SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    232401 4ihc:E (2.0) BS01 MG 4.2.1.-
    4.2.1.39
    4.2.1.8
    GO:0000287 ... C6CBG9 N/A
    232402 4ihc:F (2.0) BS01 MG 4.2.1.-
    4.2.1.39
    4.2.1.8
    GO:0000287 ... C6CBG9 N/A
    232403 4ihc:G (2.0) BS01 MG 4.2.1.-
    4.2.1.39
    4.2.1.8
    GO:0000287 ... C6CBG9 N/A
    232404 4ihc:H (2.0) BS01 MG 4.2.1.-
    4.2.1.39
    4.2.1.8
    GO:0000287 ... C6CBG9 N/A
    232405 4ihf:A (2.1) BS01 1F7 2.3.1.191 GO:0005515 ... P21645 24196711
    232406 4ihf:A (2.1) BS02 1F7 2.3.1.191 GO:0005515 ... P21645 24196711
    232407 4ihf:A (2.1) BS03 1F7 2.3.1.191 GO:0005515 ... P21645 24196711
    232408 4ihf:B (2.1) BS01 1F7 2.3.1.191 GO:0005515 ... P21645 24196711
    232409 4ihf:B (2.1) BS02 1F7 2.3.1.191 GO:0005515 ... P21645 24196711
    232410 4ihf:B (2.1) BS03 1F7 2.3.1.191 GO:0005515 ... P21645 24196711
    232411 4ihf:C (2.1) BS01 1F7 2.3.1.191 GO:0005515 ... P21645 24196711
    232412 4ihf:C (2.1) BS02 1F7 2.3.1.191 GO:0005515 ... P21645 24196711
    232413 4ihf:C (2.1) BS03 1F7 2.3.1.191 GO:0005515 ... P21645 24196711
    232414 4ihf:D (2.1) BS01 1F7 2.3.1.191 GO:0005515 ... P21645 24196711
    232415 4ihf:D (2.1) BS02 1F7 2.3.1.191 GO:0005515 ... P21645 24196711
    232416 4ihf:D (2.1) BS03 1F7 2.3.1.191 GO:0005515 ... P21645 24196711
    232417 4ihf:E (2.1) BS01 1F7 2.3.1.191 GO:0005515 ... P21645 24196711
    232418 4ihf:E (2.1) BS02 1F7 2.3.1.191 GO:0005515 ... P21645 24196711
    232419 4ihf:F (2.1) BS01 1F7 2.3.1.191 GO:0005515 ... P21645 24196711
    232420 4ihf:F (2.1) BS02 1F7 2.3.1.191 GO:0005515 ... P21645 24196711
    232421 4ihf:F (2.1) BS03 1F7 2.3.1.191 GO:0005515 ... P21645 24196711
    232422 4ihg:B (2.89) BS01 PNS 2.3.1.191 GO:0005515 ... P21645 24196711
    232423 4ihg:B (2.89) BS02 PNS 2.3.1.191 GO:0005515 ... P21645 24196711
    232424 4ihg:C (2.89) BS01 PNS 2.3.1.191 GO:0005515 ... P21645 24196711
    232425 4ihg:D (2.89) BS01 PNS 2.3.1.191 GO:0005515 ... P21645 24196711
    232426 4ihg:D (2.89) BS02 PNS 2.3.1.191 GO:0005515 ... P21645 24196711
    232427 4ihg:E (2.89) BS01 peptide 2.3.1.191 GO:0005515 ... P21645 24196711
    232428 4ihh:A (2.132) BS01 peptide 2.3.1.191 GO:0005515 ... P21645 24196711
    232429 4ihh:A (2.132) BS02 PNS 2.3.1.191 GO:0005515 ... P21645 24196711
    232430 4ihh:A (2.132) BS03 PNS 2.3.1.191 GO:0005515 ... P21645 24196711
    232431 4ihh:B (2.132) BS01 PNS 2.3.1.191 GO:0005515 ... P21645 24196711
    232432 4ihh:B (2.132) BS02 PNS 2.3.1.191 GO:0005515 ... P21645 24196711
    232433 4ihh:B (2.132) BS03 PNS 2.3.1.191 GO:0005515 ... P21645 24196711
    232434 4ihh:C (2.132) BS01 peptide 2.3.1.191 GO:0005515 ... P21645 24196711
    232435 4ihh:C (2.132) BS02 PNS 2.3.1.191 GO:0005515 ... P21645 24196711
    232436 4ihh:C (2.132) BS03 PNS 2.3.1.191 GO:0005515 ... P21645 24196711
    232437 4ihh:C (2.132) BS04 PNS 2.3.1.191 GO:0005515 ... P21645 24196711
    232438 4ihh:D (2.132) BS01 PNS 2.3.1.191 GO:0005515 ... P21645 24196711
