SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    228201 4h0b:A (1.26) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 23192025
    228202 4h0b:A (1.26) BS02 OXY 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 23192025
    228203 4h0b:A (1.26) BS03 DMS 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 23192025
    228204 4h0d:A (1.498) BS01 ZZ7 3.5.2.6 GO:0008270 ... C7C422 N/A
    228205 4h0d:A (1.498) BS02 MN 3.5.2.6 GO:0008270 ... C7C422 N/A
    228206 4h0d:A (1.498) BS03 MN 3.5.2.6 GO:0008270 ... C7C422 N/A
    228207 4h0d:A (1.498) BS04 MN 3.5.2.6 GO:0008270 ... C7C422 N/A
    228208 4h0d:B (1.498) BS01 MN 3.5.2.6 GO:0008270 ... C7C422 N/A
    228209 4h0d:B (1.498) BS02 ZZ7 3.5.2.6 GO:0008270 ... C7C422 N/A
    228210 4h0d:B (1.498) BS03 MN 3.5.2.6 GO:0008270 ... C7C422 N/A
    228211 4h0d:B (1.498) BS04 MN 3.5.2.6 GO:0008270 ... C7C422 N/A
    228212 4h0e:A (1.973) BS01 dna ? GO:0003700 ... P96711 23109551
    228213 4h0e:A (1.973) BS02 dna ? GO:0003700 ... P96711 23109551
    228214 4h0e:B (1.973) BS01 dna ? GO:0003700 ... P96711 23109551
    228215 4h0e:B (1.973) BS02 dna ? GO:0003700 ... P96711 23109551
    228216 4h0f:A (2.4) BS01 ZN ? GO:0007155 ... Q8DZ80 23826314
    228217 4h0f:B (2.4) BS01 ZN ? GO:0007155 ... Q8DZ80 23826314
    228218 4h0h:B (2.0) BS01 peptide N/A N/A N/A 23733869
    228219 4h0i:A (2.4) BS01 MMA N/A N/A N/A 23733869
    228220 4h0j:A (2.0) BS01 HEC ? GO:0005506 ... P0A3X7 24685428
    228221 4h0j:B (2.0) BS01 HEC ? GO:0005506 ... P0A3X7 24685428
    228222 4h0j:C (2.0) BS01 HEC ? GO:0005506 ... P0A3X7 24685428
    228223 4h0j:D (2.0) BS01 HEC ? GO:0005506 ... P0A3X7 24685428
    228224 4h0j:E (2.0) BS01 HEC ? GO:0005506 ... P0A3X7 24685428
    228225 4h0j:F (2.0) BS01 HEC ? GO:0005506 ... P0A3X7 24685428
    228226 4h0k:A (1.95) BS01 HEC ? GO:0005506 ... P0A3X7 24685428
    228227 4h0k:B (1.95) BS01 HEC ? GO:0005506 ... P0A3X7 24685428
    228228 4h0l:A (3.25) BS01 peptide ? GO:0009055 ... P83791 23440205
    228229 4h0l:A (3.25) BS02 HEM ? GO:0009055 ... P83791 23440205
    228230 4h0l:A (3.25) BS03 HEM ? GO:0009055 ... P83791 23440205
    228231 4h0l:A (3.25) BS04 HEM ? GO:0009055 ... P83791 23440205
    228232 4h0l:A (3.25) BS05 QNO ? GO:0009055 ... P83791 23440205
    228233 4h0l:B (3.25) BS01 HEM ? GO:0008121 ... P83792 23440205
    228234 4h0l:B (3.25) BS02 QNO ? GO:0008121 ... P83792 23440205
