SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    229001 4h8a:B (1.64) BS02 NAI 1.1.1.350 GO:0000256 ... P77555 23284870
    229002 4h8e:A (1.3) BS01 FPP 2.5.1.- GO:0000287 ... P60477 23248302
    229003 4h8g:F (1.699) BS01 peptide N/A N/A N/A N/A
    229004 4h8g:H (1.699) BS01 peptide N/A N/A N/A N/A
    229005 4h8h:A (2.0) BS01 CA 5.4.11.99 GO:0004553 ... M1E1F6 N/A
    229006 4h8h:B (2.0) BS01 CA 5.4.11.99 GO:0004553 ... M1E1F6 N/A
    229007 4h8i:A (2.0) BS01 11W ? GO:0015276 ... P42260 24295282
    229008 4h8k:A (2.3) BS01 rna 3.1.26.4 GO:0003676 ... E0X767 23500886
    229009 4h8k:A (2.3) BS02 dna 3.1.26.4 GO:0003676 ... E0X767 23500886
    229010 4h8k:B (2.3) BS01 rna 3.1.26.4 GO:0003676 ... E0X767 23500886
    229011 4h8k:B (2.3) BS02 dna 3.1.26.4 GO:0003676 ... E0X767 23500886
    229012 4h8m:A (1.4292) BS01 peptide N/A N/A N/A N/A
    229013 4h8n:A (1.8) BS01 NDP 1.1.1.-
    1.1.1.358
    GO:0005575 ... Q76L36 23828603
    229014 4h8n:A (1.8) BS02 NDP 1.1.1.-
    1.1.1.358
    GO:0005575 ... Q76L36 23828603
    229015 4h8n:B (1.8) BS01 NDP 1.1.1.-
    1.1.1.358
    GO:0005575 ... Q76L36 23828603
    229016 4h8n:B (1.8) BS02 NDP 1.1.1.-
    1.1.1.358
    GO:0005575 ... Q76L36 23828603
    229017 4h8p:A (2.05) BS01 HEM ? N/A A0A6L8PXZ2 23364793
    229018 4h8q:A (1.7) BS01 HEM ? N/A A0A6L8PXZ2 23364793
    229019 4h8r:A (1.25) BS01 IM2 3.5.2.6 GO:0008800 ... Q09HD0 23148776
    229020 4h8r:B (1.25) BS01 IM2 3.5.2.6 GO:0008800 ... Q09HD0 23148776
    229021 4h8u:A (2.0) BS01 GLC 5.4.11.99 GO:0004553 ... M1E1F6 N/A
    229022 4h8u:A (2.0) BS02 FRU 5.4.11.99 GO:0004553 ... M1E1F6 N/A
    229023 4h8u:A (2.0) BS03 CA 5.4.11.99 GO:0004553 ... M1E1F6 N/A
    229024 4h8u:B (2.0) BS01 TEU 5.4.11.99 GO:0004553 ... M1E1F6 N/A
    229025 4h8u:B (2.0) BS02 CA 5.4.11.99 GO:0004553 ... M1E1F6 N/A
    229026 4h8v:A (1.95) BS01 CA 5.4.11.99 GO:0004553 ... M1E1F6 N/A
    229027 4h8v:A (1.95) BS02 TEU 5.4.11.99 GO:0004553 ... M1E1F6 N/A
    229028 4h8v:B (1.95) BS01 CA 5.4.11.99 GO:0004553 ... M1E1F6 N/A
    229029 4h8v:B (1.95) BS02 TEU 5.4.11.99 GO:0004553 ... M1E1F6 N/A
    229030 4h95:A (2.6) BS01 NDP 1.5.1.3 GO:0004146 ... P22906 23375226
    229031 4h95:A (2.6) BS02 06U 1.5.1.3 GO:0004146 ... P22906 23375226 BindingDB: IC50=60nM
    229032 4h95:B (2.6) BS01 NDP 1.5.1.3 GO:0004146 ... P22906 23375226
