SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    230201 4hnu:D (3.0) BS02 MN 6.4.1.1 GO:0003824 ... A0A0H3JRU9 23286247
    230202 4hnv:A (2.8) BS01 ADP 6.4.1.1 GO:0003824 ... A0A0H3JRU9 23286247
    230203 4hnv:A (2.8) BS02 MN 6.4.1.1 GO:0003824 ... A0A0H3JRU9 23286247
    230204 4hnv:A (2.8) BS03 BTI 6.4.1.1 GO:0003824 ... A0A0H3JRU9 23286247
    230205 4hnv:B (2.8) BS01 BTI 6.4.1.1 GO:0003824 ... A0A0H3JRU9 23286247
    230206 4hnv:B (2.8) BS02 MN 6.4.1.1 GO:0003824 ... A0A0H3JRU9 23286247
    230207 4hnv:C (2.8) BS01 MN 6.4.1.1 GO:0003824 ... A0A0H3JRU9 23286247
    230208 4hnv:C (2.8) BS02 ATP 6.4.1.1 GO:0003824 ... A0A0H3JRU9 23286247
    230209 4hnv:C (2.8) BS03 BTI 6.4.1.1 GO:0003824 ... A0A0H3JRU9 23286247
    230210 4hnv:D (2.8) BS01 BTI 6.4.1.1 GO:0003824 ... A0A0H3JRU9 23286247
    230211 4hnv:D (2.8) BS02 MN 6.4.1.1 GO:0003824 ... A0A0H3JRU9 23286247
    230212 4hnw:A (2.801) BS01 IHP ? GO:0004596 ... P12945 N/A
    230213 4hnw:B (2.801) BS01 IHP 2.3.1.255 GO:0004596 ... P07347 N/A
    230214 4hnx:A (2.339) BS01 G4P ? GO:0004596 ... P12945 N/A
    230215 4hnx:B (2.339) BS01 G4P 2.3.1.255 GO:0004596 ... P07347 N/A
    230216 4hnz:A (2.393) BS01 MG 3.4.25.2 GO:0004298 ... Q383Q5 23818520
    230217 4hnz:B (2.393) BS01 MG 3.4.25.2 GO:0004298 ... Q383Q5 23818520
    230218 4hnz:C (2.393) BS01 MG 3.4.25.2 GO:0004298 ... Q383Q5 23818520
    230219 4hnz:D (2.393) BS01 MG 3.4.25.2 GO:0004298 ... Q383Q5 23818520
    230220 4hnz:E (2.393) BS01 MG 3.4.25.2 GO:0004298 ... Q383Q5 23818520
    230221 4hnz:F (2.393) BS01 MG 3.4.25.2 GO:0004298 ... Q383Q5 23818520
    230222 4hnz:G (2.393) BS01 MG 3.4.25.2 GO:0004298 ... Q383Q5 23818520
    230223 4hnz:H (2.393) BS01 MG 3.4.25.2 GO:0004298 ... Q383Q5 23818520
    230224 4hnz:I (2.393) BS01 MG 3.4.25.2 GO:0004298 ... Q383Q5 23818520
    230225 4hnz:J (2.393) BS01 MG 3.4.25.2 GO:0004298 ... Q383Q5 23818520
    230226 4hnz:K (2.393) BS01 MG 3.4.25.2 GO:0004298 ... Q383Q5 23818520
    230227 4hnz:L (2.393) BS01 MG 3.4.25.2 GO:0004298 ... Q383Q5 23818520
    230228 4ho3:A (1.8) BS01 TTP 2.7.7.24 GO:0008879 ... Q9AGY4 N/A
    230229 4ho3:A (1.8) BS02 TTP 2.7.7.24 GO:0008879 ... Q9AGY4 N/A
    230230 4ho4:A (1.64) BS01 G1P 2.7.7.24 GO:0008879 ... Q9AGY4 N/A
    230231 4ho5:A (1.7) BS01 DAU 2.7.7.24 GO:0008879 ... Q9AGY4 N/A
    230232 4ho5:A (1.7) BS02 DAU 2.7.7.24 GO:0008879 ... Q9AGY4 N/A