    228235 4h0l:B (3.25) BS03 CLA ? GO:0008121 ... P83792 23440205
    228236 4h0l:C (3.25) BS01 peptide ? GO:0005506 ... P83793 23440205
    228237 4h0l:C (3.25) BS02 HEM ? GO:0005506 ... P83793 23440205
    228238 4h0l:D (3.25) BS01 FES 7.1.1.6 GO:0004497 ... P83794 23440205
    228239 4h0l:E (3.25) BS01 peptide ? GO:0009055 ... P83795 23440205
    228240 4h0l:F (3.25) BS01 peptide ? GO:0009055 ... P83796 23440205
    228241 4h0n:A (2.712) BS01 SAH 2.1.1.204
    2.1.1.37
    GO:0003886 ... A0A2H1VE33 23103599
    228242 4h0n:A (2.712) BS02 CA 2.1.1.204
    2.1.1.37
    GO:0003886 ... A0A2H1VE33 23103599
    228243 4h0n:B (2.712) BS01 SAH 2.1.1.204
    2.1.1.37
    GO:0003886 ... A0A2H1VE33 23103599
    228244 4h0n:B (2.712) BS02 CA 2.1.1.204
    2.1.1.37
    GO:0003886 ... A0A2H1VE33 23103599
    228245 4h0n:C (2.712) BS01 SAH 2.1.1.204
    2.1.1.37
    GO:0003886 ... A0A2H1VE33 23103599
    228246 4h0n:C (2.712) BS02 CA 2.1.1.204
    2.1.1.37
    GO:0003886 ... A0A2H1VE33 23103599
    228247 4h0n:D (2.712) BS01 SAH 2.1.1.204
    2.1.1.37
    GO:0003886 ... A0A2H1VE33 23103599
    228248 4h0n:D (2.712) BS02 CA 2.1.1.204
    2.1.1.37
    GO:0003886 ... A0A2H1VE33 23103599
    228249 4h0t:A (2.2) BS01 AR6 2.4.2.31 GO:0005576 ... Q46220 23382240
    228250 4h0t:B (2.2) BS01 LAR 3.6.4.- GO:0000287 ... P68135 23382240
    228251 4h0t:B (2.2) BS02 ATP 3.6.4.- GO:0000287 ... P68135 23382240
    228252 4h0u:A (2.75) BS01 UMP 2.1.1.45 GO:0004799 ... Q8NS38 N/A
    228253 4h0u:A (2.75) BS02 UMP 2.1.1.45 GO:0004799 ... Q8NS38 N/A
    228254 4h0u:B (2.75) BS01 UMP 2.1.1.45 GO:0004799 ... Q8NS38 N/A
    228255 4h0u:B (2.75) BS02 UMP 2.1.1.45 GO:0004799 ... Q8NS38 N/A
    228256 4h0u:C (2.75) BS01 UMP 2.1.1.45 GO:0004799 ... Q8NS38 N/A
    228257 4h0u:D (2.75) BS01 UMP 2.1.1.45 GO:0004799 ... Q8NS38 N/A
    228258 4h0u:D (2.75) BS02 UMP 2.1.1.45 GO:0004799 ... Q8NS38 N/A
    228259 4h0v:A (2.03) BS01 NAD 2.4.2.31 GO:0005576 ... Q46220 23382240
    228260 4h0v:B (2.03) BS01 ATP 3.6.4.- GO:0000287 ... P68135 23382240
    228261 4h0v:B (2.03) BS02 LAR 3.6.4.- GO:0000287 ... P68135 23382240
    228262 4h0w:A (2.4) BS01 FE ? GO:0005506 ... P02787 23256035
    228263 4h0w:A (2.4) BS02 CO3 ? GO:0005506 ... P02787 23256035
    228264 4h0w:A (2.4) BS03 CO3 ? GO:0005506 ... P02787 23256035
    228265 4h0w:A (2.4) BS04 NTA ? GO:0005506 ... P02787 23256035
    228266 4h0x:A (2.33) BS01 NAD 2.4.2.31 GO:0005576 ... Q46220 23382240
