SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    22801 1ir2:C (1.84) BS03 CAP 4.1.1.39 GO:0000287 ... P00877 11866526
    22802 1ir2:D (1.84) BS01 MG 4.1.1.39 GO:0000287 ... P00877 11866526
    22803 1ir2:D (1.84) BS02 CAP 4.1.1.39 GO:0000287 ... P00877 11866526
    22804 1ir2:D (1.84) BS03 CAP 4.1.1.39 GO:0000287 ... P00877 11866526
    22805 1ir2:E (1.84) BS01 CAP 4.1.1.39 GO:0000287 ... P00877 11866526
    22806 1ir2:E (1.84) BS02 MG 4.1.1.39 GO:0000287 ... P00877 11866526
    22807 1ir2:E (1.84) BS03 CAP 4.1.1.39 GO:0000287 ... P00877 11866526
    22808 1ir2:F (1.84) BS01 CAP 4.1.1.39 GO:0000287 ... P00877 11866526
    22809 1ir2:F (1.84) BS02 MG 4.1.1.39 GO:0000287 ... P00877 11866526
    22810 1ir2:F (1.84) BS03 CAP 4.1.1.39 GO:0000287 ... P00877 11866526
    22811 1ir2:G (1.84) BS01 CAP 4.1.1.39 GO:0000287 ... P00877 11866526
    22812 1ir2:G (1.84) BS02 MG 4.1.1.39 GO:0000287 ... P00877 11866526
    22813 1ir2:G (1.84) BS03 CAP 4.1.1.39 GO:0000287 ... P00877 11866526
    22814 1ir2:H (1.84) BS01 CAP 4.1.1.39 GO:0000287 ... P00877 11866526
    22815 1ir2:H (1.84) BS02 MG 4.1.1.39 GO:0000287 ... P00877 11866526
    22816 1ir2:H (1.84) BS03 CAP 4.1.1.39 GO:0000287 ... P00877 11866526
    22817 1ir2:S (1.84) BS01 MG 4.1.1.39 GO:0000287 ... P00877 11866526
    22818 1ir2:S (1.84) BS02 CAP 4.1.1.39 GO:0000287 ... P00877 11866526
    22819 1ir2:S (1.84) BS03 CAP 4.1.1.39 GO:0000287 ... P00877 11866526
    22820 1ir2:T (1.84) BS01 MG 4.1.1.39 GO:0000287 ... P00877 11866526
    22821 1ir2:T (1.84) BS02 CAP 4.1.1.39 GO:0000287 ... P00877 11866526
    22822 1ir2:T (1.84) BS03 CAP 4.1.1.39 GO:0000287 ... P00877 11866526
    22823 1ir2:U (1.84) BS01 MG 4.1.1.39 GO:0000287 ... P00877 11866526
    22824 1ir2:U (1.84) BS02 CAP 4.1.1.39 GO:0000287 ... P00877 11866526
    22825 1ir2:U (1.84) BS03 CAP 4.1.1.39 GO:0000287 ... P00877 11866526
    22826 1ir2:V (1.84) BS01 MG 4.1.1.39 GO:0000287 ... P00877 11866526
    22827 1ir2:V (1.84) BS02 CAP 4.1.1.39 GO:0000287 ... P00877 11866526
    22828 1ir2:V (1.84) BS03 CAP 4.1.1.39 GO:0000287 ... P00877 11866526
    22829 1ir2:W (1.84) BS01 CAP 4.1.1.39 GO:0000287 ... P00877 11866526
    22830 1ir2:W (1.84) BS02 MG 4.1.1.39 GO:0000287 ... P00877 11866526
    22831 1ir2:W (1.84) BS03 CAP 4.1.1.39 GO:0000287 ... P00877 11866526
    22832 1ir2:X (1.84) BS01 CAP 4.1.1.39 GO:0000287 ... P00877 11866526
    22833 1ir2:X (1.84) BS02 MG 4.1.1.39 GO:0000287 ... P00877 11866526
    22834 1ir2:X (1.84) BS03 CAP 4.1.1.39 GO:0000287 ... P00877 11866526
    22835 1ir2:Y (1.84) BS01 CAP 4.1.1.39 GO:0000287 ... P00877 11866526
    22836 1ir2:Y (1.84) BS02 MG 4.1.1.39 GO:0000287 ... P00877 11866526
    22837 1ir2:Y (1.84) BS03 CAP 4.1.1.39 GO:0000287 ... P00877 11866526
