SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    218401 4duw:B (2.2) BS03 MG 3.2.1.23 GO:0000287 ... P00722 23486479
    218402 4duw:B (2.2) BS04 MG 3.2.1.23 GO:0000287 ... P00722 23486479
    218403 4duw:C (2.2) BS01 BGC 3.2.1.23 GO:0000287 ... P00722 23486479
    218404 4duw:C (2.2) BS02 GAL 3.2.1.23 GO:0000287 ... P00722 23486479
    218405 4duw:C (2.2) BS03 MG 3.2.1.23 GO:0000287 ... P00722 23486479
    218406 4duw:C (2.2) BS04 MG 3.2.1.23 GO:0000287 ... P00722 23486479
    218407 4duw:D (2.2) BS01 BGC 3.2.1.23 GO:0000287 ... P00722 23486479
    218408 4duw:D (2.2) BS02 GAL 3.2.1.23 GO:0000287 ... P00722 23486479
    218409 4duw:D (2.2) BS03 MG 3.2.1.23 GO:0000287 ... P00722 23486479
    218410 4duw:D (2.2) BS04 MG 3.2.1.23 GO:0000287 ... P00722 23486479
    218411 4dux:A (2.3) BS01 0MK 3.2.1.23 GO:0000287 ... P00722 23486479
    218412 4dux:A (2.3) BS02 0MK 3.2.1.23 GO:0000287 ... P00722 23486479
    218413 4dux:A (2.3) BS03 MG 3.2.1.23 GO:0000287 ... P00722 23486479
    218414 4dux:A (2.3) BS04 MG 3.2.1.23 GO:0000287 ... P00722 23486479
    218415 4dux:B (2.3) BS01 0MK 3.2.1.23 GO:0000287 ... P00722 23486479
    218416 4dux:B (2.3) BS02 0MK 3.2.1.23 GO:0000287 ... P00722 23486479
    218417 4dux:B (2.3) BS03 MG 3.2.1.23 GO:0000287 ... P00722 23486479
    218418 4dux:B (2.3) BS04 MG 3.2.1.23 GO:0000287 ... P00722 23486479
    218419 4dux:C (2.3) BS01 0MK 3.2.1.23 GO:0000287 ... P00722 23486479
    218420 4dux:C (2.3) BS02 0MK 3.2.1.23 GO:0000287 ... P00722 23486479
    218421 4dux:C (2.3) BS03 MG 3.2.1.23 GO:0000287 ... P00722 23486479
    218422 4dux:C (2.3) BS04 MG 3.2.1.23 GO:0000287 ... P00722 23486479
    218423 4dux:D (2.3) BS01 0MK 3.2.1.23 GO:0000287 ... P00722 23486479
    218424 4dux:D (2.3) BS02 0MK 3.2.1.23 GO:0000287 ... P00722 23486479
    218425 4dux:D (2.3) BS03 MG 3.2.1.23 GO:0000287 ... P00722 23486479
    218426 4dux:D (2.3) BS04 MG 3.2.1.23 GO:0000287 ... P00722 23486479
    218427 4duy:B (3.386) BS01 rna ? GO:0003735 ... P80371 N/A
    218428 4duy:B (3.386) BS02 MG ? GO:0003735 ... P80371 N/A
    218429 4duy:B (3.386) BS03 MG ? GO:0003735 ... P80371 N/A
    218430 4duy:C (3.386) BS01 rna ? GO:0003676 ... P80372 N/A
    218431 4duy:C (3.386) BS02 MG ? GO:0003676 ... P80372 N/A
    218432 4duy:D (3.386) BS01 rna ? GO:0003723 ... P80373 N/A
    218433 4duy:D (3.386) BS02 MG ? GO:0003723 ... P80373 N/A
    218434 4duy:D (3.386) BS03 MG ? GO:0003723 ... P80373 N/A
    218435 4duy:E (3.386) BS01 rna ? GO:0003723 ... Q5SHQ5 N/A
    218436 4duy:F (3.386) BS01 rna ? GO:0003735 ... Q5SLP8 N/A