    230233 4ho5:A (1.7) BS03 DAU 2.7.7.24 GO:0008879 ... Q9AGY4 N/A
    230234 4ho5:B (1.7) BS01 DAU 2.7.7.24 GO:0008879 ... Q9AGY4 N/A
    230235 4ho5:B (1.7) BS02 DAU 2.7.7.24 GO:0008879 ... Q9AGY4 N/A
    230236 4ho5:B (1.7) BS03 DAU 2.7.7.24 GO:0008879 ... Q9AGY4 N/A
    230237 4ho6:A (1.92) BS01 UPG 2.7.7.24 GO:0008879 ... Q9AGY4 N/A
    230238 4ho6:A (1.92) BS02 UTP 2.7.7.24 GO:0008879 ... Q9AGY4 N/A
    230239 4ho7:A (2.601) BS01 MG 3.4.25.2 GO:0004298 ... Q383Q5 23818520
    230240 4ho7:B (2.601) BS01 MG 3.4.25.2 GO:0004298 ... Q383Q5 23818520
    230241 4ho7:C (2.601) BS01 MG 3.4.25.2 GO:0004298 ... Q383Q5 23818520
    230242 4ho8:A (2.6) BS01 UPG 2.7.7.24 GO:0008879 ... Q9AGY4 N/A
    230243 4ho8:B (2.6) BS01 UPG 2.7.7.24 GO:0008879 ... Q9AGY4 N/A
    230244 4ho8:C (2.6) BS01 UPG 2.7.7.24 GO:0008879 ... Q9AGY4 N/A
    230245 4ho8:D (2.6) BS01 UPG 2.7.7.24 GO:0008879 ... Q9AGY4 N/A
    230246 4ho9:A (1.8) BS01 GDU 2.7.7.24 GO:0008879 ... Q9AGY4 N/A
    230247 4ho9:A (1.8) BS02 UTP 2.7.7.24 GO:0008879 ... Q9AGY4 N/A
    230248 4ho9:A (1.8) BS03 UTP 2.7.7.24 GO:0008879 ... Q9AGY4 N/A
    230249 4ho9:B (1.8) BS01 UTP 2.7.7.24 GO:0008879 ... Q9AGY4 N/A
    230250 4ho9:B (1.8) BS02 GDU 2.7.7.24 GO:0008879 ... Q9AGY4 N/A
    230251 4ho9:B (1.8) BS03 UTP 2.7.7.24 GO:0008879 ... Q9AGY4 N/A
    230252 4hoa:A (2.0) BS01 BGC 3.2.2.22 GO:0017148 ... D9J2T9 N/A
    230253 4hoa:A (2.0) BS02 GAL 3.2.2.22 GO:0017148 ... D9J2T9 N/A
    230254 4hoc:A (2.2) BS01 UD1 2.7.7.24 GO:0008879 ... Q9AGY4 N/A
    230255 4hoc:B (2.2) BS01 UD1 2.7.7.24 GO:0008879 ... Q9AGY4 N/A
    230256 4hod:A (3.3) BS01 LEU ? GO:0005886 ... O67854 N/A
    230257 4hoe:A (1.76) BS01 NDP 1.5.1.3 GO:0004146 ... P22906 24568657
    230258 4hoe:A (1.76) BS02 18G 1.5.1.3 GO:0004146 ... P22906 24568657 MOAD: ic50=36nM
    BindingDB: IC50=36nM
    230259 4hoe:A (1.76) BS03 GLY 1.5.1.3 GO:0004146 ... P22906 24568657
    230260 4hoe:B (1.76) BS01 NDP 1.5.1.3 GO:0004146 ... P22906 24568657
    230261 4hoe:B (1.76) BS02 18G 1.5.1.3 GO:0004146 ... P22906 24568657 MOAD: ic50=36nM
    BindingDB: IC50=36nM
    230262 4hof:A (1.76) BS01 NDP 1.5.1.3 GO:0004146 ... P22906 24568657
    230263 4hof:A (1.76) BS02 18H 1.5.1.3 GO:0004146 ... P22906 24568657 MOAD: ic50=20nM
    BindingDB: IC50=20nM
    230264 4hof:A (1.76) BS03 GLY 1.5.1.3 GO:0004146 ... P22906 24568657
