SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    233201 4ind:A (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    233202 4ind:A (1.8) BS04 2HP ? N/A Q6Q0L3 N/A
    233203 4ind:B (1.8) BS01 2HP ? N/A Q6Q0L3 N/A
    233204 4ind:B (1.8) BS02 2HP ? N/A Q6Q0L3 N/A
    233205 4ind:B (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    233206 4ind:B (1.8) BS04 2HP ? N/A Q6Q0L3 N/A
    233207 4ind:C (1.8) BS01 2HP ? N/A Q6Q0L3 N/A
    233208 4ind:C (1.8) BS02 2HP ? N/A Q6Q0L3 N/A
    233209 4ind:C (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    233210 4ind:D (1.8) BS01 2HP ? N/A Q6Q0L3 N/A
    233211 4ind:D (1.8) BS02 2HP ? N/A Q6Q0L3 N/A
    233212 4ind:D (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    233213 4ind:D (1.8) BS04 2HP ? N/A Q6Q0L3 N/A
    233214 4ind:E (1.8) BS01 2HP ? N/A Q6Q0L3 N/A
    233215 4ind:E (1.8) BS02 2HP ? N/A Q6Q0L3 N/A
    233216 4ind:E (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    233217 4ind:E (1.8) BS04 2HP ? N/A Q6Q0L3 N/A
    233218 4ind:F (1.8) BS01 2HP ? N/A Q6Q0L3 N/A
    233219 4ind:F (1.8) BS02 2HP ? N/A Q6Q0L3 N/A
    233220 4ind:F (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    233221 4ind:F (1.8) BS04 2HP ? N/A Q6Q0L3 N/A
    233222 4ind:G (1.8) BS01 2HP ? N/A Q6Q0L3 N/A
    233223 4ind:G (1.8) BS02 2HP ? N/A Q6Q0L3 N/A
    233224 4ind:G (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    233225 4ind:G (1.8) BS04 2HP ? N/A Q6Q0L3 N/A
    233226 4ind:H (1.8) BS01 2HP ? N/A Q6Q0L3 N/A
    233227 4ind:H (1.8) BS02 2HP ? N/A Q6Q0L3 N/A
    233228 4ind:H (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    233229 4ind:H (1.8) BS04 2HP ? N/A Q6Q0L3 N/A
    233230 4ind:I (1.8) BS01 2HP ? N/A Q6Q0L3 N/A
    233231 4ind:I (1.8) BS02 2HP ? N/A Q6Q0L3 N/A
    233232 4ind:I (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    233233 4ind:I (1.8) BS04 2HP ? N/A Q6Q0L3 N/A
    233234 4ind:J (1.8) BS01 2HP ? N/A Q6Q0L3 N/A
    233235 4ind:J (1.8) BS02 2HP ? N/A Q6Q0L3 N/A
    233236 4ind:J (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    233237 4ind:K (1.8) BS01 2HP ? N/A Q6Q0L3 N/A
    233238 4ind:K (1.8) BS02 2HP ? N/A Q6Q0L3 N/A
    233239 4ind:K (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    233240 4ind:L (1.8) BS01 2HP ? N/A Q6Q0L3 N/A
    233241 4ind:L (1.8) BS02 2HP ? N/A Q6Q0L3 N/A
    233242 4ind:L (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    233243 4ind:L (1.8) BS04 2HP ? N/A Q6Q0L3 N/A
    233244 4ind:M (1.8) BS01 2HP ? N/A Q6Q0L3 N/A
    233245 4ind:M (1.8) BS02 2HP ? N/A Q6Q0L3 N/A
    233246 4ind:M (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    233247 4ind:N (1.8) BS01 2HP ? N/A Q6Q0L3 N/A
    233248 4ind:N (1.8) BS02 2HP ? N/A Q6Q0L3 N/A
    233249 4ind:N (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    233250 4ind:N (1.8) BS04 2HP ? N/A Q6Q0L3 N/A
    233251 4ind:O (1.8) BS01 2HP ? N/A Q6Q0L3 N/A
    233252 4ind:O (1.8) BS02 2HP ? N/A Q6Q0L3 N/A
    233253 4ind:O (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    233254 4ind:O (1.8) BS04 2HP ? N/A Q6Q0L3 N/A