    218437 4duy:G (3.386) BS01 rna ? GO:0000049 ... P17291 N/A
    218438 4duy:G (3.386) BS02 MG ? GO:0000049 ... P17291 N/A
    218439 4duy:H (3.386) BS01 rna ? GO:0003735 ... P0DOY9 N/A
    218440 4duy:I (3.386) BS01 rna ? GO:0003723 ... P80374 N/A
    218441 4duy:J (3.386) BS01 rna ? GO:0000049 ... Q5SHN7 N/A
    218442 4duy:J (3.386) BS02 MG ? GO:0000049 ... Q5SHN7 N/A
    218443 4duy:K (3.386) BS01 rna ? GO:0003735 ... P80376 N/A
    218444 4duy:K (3.386) BS02 MG ? GO:0003735 ... P80376 N/A
    218445 4duy:L (3.386) BS01 rna ? GO:0000049 ... Q5SHN3 N/A
    218446 4duy:L (3.386) BS02 MG ? GO:0000049 ... Q5SHN3 N/A
    218447 4duy:M (3.386) BS01 rna ? GO:0000049 ... P80377 N/A
    218448 4duy:N (3.386) BS01 rna ? GO:0003735 ... P0DOY6 N/A
    218449 4duy:N (3.386) BS02 ZN ? GO:0003735 ... P0DOY6 N/A
    218450 4duy:O (3.386) BS01 rna ? GO:0003735 ... Q5SJ76 N/A
    218451 4duy:P (3.386) BS01 rna ? GO:0003735 ... Q5SJH3 N/A
    218452 4duy:Q (3.386) BS01 rna ? GO:0003735 ... P0DOY7 N/A
    218453 4duy:Q (3.386) BS02 MG ? GO:0003735 ... P0DOY7 N/A
    218454 4duy:R (3.386) BS01 rna ? GO:0003735 ... Q5SLQ0 N/A
    218455 4duy:S (3.386) BS01 rna ? GO:0000028 ... Q5SHP2 N/A
    218456 4duy:T (3.386) BS01 rna ? GO:0003723 ... P80380 N/A
    218457 4duz:B (3.651) BS01 rna ? GO:0003735 ... P80371 N/A
    218458 4duz:C (3.651) BS01 rna ? GO:0003676 ... P80372 N/A
    218459 4duz:D (3.651) BS01 rna ? GO:0003723 ... P80373 N/A
    218460 4duz:D (3.651) BS02 MG ? GO:0003723 ... P80373 N/A
    218461 4duz:E (3.651) BS01 rna ? GO:0003723 ... Q5SHQ5 N/A
    218462 4duz:F (3.651) BS01 rna ? GO:0003735 ... Q5SLP8 N/A
    218463 4duz:G (3.651) BS01 rna ? GO:0000049 ... P17291 N/A
    218464 4duz:H (3.651) BS01 rna ? GO:0003735 ... P0DOY9 N/A
    218465 4duz:I (3.651) BS01 rna ? GO:0003723 ... P80374 N/A
    218466 4duz:J (3.651) BS01 rna ? GO:0000049 ... Q5SHN7 N/A
    218467 4duz:K (3.651) BS01 rna ? GO:0003735 ... P80376 N/A
    218468 4duz:L (3.651) BS01 rna ? GO:0000049 ... Q5SHN3 N/A
    218469 4duz:L (3.651) BS02 SRY ? GO:0000049 ... Q5SHN3 N/A
    218470 4duz:L (3.651) BS03 MG ? GO:0000049 ... Q5SHN3 N/A
    218471 4duz:M (3.651) BS01 rna ? GO:0000049 ... P80377 N/A
    218472 4duz:N (3.651) BS01 rna ? GO:0003735 ... P0DOY6 N/A
    218473 4duz:N (3.651) BS02 ZN ? GO:0003735 ... P0DOY6 N/A
    218474 4duz:O (3.651) BS01 rna ? GO:0003735 ... Q5SJ76 N/A
    218475 4duz:P (3.651) BS01 rna ? GO:0003735 ... Q5SJH3 N/A
    218476 4duz:Q (3.651) BS01 rna ? GO:0003735 ... P0DOY7 N/A
    218477 4duz:R (3.651) BS01 rna ? GO:0003735 ... Q5SLQ0 N/A