    230265 4hof:B (1.76) BS01 NDP 1.5.1.3 GO:0004146 ... P22906 24568657
    230266 4hof:B (1.76) BS02 18H 1.5.1.3 GO:0004146 ... P22906 24568657 MOAD: ic50=20nM
    BindingDB: IC50=20nM
    230267 4hog:A (2.0) BS01 NDP 1.5.1.3 GO:0004146 ... Q6FPH0 24568657
    230268 4hog:A (2.0) BS02 18H 1.5.1.3 GO:0004146 ... Q6FPH0 24568657 MOAD: ic50=5.5nM
    230269 4hog:B (2.0) BS01 NDP 1.5.1.3 GO:0004146 ... Q6FPH0 24568657
    230270 4hog:B (2.0) BS02 18H 1.5.1.3 GO:0004146 ... Q6FPH0 24568657 MOAD: ic50=5.5nM
    230271 4hoh:A (2.05) BS01 2GP 4.6.1.24 GO:0001411 ... P00651 10211818
    230272 4hoh:B (2.05) BS01 2GP 4.6.1.24 GO:0001411 ... P00651 10211818
    230273 4hoh:C (2.05) BS01 CA 4.6.1.24 GO:0001411 ... P00651 10211818
    230274 4hoh:C (2.05) BS02 2GP 4.6.1.24 GO:0001411 ... P00651 10211818
    230275 4hoh:C (2.05) BS03 2GP 4.6.1.24 GO:0001411 ... P00651 10211818
    230276 4hoh:D (2.05) BS01 CA 4.6.1.24 GO:0001411 ... P00651 10211818
    230277 4hoh:D (2.05) BS02 2GP 4.6.1.24 GO:0001411 ... P00651 10211818
    230278 4hoj:A (1.4) BS01 CA ? GO:0005737 ... O33374 N/A
    230279 4hoj:A (1.4) BS02 GSH ? GO:0005737 ... O33374 N/A
    230280 4hoj:A (1.4) BS03 CA ? GO:0005737 ... O33374 N/A
    230281 4hom:A (1.9) BS01 peptide 3.4.11.2 GO:0002003 ... P15145 23071329
    230282 4hom:A (1.9) BS02 ZN 3.4.11.2 GO:0002003 ... P15145 23071329
    230283 4hon:A (1.799) BS01 peptide 1.14.11.66 N/A Q6B0I6 23219879
    230284 4hon:A (1.799) BS02 AKG 1.14.11.66 N/A Q6B0I6 23219879
    230285 4hon:A (1.799) BS03 ZN 1.14.11.66 N/A Q6B0I6 23219879
    230286 4hon:A (1.799) BS04 PDO 1.14.11.66 N/A Q6B0I6 23219879
    230287 4hon:A (1.799) BS05 PDO 1.14.11.66 N/A Q6B0I6 23219879
    230288 4hon:A (1.799) BS06 PDO 1.14.11.66 N/A Q6B0I6 23219879
    230289 4hon:B (1.799) BS01 peptide 1.14.11.66 N/A Q6B0I6 23219879
    230290 4hon:B (1.799) BS02 PDO 1.14.11.66 N/A Q6B0I6 23219879
    230291 4hon:B (1.799) BS03 AKG 1.14.11.66 N/A Q6B0I6 23219879
    230292 4hon:B (1.799) BS04 ZN 1.14.11.66 N/A Q6B0I6 23219879
    230293 4hon:B (1.799) BS05 PDO 1.14.11.66 N/A Q6B0I6 23219879
    230294 4hoo:A (2.495) BS01 ZN 1.14.11.66 N/A Q6B0I6 23219879
    230295 4hoo:B (2.495) BS01 ZN 1.14.11.66 N/A Q6B0I6 23219879
    230296 4hor:A (1.861) BS01 rna ? GO:0000049 ... Q13325 23334420
    230297 4hos:A (2.0) BS01 rna ? GO:0000049 ... Q13325 23334420
    230298 4hot:A (2.501) BS01 rna ? GO:0000049 ... Q13325 23334420
