N/A GO:0003735 ... N/A 25601755
    216213 4d67:T (9.0) BS02 rna N/A GO:0003735 ... N/A 25601755
    216214 4d67:U (9.0) BS01 rna N/A GO:0003735 ... N/A 25601755
    216215 4d67:V (9.0) BS01 rna N/A GO:0003735 ... N/A 25601755
    216216 4d67:W (9.0) BS01 rna N/A GO:0003735 ... N/A 25601755
    216217 4d67:X (9.0) BS01 rna N/A GO:0003735 ... N/A 25601755
    216218 4d67:X (9.0) BS02 rna N/A GO:0003735 ... N/A 25601755
    216219 4d67:Y (9.0) BS01 rna N/A GO:0003723 ... N/A 25601755
    216220 4d67:Y (9.0) BS02 rna N/A GO:0003723 ... N/A 25601755
    216221 4d67:Z (9.0) BS01 rna N/A GO:0003735 ... N/A 25601755
    216222 4d67:a (9.0) BS01 rna N/A GO:0003735 ... N/A 25601755
    216223 4d67:b (9.0) BS01 rna N/A GO:0003735 ... N/A 25601755
    216224 4d67:c (9.0) BS01 rna N/A GO:0003723 ... N/A 25601755
    216225 4d67:d (9.0) BS01 rna N/A GO:0003735 ... N/A 25601755
    216226 4d67:e (9.0) BS01 rna N/A GO:0003735 ... N/A 25601755
    216227 4d67:f (9.0) BS01 rna N/A GO:0003735 ... N/A 25601755
    216228 4d67:g (9.0) BS01 rna N/A GO:0003735 ... N/A 25601755
    216229 4d67:h (9.0) BS01 rna N/A GO:0000463 ... N/A 25601755
    216230 4d67:h (9.0) BS02 rna N/A GO:0000463 ... N/A 25601755
    216231 4d67:i (9.0) BS01 rna N/A GO:0003735 ... N/A 25601755
    216232 4d67:j (9.0) BS01 rna N/A GO:0003735 ... N/A 25601755
    216233 4d67:j (9.0) BS02 rna N/A GO:0003735 ... N/A 25601755
    216234 4d67:k (9.0) BS01 rna N/A GO:0003735 ... N/A 25601755
    216235 4d67:l (9.0) BS01 rna N/A GO:0003735 ... N/A 25601755
    216236 4d67:l (9.0) BS02 rna N/A GO:0003735 ... N/A 25601755
    216237 4d67:m (9.0) BS01 rna N/A GO:0003735 ... N/A 25601755
    216238 4d67:o (9.0) BS01 rna N/A GO:0003735 ... N/A 25601755
    216239 4d67:p (9.0) BS01 rna N/A GO:0003735 ... N/A 25601755
    216240 4d67:t (9.0) BS01 rna N/A GO:0003735 ... N/A 25601755
    216241 4d67:u (9.0) BS01 rna N/A GO:0003723 ... N/A 25601755
    216242 4d69:A (2.7) BS01 MN ? GO:0030246 ... P05046 25457745
    216243 4d69:A (2.7) BS02 MN ? GO:0030246 ... P05046 25457745
    216244 4d69:B (2.7) BS01 peptide ? GO:0030246 ... P05046 25457745
    216245 4d69:B (2.7) BS02 MN ? GO:0030246 ... P05046 25457745
    216246 4d69:B (2.7) BS03 MN ? GO:0030246 ... P05046 25457745
    216247 4d69:C (2.7) BS01 MN ? GO:0030246 ... P05046 25457745
    216248 4d69:C (2.7) BS02 MN ? GO:0030246 ... P05046 25457745
    216249 4d69:D (2.7) BS01 peptide ? GO:0030246 ... P05046 25457745
    216250 4d69:D (2.7) BS02 MN ? GO:0030246 ... P05046 25457745
    216251 4d69:D (2.7) BS03 MN ? GO:0030246 ... P05046 25457745
    216252 4d69:E (2.7) BS01 MN ? GO:0030246 ... P05046 25457745
    216253 4d69:E (2.7) BS02 MN ? GO:0030246 ... P05046 25457745
    216254 4d69:F (2.7) BS01 peptide ? GO:0030246 ... P05046 25457745
