SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    218801 4dwq:A (2.25) BS02 MN 3.1.-.-
    6.5.1.8
    GO:0006396 ... O59245 22949672
    218802 4dwq:A (2.25) BS03 PO4 3.1.-.-
    6.5.1.8
    GO:0006396 ... O59245 22949672
    218803 4dwq:A (2.25) BS04 POP 3.1.-.-
    6.5.1.8
    GO:0006396 ... O59245 22949672
    218804 4dwq:B (2.25) BS01 5GP 3.1.-.-
    6.5.1.8
    GO:0006396 ... O59245 22949672
    218805 4dwq:B (2.25) BS02 MN 3.1.-.-
    6.5.1.8
    GO:0006396 ... O59245 22949672
    218806 4dwq:B (2.25) BS03 PO4 3.1.-.-
    6.5.1.8
    GO:0006396 ... O59245 22949672
    218807 4dwq:B (2.25) BS04 PO4 3.1.-.-
    6.5.1.8
    GO:0006396 ... O59245 22949672
    218808 4dwr:A (1.48) BS01 GLC 3.1.-.-
    6.5.1.8
    GO:0006396 ... O59245 22949672
    218809 4dwr:A (1.48) BS02 FRU 3.1.-.-
    6.5.1.8
    GO:0006396 ... O59245 22949672
    218810 4dwr:A (1.48) BS03 MN 3.1.-.-
    6.5.1.8
    GO:0006396 ... O59245 22949672
    218811 4dwr:A (1.48) BS04 MN 3.1.-.-
    6.5.1.8
    GO:0006396 ... O59245 22949672
    218812 4dwr:B (1.48) BS01 GLC 3.1.-.-
    6.5.1.8
    GO:0006396 ... O59245 22949672
    218813 4dwr:B (1.48) BS02 FRU 3.1.-.-
    6.5.1.8
    GO:0006396 ... O59245 22949672
    218814 4dwr:B (1.48) BS03 MN 3.1.-.-
    6.5.1.8
    GO:0006396 ... O59245 22949672
    218815 4dwr:B (1.48) BS04 MN 3.1.-.-
    6.5.1.8
    GO:0006396 ... O59245 22949672
    218816 4dwr:C (1.48) BS01 GLC 3.1.-.-
    6.5.1.8
    GO:0006396 ... O59245 22949672
    218817 4dwr:C (1.48) BS02 FRU 3.1.-.-
    6.5.1.8
    GO:0006396 ... O59245 22949672
    218818 4dwr:C (1.48) BS03 MN 3.1.-.-
    6.5.1.8
    GO:0006396 ... O59245 22949672
    218819 4dwr:C (1.48) BS04 MN 3.1.-.-
    6.5.1.8
    GO:0006396 ... O59245 22949672
    218820 4dwt:A (2.05) BS01 HEM 1.11.-.- GO:0019825 ... Q9NAV8 N/A
    218821 4dwt:B (2.05) BS01 HEM 1.11.-.- GO:0019825 ... Q9NAV8 N/A
    218822 4dwu:A (1.44) BS01 HEM 1.11.-.- GO:0019825 ... Q9NAV8 N/A
    218823 4dwu:B (1.44) BS01 HEM 1.11.-.- GO:0019825 ... Q9NAV8 N/A
    218824 4dwv:A (1.14) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 22531044
    218825 4dwv:A (1.14) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 22531044
    218826 4dwv:A (1.14) BS03 NAJ 1.1.1.1 GO:0004022 ... P00327 22531044
    218827 4dwv:A (1.14) BS04 PFB 1.1.1.1 GO:0004022 ... P00327 22531044 MOAD: Ki=0.52uM
    218828 4dwv:B (1.14) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 22531044
    218829 4dwv:B (1.14) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 22531044
    218830 4dwv:B (1.14) BS03 NAJ 1.1.1.1 GO:0004022 ... P00327 22531044
    218831 4dwv:B (1.14) BS04 PFB 1.1.1.1 GO:0004022 ... P00327 22531044 MOAD: Ki=0.52uM
    218832 4dww:A (1.74) BS01 CA 3.4.21.62 GO:0004252 ... P35835 21139221
    218833 4dww:A (1.74) BS02 CA 3.4.21.62 GO:0004252 ... P35835 21139221