    232439 4ihh:D (2.132) BS02 PNS 2.3.1.191 GO:0005515 ... P21645 24196711
    232440 4ihh:E (2.132) BS01 PNS 2.3.1.191 GO:0005515 ... P21645 24196711
    232441 4ihh:E (2.132) BS02 PNS 2.3.1.191 GO:0005515 ... P21645 24196711
    232442 4ihh:E (2.132) BS03 PNS 2.3.1.191 GO:0005515 ... P21645 24196711
    232443 4ihh:F (2.132) BS01 PNS 2.3.1.191 GO:0005515 ... P21645 24196711
    232444 4ihh:F (2.132) BS02 PNS 2.3.1.191 GO:0005515 ... P21645 24196711
    232445 4ihh:F (2.132) BS03 PNS 2.3.1.191 GO:0005515 ... P21645 24196711
    232446 4ihi:A (2.25) BS01 NAD 1.2.1.88 GO:0003842 ... O50443 24699642
    232447 4ihj:A (2.0) BS01 GTP 3.6.5.- GO:0000226 ... P81947 23358242
    232448 4ihj:A (2.0) BS02 CA 3.6.5.- GO:0000226 ... P81947 23358242
    232449 4ihj:B (2.0) BS01 GDP ? GO:0000226 ... Q6B856 23358242
    232450 4ihj:C (2.0) BS01 GTP 3.6.5.- GO:0000226 ... P81947 23358242
    232451 4ihj:C (2.0) BS02 CA 3.6.5.- GO:0000226 ... P81947 23358242
    232452 4ihj:D (2.0) BS01 GDP ? GO:0000226 ... Q6B856 23358242
    232453 4ihj:F (2.0) BS01 MG N/A GO:0036211 ... N/A 23358242
    232454 4ihj:F (2.0) BS02 ADP N/A GO:0036211 ... N/A 23358242
    232455 4ihl:A (2.2) BS01 peptide ? GO:0000122 ... P63104 23808890
    232456 4ihl:A (2.2) BS02 1F5 ? GO:0000122 ... P63104 23808890 BindingDB: Kd=9.0nM
    232457 4ihl:B (2.2) BS01 peptide ? GO:0000122 ... P63104 23808890
    232458 4ihl:B (2.2) BS02 1F5 ? GO:0000122 ... P63104 23808890 BindingDB: Kd=9.0nM
    232459 4ihm:A (1.29) BS01 ZN 3.4.17.18 GO:0004181 ... P29068 N/A
    232460 4ihm:A (1.29) BS02 CA 3.4.17.18 GO:0004181 ... P29068 N/A
    232461 4ihm:A (1.29) BS03 CA 3.4.17.18 GO:0004181 ... P29068 N/A
    232462 4ihm:A (1.29) BS04 CA 3.4.17.18 GO:0004181 ... P29068 N/A
    232463 4ihm:A (1.29) BS05 CA 3.4.17.18 GO:0004181 ... P29068 N/A
    232464 4ihn:B (1.16) BS01 peptide ? GO:0005179 ... P01317 N/A
    232465 4iho:A (2.8) BS01 peptide ? N/A P01899 23939911
    232466 4iho:D (2.8) BS01 peptide ? N/A P01899 23939911
    232467 4ihp:A (2.27) BS01 1FB 2.7.11.17 GO:0000166 ... Q9BJF5 N/A BindingDB: IC50=10.0nM
    232468 4ihq:A (2.0) BS01 ADP 3.6.1.4 GO:0005515 ... Q4J9L0 23416110
    232469 4ihq:A (2.0) BS02 PO4 3.6.1.4 GO:0005515 ... Q4J9L0 23416110
    232470 4ihq:B (2.0) BS01 ADP 3.6.1.4 GO:0005515 ... Q4J9L0 23416110
    232471 4ihq:C (2.0) BS01 ADP 3.6.1.4 GO:0005515 ... Q4J9L0 23416110
    232472 4ihs:A (3.1) BS01 dna ? GO:0003700 ... O68014 24100318
    232473 4ihs:A (3.1) BS02 dna ? GO:0003700 ... O68014 24100318
    232474 4ihs:B (3.1) BS01 dna ? GO:0003700 ... O68014 24100318
    232475 4ihs:B (3.1) BS02 dna ? GO:0003700 ... O68014 24100318
    232476 4ihs:C (3.1) BS01 dna ? GO:0003700 ... O68014 24100318
    232477 4ihs:C (3.1) BS02 dna ? GO:0003700 ... O68014 24100318
    232478 4ihs:D (3.1) BS01 dna ? GO:0003700 ... O68014 24100318
    232479 4ihs:D (3.1) BS02 dna ? GO:0003700 ... O68014 24100318
    232480 4iht:A (3.0) BS01 dna ? GO:0003700 ... O68014 24100318