    229033 4h95:B (2.6) BS02 06U 1.5.1.3 GO:0004146 ... P22906 23375226 BindingDB: IC50=60nM
    229034 4h96:A (2.6) BS01 NDP 1.5.1.3 GO:0004146 ... P22906 23375226
    229035 4h96:A (2.6) BS02 14Q 1.5.1.3 GO:0004146 ... P22906 23375226
    229036 4h96:B (2.6) BS01 NDP 1.5.1.3 GO:0004146 ... P22906 23375226
    229037 4h96:B (2.6) BS02 14Q 1.5.1.3 GO:0004146 ... P22906 23375226
    229038 4h97:A (2.2) BS01 NDP 1.5.1.3 GO:0004146 ... P22906 23375226
    229039 4h97:A (2.2) BS02 53S 1.5.1.3 GO:0004146 ... P22906 23375226 MOAD: ic50=22nM
    BindingDB: IC50=22nM
    229040 4h97:B (2.2) BS01 NDP 1.5.1.3 GO:0004146 ... P22906 23375226
    229041 4h97:B (2.2) BS02 53S 1.5.1.3 GO:0004146 ... P22906 23375226 MOAD: ic50=22nM
    BindingDB: IC50=22nM
    229042 4h98:A (2.9) BS01 NDP 1.5.1.3 GO:0004146 ... Q6FPH0 23375226
    229043 4h98:A (2.9) BS02 14Q 1.5.1.3 GO:0004146 ... Q6FPH0 23375226
    229044 4h98:B (2.9) BS01 NDP 1.5.1.3 GO:0004146 ... Q6FPH0 23375226
    229045 4h98:B (2.9) BS02 14Q 1.5.1.3 GO:0004146 ... Q6FPH0 23375226
    229046 4h99:L (2.97) BS01 BCL ? GO:0009772 ... P0C0Y8 N/A
    229047 4h99:L (2.97) BS02 BCL ? GO:0009772 ... P0C0Y8 N/A
    229048 4h99:L (2.97) BS03 BPH ? GO:0009772 ... P0C0Y8 N/A
    229049 4h99:L (2.97) BS04 U10 ? GO:0009772 ... P0C0Y8 N/A
    229050 4h99:L (2.97) BS05 BCL ? GO:0009772 ... P0C0Y8 N/A
    229051 4h99:L (2.97) BS06 FE ? GO:0009772 ... P0C0Y8 N/A
    229052 4h99:L (2.97) BS07 BPH ? GO:0009772 ... P0C0Y8 N/A
    229053 4h99:M (2.97) BS01 BCL ? GO:0009772 ... P0C0Y9 N/A
    229054 4h99:M (2.97) BS02 BPH ? GO:0009772 ... P0C0Y9 N/A
    229055 4h99:M (2.97) BS03 BCL ? GO:0009772 ... P0C0Y9 N/A
    229056 4h99:M (2.97) BS04 FE ? GO:0009772 ... P0C0Y9 N/A
    229057 4h99:M (2.97) BS05 BCL ? GO:0009772 ... P0C0Y9 N/A
    229058 4h99:M (2.97) BS06 BPH ? GO:0009772 ... P0C0Y9 N/A
    229059 4h99:M (2.97) BS07 U10 ? GO:0009772 ... P0C0Y9 N/A
    229060 4h99:M (2.97) BS08 SPO ? GO:0009772 ... P0C0Y9 N/A
    229061 4h9d:A (2.599) BS01 ZN ? GO:0003676 ... Q39X46 N/A
    229062 4h9d:B (2.599) BS01 ZN ? GO:0003676 ... Q39X46 N/A
    229063 4h9d:B (2.599) BS02 MG ? GO:0003676 ... Q39X46 N/A
    229064 4h9d:C (2.599) BS01 ZN ? GO:0003676 ... Q39X46 N/A
    229065 4h9g:A (1.93) BS01 GNP 3.6.5.3 GO:0000287 ... P60338 23989163
    229066 4h9g:A (1.93) BS02 MG 3.6.5.3 GO:0000287 ... P60338 23989163
    229067 4h9g:A (1.93) BS03 14J 3.6.5.3 GO:0000287 ... P60338 23989163
