SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 1118 1119 1120 1121 1122 1123 1124 1125 1126 1127 1128 1129 1130 1131 1132 1133 1134 1135 1136 1137 1138 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    225401 4g4s:I (2.49) BS01 MG 3.4.25.1 GO:0004298 ... P25043 22930756
    225402 4g4s:J (2.49) BS01 MG 3.4.25.1 GO:0005515 ... P25451 22930756
    225403 4g4s:J (2.49) BS02 MG 3.4.25.1 GO:0005515 ... P25451 22930756
    225404 4g4s:L (2.49) BS01 LDZ 3.4.25.1 GO:0004298 ... P30656 22930756
    225405 4g4s:L (2.49) BS02 MG 3.4.25.1 GO:0004298 ... P30656 22930756
    225406 4g4s:M (2.49) BS01 LDZ 3.4.25.1 GO:0003674 ... P23724 22930756
    225407 4g4s:M (2.49) BS02 MG 3.4.25.1 GO:0003674 ... P23724 22930756
    225408 4g4s:M (2.49) BS03 MG 3.4.25.1 GO:0003674 ... P23724 22930756
    225409 4g4v:A (1.9) BS01 API N/A GO:0009279 ... N/A N/A
    225410 4g4w:A (1.9) BS01 ALA N/A GO:0009279 ... N/A N/A
    225411 4g4x:A (1.5) BS01 DAL N/A GO:0009279 ... N/A N/A
    225412 4g4y:A (1.7) BS01 ALA ? GO:0016020 ... Q6RYW5 N/A
    225413 4g4y:B (1.7) BS01 ALA ? GO:0016020 ... Q6RYW5 N/A
    225414 4g4y:C (1.7) BS01 ALA ? GO:0016020 ... Q6RYW5 N/A
    225415 4g4y:D (1.7) BS01 ALA ? GO:0016020 ... Q6RYW5 N/A
    225416 4g4y:E (1.7) BS01 ALA ? GO:0016020 ... Q6RYW5 N/A
    225417 4g4y:F (1.7) BS01 ALA ? GO:0016020 ... Q6RYW5 N/A
    225418 4g4y:G (1.7) BS01 ALA ? GO:0016020 ... Q6RYW5 N/A
    225419 4g4y:H (1.7) BS01 ALA ? GO:0016020 ... Q6RYW5 N/A
    225420 4g4z:A (1.8) BS01 DAL ? GO:0016020 ... Q6RYW5 N/A
    225421 4g4z:B (1.8) BS01 DAL ? GO:0016020 ... Q6RYW5 N/A
    225422 4g4z:C (1.8) BS01 DAL ? GO:0016020 ... Q6RYW5 N/A
    225423 4g4z:D (1.8) BS01 DAL ? GO:0016020 ... Q6RYW5 N/A
    225424 4g4z:E (1.8) BS01 DAL ? GO:0016020 ... Q6RYW5 N/A
    225425 4g4z:F (1.8) BS01 DAL ? GO:0016020 ... Q6RYW5 N/A
    225426 4g4z:G (1.8) BS01 DAL ? GO:0016020 ... Q6RYW5 N/A
    225427 4g4z:H (1.8) BS01 DAL ? GO:0016020 ... Q6RYW5 N/A
    225428 4g50:A (1.75) BS01 861 5.2.1.8 GO:0003755 ... Q12306
    Q3JK38
    24366729
    225429 4g50:B (1.75) BS01 861 5.2.1.8 GO:0003755 ... Q12306
    Q3JK38
    24366729
    225430 4g51:A (2.5) BS01 HEM ? GO:0004601 ... P80043 23275172
    225431 4g51:B (2.5) BS01 NO ? GO:0004601 ... P80044 23275172
    225432 4g51:B (2.5) BS02 HEM ? GO:0004601 ... P80044 23275172
    225433 4g51:C (2.5) BS01 HEM ? GO:0004601 ... P80043 23275172
    225434 4g51:D (2.5) BS01 NO ? GO:0004601 ... P80044 23275172
    225435 4g51:D (2.5) BS02 HEM ? GO:0004601 ... P80044 23275172
    225436 4g55:A (1.69) BS01 VH2 ? GO:0005198 ... Q00610 21816279
    225437 4g56:A (2.95) BS01 SAH 2.1.1.320 GO:0003714 ... Q6NUA1 23451136
    225438 4g56:C (2.95) BS01 SAH 2.1.1.320 GO:0003714 ... Q6NUA1 23451136
    225439 4g5d:A (1.8) BS01 NDP 1.1.1.- GO:0001516 ... P22045 25945716