    216255 4d69:F (2.7) BS02 MN ? GO:0030246 ... P05046 25457745
    216256 4d69:F (2.7) BS03 MN ? GO:0030246 ... P05046 25457745
    216257 4d69:G (2.7) BS01 peptide ? GO:0030246 ... P05046 25457745
    216258 4d69:G (2.7) BS02 MN ? GO:0030246 ... P05046 25457745
    216259 4d69:G (2.7) BS03 MN ? GO:0030246 ... P05046 25457745
    216260 4d69:H (2.7) BS01 peptide ? GO:0030246 ... P05046 25457745
    216261 4d69:H (2.7) BS02 MN ? GO:0030246 ... P05046 25457745
    216262 4d69:H (2.7) BS03 MN ? GO:0030246 ... P05046 25457745
    216263 4d69:I (2.7) BS01 peptide ? GO:0030246 ... P05046 25457745
    216264 4d69:I (2.7) BS02 MN ? GO:0030246 ... P05046 25457745
    216265 4d69:I (2.7) BS03 MN ? GO:0030246 ... P05046 25457745
    216266 4d69:J (2.7) BS01 MN ? GO:0030246 ... P05046 25457745
    216267 4d69:J (2.7) BS02 MN ? GO:0030246 ... P05046 25457745
    216268 4d69:K (2.7) BS01 peptide ? GO:0030246 ... P05046 25457745
    216269 4d69:K (2.7) BS02 MN ? GO:0030246 ... P05046 25457745
    216270 4d69:K (2.7) BS03 MN ? GO:0030246 ... P05046 25457745
    216271 4d69:L (2.7) BS01 MN ? GO:0030246 ... P05046 25457745
    216272 4d69:L (2.7) BS02 MN ? GO:0030246 ... P05046 25457745
    216273 4d6d:A (1.52) BS01 GAL N/A GO:0005975 ... N/A 25870881
    216274 4d6d:A (1.52) BS02 FUC N/A GO:0005975 ... N/A 25870881
    216275 4d6e:A (1.45) BS01 GAL N/A GO:0005975 ... N/A 25870881
    216276 4d6e:A (1.45) BS02 FUC N/A GO:0005975 ... N/A 25870881
    216277 4d6f:A (2.03) BS01 GAL N/A GO:0005975 ... N/A 25870881
    216278 4d6f:A (2.03) BS02 FUC N/A GO:0005975 ... N/A 25870881
    216279 4d6g:A (1.24) BS01 GLA N/A GO:0005975 ... N/A 25870881
    216280 4d6g:A (1.24) BS02 FUC N/A GO:0005975 ... N/A 25870881
    216281 4d6h:A (1.65) BS01 GAL N/A GO:0005975 ... N/A 25870881
    216282 4d6h:A (1.65) BS02 FUC N/A GO:0005975 ... N/A 25870881
    216283 4d6i:A (1.99) BS01 GAL N/A GO:0005975 ... N/A 25870881
    216284 4d6i:A (1.99) BS02 FUC N/A GO:0005975 ... N/A 25870881
    216285 4d6j:A (1.98) BS01 GAL N/A GO:0005975 ... N/A 25870881
    216286 4d6j:A (1.98) BS02 FUC N/A GO:0005975 ... N/A 25870881
    216287 4d6n:A (2.35) BS01 dna 3.1.-.- GO:0004519 ... P21505 25486305
    216288 4d6n:A (2.35) BS02 dna 3.1.-.- GO:0004519 ... P21505 25486305
    216289 4d6n:A (2.35) BS03 dna 3.1.-.- GO:0004519 ... P21505 25486305
    216290 4d6n:A (2.35) BS04 dna 3.1.-.- GO:0004519 ... P21505 25486305
    216291 4d6n:A (2.35) BS05 dna 3.1.-.- GO:0004519 ... P21505 25486305
    216292 4d6n:A (2.35) BS06 MG 3.1.-.- GO:0004519 ... P21505 25486305
    216293 4d6n:A (2.35) BS07 MG 3.1.-.- GO:0004519 ... P21505 25486305
    216294 4d6n:F (2.35) BS01 dna 3.1.-.- GO:0004519 ... P21505 25486305