    229068 4h9k:A (1.599) BS01 ZN 3.4.21.113
    3.6.1.15
    3.6.4.13
    GO:0016032 ... Q68871 24146623
    229069 4h9l:L (2.77) BS01 BCL ? GO:0009772 ... P0C0Y8 N/A
    229070 4h9l:L (2.77) BS02 BCL ? GO:0009772 ... P0C0Y8 N/A
    229071 4h9l:L (2.77) BS03 BPH ? GO:0009772 ... P0C0Y8 N/A
    229072 4h9l:L (2.77) BS04 U10 ? GO:0009772 ... P0C0Y8 N/A
    229073 4h9l:L (2.77) BS05 BCL ? GO:0009772 ... P0C0Y8 N/A
    229074 4h9l:L (2.77) BS06 FE ? GO:0009772 ... P0C0Y8 N/A
    229075 4h9l:L (2.77) BS07 BPH ? GO:0009772 ... P0C0Y8 N/A
    229076 4h9l:M (2.77) BS01 BCL ? GO:0009772 ... P0C0Y9 N/A
    229077 4h9l:M (2.77) BS02 BPH ? GO:0009772 ... P0C0Y9 N/A
    229078 4h9l:M (2.77) BS03 BCL ? GO:0009772 ... P0C0Y9 N/A
    229079 4h9l:M (2.77) BS04 FE ? GO:0009772 ... P0C0Y9 N/A
    229080 4h9l:M (2.77) BS05 BCL ? GO:0009772 ... P0C0Y9 N/A
    229081 4h9l:M (2.77) BS06 BPH ? GO:0009772 ... P0C0Y9 N/A
    229082 4h9l:M (2.77) BS07 U10 ? GO:0009772 ... P0C0Y9 N/A
    229083 4h9l:M (2.77) BS08 SPO ? GO:0009772 ... P0C0Y9 N/A
    229084 4h9t:A (2.097) BS01 FE 3.5.-.- GO:0008270 ... Q5KZU5 23461395
    229085 4h9t:A (2.097) BS02 MN 3.5.-.- GO:0008270 ... Q5KZU5 23461395
    229086 4h9t:A (2.097) BS03 HL4 3.5.-.- GO:0008270 ... Q5KZU5 23461395
    229087 4h9t:B (2.097) BS01 FE 3.5.-.- GO:0008270 ... Q5KZU5 23461395
    229088 4h9t:B (2.097) BS02 MN 3.5.-.- GO:0008270 ... Q5KZU5 23461395
    229089 4h9t:B (2.097) BS03 HL4 3.5.-.- GO:0008270 ... Q5KZU5 23461395
    229090 4h9u:A (2.099) BS01 FE 3.5.-.- GO:0008270 ... Q5KZU5 23461395
    229091 4h9u:A (2.099) BS02 ZN 3.5.-.- GO:0008270 ... Q5KZU5 23461395
    229092 4h9u:B (2.099) BS01 FE 3.5.-.- GO:0008270 ... Q5KZU5 23461395
    229093 4h9u:B (2.099) BS02 ZN 3.5.-.- GO:0008270 ... Q5KZU5 23461395
    229094 4h9v:A (1.971) BS01 FE 3.5.-.- GO:0008270 ... Q5KZU5 23461395
    229095 4h9v:A (1.971) BS02 ZN 3.5.-.- GO:0008270 ... Q5KZU5 23461395
    229096 4h9v:B (1.971) BS01 FE 3.5.-.- GO:0008270 ... Q5KZU5 23461395
    229097 4h9v:B (1.971) BS02 ZN 3.5.-.- GO:0008270 ... Q5KZU5 23461395
    229098 4h9x:A (2.201) BS01 FE 3.5.-.- GO:0008270 ... Q5KZU5 23461395
    229099 4h9x:A (2.201) BS02 ZN 3.5.-.- GO:0008270 ... Q5KZU5 23461395
    229100 4h9x:A (2.201) BS03 HL4 3.5.-.- GO:0008270 ... Q5KZU5 23461395
    229101 4h9x:B (2.201) BS01 FE 3.5.-.- GO:0008270 ... Q5KZU5 23461395