    225440 4g5d:B (1.8) BS01 NDP 1.1.1.- GO:0001516 ... P22045 25945716
    225441 4g5f:A (2.33) BS01 0JD 6.3.2.1 GO:0000287 ... P9WIL5 23872845 MOAD: Kd=0.7mM
    225442 4g5f:A (2.33) BS02 15N 6.3.2.1 GO:0000287 ... P9WIL5 23872845 MOAD: Kd=0.88mM
    225443 4g5f:B (2.33) BS01 15N 6.3.2.1 GO:0000287 ... P9WIL5 23872845 MOAD: Kd=0.88mM
    225444 4g5f:B (2.33) BS02 0JD 6.3.2.1 GO:0000287 ... P9WIL5 23872845 MOAD: Kd=0.7mM
    225445 4g5g:A (2.3) BS01 peptide ? GO:0000287 ... P0CE47 22812377
    225446 4g5g:A (2.3) BS02 GDP ? GO:0000287 ... P0CE47 22812377
    225447 4g5h:A (1.88) BS01 NAP 5.1.3.2 GO:0003978 ... A0A0H3JPH0 24157361
    225448 4g5h:A (1.88) BS02 UD7 5.1.3.2 GO:0003978 ... A0A0H3JPH0 24157361
    225449 4g5h:A (1.88) BS03 UD7 5.1.3.2 GO:0003978 ... A0A0H3JPH0 24157361
    225450 4g5i:A (2.4) BS01 CA 3.1.1.4 GO:0002446 ... P00592 N/A
    225451 4g5i:A (2.4) BS02 CA 3.1.1.4 GO:0002446 ... P00592 N/A
    225452 4g5i:A (2.4) BS03 DB7 3.1.1.4 GO:0002446 ... P00592 N/A
    225453 4g5j:A (2.8) BS01 0WN 2.7.10.1 GO:0004672 ... P00533 22888144
    225454 4g5j:A (2.8) BS02 0WM 2.7.10.1 GO:0004672 ... P00533 22888144 BindingDB: IC50=0.500000nM, Kd=0.120000nM
    225455 4g5j:A (2.8) BS03 0WM 2.7.10.1 GO:0004672 ... P00533 22888144 BindingDB: IC50=0.500000nM, Kd=0.120000nM
    225456 4g5o:A (2.9) BS01 peptide ? GO:0000139 ... P08754 22952234
    225457 4g5o:A (2.9) BS02 peptide ? GO:0000139 ... P08754 22952234
    225458 4g5o:A (2.9) BS03 GDP ? GO:0000139 ... P08754 22952234
    225459 4g5o:B (2.9) BS01 peptide ? GO:0000139 ... P08754 22952234
    225460 4g5o:B (2.9) BS02 GDP ? GO:0000139 ... P08754 22952234
    225461 4g5o:C (2.9) BS01 peptide ? GO:0000139 ... P08754 22952234
    225462 4g5o:C (2.9) BS02 peptide ? GO:0000139 ... P08754 22952234
    225463 4g5o:C (2.9) BS03 GDP ? GO:0000139 ... P08754 22952234
    225464 4g5o:D (2.9) BS01 peptide ? GO:0000139 ... P08754 22952234
    225465 4g5o:D (2.9) BS02 GDP ? GO:0000139 ... P08754 22952234
    225466 4g5p:A (3.17) BS01 0WN 2.7.10.1 GO:0004672 ... P00533 22888144
    225467 4g5q:A (2.9) BS01 peptide ? GO:0000132 ... P63096 22952234
    225468 4g5q:A (2.9) BS02 peptide ? GO:0000132 ... P63096 22952234
    225469 4g5q:A (2.9) BS03 GDP ? GO:0000132 ... P63096 22952234
    225470 4g5q:B (2.9) BS01 peptide ? GO:0000132 ... P63096 22952234
    225471 4g5q:B (2.9) BS02 GDP ? GO:0000132 ... P63096 22952234
    225472 4g5q:C (2.9) BS01 peptide ? GO:0000132 ... P63096 22952234
    225473 4g5q:C (2.9) BS02 peptide ? GO:0000132 ... P63096 22952234
    225474 4g5q:C (2.9) BS03 GDP ? GO:0000132 ... P63096 22952234
    225475 4g5q:D (2.9) BS01 peptide ? GO:0000132 ... P63096 22952234
    225476 4g5q:D (2.9) BS02 GDP ? GO:0000132 ... P63096 22952234
    225477 4g5r:A (3.481) BS01 peptide ? GO:0000139 ... P08754 22952234