    233255 4ind:P (1.8) BS01 2HP ? N/A Q6Q0L3 N/A
    233256 4ind:P (1.8) BS02 2HP ? N/A Q6Q0L3 N/A
    233257 4ind:P (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    233258 4ind:Q (1.8) BS01 2HP ? N/A Q6Q0L3 N/A
    233259 4ind:Q (1.8) BS02 2HP ? N/A Q6Q0L3 N/A
    233260 4ind:Q (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    233261 4ind:Q (1.8) BS04 2HP ? N/A Q6Q0L3 N/A
    233262 4ind:R (1.8) BS01 2HP ? N/A Q6Q0L3 N/A
    233263 4ind:R (1.8) BS02 2HP ? N/A Q6Q0L3 N/A
    233264 4ind:R (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    233265 4ind:R (1.8) BS04 2HP ? N/A Q6Q0L3 N/A
    233266 4ind:S (1.8) BS01 2HP ? N/A Q6Q0L3 N/A
    233267 4ind:S (1.8) BS02 2HP ? N/A Q6Q0L3 N/A
    233268 4ind:S (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    233269 4ind:S (1.8) BS04 2HP ? N/A Q6Q0L3 N/A
    233270 4ind:T (1.8) BS01 2HP ? N/A Q6Q0L3 N/A
    233271 4ind:T (1.8) BS02 2HP ? N/A Q6Q0L3 N/A
    233272 4ind:T (1.8) BS03 2HP ? N/A Q6Q0L3 N/A
    233273 4ind:T (1.8) BS04 2HP ? N/A Q6Q0L3 N/A
    233274 4ine:A (1.45) BS01 SAH 2.1.1.103 GO:0000234 ... Q22993 N/A
    233275 4ine:A (1.45) BS02 OPE 2.1.1.103 GO:0000234 ... Q22993 N/A
    233276 4ine:B (1.45) BS01 SAH 2.1.1.103 GO:0000234 ... Q22993 N/A
    233277 4ine:B (1.45) BS02 OPE 2.1.1.103 GO:0000234 ... Q22993 N/A
    233278 4inf:A (1.48) BS01 CA ? GO:0005737 ... Q2GA79 N/A
    233279 4inf:A (1.48) BS02 OXD ? GO:0005737 ... Q2GA79 N/A
    233280 4inf:B (1.48) BS01 CA ? GO:0005737 ... Q2GA79 N/A
    233281 4inf:B (1.48) BS02 OXD ? GO:0005737 ... Q2GA79 N/A
    233282 4inf:C (1.48) BS01 CA ? GO:0005737 ... Q2GA79 N/A
    233283 4inf:C (1.48) BS02 OXD ? GO:0005737 ... Q2GA79 N/A
    233284 4inf:D (1.48) BS01 CA ? GO:0005737 ... Q2GA79 N/A
    233285 4inf:D (1.48) BS02 OXD ? GO:0005737 ... Q2GA79 N/A
    233286 4inh:A (1.7) BS01 peptide 2.7.7.48
    3.4.22.66
    3.6.1.15
    GO:0004197 ... Q83883 23365454
    233287 4inh:B (1.7) BS01 peptide 2.7.7.48
    3.4.22.66
    3.6.1.15
    GO:0004197 ... Q83883 23365454
    233288 4inh:C (1.7) BS01 peptide 2.7.7.48
    3.4.22.66
    3.6.1.15
    GO:0004197 ... Q83883 23365454
    233289 4inh:D (1.7) BS01 peptide 2.7.7.48
    3.4.22.66
    3.6.1.15
    GO:0004197 ... Q83883 23365454
    233290 4inh:E (1.7) BS01 peptide 2.7.7.48
    3.4.22.66
    3.6.1.15
    GO:0004197 ... Q83883 23365454
    233291 4inh:F (1.7) BS01 peptide 2.7.7.48
    3.4.22.66
    3.6.1.15
    GO:0004197 ... Q83883 23365454
    233292 4inh:G (1.7) BS01 peptide 2.7.7.48
    3.4.22.66
    3.6.1.15
    GO:0004197 ... Q83883 23365454
    233293 4inh:H (1.7) BS01 peptide 2.7.7.48
    3.4.22.66
    3.6.1.15
    GO:0004197 ... Q83883 23365454
    233294 4ini:A (1.65) BS01 AMP 3.9.1.- GO:0003824 ... Q9BX68 23659632
    233295 4ini:B (1.65) BS01 AMP 3.9.1.- GO:0003824 ... Q9BX68 23659632
    233296 4inj:A (2.4) BS01 LMS ? GO:0004180 ... Q8Y6P6 N/A
    233297 4inj:B (2.4) BS01 LMS ? GO:0004180 ... Q8Y6P6 N/A
    233298 4inq:A (2.2) BS01 PIF ? GO:0008289 ... P38713 23791945