    22838 1ir2:Z (1.84) BS01 CAP 4.1.1.39 GO:0000287 ... P00877 11866526
    22839 1ir2:Z (1.84) BS02 MG 4.1.1.39 GO:0000287 ... P00877 11866526
    22840 1ir2:Z (1.84) BS03 CAP 4.1.1.39 GO:0000287 ... P00877 11866526
    22841 1ir3:A (1.9) BS01 peptide 2.7.10.1 GO:0004672 ... P06213 9312016
    22842 1ir3:A (1.9) BS02 MG 2.7.10.1 GO:0004672 ... P06213 9312016
    22843 1ir3:A (1.9) BS03 ANP 2.7.10.1 GO:0004672 ... P06213 9312016
    22844 1ir6:A (2.9) BS01 MN 3.1.-.- GO:0003676 ... Q5SJ47 11972066
    22845 1irb:A (1.9) BS01 CA 3.1.1.4 GO:0002227 ... P00593 8810924
    22846 1irc:A (2.17) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 8204590
    22847 1irc:A (2.17) BS02 IMD 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 8204590
    22848 1ird:A (1.25) BS01 HEM ? GO:0004601 ... P69905 N/A
    22849 1ird:B (1.25) BS01 HEM ? GO:0004601 ... P68871 N/A
    22850 1ire:A (1.8) BS01 CO 4.2.1.84 GO:0003824 ... Q7SID2 11700034
    22851 1iri:A (2.4) BS01 E4P 5.3.1.9 GO:0002639 ... P06744 12054796
    22852 1iri:B (2.4) BS01 E4P 5.3.1.9 GO:0002639 ... P06744 12054796
    22853 1iri:C (2.4) BS01 E4P 5.3.1.9 GO:0002639 ... P06744 12054796
    22854 1iri:D (2.4) BS01 E4P 5.3.1.9 GO:0002639 ... P06744 12054796
    22855 1irj:A (2.1) BS01 CA ? GO:0002523 ... P06702 11851337
    22856 1irj:A (2.1) BS02 CA ? GO:0002523 ... P06702 11851337
    22857 1irj:B (2.1) BS01 CA ? GO:0002523 ... P06702 11851337
    22858 1irj:B (2.1) BS02 CA ? GO:0002523 ... P06702 11851337
    22859 1irj:B (2.1) BS03 CPS ? GO:0002523 ... P06702 11851337
    22860 1irj:C (2.1) BS01 CA ? GO:0002523 ... P06702 11851337
    22861 1irj:C (2.1) BS02 CA ? GO:0002523 ... P06702 11851337
    22862 1irj:D (2.1) BS01 CA ? GO:0002523 ... P06702 11851337
    22863 1irj:D (2.1) BS02 CA ? GO:0002523 ... P06702 11851337
    22864 1irj:D (2.1) BS03 CPS ? GO:0002523 ... P06702 11851337
    22865 1irj:E (2.1) BS01 CPS ? GO:0002523 ... P06702 11851337
    22866 1irj:E (2.1) BS02 CA ? GO:0002523 ... P06702 11851337
    22867 1irj:E (2.1) BS03 CA ? GO:0002523 ... P06702 11851337
    22868 1irj:F (2.1) BS01 CA ? GO:0002523 ... P06702 11851337
    22869 1irj:F (2.1) BS02 CA ? GO:0002523 ... P06702 11851337
    22870 1irj:G (2.1) BS01 CA ? GO:0002523 ... P06702 11851337
    22871 1irj:G (2.1) BS02 CA ? GO:0002523 ... P06702 11851337
    22872 1irj:G (2.1) BS03 CPS ? GO:0002523 ... P06702 11851337
    22873 1irj:H (2.1) BS01 CA ? GO:0002523 ... P06702 11851337
    22874 1irj:H (2.1) BS02 CA ? GO:0002523 ... P06702 11851337
    22875 1irn:A (1.2) BS01 ZN ? GO:0005506 ... P00268 8799113
    22876 1iro:A (1.1) BS01 FE ? GO:0005506 ... P00268 8799113
    22877 1irs:A (-1.00) BS01 peptide ? GO:0005158 ... P35568 8599766
    22878 1iru:1 (2.75) BS01 MG ? GO:0005839 ... Q2TBX6 12015144