    225478 4g5r:A (3.481) BS02 GDP ? GO:0000139 ... P08754 22952234
    225479 4g5r:B (3.481) BS01 peptide ? GO:0000139 ... P08754 22952234
    225480 4g5r:B (3.481) BS02 GDP ? GO:0000139 ... P08754 22952234
    225481 4g5r:C (3.481) BS01 peptide ? GO:0000139 ... P08754 22952234
    225482 4g5r:C (3.481) BS02 GDP ? GO:0000139 ... P08754 22952234
    225483 4g5r:D (3.481) BS01 peptide ? GO:0000139 ... P08754 22952234
    225484 4g5r:D (3.481) BS02 GDP ? GO:0000139 ... P08754 22952234
    225485 4g5s:A (3.62) BS01 peptide ? GO:0000139 ... P08754 22952234
    225486 4g5s:A (3.62) BS02 GDP ? GO:0000139 ... P08754 22952234
    225487 4g5s:B (3.62) BS01 peptide ? GO:0000139 ... P08754 22952234
    225488 4g5s:B (3.62) BS02 GDP ? GO:0000139 ... P08754 22952234
    225489 4g5s:C (3.62) BS01 peptide ? GO:0000139 ... P08754 22952234
    225490 4g5s:C (3.62) BS02 peptide ? GO:0000139 ... P08754 22952234
    225491 4g5s:C (3.62) BS03 GDP ? GO:0000139 ... P08754 22952234
    225492 4g5s:D (3.62) BS01 peptide ? GO:0000139 ... P08754 22952234
    225493 4g5y:A (1.8) BS01 ATP 6.3.2.1 GO:0000287 ... P9WIL5 23872845
    225494 4g5y:A (1.8) BS02 0OC 6.3.2.1 GO:0000287 ... P9WIL5 23872845 MOAD: Kd=1.69mM
    225495 4g5y:B (1.8) BS01 ATP 6.3.2.1 GO:0000287 ... P9WIL5 23872845
    225496 4g5y:B (1.8) BS02 0OC 6.3.2.1 GO:0000287 ... P9WIL5 23872845 MOAD: Kd=1.69mM
    225497 4g5y:B (1.8) BS03 0OC 6.3.2.1 GO:0000287 ... P9WIL5 23872845 MOAD: Kd=1.69mM
    225498 4g61:A (2.3) BS01 MG N/A N/A N/A 25263816
    225499 4g61:A (2.3) BS02 MG N/A N/A N/A 25263816
    225500 4g61:A (2.3) BS03 PO4 N/A N/A N/A 25263816
    225501 4g61:A (2.3) BS04 DTO N/A N/A N/A 25263816
    225502 4g61:B (2.3) BS01 PO4 N/A N/A N/A 25263816
    225503 4g61:B (2.3) BS02 MG N/A N/A N/A 25263816
    225504 4g61:B (2.3) BS03 MG N/A N/A N/A 25263816
    225505 4g61:B (2.3) BS04 DTO N/A N/A N/A 25263816
    225506 4g67:A (1.8) BS01 SAH ? GO:0035243 ... Q2T1U7 23382856
    225507 4g68:A (1.8) BS01 XYS ? N/A J9PBT4 22918832
    225508 4g68:A (1.8) BS02 XYP ? N/A J9PBT4 22918832
    225509 4g68:A (1.8) BS03 XYP ? N/A J9PBT4 22918832
    225510 4g68:B (1.8) BS01 XYS ? N/A J9PBT5 22918832
    225511 4g68:B (1.8) BS02 XYP ? N/A J9PBT5 22918832
    225512 4g68:B (1.8) BS03 XYP ? N/A J9PBT5 22918832
    225513 4g69:A (2.0) BS01 peptide ? N/A Q12959 23185543
    225514 4g6a:C (2.501) BS01 peptide N/A N/A N/A 22973046
    225515 4g6a:D (2.501) BS01 peptide N/A N/A N/A 22973046
    225516 4g6a:D (2.501) BS02 peptide N/A N/A N/A 22973046
    225517 4g6a:H (2.501) BS01 peptide N/A N/A N/A 22973046
    225518 4g6a:L (2.501) BS01 peptide N/A N/A N/A 22973046
    225519 4g6f:B (2.1) BS01 peptide N/A N/A N/A 23151583
    225520 4g6f:H (2.1) BS01 peptide N/A N/A N/A 23151583
    225521 4g6g:A (2.39) BS01 TRT 1.6.5.9 GO:0003954 ... P32340 23086143