    216295 4d6n:F (2.35) BS02 dna 3.1.-.- GO:0004519 ... P21505 25486305
    216296 4d6n:F (2.35) BS03 dna 3.1.-.- GO:0004519 ... P21505 25486305
    216297 4d6n:F (2.35) BS04 dna 3.1.-.- GO:0004519 ... P21505 25486305
    216298 4d6n:F (2.35) BS05 dna 3.1.-.- GO:0004519 ... P21505 25486305
    216299 4d6n:F (2.35) BS06 MG 3.1.-.- GO:0004519 ... P21505 25486305
    216300 4d6n:F (2.35) BS07 MG 3.1.-.- GO:0004519 ... P21505 25486305
    216301 4d6n:K (2.35) BS01 dna 3.1.-.- GO:0004519 ... P21505 25486305
    216302 4d6n:K (2.35) BS02 dna 3.1.-.- GO:0004519 ... P21505 25486305
    216303 4d6n:K (2.35) BS03 dna 3.1.-.- GO:0004519 ... P21505 25486305
    216304 4d6n:K (2.35) BS04 dna 3.1.-.- GO:0004519 ... P21505 25486305
    216305 4d6n:K (2.35) BS05 dna 3.1.-.- GO:0004519 ... P21505 25486305
    216306 4d6n:K (2.35) BS06 MG 3.1.-.- GO:0004519 ... P21505 25486305
    216307 4d6n:K (2.35) BS07 MG 3.1.-.- GO:0004519 ... P21505 25486305
    216308 4d6o:A (2.2) BS01 dna 3.1.-.- GO:0004519 ... P21505 25486305
    216309 4d6o:A (2.2) BS02 dna 3.1.-.- GO:0004519 ... P21505 25486305
    216310 4d6o:A (2.2) BS03 dna 3.1.-.- GO:0004519 ... P21505 25486305
    216311 4d6o:A (2.2) BS04 MG 3.1.-.- GO:0004519 ... P21505 25486305
    216312 4d6o:A (2.2) BS05 MG 3.1.-.- GO:0004519 ... P21505 25486305
    216313 4d6o:D (2.2) BS01 dna 3.1.-.- GO:0004519 ... P21505 25486305
    216314 4d6o:D (2.2) BS02 dna 3.1.-.- GO:0004519 ... P21505 25486305
    216315 4d6o:D (2.2) BS03 dna 3.1.-.- GO:0004519 ... P21505 25486305
    216316 4d6o:D (2.2) BS04 MG 3.1.-.- GO:0004519 ... P21505 25486305
    216317 4d6o:D (2.2) BS05 MG 3.1.-.- GO:0004519 ... P21505 25486305
    216318 4d6o:G (2.2) BS01 dna 3.1.-.- GO:0004519 ... P21505 25486305
    216319 4d6o:G (2.2) BS02 dna 3.1.-.- GO:0004519 ... P21505 25486305
    216320 4d6o:G (2.2) BS03 dna 3.1.-.- GO:0004519 ... P21505 25486305
    216321 4d6o:G (2.2) BS04 MG 3.1.-.- GO:0004519 ... P21505 25486305
    216322 4d6o:G (2.2) BS05 MG 3.1.-.- GO:0004519 ... P21505 25486305
    216323 4d6p:A (1.482) BS01 ANP ? GO:0003677 ... O74036 27419043
    216324 4d6p:B (1.482) BS01 ANP ? GO:0003677 ... O74036 27419043
    216325 4d6q:A (1.292) BS01 ZN 1.14.11.66 N/A Q6B0I6 N/A
    216326 4d6q:A (1.292) BS02 PD2 1.14.11.66 N/A Q6B0I6 N/A BindingDB: IC50=2400nM
    216327 4d6r:A (1.398) BS01 ZN 1.14.11.66 N/A Q6B0I6 N/A
    216328 4d6r:A (1.398) BS02 IEJ 1.14.11.66 N/A Q6B0I6 N/A
    216329 4d6r:A (1.398) BS03 IEJ 1.14.11.66 N/A Q6B0I6 N/A
    216330 4d6s:A (1.4) BS01 ZN 1.14.11.66 N/A Q6B0I6 N/A
    216331 4d6s:A (1.4) BS02 DMD 1.14.11.66 N/A Q6B0I6 N/A
    216332 4d6t:B (3.57) BS01 peptide ? GO:0004222 ... P23004 25564664
    216333 4d6t:C (3.57) BS01 HEM ? GO:0005743 ... P00157 25564664