    228267 4h0x:B (2.33) BS01 ATP 3.6.4.- GO:0000287 ... P68135 23382240
    228268 4h0x:B (2.33) BS02 LAR 3.6.4.- GO:0000287 ... P68135 23382240
    228269 4h0y:A (1.94) BS01 NAD 2.4.2.31 GO:0005576 ... Q46220 23382240
    228270 4h0y:B (1.94) BS01 ATP 3.6.4.- GO:0000287 ... P68135 23382240
    228271 4h0y:B (1.94) BS02 LAR 3.6.4.- GO:0000287 ... P68135 23382240
    228272 4h0z:A (2.0) BS01 AMU 3.2.2.22 GO:0017148 ... D9J2T9 N/A
    228273 4h10:A (2.402) BS01 dna ? GO:0003700 ... O00327 23229515
    228274 4h10:A (2.402) BS02 dna ? GO:0003700 ... O00327 23229515
    228275 4h10:B (2.402) BS01 dna 2.3.1.48 GO:0000981 ... O15516 23229515
    228276 4h10:B (2.402) BS02 dna 2.3.1.48 GO:0000981 ... O15516 23229515
    228277 4h12:A (2.06) BS01 ZN 2.1.1.-
    2.1.1.359
    GO:0005634 ... Q9BYW2 23043551
    228278 4h12:A (2.06) BS02 ZN 2.1.1.-
    2.1.1.359
    GO:0005634 ... Q9BYW2 23043551
    228279 4h12:A (2.06) BS03 ZN 2.1.1.-
    2.1.1.359
    GO:0005634 ... Q9BYW2 23043551
    228280 4h12:A (2.06) BS04 SAH 2.1.1.-
    2.1.1.359
    GO:0005634 ... Q9BYW2 23043551
    228281 4h13:A (3.07) BS01 peptide ? GO:0009055 ... P83791 23440205
    228282 4h13:A (3.07) BS02 HEM ? GO:0009055 ... P83791 23440205
    228283 4h13:A (3.07) BS03 HEM ? GO:0009055 ... P83791 23440205
    228284 4h13:A (3.07) BS04 HEM ? GO:0009055 ... P83791 23440205
    228285 4h13:A (3.07) BS05 TDS ? GO:0009055 ... P83791 23440205
    228286 4h13:B (3.07) BS01 HEM ? GO:0008121 ... P83792 23440205
    228287 4h13:B (3.07) BS02 TDS ? GO:0008121 ... P83792 23440205
    228288 4h13:B (3.07) BS03 TDS ? GO:0008121 ... P83792 23440205
    228289 4h13:B (3.07) BS04 CLA ? GO:0008121 ... P83792 23440205
    228290 4h13:C (3.07) BS01 peptide ? GO:0005506 ... P83793 23440205
    228291 4h13:C (3.07) BS02 HEM ? GO:0005506 ... P83793 23440205
    228292 4h13:D (3.07) BS01 FES 7.1.1.6 GO:0004497 ... P83794 23440205
    228293 4h13:E (3.07) BS01 peptide ? GO:0009055 ... P83795 23440205
    228294 4h13:F (3.07) BS01 peptide ? GO:0009055 ... P83796 23440205
    228295 4h13:G (3.07) BS01 peptide ? GO:0009055 ... P83797 23440205
    228296 4h15:A (1.45) BS01 CA 1.1.1.- GO:0006629 ... Q92YJ2 N/A
    228297 4h15:B (1.45) BS01 CA 1.1.1.- GO:0006629 ... Q92YJ2 N/A
    228298 4h15:B (1.45) BS02 CA 1.1.1.- GO:0006629 ... Q92YJ2 N/A
    228299 4h15:B (1.45) BS03 CA 1.1.1.- GO:0006629 ... Q92YJ2 N/A