    230299 4hov:A (2.2) BS01 HEM 1.11.1.- GO:0004601 ... Q0SE24 23305326
    230300 4hov:B (2.2) BS01 HEM 1.11.1.- GO:0004601 ... Q0SE24 23305326
    230301 4hov:C (2.2) BS01 HEM 1.11.1.- GO:0004601 ... Q0SE24 23305326
    230302 4how:A (1.7) BS01 CA 5.4.99.11 GO:0004553 ... D9MPF2 24069347
    230303 4hox:A (2.0) BS01 CA 5.4.99.11 GO:0004553 ... D9MPF2 N/A
    230304 4hoz:A (2.0) BS01 CA 5.4.99.11 GO:0004553 ... D9MPF2 24069347
    230305 4hoz:A (2.0) BS02 GLC 5.4.99.11 GO:0004553 ... D9MPF2 24069347
    230306 4hp0:A (1.19) BS01 NOJ 3.2.1.17 GO:0003796 ... P00698 23303182
    230307 4hp1:C (2.25) BS01 dna 1.14.11.80 GO:0003677 ... A0JP82 23217707
    230308 4hp1:C (2.25) BS02 dna 1.14.11.80 GO:0003677 ... A0JP82 23217707
    230309 4hp1:C (2.25) BS03 ZN 1.14.11.80 GO:0003677 ... A0JP82 23217707
    230310 4hp1:C (2.25) BS04 ZN 1.14.11.80 GO:0003677 ... A0JP82 23217707
    230311 4hp3:C (2.05) BS01 dna 1.14.11.80 GO:0003677 ... A0JP82 23217707
    230312 4hp3:C (2.05) BS02 dna 1.14.11.80 GO:0003677 ... A0JP82 23217707
    230313 4hp3:C (2.05) BS03 ZN 1.14.11.80 GO:0003677 ... A0JP82 23217707
    230314 4hp3:C (2.05) BS04 ZN 1.14.11.80 GO:0003677 ... A0JP82 23217707
    230315 4hp5:A (2.0) BS01 CA 5.4.99.11 GO:0004553 ... D9MPF2 N/A
    230316 4hp5:A (2.0) BS02 GLC 5.4.99.11 GO:0004553 ... D9MPF2 N/A
    230317 4hp8:A (1.35) BS01 NAP ? GO:0008678 ... A9CEQ9 N/A
    230318 4hp8:B (1.35) BS01 NAP ? GO:0008678 ... A9CEQ9 N/A
    230319 4hpa:A (1.5) BS01 HEM 1.7.6.1 GO:0005576 ... Q94734 23474537
    230320 4hpb:A (1.6) BS01 HEM 1.7.6.1 GO:0005576 ... Q94734 23474537
    230321 4hpc:A (1.4) BS01 HEM 1.7.6.1 GO:0005576 ... Q94734 23474537
    230322 4hpd:A (1.3) BS01 HEM 1.7.6.1 GO:0005576 ... Q94734 23474537
    230323 4hph:A (1.7) BS01 GLC 5.4.99.11 GO:0004553 ... D9MPF2 24069347
    230324 4hph:A (1.7) BS02 FRU 5.4.99.11 GO:0004553 ... D9MPF2 24069347
    230325 4hph:A (1.7) BS03 CA 5.4.99.11 GO:0004553 ... D9MPF2 24069347
    230326 4hpi:A (1.19) BS01 NOJ 3.2.1.17 GO:0003796 ... P00698 23303182
    230327 4hpj:A (1.45) BS01 F9F 4.2.1.20 GO:0000162 ... P00929 23952479
    230328 4hpj:B (1.45) BS01 1D0 4.2.1.20 GO:0000162 ... P0A2K1 23952479
    230329 4hpk:A (1.35) BS01 CA 3.4.24.3 N/A Q9X721 23144249
    230330 4hpk:A (1.35) BS02 CA 3.4.24.3 N/A Q9X721 23144249
    230331 4hpk:B (1.35) BS01 CA 3.4.24.3 N/A Q9X721 23144249