    232481 4iht:A (3.0) BS02 dna ? GO:0003700 ... O68014 24100318
    232482 4iht:B (3.0) BS01 dna ? GO:0003700 ... O68014 24100318
    232483 4iht:B (3.0) BS02 dna ? GO:0003700 ... O68014 24100318
    232484 4iht:C (3.0) BS01 dna ? GO:0003700 ... O68014 24100318
    232485 4iht:C (3.0) BS02 dna ? GO:0003700 ... O68014 24100318
    232486 4iht:D (3.0) BS01 dna ? GO:0003700 ... O68014 24100318
    232487 4iht:D (3.0) BS02 dna ? GO:0003700 ... O68014 24100318
    232488 4ihv:A (2.716) BS01 dna N/A GO:0003677 ... N/A 23661683
    232489 4ihv:A (2.716) BS02 dna N/A GO:0003677 ... N/A 23661683
    232490 4ihv:B (2.716) BS01 dna N/A GO:0003677 ... N/A 23661683
    232491 4ihv:B (2.716) BS02 dna N/A GO:0003677 ... N/A 23661683
    232492 4ihw:A (2.7) BS01 dna N/A GO:0003677 ... N/A 23661683
    232493 4ihw:A (2.7) BS02 dna N/A GO:0003677 ... N/A 23661683
    232494 4ihw:B (2.7) BS01 dna N/A GO:0003677 ... N/A 23661683
    232495 4ihw:B (2.7) BS02 dna N/A GO:0003677 ... N/A 23661683
    232496 4ihx:A (2.8) BS01 dna N/A GO:0003677 ... N/A 23661683
    232497 4ihx:A (2.8) BS02 dna N/A GO:0003677 ... N/A 23661683
    232498 4ihx:B (2.8) BS01 dna N/A GO:0003677 ... N/A 23661683
    232499 4ihx:B (2.8) BS02 dna N/A GO:0003677 ... N/A 23661683
    232500 4ihy:A (2.9) BS01 dna N/A GO:0003677 ... N/A 23661683
    232501 4ihy:A (2.9) BS02 dna N/A GO:0003677 ... N/A 23661683
    232502 4ihy:B (2.9) BS01 dna N/A GO:0003677 ... N/A 23661683
    232503 4ihy:B (2.9) BS02 dna N/A GO:0003677 ... N/A 23661683
    232504 4ii1:A (2.65) BS01 ZN ? GO:0046872 ... Q8N5A5 N/A
    232505 4ii1:B (2.65) BS01 ZN ? GO:0046872 ... Q8N5A5 N/A
    232506 4ii1:C (2.65) BS01 ZN ? GO:0046872 ... Q8N5A5 N/A
    232507 4ii1:D (2.65) BS01 ZN ? GO:0046872 ... Q8N5A5 N/A
    232508 4ii2:A (2.2) BS01 ATP 6.2.1.45 GO:0000287 ... O94609 23416107
    232509 4ii3:A (2.9) BS01 MG 6.2.1.45 GO:0000287 ... O94609 23416107
    232510 4ii3:A (2.9) BS02 ATP 6.2.1.45 GO:0000287 ... O94609 23416107
    232511 4ii3:C (2.9) BS01 ATP 6.2.1.45 GO:0000287 ... O94609 23416107
    232512 4ii3:C (2.9) BS02 CA 6.2.1.45 GO:0000287 ... O94609 23416107
    232513 4ii4:A (2.799) BS01 BYC 1.14.13.149 GO:0005515 ... P76077 N/A
    232514 4ii5:A (2.15) BS01 ADP 2.7.11.22 GO:0000082 ... P24941 22891849
    232515 4ii5:A (2.15) BS02 MG 2.7.11.22 GO:0000082 ... P24941 22891849
    232516 4ii5:C (2.15) BS01 ADP 2.7.11.22 GO:0000082 ... P24941 22891849
    232517 4ii5:C (2.15) BS02 MG 2.7.11.22 GO:0000082 ... P24941 22891849
    232518 4ii8:A (1.88) BS01 010 3.2.1.17 GO:0003796 ... P00698 26926993
    232519 4ii9:A (1.66) BS01 peptide 2.3.2.10 GO:0009252 ... Q9EY50 23744707
    232520 4ii9:A (1.66) BS02 rna 2.3.2.10 GO:0009252 ... Q9EY50 23744707
    232521 4ii9:A (1.66) BS03 UDP 2.3.2.10 GO:0009252 ... Q9EY50 23744707
    232522 4iib:A (1.8) BS01 BMA 3.2.1.21 GO:0004553 ... P48825 23537284