    229102 4h9x:B (2.201) BS02 ZN 3.5.-.- GO:0008270 ... Q5KZU5 23461395
    229103 4h9x:B (2.201) BS03 HL4 3.5.-.- GO:0008270 ... Q5KZU5 23461395
    229104 4h9y:A (2.085) BS01 FE 3.5.-.- GO:0008270 ... Q5KZU5 23461395
    229105 4h9y:A (2.085) BS02 ZN 3.5.-.- GO:0008270 ... Q5KZU5 23461395
    229106 4h9y:B (2.085) BS01 FE 3.5.-.- GO:0008270 ... Q5KZU5 23461395
    229107 4h9y:B (2.085) BS02 ZN 3.5.-.- GO:0008270 ... Q5KZU5 23461395
    229108 4h9z:A (2.6) BS01 FE 3.5.-.- GO:0008270 ... Q5KZU5 23461395
    229109 4h9z:A (2.6) BS02 MN 3.5.-.- GO:0008270 ... Q5KZU5 23461395
    229110 4h9z:B (2.6) BS01 FE 3.5.-.- GO:0008270 ... Q5KZU5 23461395
    229111 4h9z:B (2.6) BS02 MN 3.5.-.- GO:0008270 ... Q5KZU5 23461395
    229112 4ha0:A (1.902) BS01 FE 3.5.-.- GO:0008270 ... Q5KZU5 23461395
    229113 4ha0:A (1.902) BS02 ZN 3.5.-.- GO:0008270 ... Q5KZU5 23461395
    229114 4ha0:B (1.902) BS01 FE 3.5.-.- GO:0008270 ... Q5KZU5 23461395
    229115 4ha0:B (1.902) BS02 ZN 3.5.-.- GO:0008270 ... Q5KZU5 23461395
    229116 4ha1:A (2.2) BS01 CA 5.4.11.99 GO:0004553 ... M1E1F6 N/A
    229117 4ha1:A (2.2) BS02 ISL 5.4.11.99 GO:0004553 ... M1E1F6 N/A
    229118 4ha1:B (2.2) BS01 CA 5.4.11.99 GO:0004553 ... M1E1F6 N/A
    229119 4ha1:B (2.2) BS02 GLC 5.4.11.99 GO:0004553 ... M1E1F6 N/A
    229120 4ha3:A (1.46) BS01 GOL 3.2.1.23 GO:0004553 ... D9PZ08 23657657
    229121 4ha3:A (1.46) BS02 GOL 3.2.1.23 GO:0004553 ... D9PZ08 23657657
    229122 4ha3:A (1.46) BS03 GOL 3.2.1.23 GO:0004553 ... D9PZ08 23657657
    229123 4ha3:A (1.46) BS04 GOL 3.2.1.23 GO:0004553 ... D9PZ08 23657657
    229124 4ha4:A (1.37) BS01 GOL 3.2.1.23 GO:0004553 ... D9PZ08 23657657
    229125 4ha4:A (1.37) BS02 GOL 3.2.1.23 GO:0004553 ... D9PZ08 23657657
    229126 4ha4:A (1.37) BS03 GOL 3.2.1.23 GO:0004553 ... D9PZ08 23657657
    229127 4ha5:A (1.83) BS01 13W 3.4.23.46 GO:0004190 ... P56817 22989333 MOAD: Ki=56nM
    229128 4ha5:B (1.83) BS01 13W 3.4.23.46 GO:0004190 ... P56817 22989333 MOAD: Ki=56nM
    229129 4ha6:A (2.095) BS01 FAD 1.1.3.12 GO:0016491 ... Q5NT46 23501672
    229130 4ha6:A (2.095) BS02 PXM 1.1.3.12 GO:0016491 ... Q5NT46 23501672
    229131 4ha8:A (2.65) BS01 BC4 N/A GO:0004077 ... N/A N/A
    229132 4ha9:A (2.35) BS01 NDP 1.1.1.302 GO:0008703 ... P33312 23620735 MOAD: Ka=15000M^-1
    229133 4hab:A (2.65) BS01 peptide 2.7.11.21 N/A P53350 23498919