    225522 4g6g:A (2.39) BS02 TRT 1.6.5.9 GO:0003954 ... P32340 23086143
    225523 4g6g:A (2.39) BS03 FAD 1.6.5.9 GO:0003954 ... P32340 23086143
    225524 4g6g:A (2.39) BS04 MG 1.6.5.9 GO:0003954 ... P32340 23086143
    225525 4g6g:A (2.39) BS05 MG 1.6.5.9 GO:0003954 ... P32340 23086143
    225526 4g6g:A (2.39) BS06 MG 1.6.5.9 GO:0003954 ... P32340 23086143
    225527 4g6g:A (2.39) BS07 MG 1.6.5.9 GO:0003954 ... P32340 23086143
    225528 4g6g:A (2.39) BS08 TRT 1.6.5.9 GO:0003954 ... P32340 23086143
    225529 4g6g:B (2.39) BS01 TRT 1.6.5.9 GO:0003954 ... P32340 23086143
    225530 4g6g:B (2.39) BS02 TRT 1.6.5.9 GO:0003954 ... P32340 23086143
    225531 4g6g:B (2.39) BS03 TRT 1.6.5.9 GO:0003954 ... P32340 23086143
    225532 4g6g:B (2.39) BS04 FAD 1.6.5.9 GO:0003954 ... P32340 23086143
    225533 4g6g:B (2.39) BS05 MG 1.6.5.9 GO:0003954 ... P32340 23086143
    225534 4g6g:B (2.39) BS06 MG 1.6.5.9 GO:0003954 ... P32340 23086143
    225535 4g6g:B (2.39) BS07 MG 1.6.5.9 GO:0003954 ... P32340 23086143
    225536 4g6h:A (2.262) BS01 FAD 1.6.5.9 GO:0003954 ... P32340 23086143
    225537 4g6h:A (2.262) BS02 NAI 1.6.5.9 GO:0003954 ... P32340 23086143
    225538 4g6h:A (2.262) BS03 MG 1.6.5.9 GO:0003954 ... P32340 23086143
    225539 4g6h:A (2.262) BS04 MG 1.6.5.9 GO:0003954 ... P32340 23086143
    225540 4g6h:A (2.262) BS05 MG 1.6.5.9 GO:0003954 ... P32340 23086143
    225541 4g6h:B (2.262) BS01 MG 1.6.5.9 GO:0003954 ... P32340 23086143
    225542 4g6h:B (2.262) BS02 NAI 1.6.5.9 GO:0003954 ... P32340 23086143
    225543 4g6h:B (2.262) BS03 FAD 1.6.5.9 GO:0003954 ... P32340 23086143
    225544 4g6i:A (1.78) BS01 RS3 N/A N/A N/A 24816110
    225545 4g6i:A (1.78) BS02 RS3 N/A N/A N/A 24816110
    225546 4g6i:B (1.78) BS01 RS3 N/A N/A N/A 24816110
    225547 4g6i:B (1.78) BS02 RS3 N/A N/A N/A 24816110
    225548 4g6i:C (1.78) BS01 RS3 N/A N/A N/A 24816110
    225549 4g6n:A (2.0) BS01 EK0 2.7.11.24 GO:0000165 ... P28482 N/A BindingDB: Ki=5248.1nM
    225550 4g6o:A (2.2) BS01 E28 2.7.11.24 GO:0000165 ... P28482 N/A
    225551 4g6u:A (2.353) BS01 ZN ? GO:0004530 ... F2WK69 23236156
    225552 4g6w:X (2.3) BS01 PBX 2.1.1.45 GO:0000900 ... P04818 N/A
    225553 4g6z:A (2.05) BS01 GLU 6.1.1.17 GO:0000049 ... Q2SX36 28303005
    225554 4g70:A (2.6) BS01 HEM 7.1.1.9 GO:0004129 ... Q5SJ79 N/A
    225555 4g70:A (2.6) BS02 HAS 7.1.1.9 GO:0004129 ... Q5SJ79 N/A
    225556 4g70:A (2.6) BS03 CU 7.1.1.9 GO:0004129 ... Q5SJ79 N/A
    225557 4g70:B (2.6) BS01 CUA 7.1.1.9 GO:0004129 ... Q5SJ80 N/A
    225558 4g71:A (2.9) BS01 CUB 7.1.1.9 GO:0004129 ... Q5SJ79 N/A
    225559 4g71:A (2.9) BS02 HEM 7.1.1.9 GO:0004129 ... Q5SJ79 N/A
    225560 4g71:A (2.9) BS03 HAS 7.1.1.9 GO:0004129 ... Q5SJ79 N/A
    225561 4g71:B (2.9) BS01 CUA 7.1.1.9 GO:0004129 ... Q5SJ80 N/A
    225562 4g72:A (3.19) BS01 CU 7.1.1.9 GO:0004129 ... Q5SJ79 N/A