    22879 1iru:1 (2.75) BS02 MG ? GO:0005839 ... Q2TBX6 12015144
    22880 1iru:A (2.75) BS01 MG ? GO:0000932 ... Q2YDE4 12015144
    22881 1iru:B (2.75) BS01 MG ? GO:0000932 ... Q3T0Y5 12015144
    22882 1iru:C (2.75) BS01 MG ? GO:0000932 ... Q3ZCK9 12015144
    22883 1iru:D (2.75) BS01 MG ? GO:0005634 ... Q3ZBG0 12015144
    22884 1iru:G (2.75) BS01 MG ? GO:0005634 ... Q58DU5 12015144
    22885 1iru:G (2.75) BS02 MG ? GO:0005634 ... Q58DU5 12015144
    22886 1iru:I (2.75) BS01 MG 3.4.25.1 GO:0004298 ... Q2TBP0 12015144
    22887 1iru:J (2.75) BS01 MG ? GO:0005634 ... P33672 12015144
    22888 1iru:J (2.75) BS02 MG ? GO:0005634 ... P33672 12015144
    22889 1iru:K (2.75) BS01 MG ? GO:0000502 ... Q5E9K0 12015144
    22890 1iru:L (2.75) BS01 MG 3.4.25.1 GO:0004298 ... Q32KL2 12015144
    22891 1iru:M (2.75) BS01 MG ? GO:0005839 ... Q2TBX6 12015144
    22892 1iru:M (2.75) BS02 MG ? GO:0005839 ... Q2TBX6 12015144
    22893 1iru:O (2.75) BS01 MG ? GO:0000932 ... Q2YDE4 12015144
    22894 1iru:P (2.75) BS01 MG ? GO:0000932 ... Q3T0Y5 12015144
    22895 1iru:Q (2.75) BS01 MG ? GO:0000932 ... Q3ZCK9 12015144
    22896 1iru:R (2.75) BS01 MG ? GO:0005634 ... Q3ZBG0 12015144
    22897 1iru:U (2.75) BS01 MG ? GO:0005634 ... Q58DU5 12015144
    22898 1iru:U (2.75) BS02 MG ? GO:0005634 ... Q58DU5 12015144
    22899 1iru:W (2.75) BS01 MG 3.4.25.1 GO:0004298 ... Q2TBP0 12015144
    22900 1iru:X (2.75) BS01 MG ? GO:0005634 ... P33672 12015144
    22901 1iru:X (2.75) BS02 MG ? GO:0005634 ... P33672 12015144
    22902 1iru:Y (2.75) BS01 MG ? GO:0000502 ... Q5E9K0 12015144
    22903 1iru:Z (2.75) BS01 MG 3.4.25.1 GO:0004298 ... Q32KL2 12015144
    22904 1irv:A (1.9) BS01 HEM ? GO:0005515 ... P00044 8718869
    22905 1irw:A (2.0) BS01 HEM ? GO:0005515 ... P00044 8718869
    22906 1irx:A (2.6) BS01 ZN 6.1.1.6 GO:0000049 ... O57963 11887185
    22907 1irx:A (2.6) BS02 ZN 6.1.1.6 GO:0000049 ... O57963 11887185
    22908 1irx:B (2.6) BS01 ZN 6.1.1.6 GO:0000049 ... O57963 11887185
    22909 1is0:A (1.9) BS01 peptide 2.7.10.2 N/A P00524 11782172
    22910 1is0:B (1.9) BS01 peptide 2.7.10.2 N/A P00524 11782172
    22911 1is2:A (2.2) BS01 FAD 1.3.3.6 GO:0000038 ... P07872 11872165
    22912 1is2:A (2.2) BS02 FAD 1.3.3.6 GO:0000038 ... P07872 11872165
    22913 1is2:B (2.2) BS01 FAD 1.3.3.6 GO:0000038 ... P07872 11872165
    22914 1is2:B (2.2) BS02 FAD 1.3.3.6 GO:0000038 ... P07872 11872165
    22915 1is3:A (1.45) BS01 BGC ? GO:0005615 ... Q9YIC2 12206768
    22916 1is3:A (1.45) BS02 GAL ? GO:0005615 ... Q9YIC2 12206768
    22917 1is4:A (1.9) BS01 BGC ? GO:0005615 ... Q9YIC2 12206768
    22918 1is4:A (1.9) BS02 GAL ? GO:0005615 ... Q9YIC2 12206768
    22919 1is7:K (2.8) BS01 PHE ? GO:0005515 ... P70552 11818540
    22920 1is7:K (2.8) BS02 PHE ? GO:0005515 ... P70552 11818540