    218478 4duz:S (3.651) BS01 rna ? GO:0000028 ... Q5SHP2 N/A
    218479 4duz:T (3.651) BS01 rna ? GO:0003723 ... P80380 N/A
    218480 4duz:T (3.651) BS02 MG ? GO:0003723 ... P80380 N/A
    218481 4dv0:B (3.853) BS01 rna ? GO:0003735 ... P80371 N/A
    218482 4dv0:B (3.853) BS02 MG ? GO:0003735 ... P80371 N/A
    218483 4dv0:B (3.853) BS03 MG ? GO:0003735 ... P80371 N/A
    218484 4dv0:C (3.853) BS01 rna ? GO:0003676 ... P80372 N/A
    218485 4dv0:D (3.853) BS01 rna ? GO:0003723 ... P80373 N/A
    218486 4dv0:D (3.853) BS02 MG ? GO:0003723 ... P80373 N/A
    218487 4dv0:E (3.853) BS01 rna ? GO:0003723 ... Q5SHQ5 N/A
    218488 4dv0:F (3.853) BS01 rna ? GO:0003735 ... Q5SLP8 N/A
    218489 4dv0:G (3.853) BS01 rna ? GO:0000049 ... P17291 N/A
    218490 4dv0:H (3.853) BS01 rna ? GO:0003735 ... P0DOY9 N/A
    218491 4dv0:I (3.853) BS01 rna ? GO:0003723 ... P80374 N/A
    218492 4dv0:J (3.853) BS01 rna ? GO:0000049 ... Q5SHN7 N/A
    218493 4dv0:K (3.853) BS01 rna ? GO:0003735 ... P80376 N/A
    218494 4dv0:L (3.853) BS01 rna ? GO:0000049 ... Q5SHN3 N/A
    218495 4dv0:L (3.853) BS02 MG ? GO:0000049 ... Q5SHN3 N/A
    218496 4dv0:M (3.853) BS01 rna ? GO:0000049 ... P80377 N/A
    218497 4dv0:N (3.853) BS01 rna ? GO:0003735 ... P0DOY6 N/A
    218498 4dv0:N (3.853) BS02 ZN ? GO:0003735 ... P0DOY6 N/A
    218499 4dv0:O (3.853) BS01 rna ? GO:0003735 ... Q5SJ76 N/A
    218500 4dv0:P (3.853) BS01 rna ? GO:0003735 ... Q5SJH3 N/A
    218501 4dv0:Q (3.853) BS01 rna ? GO:0003735 ... P0DOY7 N/A
    218502 4dv0:R (3.853) BS01 rna ? GO:0003735 ... Q5SLQ0 N/A
    218503 4dv0:S (3.853) BS01 rna ? GO:0000028 ... Q5SHP2 N/A
    218504 4dv0:S (3.853) BS02 MG ? GO:0000028 ... Q5SHP2 N/A
    218505 4dv0:T (3.853) BS01 rna ? GO:0003723 ... P80380 N/A
    218506 4dv1:B (3.849) BS01 rna ? GO:0003735 ... P80371 N/A
    218507 4dv1:C (3.849) BS01 rna ? GO:0003676 ... P80372 N/A
    218508 4dv1:D (3.849) BS01 rna ? GO:0003723 ... P80373 N/A
    218509 4dv1:E (3.849) BS01 rna ? GO:0003723 ... Q5SHQ5 N/A
    218510 4dv1:F (3.849) BS01 rna ? GO:0003735 ... Q5SLP8 N/A
    218511 4dv1:G (3.849) BS01 rna ? GO:0000049 ... P17291 N/A
    218512 4dv1:H (3.849) BS01 rna ? GO:0003735 ... P0DOY9 N/A
    218513 4dv1:I (3.849) BS01 rna ? GO:0003723 ... P80374 N/A
    218514 4dv1:J (3.849) BS01 rna ? GO:0000049 ... Q5SHN7 N/A
    218515 4dv1:J (3.849) BS02 MG ? GO:0000049 ... Q5SHN7 N/A
    218516 4dv1:K (3.849) BS01 rna ? GO:0003735 ... P80376 N/A
    218517 4dv1:K (3.849) BS02 MG ? GO:0003735 ... P80376 N/A
    218518 4dv1:K (3.849) BS03 MG ? GO:0003735 ... P80376 N/A