    216334 4d6t:C (3.57) BS02 HEM ? GO:0005743 ... P00157 25564664
    216335 4d6t:C (3.57) BS03 4X9 ? GO:0005743 ... P00157 25564664
    216336 4d6t:D (3.57) BS01 HEC 7.1.1.8 GO:0009055 ... P00125 25564664
    216337 4d6t:N (3.57) BS01 peptide ? GO:0005739 ... P31800 25564664
    216338 4d6t:O (3.57) BS01 peptide ? GO:0004222 ... P23004 25564664
    216339 4d6t:P (3.57) BS01 HEM ? GO:0005743 ... P00157 25564664
    216340 4d6t:P (3.57) BS02 HEM ? GO:0005743 ... P00157 25564664
    216341 4d6t:P (3.57) BS03 4X9 ? GO:0005743 ... P00157 25564664
    216342 4d6t:Q (3.57) BS01 HEC 7.1.1.8 GO:0009055 ... P00125 25564664
    216343 4d6t:R (3.57) BS01 FES 7.1.1.8 GO:0005739 ... P13272 25564664
    216344 4d6u:A (4.09) BS01 peptide ? GO:0005739 ... P31800 25564664
    216345 4d6u:B (4.09) BS01 peptide ? GO:0004222 ... P23004 25564664
    216346 4d6u:C (4.09) BS01 HEM ? GO:0005743 ... P00157 25564664
    216347 4d6u:C (4.09) BS02 HEM ? GO:0005743 ... P00157 25564664
    216348 4d6u:C (4.09) BS03 G8U ? GO:0005743 ... P00157 25564664
    216349 4d6u:D (4.09) BS01 HEC 7.1.1.8 GO:0005739 ... P00125 25564664
    216350 4d6u:N (4.09) BS01 peptide ? GO:0005739 ... P31800 25564664
    216351 4d6u:O (4.09) BS01 peptide ? GO:0004222 ... P23004 25564664
    216352 4d6u:P (4.09) BS01 HEM ? GO:0005743 ... P00157 25564664
    216353 4d6u:P (4.09) BS02 HEM ? GO:0005743 ... P00157 25564664
    216354 4d6u:P (4.09) BS03 G8U ? GO:0005743 ... P00157 25564664
    216355 4d6u:Q (4.09) BS01 HEC 7.1.1.8 GO:0005739 ... P00125 25564664
    216356 4d6u:R (4.09) BS01 FES 7.1.1.8 GO:0005739 ... P13272 25564664
    216357 4d6y:A (1.7) BS01 BEF ? GO:0000160 ... Q2YPW6 26113057
    216358 4d6y:A (1.7) BS02 MG ? GO:0000160 ... Q2YPW6 26113057
    216359 4d6y:B (1.7) BS01 BEF ? GO:0000160 ... Q2YPW6 26113057
    216360 4d6y:B (1.7) BS02 MG ? GO:0000160 ... Q2YPW6 26113057
    216361 4d6z:A (1.93) BS01 HEM 1.14.14.1
    1.14.14.55
    1.14.14.56
    1.14.14.73
    GO:0002933 ... P08684 26371436
    216362 4d6z:A (1.93) BS02 PK9 1.14.14.1
    1.14.14.55
    1.14.14.56
    1.14.14.73
    GO:0002933 ... P08684 26371436 BindingDB: Kd=105000nM, IC50=75000nM
    216363 4d71:A (1.77) BS01 GAL 3.2.1.102 GO:0003824 ... A0A0H2UKY3 25870881
    216364 4d71:A (1.77) BS02 FUC 3.2.1.102 GO:0003824 ... A0A0H2UKY3 25870881
    216365 4d72:A (2.11) BS01 GAL 3.2.1.102 GO:0003824 ... A0A0H2UKY4 25870881
    216366 4d72:A (2.11) BS02 FUC 3.2.1.102 GO:0003824 ... A0A0H2UKY4 25870881
    216367 4d75:A (2.25) BS01 PK9 1.14.14.1
    1.14.14.55
    1.14.14.56
    1.14.14.73
    GO:0002933 ... P08684 26371436 MOAD: Kd=105uM
    BindingDB: Kd=105000nM, IC50=75000nM
    216368 4d75:A (2.25) BS02 HEM 1.14.14.1
    1.14.14.55
    1.14.14.56
    1.14.14.73
    GO:0002933 ... P08684 26371436