    22921 1is7:L (2.8) BS01 PHE ? GO:0005515 ... P70552 11818540
    22922 1is7:L (2.8) BS02 PHE ? GO:0005515 ... P70552 11818540
    22923 1is7:M (2.8) BS01 PHE ? GO:0005515 ... P70552 11818540
    22924 1is7:M (2.8) BS02 PHE ? GO:0005515 ... P70552 11818540
    22925 1is7:N (2.8) BS01 PHE ? GO:0005515 ... P70552 11818540
    22926 1is7:N (2.8) BS02 PHE ? GO:0005515 ... P70552 11818540
    22927 1is7:O (2.8) BS01 PHE ? GO:0005515 ... P70552 11818540
    22928 1is7:O (2.8) BS02 PHE ? GO:0005515 ... P70552 11818540
    22929 1is7:P (2.8) BS01 PHE ? GO:0005515 ... P70552 11818540
    22930 1is7:P (2.8) BS02 PHE ? GO:0005515 ... P70552 11818540
    22931 1is7:Q (2.8) BS01 PHE ? GO:0005515 ... P70552 11818540
    22932 1is7:Q (2.8) BS02 PHE ? GO:0005515 ... P70552 11818540
    22933 1is7:R (2.8) BS01 PHE ? GO:0005515 ... P70552 11818540
    22934 1is7:R (2.8) BS02 PHE ? GO:0005515 ... P70552 11818540
    22935 1is7:S (2.8) BS01 PHE ? GO:0005515 ... P70552 11818540
    22936 1is7:S (2.8) BS02 PHE ? GO:0005515 ... P70552 11818540
    22937 1is7:T (2.8) BS01 PHE ? GO:0005515 ... P70552 11818540
    22938 1is7:T (2.8) BS02 PHE ? GO:0005515 ... P70552 11818540
    22939 1is8:A (2.7) BS01 ZN 3.5.4.16 GO:0003934 ... P22288 11818540
    22940 1is8:B (2.7) BS01 ZN 3.5.4.16 GO:0003934 ... P22288 11818540
    22941 1is8:C (2.7) BS01 ZN 3.5.4.16 GO:0003934 ... P22288 11818540
    22942 1is8:D (2.7) BS01 ZN 3.5.4.16 GO:0003934 ... P22288 11818540
    22943 1is8:E (2.7) BS01 ZN 3.5.4.16 GO:0003934 ... P22288 11818540
    22944 1is8:F (2.7) BS01 ZN 3.5.4.16 GO:0003934 ... P22288 11818540
    22945 1is8:G (2.7) BS01 ZN 3.5.4.16 GO:0003934 ... P22288 11818540
    22946 1is8:H (2.7) BS01 ZN 3.5.4.16 GO:0003934 ... P22288 11818540
    22947 1is8:I (2.7) BS01 ZN 3.5.4.16 GO:0003934 ... P22288 11818540
    22948 1is8:J (2.7) BS01 ZN 3.5.4.16 GO:0003934 ... P22288 11818540
    22949 1is8:K (2.7) BS01 PHE ? GO:0005515 ... P70552 11818540
    22950 1is8:K (2.7) BS02 PHE ? GO:0005515 ... P70552 11818540
    22951 1is8:L (2.7) BS01 PHE ? GO:0005515 ... P70552 11818540
    22952 1is8:L (2.7) BS02 PHE ? GO:0005515 ... P70552 11818540
    22953 1is8:M (2.7) BS01 PHE ? GO:0005515 ... P70552 11818540
    22954 1is8:M (2.7) BS02 PHE ? GO:0005515 ... P70552 11818540
    22955 1is8:N (2.7) BS01 PHE ? GO:0005515 ... P70552 11818540
    22956 1is8:N (2.7) BS02 PHE ? GO:0005515 ... P70552 11818540
    22957 1is8:O (2.7) BS01 PHE ? GO:0005515 ... P70552 11818540
    22958 1is8:O (2.7) BS02 PHE ? GO:0005515 ... P70552 11818540
    22959 1is8:P (2.7) BS01 PHE ? GO:0005515 ... P70552 11818540
    22960 1is8:P (2.7) BS02 PHE ? GO:0005515 ... P70552 11818540
    22961 1is8:Q (2.7) BS01 PHE ? GO:0005515 ... P70552 11818540