    218519 4dv1:L (3.849) BS01 rna ? GO:0000049 ... Q5SHN3 N/A
    218520 4dv1:L (3.849) BS02 SRY ? GO:0000049 ... Q5SHN3 N/A
    218521 4dv1:L (3.849) BS03 MG ? GO:0000049 ... Q5SHN3 N/A
    218522 4dv1:M (3.849) BS01 rna ? GO:0000049 ... P80377 N/A
    218523 4dv1:N (3.849) BS01 rna ? GO:0003735 ... P0DOY6 N/A
    218524 4dv1:N (3.849) BS02 ZN ? GO:0003735 ... P0DOY6 N/A
    218525 4dv1:N (3.849) BS03 MG ? GO:0003735 ... P0DOY6 N/A
    218526 4dv1:O (3.849) BS01 rna ? GO:0003735 ... Q5SJ76 N/A
    218527 4dv1:P (3.849) BS01 rna ? GO:0003735 ... Q5SJH3 N/A
    218528 4dv1:Q (3.849) BS01 rna ? GO:0003735 ... P0DOY7 N/A
    218529 4dv1:R (3.849) BS01 rna ? GO:0003735 ... Q5SLQ0 N/A
    218530 4dv1:S (3.849) BS01 rna ? GO:0000028 ... Q5SHP2 N/A
    218531 4dv1:S (3.849) BS02 MG ? GO:0000028 ... Q5SHP2 N/A
    218532 4dv1:T (3.849) BS01 rna ? GO:0003723 ... P80380 N/A
    218533 4dv1:T (3.849) BS02 MG ? GO:0003723 ... P80380 N/A
    218534 4dv2:B (3.646) BS01 rna ? GO:0003735 ... P80371 N/A
    218535 4dv2:B (3.646) BS02 MG ? GO:0003735 ... P80371 N/A
    218536 4dv2:C (3.646) BS01 rna ? GO:0003676 ... P80372 N/A
    218537 4dv2:C (3.646) BS02 MG ? GO:0003676 ... P80372 N/A
    218538 4dv2:C (3.646) BS03 MG ? GO:0003676 ... P80372 N/A
    218539 4dv2:D (3.646) BS01 rna ? GO:0003723 ... P80373 N/A
    218540 4dv2:D (3.646) BS02 MG ? GO:0003723 ... P80373 N/A
    218541 4dv2:E (3.646) BS01 rna ? GO:0003723 ... Q5SHQ5 N/A
    218542 4dv2:F (3.646) BS01 rna ? GO:0003735 ... Q5SLP8 N/A
    218543 4dv2:G (3.646) BS01 rna ? GO:0000049 ... P17291 N/A
    218544 4dv2:H (3.646) BS01 rna ? GO:0003735 ... P0DOY9 N/A
    218545 4dv2:I (3.646) BS01 rna ? GO:0003723 ... P80374 N/A
    218546 4dv2:J (3.646) BS01 rna ? GO:0000049 ... Q5SHN7 N/A
    218547 4dv2:K (3.646) BS01 rna ? GO:0003735 ... P80376 N/A
    218548 4dv2:K (3.646) BS02 MG ? GO:0003735 ... P80376 N/A
    218549 4dv2:L (3.646) BS01 rna ? GO:0000049 ... Q5SHN3 N/A
    218550 4dv2:L (3.646) BS02 MG ? GO:0000049 ... Q5SHN3 N/A
    218551 4dv2:M (3.646) BS01 rna ? GO:0000049 ... P80377 N/A
    218552 4dv2:N (3.646) BS01 rna ? GO:0003735 ... P0DOY6 N/A
    218553 4dv2:N (3.646) BS02 ZN ? GO:0003735 ... P0DOY6 N/A
    218554 4dv2:O (3.646) BS01 rna ? GO:0003735 ... Q5SJ76 N/A
    218555 4dv2:P (3.646) BS01 rna ? GO:0003735 ... Q5SJH3 N/A
    218556 4dv2:Q (3.646) BS01 rna ? GO:0003735 ... P0DOY7 N/A
    218557 4dv2:Q (3.646) BS02 MG ? GO:0003735 ... P0DOY7 N/A
    218558 4dv2:R (3.646) BS01 rna ? GO:0003735 ... Q5SLQ0 N/A
    218559 4dv2:S (3.646) BS01 rna ? GO:0000028 ... Q5SHP2 N/A
    218560 4dv2:T (3.646) BS01 rna ? GO:0003723 ... P80380 N/A