    230332 4hpk:B (1.35) BS02 CA 3.4.24.3 N/A Q9X721 23144249
    230333 4hpn:A (1.6) BS01 CA 5.5.1.27 GO:0000287 ... A9CEQ8 26750482
    230334 4hpn:A (1.6) BS02 CA 5.5.1.27 GO:0000287 ... A9CEQ8 26750482
    230335 4hpo:H (1.694) BS01 peptide N/A N/A N/A 23313589
    230336 4hpo:L (1.694) BS01 peptide N/A N/A N/A 23313589
    230337 4hpp:A (2.5) BS01 MG 6.3.1.11 GO:0003824 ... Q9HT65 23234431
    230338 4hpp:A (2.5) BS02 GLU 6.3.1.11 GO:0003824 ... Q9HT65 23234431
    230339 4hpt:E (2.15) BS01 peptide 2.7.11.11 GO:0000287 ... P05132 23458248
    230340 4hpt:E (2.15) BS02 ANP 2.7.11.11 GO:0000287 ... P05132 23458248
    230341 4hpt:E (2.15) BS03 MG 2.7.11.11 GO:0000287 ... P05132 23458248
    230342 4hpu:E (1.55) BS01 peptide 2.7.11.11 GO:0000287 ... P05132 23458248
    230343 4hpu:E (1.55) BS02 ANP 2.7.11.11 GO:0000287 ... P05132 23458248
    230344 4hpu:E (1.55) BS03 MG 2.7.11.11 GO:0000287 ... P05132 23458248
    230345 4hpu:E (1.55) BS04 ANP 2.7.11.11 GO:0000287 ... P05132 23458248
    230346 4hpw:A (1.998) BS01 3YM 6.1.1.1 GO:0000166 ... Q57834 N/A
    230347 4hpx:A (1.65) BS01 F9F 4.2.1.20 GO:0000162 ... P00929 23952479
    230348 4hpx:B (1.65) BS01 BZI 4.2.1.20 GO:0000162 ... P0A2K1 23952479
    230349 4hpx:B (1.65) BS02 BZI 4.2.1.20 GO:0000162 ... P0A2K1 23952479
    230350 4hpx:B (1.65) BS03 BZI 4.2.1.20 GO:0000162 ... P0A2K1 23952479
    230351 4hpx:B (1.65) BS04 0JO 4.2.1.20 GO:0000162 ... P0A2K1 23952479
    230352 4hpy:H (1.5) BS01 peptide ? N/A Q6N089 23313589
    230353 4hpy:L (1.5) BS01 peptide ? GO:0005576 ... Q8N5F4 23313589
    230354 4hqb:A (2.301) BS01 dna ? N/A Q9RY80 23975200
    230355 4hqb:A (2.301) BS02 dna ? N/A Q9RY80 23975200
    230356 4hqb:B (2.301) BS01 dna ? N/A Q9RY80 23975200
    230357 4hqb:E (2.301) BS01 dna ? N/A Q9RY80 23975200
    230358 4hqe:A (2.299) BS01 dna ? N/A A0A0H3JWI0 23479646
    230359 4hqe:A (2.299) BS02 dna ? N/A A0A0H3JWI0 23479646
    230360 4hqe:B (2.299) BS01 dna ? N/A A0A0H3JWI0 23479646
    230361 4hqe:B (2.299) BS02 dna ? N/A A0A0H3JWI0 23479646
    230362 4hqj:A (4.3) BS01 peptide 7.2.2.13 GO:0000166 ... P05024 24051246
    230363 4hqj:A (4.3) BS02 ADP 7.2.2.13 GO:0000166 ... P05024 24051246
    230364 4hqj:A (4.3) BS03 ALF 7.2.2.13 GO:0000166 ... P05024 24051246
    230365 4hqj:A (4.3) BS04 MG 7.2.2.13 GO:0000166 ... P05024 24051246