    232523 4iib:A (1.8) BS02 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232524 4iib:A (1.8) BS03 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232525 4iib:A (1.8) BS04 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232526 4iib:A (1.8) BS05 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232527 4iib:A (1.8) BS06 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232528 4iib:A (1.8) BS07 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232529 4iib:B (1.8) BS01 BMA 3.2.1.21 GO:0004553 ... P48825 23537284
    232530 4iib:B (1.8) BS02 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232531 4iib:B (1.8) BS03 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232532 4iib:B (1.8) BS04 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232533 4iib:B (1.8) BS05 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232534 4iib:B (1.8) BS06 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232535 4iib:B (1.8) BS07 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232536 4iic:A (1.9) BS01 BMA 3.2.1.21 GO:0004553 ... P48825 23537284
    232537 4iic:A (1.9) BS02 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232538 4iic:A (1.9) BS03 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232539 4iic:A (1.9) BS04 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232540 4iic:A (1.9) BS05 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232541 4iic:A (1.9) BS06 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232542 4iic:A (1.9) BS07 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232543 4iic:A (1.9) BS08 IFM 3.2.1.21 GO:0004553 ... P48825 23537284 MOAD: Ki=14uM
    232544 4iic:B (1.9) BS01 BMA 3.2.1.21 GO:0004553 ... P48825 23537284
    232545 4iic:B (1.9) BS02 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232546 4iic:B (1.9) BS03 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232547 4iic:B (1.9) BS04 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232548 4iic:B (1.9) BS05 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232549 4iic:B (1.9) BS06 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232550 4iic:B (1.9) BS07 IFM 3.2.1.21 GO:0004553 ... P48825 23537284 MOAD: Ki=14uM
    232551 4iid:A (2.3) BS01 BMA 3.2.1.21 GO:0004553 ... P48825 23537284
    232552 4iid:A (2.3) BS02 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232553 4iid:A (2.3) BS03 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232554 4iid:A (2.3) BS04 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232555 4iid:A (2.3) BS05 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232556 4iid:A (2.3) BS06 NOJ 3.2.1.21 GO:0004553 ... P48825 23537284 MOAD: Ki=2.4uM
    232557 4iid:B (2.3) BS01 BMA 3.2.1.21 GO:0004553 ... P48825 23537284
    232558 4iid:B (2.3) BS02 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232559 4iid:B (2.3) BS03 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232560 4iid:B (2.3) BS04 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232561 4iid:B (2.3) BS05 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232562 4iid:B (2.3) BS06 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232563 4iid:B (2.3) BS07 NOJ 3.2.1.21 GO:0004553 ... P48825 23537284 MOAD: Ki=2.4uM