    218561 4dv2:T (3.646) BS02 MG ? GO:0003723 ... P80380 N/A
    218562 4dv3:B (3.547) BS01 rna ? GO:0003735 ... P80371 N/A
    218563 4dv3:C (3.547) BS01 rna ? GO:0003676 ... P80372 N/A
    218564 4dv3:D (3.547) BS01 rna ? GO:0003723 ... P80373 N/A
    218565 4dv3:E (3.547) BS01 rna ? GO:0003723 ... Q5SHQ5 N/A
    218566 4dv3:F (3.547) BS01 rna ? GO:0003735 ... Q5SLP8 N/A
    218567 4dv3:G (3.547) BS01 rna ? GO:0000049 ... P17291 N/A
    218568 4dv3:H (3.547) BS01 rna ? GO:0003735 ... P0DOY9 N/A
    218569 4dv3:I (3.547) BS01 rna ? GO:0003723 ... P80374 N/A
    218570 4dv3:J (3.547) BS01 rna ? GO:0000049 ... Q5SHN7 N/A
    218571 4dv3:J (3.547) BS02 MG ? GO:0000049 ... Q5SHN7 N/A
    218572 4dv3:K (3.547) BS01 rna ? GO:0003735 ... P80376 N/A
    218573 4dv3:K (3.547) BS02 MG ? GO:0003735 ... P80376 N/A
    218574 4dv3:L (3.547) BS01 rna ? GO:0000049 ... Q5SHN3 N/A
    218575 4dv3:L (3.547) BS02 SRY ? GO:0000049 ... Q5SHN3 N/A
    218576 4dv3:M (3.547) BS01 rna ? GO:0000049 ... P80377 N/A
    218577 4dv3:N (3.547) BS01 rna ? GO:0003735 ... P0DOY6 N/A
    218578 4dv3:N (3.547) BS02 ZN ? GO:0003735 ... P0DOY6 N/A
    218579 4dv3:O (3.547) BS01 rna ? GO:0003735 ... Q5SJ76 N/A
    218580 4dv3:P (3.547) BS01 rna ? GO:0003735 ... Q5SJH3 N/A
    218581 4dv3:Q (3.547) BS01 rna ? GO:0003735 ... P0DOY7 N/A
    218582 4dv3:Q (3.547) BS02 MG ? GO:0003735 ... P0DOY7 N/A
    218583 4dv3:R (3.547) BS01 rna ? GO:0003735 ... Q5SLQ0 N/A
    218584 4dv3:S (3.547) BS01 rna ? GO:0000028 ... Q5SHP2 N/A
    218585 4dv3:S (3.547) BS02 MG ? GO:0000028 ... Q5SHP2 N/A
    218586 4dv3:T (3.547) BS01 rna ? GO:0003723 ... P80380 N/A
    218587 4dv3:T (3.547) BS02 MG ? GO:0003723 ... P80380 N/A
    218588 4dv4:B (3.651) BS01 rna ? GO:0003735 ... P80371 N/A
    218589 4dv4:B (3.651) BS02 MG ? GO:0003735 ... P80371 N/A
    218590 4dv4:C (3.651) BS01 rna ? GO:0003676 ... P80372 N/A
    218591 4dv4:C (3.651) BS02 MG ? GO:0003676 ... P80372 N/A
    218592 4dv4:D (3.651) BS01 rna ? GO:0003723 ... P80373 N/A
    218593 4dv4:D (3.651) BS02 ZN ? GO:0003723 ... P80373 N/A
    218594 4dv4:D (3.651) BS03 MG ? GO:0003723 ... P80373 N/A
    218595 4dv4:D (3.651) BS04 MG ? GO:0003723 ... P80373 N/A
    218596 4dv4:E (3.651) BS01 rna ? GO:0003723 ... Q5SHQ5 N/A
    218597 4dv4:F (3.651) BS01 rna ? GO:0003735 ... Q5SLP8 N/A
    218598 4dv4:G (3.651) BS01 rna ? GO:0000049 ... P17291 N/A
    218599 4dv4:H (3.651) BS01 rna ? GO:0003735 ... P0DOY9 N/A
    218600 4dv4:I (3.651) BS01 rna ? GO:0003723 ... P80374 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).