    229134 4hab:A (2.65) BS02 peptide 2.7.11.21 N/A P53350 23498919
    229135 4hab:B (2.65) BS01 peptide 2.7.11.21 N/A P53350 23498919
    229136 4hab:C (2.65) BS01 peptide 2.7.11.21 N/A P53350 23498919
    229137 4hac:A (1.92) BS01 MG 2.7.1.36 GO:0000287 ... Q8PW39 23192048
    229138 4hac:B (1.92) BS01 MG 2.7.1.36 GO:0000287 ... Q8PW39 23192048
    229139 4haf:A (2.04) BS01 BMA ? N/A P01859 23628091
    229140 4hag:A (3.4) BS01 BMA ? N/A P01859 23628091
    229141 4hai:A (2.55) BS01 MG 3.1.3.76
    3.3.2.10
    GO:0000287 ... P34913 23237835
    229142 4hai:A (2.55) BS02 I23 3.1.3.76
    3.3.2.10
    GO:0000287 ... P34913 23237835 BindingDB: IC50=7.9nM
    229143 4haj:A (1.9) BS01 HEC ? GO:0009055 ... Q8GGK7 N/A
    229144 4haj:A (1.9) BS02 HEC ? GO:0009055 ... Q8GGK7 N/A
    229145 4haj:A (1.9) BS03 HEC ? GO:0009055 ... Q8GGK7 N/A
    229146 4haj:A (1.9) BS04 DXC ? GO:0009055 ... Q8GGK7 N/A
    229147 4hak:A (1.4) BS01 CU 1.16.3.4 GO:0004322 ... P36649 N/A
    229148 4hak:A (1.4) BS02 CU 1.16.3.4 GO:0004322 ... P36649 N/A
    229149 4hak:A (1.4) BS03 CU 1.16.3.4 GO:0004322 ... P36649 N/A
    229150 4hak:A (1.4) BS04 CU 1.16.3.4 GO:0004322 ... P36649 N/A
    229151 4hal:A (1.4) BS01 CU 1.16.3.4 GO:0004322 ... P36649 N/A
    229152 4hal:A (1.4) BS02 CU 1.16.3.4 GO:0004322 ... P36649 N/A
    229153 4hal:A (1.4) BS03 CU 1.16.3.4 GO:0004322 ... P36649 N/A
    229154 4hal:A (1.4) BS04 CU 1.16.3.4 GO:0004322 ... P36649 N/A
    229155 4han:A (2.551) BS01 peptide ? GO:0030246 ... O00214 23511477
    229156 4han:A (2.551) BS02 NAD ? GO:0030246 ... O00214 23511477
    229157 4han:B (2.551) BS01 peptide ? GO:0030246 ... O00214 23511477
    229158 4han:B (2.551) BS02 NAD ? GO:0030246 ... O00214 23511477
    229159 4hap:A (1.6) BS01 BGC 3.2.1.91 GO:0004553 ... D4HRL0 23733951
    229160 4hap:A (1.6) BS02 BGC 3.2.1.91 GO:0004553 ... D4HRL0 23733951
    229161 4hap:A (1.6) BS03 CA 3.2.1.91 GO:0004553 ... D4HRL0 23733951
    229162 4hap:B (1.6) BS01 BGC 3.2.1.91 GO:0004553 ... D4HRL0 23733951
    229163 4hap:B (1.6) BS02 BGC 3.2.1.91 GO:0004553 ... D4HRL0 23733951
    229164 4haq:A (1.9) BS01 BGC 3.2.1.91 GO:0004553 ... D4HRL0 23733951
    229165 4haq:A (1.9) BS02 BGC 3.2.1.91 GO:0004553 ... D4HRL0 23733951
    229166 4haq:B (1.9) BS01 BGC 3.2.1.91 GO:0004553 ... D4HRL0 23733951
    229167 4haq:B (1.9) BS02 BGC 3.2.1.91 GO:0004553 ... D4HRL0 23733951