    228300 4h15:C (1.45) BS01 CA 1.1.1.- GO:0006629 ... Q92YJ2 N/A
    228301 4h15:C (1.45) BS02 CA 1.1.1.- GO:0006629 ... Q92YJ2 N/A
    228302 4h15:C (1.45) BS03 CA 1.1.1.- GO:0006629 ... Q92YJ2 N/A
    228303 4h15:D (1.45) BS01 CA 1.1.1.- GO:0006629 ... Q92YJ2 N/A
    228304 4h16:A (2.0) BS01 MG 1.1.1.- GO:0006629 ... Q92YJ2 N/A
    228305 4h19:A (1.8) BS01 CA ? GO:0000287 ... Q7CU39 N/A
    228306 4h19:A (1.8) BS02 MG ? GO:0000287 ... Q7CU39 N/A
    228307 4h19:A (1.8) BS03 0YR ? GO:0000287 ... Q7CU39 N/A
    228308 4h19:B (1.8) BS01 CA ? GO:0000287 ... Q7CU39 N/A
    228309 4h19:B (1.8) BS02 MG ? GO:0000287 ... Q7CU39 N/A
    228310 4h19:B (1.8) BS03 0YR ? GO:0000287 ... Q7CU39 N/A
    228311 4h19:C (1.8) BS01 CA ? GO:0000287 ... Q7CU39 N/A
    228312 4h19:C (1.8) BS02 MG ? GO:0000287 ... Q7CU39 N/A
    228313 4h19:C (1.8) BS03 0YR ? GO:0000287 ... Q7CU39 N/A
    228314 4h19:D (1.8) BS01 CA ? GO:0000287 ... Q7CU39 N/A
    228315 4h19:D (1.8) BS02 MG ? GO:0000287 ... Q7CU39 N/A
    228316 4h19:D (1.8) BS03 0YR ? GO:0000287 ... Q7CU39 N/A
    228317 4h19:E (1.8) BS01 MG ? GO:0000287 ... Q7CU39 N/A
    228318 4h19:E (1.8) BS02 0YR ? GO:0000287 ... Q7CU39 N/A
    228319 4h19:E (1.8) BS03 CA ? GO:0000287 ... Q7CU39 N/A
    228320 4h19:F (1.8) BS01 CA ? GO:0000287 ... Q7CU39 N/A
    228321 4h19:F (1.8) BS02 MG ? GO:0000287 ... Q7CU39 N/A
    228322 4h19:F (1.8) BS03 0YR ? GO:0000287 ... Q7CU39 N/A
    228323 4h19:G (1.8) BS01 CA ? GO:0000287 ... Q7CU39 N/A
    228324 4h19:G (1.8) BS02 MG ? GO:0000287 ... Q7CU39 N/A
    228325 4h19:G (1.8) BS03 0YR ? GO:0000287 ... Q7CU39 N/A
    228326 4h19:H (1.8) BS01 CA ? GO:0000287 ... Q7CU39 N/A
    228327 4h19:H (1.8) BS02 MG ? GO:0000287 ... Q7CU39 N/A
    228328 4h19:H (1.8) BS03 0YR ? GO:0000287 ... Q7CU39 N/A
    228329 4h19:I (1.8) BS01 CA ? GO:0000287 ... Q7CU39 N/A
    228330 4h19:I (1.8) BS02 MG ? GO:0000287 ... Q7CU39 N/A
    228331 4h19:I (1.8) BS03 0YR ? GO:0000287 ... Q7CU39 N/A
    228332 4h19:J (1.8) BS01 CA ? GO:0000287 ... Q7CU39 N/A
    228333 4h19:J (1.8) BS02 MG ? GO:0000287 ... Q7CU39 N/A
    228334 4h19:J (1.8) BS03 0YR ? GO:0000287 ... Q7CU39 N/A
    228335 4h19:K (1.8) BS01 CA ? GO:0000287 ... Q7CU39 N/A
    228336 4h19:K (1.8) BS02 MG ? GO:0000287 ... Q7CU39 N/A
    228337 4h19:K (1.8) BS03 0YR ? GO:0000287 ... Q7CU39 N/A
    228338 4h19:L (1.8) BS01 MG ? GO:0000287 ... Q7CU39 N/A
    228339 4h19:L (1.8) BS02 0YR ? GO:0000287 ... Q7CU39 N/A