    225563 4g72:A (3.19) BS02 HEM 7.1.1.9 GO:0004129 ... Q5SJ79 N/A
    225564 4g72:A (3.19) BS03 HAS 7.1.1.9 GO:0004129 ... Q5SJ79 N/A
    225565 4g72:B (3.19) BS01 CUA 7.1.1.9 GO:0004129 ... Q5SJ80 N/A
    225566 4g73:A (2.522) BS01 MG 1.6.5.9 GO:0003954 ... P32340 23086143
    225567 4g73:A (2.522) BS02 UQ5 1.6.5.9 GO:0003954 ... P32340 23086143
    225568 4g73:A (2.522) BS03 FAD 1.6.5.9 GO:0003954 ... P32340 23086143
    225569 4g73:A (2.522) BS04 MG 1.6.5.9 GO:0003954 ... P32340 23086143
    225570 4g73:A (2.522) BS05 MG 1.6.5.9 GO:0003954 ... P32340 23086143
    225571 4g73:A (2.522) BS06 MG 1.6.5.9 GO:0003954 ... P32340 23086143
    225572 4g73:A (2.522) BS07 MG 1.6.5.9 GO:0003954 ... P32340 23086143
    225573 4g73:A (2.522) BS08 NAI 1.6.5.9 GO:0003954 ... P32340 23086143
    225574 4g73:B (2.522) BS01 NAI 1.6.5.9 GO:0003954 ... P32340 23086143
    225575 4g73:B (2.522) BS02 UQ5 1.6.5.9 GO:0003954 ... P32340 23086143
    225576 4g73:B (2.522) BS03 FAD 1.6.5.9 GO:0003954 ... P32340 23086143
    225577 4g73:B (2.522) BS04 MG 1.6.5.9 GO:0003954 ... P32340 23086143
    225578 4g73:B (2.522) BS05 MG 1.6.5.9 GO:0003954 ... P32340 23086143
    225579 4g73:B (2.522) BS06 MG 1.6.5.9 GO:0003954 ... P32340 23086143
    225580 4g73:B (2.522) BS07 MG 1.6.5.9 GO:0003954 ... P32340 23086143
    225581 4g74:A (2.48) BS01 UQ5 1.6.5.9 GO:0003954 ... P32340 23086143
    225582 4g74:A (2.48) BS02 UQ5 1.6.5.9 GO:0003954 ... P32340 23086143
    225583 4g74:A (2.48) BS03 TRT 1.6.5.9 GO:0003954 ... P32340 23086143
    225584 4g74:A (2.48) BS04 TRT 1.6.5.9 GO:0003954 ... P32340 23086143
    225585 4g74:A (2.48) BS05 FAD 1.6.5.9 GO:0003954 ... P32340 23086143
    225586 4g74:A (2.48) BS06 MG 1.6.5.9 GO:0003954 ... P32340 23086143
    225587 4g74:A (2.48) BS07 MG 1.6.5.9 GO:0003954 ... P32340 23086143
    225588 4g74:A (2.48) BS08 MG 1.6.5.9 GO:0003954 ... P32340 23086143
    225589 4g74:B (2.48) BS01 UQ5 1.6.5.9 GO:0003954 ... P32340 23086143
    225590 4g74:B (2.48) BS02 UQ5 1.6.5.9 GO:0003954 ... P32340 23086143
    225591 4g74:B (2.48) BS03 TRT 1.6.5.9 GO:0003954 ... P32340 23086143
    225592 4g74:B (2.48) BS04 FAD 1.6.5.9 GO:0003954 ... P32340 23086143
    225593 4g74:B (2.48) BS05 MG 1.6.5.9 GO:0003954 ... P32340 23086143
    225594 4g74:B (2.48) BS06 MG 1.6.5.9 GO:0003954 ... P32340 23086143
    225595 4g74:B (2.48) BS07 MG 1.6.5.9 GO:0003954 ... P32340 23086143
    225596 4g74:B (2.48) BS08 MG 1.6.5.9 GO:0003954 ... P32340 23086143
    225597 4g75:A (1.7) BS01 MG ? GO:0042742 ... Q1W548 22977250
    225598 4g77:A (1.98) BS01 FE 3.4.21.- GO:0005576 ... P24627 N/A
    225599 4g77:A (1.98) BS02 CO3 3.4.21.- GO:0005576 ... P24627 N/A
    225600 4g77:A (1.98) BS03 TLF 3.4.21.- GO:0005576 ... P24627 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).