    216369 4d76:A (1.77) BS01 J1J 3.4.21.27 GO:0004252 ... P03951 N/A
    216370 4d78:A (2.8) BS01 HEM 1.14.14.1
    1.14.14.55
    1.14.14.56
    1.14.14.73
    GO:0002933 ... P08684 26371436
    216371 4d78:A (2.8) BS02 J9K 1.14.14.1
    1.14.14.55
    1.14.14.56
    1.14.14.73
    GO:0002933 ... P08684 26371436 BindingDB: Kd=900nM, IC50=520nM
    216372 4d79:A (1.768) BS01 ATP 6.1.-.- GO:0005515 ... Q46927 25897750
    216373 4d79:B (1.768) BS01 ATP 6.1.-.- GO:0005515 ... Q46927 25897750
    216374 4d79:B (1.768) BS02 ATP 6.1.-.- GO:0005515 ... Q46927 25897750
    216375 4d79:C (1.768) BS01 ATP 6.1.-.- GO:0005515 ... Q46927 25897750
    216376 4d79:D (1.768) BS01 ATP 6.1.-.- GO:0005515 ... Q46927 25897750
    216377 4d7a:A (1.801) BS01 AMP 6.1.-.- GO:0005515 ... Q46927 25897750
    216378 4d7a:B (1.801) BS01 AMP 6.1.-.- GO:0005515 ... Q46927 25897750
    216379 4d7a:D (1.801) BS01 AMP 6.1.-.- GO:0005515 ... Q46927 25897750
    216380 4d7b:A (1.15) BS01 TCW ? GO:0001523 ... P02766 26902880 MOAD: Kd=21nM
    BindingDB: Kd=56nM
    216381 4d7b:B (1.15) BS01 TCW ? GO:0001523 ... P02766 26902880 MOAD: Kd=21nM
    BindingDB: Kd=56nM
    216382 4d7d:A (2.76) BS01 HEM 1.14.14.1
    1.14.14.55
    1.14.14.56
    1.14.14.73
    GO:0002933 ... P08684 26371436
    216383 4d7d:A (2.76) BS02 PKT 1.14.14.1
    1.14.14.55
    1.14.14.56
    1.14.14.73
    GO:0002933 ... P08684 26371436 BindingDB: IC50=210nM, Kd=500nM
    216384 4d7e:A (2.4) BS01 FAD 1.14.13.59 GO:0047091 ... Q5Z1T5 25802330
    216385 4d7e:B (2.4) BS01 FAD 1.14.13.59 GO:0047091 ... Q5Z1T5 25802330
    216386 4d7e:C (2.4) BS01 FAD 1.14.13.59 GO:0047091 ... Q5Z1T5 25802330
    216387 4d7e:D (2.4) BS01 FAD 1.14.13.59 GO:0047091 ... Q5Z1T5 25802330
    216388 4d7f:A (1.62) BS01 IXA 3.4.21.27 GO:0004252 ... P03951 N/A
    216389 4d7g:A (2.33) BS01 E6U 3.4.21.27 GO:0004252 ... P03951 N/A
    216390 4d7h:A (2.02) BS01 HEM 1.14.14.47 GO:0004517 ... O34453 26091171
    216391 4d7h:A (2.02) BS02 H4B 1.14.14.47 GO:0004517 ... O34453 26091171
    216392 4d7h:A (2.02) BS03 M46 1.14.14.47 GO:0004517 ... O34453 26091171
    216393 4d7h:A (2.02) BS04 POL 1.14.14.47 GO:0004517 ... O34453 26091171
    216394 4d7i:A (1.96) BS01 HEM 1.14.14.47 GO:0004517 ... O34453 26091171
    216395 4d7i:A (1.96) BS02 H4B 1.14.14.47 GO:0004517 ... O34453 26091171
    216396 4d7i:A (1.96) BS03 0GD 1.14.14.47 GO:0004517 ... O34453 26091171
    216397 4d7j:A (1.55) BS01 HEM 1.14.14.47 GO:0004517 ... O34453 26091171
    216398 4d7j:A (1.55) BS02 H4B 1.14.14.47 GO:0004517 ... O34453 26091171
    216399 4d7j:A (1.55) BS03 0GD 1.14.14.47 GO:0004517 ... O34453 26091171
    216400 4d7j:A (1.55) BS04 POL 1.14.14.47 GO:0004517 ... O34453 26091171

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).