    228340 4h19:L (1.8) BS03 CA ? GO:0000287 ... Q7CU39 N/A
    228341 4h19:M (1.8) BS01 CA ? GO:0000287 ... Q7CU39 N/A
    228342 4h19:M (1.8) BS02 MG ? GO:0000287 ... Q7CU39 N/A
    228343 4h19:M (1.8) BS03 0YR ? GO:0000287 ... Q7CU39 N/A
    228344 4h19:N (1.8) BS01 CA ? GO:0000287 ... Q7CU39 N/A
    228345 4h19:N (1.8) BS02 MG ? GO:0000287 ... Q7CU39 N/A
    228346 4h19:N (1.8) BS03 0YR ? GO:0000287 ... Q7CU39 N/A
    228347 4h19:O (1.8) BS01 CA ? GO:0000287 ... Q7CU39 N/A
    228348 4h19:O (1.8) BS02 MG ? GO:0000287 ... Q7CU39 N/A
    228349 4h19:O (1.8) BS03 0YR ? GO:0000287 ... Q7CU39 N/A
    228350 4h19:P (1.8) BS01 CA ? GO:0000287 ... Q7CU39 N/A
    228351 4h19:P (1.8) BS02 MG ? GO:0000287 ... Q7CU39 N/A
    228352 4h19:P (1.8) BS03 0YR ? GO:0000287 ... Q7CU39 N/A
    228353 4h1d:A (2.8975) BS01 DFP 3.4.21.105 GO:0004252 ... P09391 23609444
    228354 4h1e:A (1.9) BS01 10J 3.4.23.46 GO:0004190 ... P56817 22989333 MOAD: Ki=3nM
    228355 4h1e:B (1.9) BS01 10J 3.4.23.46 GO:0004190 ... P56817 22989333 MOAD: Ki=3nM
    228356 4h1g:A (2.15) BS01 GLC ? GO:0003777 ... C4YKK8
    P0AEX9
    23137538
    228357 4h1g:A (2.15) BS02 GLC ? GO:0003777 ... C4YKK8
    P0AEX9
    23137538
    228358 4h1g:A (2.15) BS03 GLC ? GO:0003777 ... C4YKK8
    P0AEX9
    23137538
    228359 4h1g:A (2.15) BS04 GLC ? GO:0003777 ... C4YKK8
    P0AEX9
    23137538
    228360 4h1g:A (2.15) BS05 ADP ? GO:0003777 ... C4YKK8
    P0AEX9
    23137538
    228361 4h1j:A (2.0) BS01 0YH 2.7.10.2 GO:0004672 ... Q14289 23153798 MOAD: ic50=1200nM
    BindingDB: IC50=1200nM
    228362 4h1l:A (3.3) BS01 peptide ? GO:0006955 ... P01903 23091041
    228363 4h1l:B (3.3) BS01 peptide ? GO:0006955 ... P79483 23091041
    228364 4h1l:D (3.3) BS01 peptide ? GO:0006955 ... P01903 23091041
    228365 4h1l:E (3.3) BS01 peptide ? GO:0006955 ... P79483 23091041
    228366 4h1l:G (3.3) BS01 peptide ? N/A L7MTK9 23091041
    228367 4h1l:H (3.3) BS01 peptide ? GO:0005886 ... L7MTL0 23091041
    228368 4h1l:I (3.3) BS01 peptide ? N/A L7MTK9 23091041
    228369 4h1l:J (3.3) BS01 peptide ? GO:0005886 ... L7MTL0 23091041
    228370 4h1m:A (1.99) BS01 0YJ 2.7.10.2 GO:0004672 ... Q14289 23153798 MOAD: ic50=78nM
    BindingDB: IC50=78nM
    228371 4h1n:A (2.99) BS01 HEM 1.14.14.1 GO:0004497 ... P00178 23296089
    228372 4h1n:A (2.99) BS02 CM5 1.14.14.1 GO:0004497 ... P00178 23296089