    218834 4dwx:A (1.8) BS01 ZN 3.2.1.14 GO:0004568 ... Q9FRV0 22831795
    218835 4dwx:A (1.8) BS02 ZN 3.2.1.14 GO:0004568 ... Q9FRV0 22831795
    218836 4dwx:B (1.8) BS01 ZN 3.2.1.14 GO:0004568 ... Q9FRV0 22831795
    218837 4dwz:A (2.7) BS01 ZN ? GO:0006536 ... B6YTD8 22948927
    218838 4dwz:A (2.7) BS02 ZN ? GO:0006536 ... B6YTD8 22948927
    218839 4dwz:A (2.7) BS03 ZN ? GO:0006536 ... B6YTD8 22948927
    218840 4dwz:A (2.7) BS04 ZN ? GO:0006536 ... B6YTD8 22948927
    218841 4dwz:A (2.7) BS05 ZN ? GO:0006536 ... B6YTD8 22948927
    218842 4dwz:B (2.7) BS01 ZN ? GO:0006536 ... B6YTD8 22948927
    218843 4dwz:B (2.7) BS02 ZN ? GO:0006536 ... B6YTD8 22948927
    218844 4dwz:B (2.7) BS03 ZN ? GO:0006536 ... B6YTD8 22948927
    218845 4dwz:B (2.7) BS04 ZN ? GO:0006536 ... B6YTD8 22948927
    218846 4dwz:B (2.7) BS05 ZN ? GO:0006536 ... B6YTD8 22948927
    218847 4dwz:B (2.7) BS06 ZN ? GO:0006536 ... B6YTD8 22948927
    218848 4dwz:C (2.7) BS01 ZN ? GO:0006536 ... B6YTD8 22948927
    218849 4dwz:C (2.7) BS02 ZN ? GO:0006536 ... B6YTD8 22948927
    218850 4dwz:C (2.7) BS03 ZN ? GO:0006536 ... B6YTD8 22948927
    218851 4dwz:C (2.7) BS04 ZN ? GO:0006536 ... B6YTD8 22948927
    218852 4dwz:D (2.7) BS01 ZN ? GO:0006536 ... B6YTD8 22948927
    218853 4dwz:D (2.7) BS02 ZN ? GO:0006536 ... B6YTD8 22948927
    218854 4dwz:D (2.7) BS03 ZN ? GO:0006536 ... B6YTD8 22948927
    218855 4dwz:D (2.7) BS04 ZN ? GO:0006536 ... B6YTD8 22948927
    218856 4dwz:D (2.7) BS05 ZN ? GO:0006536 ... B6YTD8 22948927
    218857 4dwz:E (2.7) BS01 ZN ? GO:0006536 ... B6YTD8 22948927
    218858 4dwz:E (2.7) BS02 ZN ? GO:0006536 ... B6YTD8 22948927
    218859 4dwz:E (2.7) BS03 ZN ? GO:0006536 ... B6YTD8 22948927
    218860 4dwz:E (2.7) BS04 ZN ? GO:0006536 ... B6YTD8 22948927
    218861 4dwz:E (2.7) BS05 ZN ? GO:0006536 ... B6YTD8 22948927
    218862 4dwz:E (2.7) BS06 ZN ? GO:0006536 ... B6YTD8 22948927
    218863 4dwz:F (2.7) BS01 ZN ? GO:0006536 ... B6YTD8 22948927
    218864 4dwz:F (2.7) BS02 ZN ? GO:0006536 ... B6YTD8 22948927
    218865 4dwz:F (2.7) BS03 ZN ? GO:0006536 ... B6YTD8 22948927
    218866 4dwz:F (2.7) BS04 ZN ? GO:0006536 ... B6YTD8 22948927
    218867 4dwz:F (2.7) BS05 ZN ? GO:0006536 ... B6YTD8 22948927
    218868 4dx0:A (3.4) BS01 0MT ? N/A O49997 22467351
    218869 4dx2:A (2.95) BS01 BGC ? GO:0005216 ... Q9HBA0 22702953
    218870 4dx2:A (2.95) BS02 ATP ? GO:0005216 ... Q9HBA0 22702953
    218871 4dx5:B (1.9) BS01 MIY ? GO:0005515 ... P31224 22451937
    218872 4dx7:A (2.253) BS01 DM2 ? GO:0005515 ... P31224 22451937
    218873 4dx7:A (2.253) BS02 DM2 ? GO:0005515 ... P31224 22451937
    218874 4dx7:B (2.253) BS01 DM2 ? GO:0005515 ... P31224 22451937
    218875 4dx9:0 (2.99) BS01 peptide ? N/A O14713 23317506
    218876 4dx9:1 (2.99) BS01 peptide ? N/A O14713 23317506
    218877 4dx9:2 (2.99) BS01 peptide ? N/A O14713 23317506