    232564 4iie:A (2.0) BS01 BMA 3.2.1.21 GO:0004553 ... P48825 23537284
    232565 4iie:A (2.0) BS02 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232566 4iie:A (2.0) BS03 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232567 4iie:A (2.0) BS04 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232568 4iie:A (2.0) BS05 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232569 4iie:A (2.0) BS06 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232570 4iie:A (2.0) BS07 CGB 3.2.1.21 GO:0004553 ... P48825 23537284 MOAD: Ki=4600uM
    232571 4iie:B (2.0) BS01 BMA 3.2.1.21 GO:0004553 ... P48825 23537284
    232572 4iie:B (2.0) BS02 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232573 4iie:B (2.0) BS03 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232574 4iie:B (2.0) BS04 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232575 4iie:B (2.0) BS05 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232576 4iie:B (2.0) BS06 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232577 4iie:B (2.0) BS07 CGB 3.2.1.21 GO:0004553 ... P48825 23537284 MOAD: Ki=4600uM
    232578 4iif:A (2.45) BS01 BMA 3.2.1.21 GO:0004553 ... P48825 23537284
    232579 4iif:A (2.45) BS02 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232580 4iif:A (2.45) BS03 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232581 4iif:A (2.45) BS04 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232582 4iif:A (2.45) BS05 CTS 3.2.1.21 GO:0004553 ... P48825 23537284 MOAD: Ki=6.6uM
    232583 4iif:B (2.45) BS01 BMA 3.2.1.21 GO:0004553 ... P48825 23537284
    232584 4iif:B (2.45) BS02 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232585 4iif:B (2.45) BS03 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232586 4iif:B (2.45) BS04 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232587 4iif:B (2.45) BS05 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232588 4iif:B (2.45) BS06 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232589 4iif:B (2.45) BS07 CTS 3.2.1.21 GO:0004553 ... P48825 23537284 MOAD: Ki=6.6uM
    232590 4iig:A (2.3) BS01 BMA 3.2.1.21 GO:0004553 ... P48825 23537284
    232591 4iig:A (2.3) BS02 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232592 4iig:A (2.3) BS03 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232593 4iig:A (2.3) BS04 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232594 4iig:A (2.3) BS05 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232595 4iig:A (2.3) BS06 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232596 4iig:A (2.3) BS07 MAN 3.2.1.21 GO:0004553 ... P48825 23537284
    232597 4iig:A (2.3) BS08 BGC 3.2.1.21 GO:0004553 ... P48825 23537284
    232598 4iig:A (2.3) BS09 BGC 3.2.1.21 GO:0004553 ... P48825 23537284
    232599 4iig:B (2.3) BS01 BMA 3.2.1.21 GO:0004553 ... P48825 23537284
    232600 4iig:B (2.3) BS02 MAN 3.2.1.21 GO:0004553 ... P48825 23537284

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).