    230366 4hqj:A (4.3) BS05 CLR 7.2.2.13 GO:0000166 ... P05024 24051246
    230367 4hqj:A (4.3) BS06 CLR 7.2.2.13 GO:0000166 ... P05024 24051246
    230368 4hqj:B (4.3) BS01 peptide ? GO:0001671 ... P05027 24051246
    230369 4hqj:B (4.3) BS02 CLR ? GO:0001671 ... P05027 24051246
    230370 4hqj:C (4.3) BS01 peptide 7.2.2.13 GO:0000166 ... P05024 24051246
    230371 4hqj:C (4.3) BS02 ADP 7.2.2.13 GO:0000166 ... P05024 24051246
    230372 4hqj:C (4.3) BS03 ALF 7.2.2.13 GO:0000166 ... P05024 24051246
    230373 4hqj:C (4.3) BS04 MG 7.2.2.13 GO:0000166 ... P05024 24051246
    230374 4hqj:C (4.3) BS05 CLR 7.2.2.13 GO:0000166 ... P05024 24051246
    230375 4hqj:C (4.3) BS06 CLR 7.2.2.13 GO:0000166 ... P05024 24051246
    230376 4hqj:D (4.3) BS01 peptide ? GO:0001671 ... P05027 24051246
    230377 4hql:A (2.241) BS01 BGC ? N/A Q9TVF0 23236185
    230378 4hql:A (2.241) BS02 MG ? N/A Q9TVF0 23236185
    230379 4hql:B (2.241) BS01 FUC ? N/A Q9TVF0 23236185
    230380 4hql:B (2.241) BS02 MG ? N/A Q9TVF0 23236185
    230381 4hqm:A (2.55) BS01 17Z N/A N/A N/A 23479646
    230382 4hqm:B (2.55) BS01 17Z N/A N/A N/A 23479646
    230383 4hqn:A (2.196) BS01 BGC ? N/A Q9TVF0 23236185
    230384 4hqn:A (2.196) BS02 MN ? N/A Q9TVF0 23236185
    230385 4hqn:B (2.196) BS01 FUC ? N/A Q9TVF0 23236185
    230386 4hqn:B (2.196) BS02 MN ? N/A Q9TVF0 23236185
    230387 4hqo:A (2.194) BS01 FUC ? N/A Q9TVF0 23236185
    230388 4hqo:A (2.194) BS02 MG ? N/A Q9TVF0 23236185
    230389 4hqr:A (3.0) BS01 peptide 3.4.22.60 GO:0004197 ... P55210 23897474
    230390 4hqr:B (3.0) BS01 peptide 3.4.22.60 GO:0004197 ... P55210 23897474
    230391 4hqs:A (1.48) BS01 MG ? GO:0016491 ... A0A0H2UP26 24136784
    230392 4hqs:A (1.48) BS02 MG ? GO:0016491 ... A0A0H2UP26 24136784
    230393 4hqs:A (1.48) BS03 MG ? GO:0016491 ... A0A0H2UP26 24136784
    230394 4hqs:A (1.48) BS04 MG ? GO:0016491 ... A0A0H2UP26 24136784
    230395 4hqu:A (2.2) BS01 dna ? GO:0008083 ... P01127 23139410
    230396 4hqv:A (1.66) BS01 ZN 2.4.2.29 GO:0002099 ... P28720 23704982
    230397 4hqv:A (1.66) BS02 QEI 2.4.2.29 GO:0002099 ... P28720 23704982
    230398 4hqx:A (2.3) BS01 dna ? GO:0008083 ... P01127 23139410
    230399 4hr0:A (1.896) BS01 MN3 1.17.4.1 GO:0009263 ... Q5KW80 24101498
    230400 4hr0:A (1.896) BS02 FE 1.17.4.1 GO:0009263 ... Q5KW80 24101498

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).