    218878 4dx9:3 (2.99) BS01 peptide ? N/A O14713 23317506
    218879 4dx9:4 (2.99) BS01 peptide ? N/A O14713 23317506
    218880 4dx9:5 (2.99) BS01 peptide ? N/A O14713 23317506
    218881 4dx9:A (2.99) BS01 peptide ? N/A O14713 23317506
    218882 4dx9:C (2.99) BS01 peptide ? N/A O14713 23317506
    218883 4dx9:E (2.99) BS01 peptide ? N/A O14713 23317506
    218884 4dx9:G (2.99) BS01 peptide ? N/A O14713 23317506
    218885 4dx9:I (2.99) BS01 peptide ? N/A O14713 23317506
    218886 4dx9:K (2.99) BS01 peptide ? N/A O14713 23317506
    218887 4dx9:M (2.99) BS01 peptide ? N/A O14713 23317506
    218888 4dx9:O (2.99) BS01 peptide ? N/A O14713 23317506
    218889 4dx9:Q (2.99) BS01 peptide ? N/A O14713 23317506
    218890 4dx9:S (2.99) BS01 peptide ? N/A O14713 23317506
    218891 4dx9:U (2.99) BS01 peptide ? N/A O14713 23317506
    218892 4dx9:W (2.99) BS01 peptide ? N/A O14713 23317506
    218893 4dx9:Y (2.99) BS01 peptide ? N/A O14713 23317506
    218894 4dx9:a (2.99) BS01 peptide ? N/A O14713 23317506
    218895 4dx9:c (2.99) BS01 peptide ? N/A O14713 23317506
    218896 4dx9:e (2.99) BS01 peptide ? N/A O14713 23317506
    218897 4dx9:g (2.99) BS01 peptide ? N/A O14713 23317506
    218898 4dx9:i (2.99) BS01 peptide ? N/A O14713 23317506
    218899 4dx9:k (2.99) BS01 peptide ? N/A O14713 23317506
    218900 4dx9:m (2.99) BS01 peptide ? N/A O14713 23317506
    218901 4dx9:o (2.99) BS01 peptide ? N/A O14713 23317506
    218902 4dx9:s (2.99) BS01 peptide ? N/A O14713 23317506
    218903 4dx9:u (2.99) BS01 peptide ? N/A O14713 23317506
    218904 4dx9:y (2.99) BS01 peptide ? N/A O14713 23317506
    218905 4dxa:A (1.95) BS01 GSP 3.6.5.2 GO:0003924 ... P61224 22577140
    218906 4dxa:A (1.95) BS02 MG 3.6.5.2 GO:0003924 ... P61224 22577140
    218907 4dxb:A (2.29) BS01 ZN 3.5.2.6 GO:0008643 ... P0AEX9
    P62593
    22720063
    218908 4dxb:A (2.29) BS02 ZN 3.5.2.6 GO:0008643 ... P0AEX9
    P62593
    22720063
    218909 4dxb:B (2.29) BS01 ZN 3.5.2.6 GO:0008643 ... P0AEX9
    P62593
    22720063
    218910 4dxb:B (2.29) BS02 ZN 3.5.2.6 GO:0008643 ... P0AEX9
    P62593
    22720063
    218911 4dxc:A (2.3) BS01 ZN 3.5.2.6 GO:0008643 ... P0AEX9
    P62593
    22720063
    218912 4dxc:A (2.3) BS02 ZN 3.5.2.6 GO:0008643 ... P0AEX9
    P62593
    22720063
    218913 4dxd:A (2.01) BS01 GDP ? GO:0003924 ... P0A031 22440737
    218914 4dxd:A (2.01) BS02 9PC ? GO:0003924 ... P0A031 22440737 BindingDB: IC50=55nM, EC50=4000nM
    218915 4dxg:A (2.5) BS01 GAL ? GO:0005576 ... A0A0H3K6A3 22949551
    218916 4dxg:A (2.5) BS02 SIA ? GO:0005576 ... A0A0H3K6A3 22949551
    218917 4dxg:A (2.5) BS03 FUC ? GO:0005576 ... A0A0H3K6A3 22949551
    218918 4dxg:A (2.5) BS04 PIN ? GO:0005576 ... A0A0H3K6A3 22949551
    218919 4dxh:A (1.12) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 22531044