    22962 1is8:Q (2.7) BS02 PHE ? GO:0005515 ... P70552 11818540
    22963 1is8:R (2.7) BS01 PHE ? GO:0005515 ... P70552 11818540
    22964 1is8:R (2.7) BS02 PHE ? GO:0005515 ... P70552 11818540
    22965 1is8:S (2.7) BS01 PHE ? GO:0005515 ... P70552 11818540
    22966 1is8:S (2.7) BS02 PHE ? GO:0005515 ... P70552 11818540
    22967 1is8:T (2.7) BS01 PHE ? GO:0005515 ... P70552 11818540
    22968 1is8:T (2.7) BS02 PHE ? GO:0005515 ... P70552 11818540
    22969 1isa:A (1.8) BS01 FE2 1.15.1.1 GO:0000303 ... P0AGD3 7849024
    22970 1isa:B (1.8) BS01 FE2 1.15.1.1 GO:0000303 ... P0AGD3 7849024
    22971 1isb:A (1.85) BS01 FE 1.15.1.1 GO:0000303 ... P0AGD3 7849024
    22972 1isb:B (1.85) BS01 FE 1.15.1.1 GO:0000303 ... P0AGD3 7849024
    22973 1isc:A (1.8) BS01 FE 1.15.1.1 GO:0000303 ... P0AGD3 7849024
    22974 1isc:A (1.8) BS02 AZI 1.15.1.1 GO:0000303 ... P0AGD3 7849024
    22975 1isc:B (1.8) BS01 FE 1.15.1.1 GO:0000303 ... P0AGD3 7849024
    22976 1isc:B (1.8) BS02 AZI 1.15.1.1 GO:0000303 ... P0AGD3 7849024
    22977 1isg:A (2.6) BS01 AGS 3.2.2.6 GO:0001931 ... Q10588 11866528
    22978 1isg:B (2.6) BS01 AGS 3.2.2.6 GO:0001931 ... Q10588 11866528
    22979 1ish:A (2.4) BS01 ENP 3.2.2.6 GO:0001931 ... Q10588 11866528
    22980 1ish:B (2.4) BS01 ENP 3.2.2.6 GO:0001931 ... Q10588 11866528
    22981 1isi:A (2.1) BS01 NCA 3.2.2.6 GO:0001931 ... Q10588 11866528
    22982 1isi:A (2.1) BS02 ENQ 3.2.2.6 GO:0001931 ... Q10588 11866528
    22983 1isi:B (2.1) BS01 NCA 3.2.2.6 GO:0001931 ... Q10588 11866528
    22984 1isi:B (2.1) BS02 ENQ 3.2.2.6 GO:0001931 ... Q10588 11866528
    22985 1isj:A (2.3) BS01 NMN 3.2.2.6 GO:0001931 ... Q10588 11866528
    22986 1isj:B (2.3) BS01 NMN 3.2.2.6 GO:0001931 ... Q10588 11866528
    22987 1ism:A (3.0) BS01 NCA 3.2.2.6 GO:0001931 ... Q10588 11866528
    22988 1ism:B (3.0) BS01 NCA 3.2.2.6 GO:0001931 ... Q10588 11866528
    22989 1iso:A (1.9) BS01 NAD 1.1.1.42 GO:0000287 ... P08200 8639526
    22990 1isp:A (1.3) BS01 GOL 3.1.1.3 GO:0004806 ... P37957 12077437
    22991 1isq:A (2.3) BS01 peptide ? GO:0003677 ... O73947 12296822
    22992 1isr:A (4.0) BS01 GLU ? GO:0004930 ... P23385 11867751
    22993 1iss:A (3.3) BS01 MCG ? GO:0004930 ... P23385 11867751 BindingDB: Ki=>10000nM
    22994 1iss:B (3.3) BS01 MCG ? GO:0004930 ... P23385 11867751 BindingDB: Ki=>10000nM
    22995 1isu:A (1.5) BS01 SF4 ? GO:0009055 ... P33678 1453470
    22996 1isu:B (1.5) BS01 SF4 ? GO:0009055 ... P33678 1453470
    22997 1isv:A (2.1) BS01 XYP 3.2.1.8 GO:0004553 ... Q7SI98 11829503
    22998 1isv:A (2.1) BS02 XYP 3.2.1.8 GO:0004553 ... Q7SI98 11829503
    22999 1isv:A (2.1) BS03 XYP 3.2.1.8 GO:0004553 ... Q7SI98 11829503
    23000 1isv:B (2.1) BS01 XYP 3.2.1.8 GO:0004553 ... Q7SI98 11829503

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).