    228373 4h1n:A (2.99) BS03 CM5 1.14.14.1 GO:0004497 ... P00178 23296089
    228374 4h1n:A (2.99) BS04 CGE 1.14.14.1 GO:0004497 ... P00178 23296089
    228375 4h1p:A (2.3) BS01 EU 3.2.1.17 GO:0003796 ... P00698 23295480
    228376 4h1p:A (2.3) BS02 CL 3.2.1.17 GO:0003796 ... P00698 23295480
    228377 4h1p:A (2.3) BS03 CL 3.2.1.17 GO:0003796 ... P00698 23295480
    228378 4h1p:A (2.3) BS04 CL 3.2.1.17 GO:0003796 ... P00698 23295480
    228379 4h1q:A (1.59) BS01 ZN 3.4.24.35 GO:0004222 ... P14780 23567804
    228380 4h1q:A (1.59) BS02 ZN 3.4.24.35 GO:0004222 ... P14780 23567804
    228381 4h1q:A (1.59) BS03 CA 3.4.24.35 GO:0004222 ... P14780 23567804
    228382 4h1q:A (1.59) BS04 CA 3.4.24.35 GO:0004222 ... P14780 23567804
    228383 4h1q:A (1.59) BS05 CA 3.4.24.35 GO:0004222 ... P14780 23567804
    228384 4h1q:A (1.59) BS06 CA 3.4.24.35 GO:0004222 ... P14780 23567804
    228385 4h1q:A (1.59) BS07 0XX 3.4.24.35 GO:0004222 ... P14780 23567804
    228386 4h1q:A (1.59) BS08 0XX 3.4.24.35 GO:0004222 ... P14780 23567804
    228387 4h1q:B (1.59) BS01 0XX 3.4.24.35 GO:0004222 ... P14780 23567804
    228388 4h1q:B (1.59) BS02 ZN 3.4.24.35 GO:0004222 ... P14780 23567804
    228389 4h1q:B (1.59) BS03 ZN 3.4.24.35 GO:0004222 ... P14780 23567804
    228390 4h1q:B (1.59) BS04 CA 3.4.24.35 GO:0004222 ... P14780 23567804
    228391 4h1q:B (1.59) BS05 CA 3.4.24.35 GO:0004222 ... P14780 23567804
    228392 4h1q:B (1.59) BS06 CA 3.4.24.35 GO:0004222 ... P14780 23567804
    228393 4h1q:B (1.59) BS07 0XX 3.4.24.35 GO:0004222 ... P14780 23567804
    228394 4h1s:A (2.2) BS01 ZN 3.1.3.35
    3.1.3.5
    3.1.3.89
    3.1.3.91
    3.1.3.99
    GO:0000166 ... P21589 22997138
    228395 4h1s:A (2.2) BS02 ZN 3.1.3.35
    3.1.3.5
    3.1.3.89
    3.1.3.91
    3.1.3.99
    GO:0000166 ... P21589 22997138
    228396 4h1s:A (2.2) BS03 PO4 3.1.3.35
    3.1.3.5
    3.1.3.89
    3.1.3.91
    3.1.3.99
    GO:0000166 ... P21589 22997138
    228397 4h1s:B (2.2) BS01 ZN 3.1.3.35
    3.1.3.5
    3.1.3.89
    3.1.3.91
    3.1.3.99
    GO:0000166 ... P21589 22997138
    228398 4h1s:B (2.2) BS02 ZN 3.1.3.35
    3.1.3.5
    3.1.3.89
    3.1.3.91
    3.1.3.99
    GO:0000166 ... P21589 22997138
    228399 4h1s:B (2.2) BS03 PO4 3.1.3.35
    3.1.3.5
    3.1.3.89
    3.1.3.91
    3.1.3.99
    GO:0000166 ... P21589 22997138
    228400 4h1v:A (2.3) BS01 GNP 3.6.5.5 GO:0003924 ... O00429 23977156

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).