    218920 4dxh:A (1.12) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 22531044
    218921 4dxh:A (1.12) BS03 NAJ 1.1.1.1 GO:0004022 ... P00327 22531044
    218922 4dxh:A (1.12) BS04 ETF 1.1.1.1 GO:0004022 ... P00327 22531044 MOAD: Ki=8.4uM
    218923 4dxh:B (1.12) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 22531044
    218924 4dxh:B (1.12) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 22531044
    218925 4dxh:B (1.12) BS03 NAJ 1.1.1.1 GO:0004022 ... P00327 22531044
    218926 4dxh:B (1.12) BS04 ETF 1.1.1.1 GO:0004022 ... P00327 22531044 MOAD: Ki=8.4uM
    218927 4dxj:A (2.35) BS01 MG 2.5.1.10 GO:0004161 ... Q95WL3 22715997
    218928 4dxj:A (2.35) BS02 MG 2.5.1.10 GO:0004161 ... Q95WL3 22715997
    218929 4dxj:A (2.35) BS03 0M9 2.5.1.10 GO:0004161 ... Q95WL3 22715997 MOAD: ic50=38nM
    218930 4dxj:A (2.35) BS04 IPE 2.5.1.10 GO:0004161 ... Q95WL3 22715997
    218931 4dxj:B (2.35) BS01 MG 2.5.1.10 GO:0004161 ... Q95WL3 22715997
    218932 4dxj:B (2.35) BS02 MG 2.5.1.10 GO:0004161 ... Q95WL3 22715997
    218933 4dxj:B (2.35) BS03 0M9 2.5.1.10 GO:0004161 ... Q95WL3 22715997 MOAD: ic50=38nM
    218934 4dxj:B (2.35) BS04 IPE 2.5.1.10 GO:0004161 ... Q95WL3 22715997
    218935 4dxj:C (2.35) BS01 MG 2.5.1.10 GO:0004161 ... Q95WL3 22715997
    218936 4dxj:C (2.35) BS02 MG 2.5.1.10 GO:0004161 ... Q95WL3 22715997
    218937 4dxj:C (2.35) BS03 0M9 2.5.1.10 GO:0004161 ... Q95WL3 22715997 MOAD: ic50=38nM
    218938 4dxj:C (2.35) BS04 IPE 2.5.1.10 GO:0004161 ... Q95WL3 22715997
    218939 4dxl:A (2.0) BS01 C5P 2.7.1.148 GO:0005524 ... B1MKD5 25613812
    218940 4dxl:A (2.0) BS02 ATP 2.7.1.148 GO:0005524 ... B1MKD5 25613812
    218941 4dxp:A (1.75) BS01 MG N/A GO:0006091 ... N/A 25565105
    218942 4dxp:A (1.75) BS02 MG N/A GO:0006091 ... N/A 25565105
    218943 4dxr:A (2.32) BS01 peptide ? N/A Q9UH99 22632968
    218944 4dxr:A (2.32) BS02 DMU ? N/A Q9UH99 22632968
    218945 4dxs:A (2.71) BS01 peptide ? N/A Q9UH99 22632968
    218946 4dxu:A (1.46) BS01 peptide 3.4.21.- GO:0005576 ... P24627 N/A
    218947 4dxu:A (1.46) BS02 FE 3.4.21.- GO:0005576 ... P24627 N/A
    218948 4dxu:A (1.46) BS03 CO3 3.4.21.- GO:0005576 ... P24627 N/A
    218949 4dxu:A (1.46) BS04 ACA 3.4.21.- GO:0005576 ... P24627 N/A
    218950 4dxv:A (1.8) BS01 MG 4.3.3.7 GO:0005737 ... D0CFC3 N/A
    218951 4dxw:A (3.052) BS01 CA ? GO:0001518 ... A0ACD6B9R7 22678295
    218952 4dxx:A (1.66) BS01 ZN 2.4.2.29 GO:0002099 ... P28720 24975703
    218953 4dxy:A (2.0) BS01 HEM ? GO:0004497 ... Q2G8A2 22820521
    218954 4dy1:A (2.045) BS01 ZN 2.4.2.29 GO:0002099 ... P28720 25951081
    218955 4dy4:A (1.2) BS01 FMN 1.6.5.2 GO:0003955 ... A1A9Q9 N/A
    218956 4dy4:C (1.2) BS01 FMN 1.6.5.2 GO:0003955 ... A1A9Q9 N/A
    218957 4dy4:C (1.2) BS02 FMN 1.6.5.2 GO:0003955 ... A1A9Q9 N/A
    218958 4dy6:A (2.2) BS01 A22 2.7.1.23 GO:0003951 ... Q8Y8D7 17686780