    229168 4haq:B (1.9) BS03 GLC 3.2.1.91 GO:0004553 ... D4HRL0 23733951
    229169 4haq:B (1.9) BS04 CA 3.2.1.91 GO:0004553 ... D4HRL0 23733951
    229170 4haq:B (1.9) BS05 CA 3.2.1.91 GO:0004553 ... D4HRL0 23733951
    229171 4hat:A (1.78) BS01 GNP 3.6.5.- GO:0000054 ... P62826 23297231
    229172 4hat:A (1.78) BS02 MG 3.6.5.- GO:0000054 ... P62826 23297231
    229173 4hat:C (1.78) BS01 LMB ? GO:0000055 ... P30822 23297231
    229174 4hau:A (2.0) BS01 GNP 3.6.5.- GO:0000054 ... P62826 23297231
    229175 4hau:A (2.0) BS02 MG 3.6.5.- GO:0000054 ... P62826 23297231
    229176 4hau:C (2.0) BS01 RJA ? GO:0000055 ... P30822 23297231
    229177 4hav:A (2.0) BS01 GNP 3.6.5.- GO:0000054 ... P62826 23297231
    229178 4hav:A (2.0) BS02 MG 3.6.5.- GO:0000054 ... P62826 23297231
    229179 4hav:C (2.0) BS01 AA8 ? GO:0000055 ... P30822 23297231
    229180 4haw:A (1.9) BS01 GNP 3.6.5.- GO:0000054 ... P62826 23297231
    229181 4haw:A (1.9) BS02 MG 3.6.5.- GO:0000054 ... P62826 23297231
    229182 4haw:C (1.9) BS01 LMB ? GO:0000055 ... P30822 23297231
    229183 4hax:A (2.28) BS01 GNP 3.6.5.- GO:0000054 ... P62826 23297231
    229184 4hax:A (2.28) BS02 MG 3.6.5.- GO:0000054 ... P62826 23297231
    229185 4hax:C (2.28) BS01 RJA ? GO:0000055 ... P30822 23297231
    229186 4hay:A (2.3) BS01 GNP 3.6.5.- GO:0000054 ... P62826 23297231
    229187 4hay:A (2.3) BS02 MG 3.6.5.- GO:0000054 ... P62826 23297231
    229188 4hay:C (2.3) BS01 LMB ? GO:0000055 ... P30822 23297231
    229189 4haz:A (1.9) BS01 GNP 3.6.5.- GO:0000054 ... P62826 23297231
    229190 4haz:A (1.9) BS02 MG 3.6.5.- GO:0000054 ... P62826 23297231
    229191 4haz:C (1.9) BS01 LBF ? GO:0000055 ... P30822 23297231
    229192 4hb0:A (2.2) BS01 GNP 3.6.5.- GO:0000054 ... P62826 23297231
    229193 4hb0:A (2.2) BS02 MG 3.6.5.- GO:0000054 ... P62826 23297231
    229194 4hb0:C (2.2) BS01 LBF ? GO:0000055 ... P30822 23297231
    229195 4hb2:A (1.8) BS01 GNP 3.6.5.- GO:0000054 ... P62826 23297231
    229196 4hb2:A (1.8) BS02 MG 3.6.5.- GO:0000054 ... P62826 23297231
    229197 4hb3:A (2.8) BS01 GNP 3.6.5.- GO:0000054 ... P62826 23297231
    229198 4hb3:A (2.8) BS02 MG 3.6.5.- GO:0000054 ... P62826 23297231
    229199 4hb4:A (2.05) BS01 GNP 3.6.5.- GO:0000054 ... P62826 23297231
    229200 4hb4:A (2.05) BS02 MG 3.6.5.- GO:0000054 ... P62826 23297231

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).