    218959 4dy7:A (2.8) BS01 CA 3.4.21.5 GO:0004252 ... P00734 22618708
    218960 4dy7:F (2.8) BS01 CA ? GO:0004867 ... P07093 22618708
    218961 4dy9:A (2.082) BS01 HEM ? GO:0005515 ... Q4QEN5 22372542
    218962 4dya:A (2.75) BS01 0MF ? GO:0003723 ... Q1K9H2 N/A
    218963 4dya:A (2.75) BS02 0MF ? GO:0003723 ... Q1K9H2 N/A
    218964 4dya:B (2.75) BS01 0MF ? GO:0003723 ... Q1K9H2 N/A
    218965 4dya:B (2.75) BS02 0MF ? GO:0003723 ... Q1K9H2 N/A
    218966 4dyb:A (2.8) BS01 0MH ? GO:0003723 ... Q1K9H2 N/A
    218967 4dyb:A (2.8) BS02 0MH ? GO:0003723 ... Q1K9H2 N/A
    218968 4dyb:B (2.8) BS01 0MH ? GO:0003723 ... Q1K9H2 N/A
    218969 4dyb:B (2.8) BS02 0MH ? GO:0003723 ... Q1K9H2 N/A
    218970 4dyd:A (1.95) BS01 NAD 1.1.1.35 GO:0003857 ... B1P3E1 23073461
    218971 4dyg:A (1.7) BS01 ZN 3.2.1.14 GO:0004568 ... Q9FRV0 22831795
    218972 4dyg:A (1.7) BS02 ZN 3.2.1.14 GO:0004568 ... Q9FRV0 22831795
    218973 4dyg:B (1.7) BS01 ZN 3.2.1.14 GO:0004568 ... Q9FRV0 22831795
    218974 4dyk:A (2.0) BS01 ZN ? GO:0004000 ... Q9HZ64 N/A
    218975 4dyk:A (2.0) BS02 MG ? GO:0004000 ... Q9HZ64 N/A
    218976 4dyk:B (2.0) BS01 ZN ? GO:0004000 ... Q9HZ64 N/A
    218977 4dyk:B (2.0) BS02 MG ? GO:0004000 ... Q9HZ64 N/A
    218978 4dym:A (2.42) BS01 IYZ 2.7.11.30 GO:0004672 ... Q04771 N/A
    218979 4dyn:A (2.4) BS01 0MR ? GO:0003723 ... Q1K9H2 N/A
    218980 4dyn:A (2.4) BS02 0MR ? GO:0003723 ... Q1K9H2 N/A
    218981 4dyn:B (2.4) BS01 0MR ? GO:0003723 ... Q1K9H2 N/A
    218982 4dyn:B (2.4) BS02 0MR ? GO:0003723 ... Q1K9H2 N/A
    218983 4dyo:A (2.2) BS01 ZN 3.4.11.21 GO:0004177 ... Q9ULA0 22720794
    218984 4dyo:A (2.2) BS02 ZN 3.4.11.21 GO:0004177 ... Q9ULA0 22720794
    218985 4dyo:A (2.2) BS03 SD4 3.4.11.21 GO:0004177 ... Q9ULA0 22720794
    218986 4dyp:A (2.82) BS01 0MS ? GO:0003723 ... Q1K9H2 N/A
    218987 4dyp:A (2.82) BS02 0MS ? GO:0003723 ... Q1K9H2 N/A
    218988 4dyp:B (2.82) BS01 0MS ? GO:0003723 ... Q1K9H2 N/A
    218989 4dyp:B (2.82) BS02 0MS ? GO:0003723 ... Q1K9H2 N/A
    218990 4dyu:A (2.75) BS01 ZN 1.16.-.- GO:0003677 ... Q7CJ65 N/A
    218991 4dyu:B (2.75) BS01 ZN 1.16.-.- GO:0003677 ... Q7CJ65 N/A
    218992 4dyu:C (2.75) BS01 ZN 1.16.-.- GO:0003677 ... Q7CJ65 N/A
    218993 4dyu:D (2.75) BS01 ZN 1.16.-.- GO:0003677 ... Q7CJ65 N/A
    218994 4dyu:E (2.75) BS01 ZN 1.16.-.- GO:0003677 ... Q7CJ65 N/A
    218995 4dyu:F (2.75) BS01 ZN 1.16.-.- GO:0003677 ... Q7CJ65 N/A
    218996 4dyu:H (2.75) BS01 ZN 1.16.-.- GO:0003677 ... Q7CJ65 N/A
    218997 4dyu:I (2.75) BS01 ZN 1.16.-.- GO:0003677 ... Q7CJ65 N/A
    218998 4dyu:J (2.75) BS01 ZN 1.16.-.- GO:0003677 ... Q7CJ65 N/A
    218999 4dyu:K (2.75) BS01 ZN 1.16.-.- GO:0003677 ... Q7CJ65 N/A
    219000 4dyu:L (2.75) BS01 ZN 1.16.-.- GO:0003677 ... Q7CJ65 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).