    233299 4inr:H (2.7) BS01 1G1 3.4.25.1 GO:0004298 ... P25043 23320547
    233300 4inr:I (2.7) BS01 1G1 3.4.25.1 GO:0005515 ... P25451 23320547
    233301 4inr:K (2.7) BS01 1G1 3.4.25.1 GO:0004298 ... P30656 23320547
    233302 4inr:V (2.7) BS01 1G1 3.4.25.1 GO:0004298 ... P25043 23320547
    233303 4inr:W (2.7) BS01 1G1 3.4.25.1 GO:0005515 ... P25451 23320547
    233304 4inr:Y (2.7) BS01 1G1 3.4.25.1 GO:0004298 ... P30656 23320547
    233305 4inr:Z (2.7) BS01 1G1 3.4.25.1 GO:0003674 ... P23724 23320547
    233306 4ins:B (1.5) BS01 peptide ? GO:0005179 ... P01315 2905485
    233307 4ins:D (1.5) BS01 peptide ? GO:0005179 ... P01315 2905485
    233308 4int:H (2.9) BS01 1G5 3.4.25.1 GO:0004298 ... P25043 23320547
    233309 4int:I (2.9) BS01 1G5 3.4.25.1 GO:0005515 ... P25451 23320547
    233310 4int:K (2.9) BS01 1G5 3.4.25.1 GO:0004298 ... P30656 23320547
    233311 4int:V (2.9) BS01 1G5 3.4.25.1 GO:0004298 ... P25043 23320547
    233312 4int:W (2.9) BS01 1G5 3.4.25.1 GO:0005515 ... P25451 23320547
    233313 4int:Y (2.9) BS01 1G5 3.4.25.1 GO:0004298 ... P30656 23320547
    233314 4int:Z (2.9) BS01 1G5 3.4.25.1 GO:0003674 ... P23724 23320547
    233315 4inu:H (3.1) BS01 1G6 3.4.25.1 GO:0004298 ... P25043 23320547
    233316 4inu:I (3.1) BS01 1G6 3.4.25.1 GO:0005515 ... P25451 23320547
    233317 4inu:K (3.1) BS01 1G6 3.4.25.1 GO:0004298 ... P30656 23320547
    233318 4inu:L (3.1) BS01 1G6 3.4.25.1 GO:0003674 ... P23724 23320547
    233319 4inu:V (3.1) BS01 1G6 3.4.25.1 GO:0004298 ... P25043 23320547
    233320 4inu:W (3.1) BS01 1G6 3.4.25.1 GO:0005515 ... P25451 23320547
    233321 4inu:Y (3.1) BS01 1G6 3.4.25.1 GO:0004298 ... P30656 23320547
    233322 4inu:Z (3.1) BS01 1G6 3.4.25.1 GO:0003674 ... P23724 23320547
    233323 4inw:A (1.14) BS01 1EY ? GO:0005549 ... D0E9M1 23418423
    233324 4inx:A (1.853) BS01 1EX ? GO:0005549 ... D0E9M1 23418423
    233325 4io0:A (2.9) BS01 RN1 3.2.2.10 GO:0003824 ... G9BEX6 25331869
    233326 4io0:B (2.9) BS01 RN1 3.2.2.10 GO:0003824 ... G9BEX6 25331869
    233327 4io2:A (1.37) BS01 CL ? GO:0015276 ... E9P5T5 23434404
    233328 4io2:A (1.37) BS02 GLU ? GO:0015276 ... E9P5T5 23434404 MOAD: Kd=203nM
    233329 4io2:B (1.37) BS01 CL ? GO:0015276 ... E9P5T5 23434404
    233330 4io2:B (1.37) BS02 GLU ? GO:0015276 ... E9P5T5 23434404 MOAD: Kd=203nM
    233331 4io3:A (1.66) BS01 ASP ? GO:0015276 ... E9P5T5 23434404 MOAD: Kd=875nM
    233332 4io3:A (1.66) BS02 CL ? GO:0015276 ... E9P5T5 23434404
    233333 4io3:B (1.66) BS01 ASP ? GO:0015276 ... E9P5T5 23434404 MOAD: Kd=875nM
    233334 4io3:B (1.66) BS02 CL ? GO:0015276 ... E9P5T5 23434404
    233335 4io4:A (1.941) BS01 SER ? GO:0015276 ... E9P5T5 23434404 MOAD: Kd=24uM
    233336 4io4:A (1.941) BS02 CL ? GO:0015276 ... E9P5T5 23434404
    233337 4io4:A (1.941) BS03 CL ? GO:0015276 ... E9P5T5 23434404
    233338 4io4:A (1.941) BS04 CL ? GO:0015276 ... E9P5T5 23434404
    233339 4io4:B (1.941) BS01 SER ? GO:0015276 ... E9P5T5 23434404 MOAD: Kd=24uM
    233340 4io4:B (1.941) BS02 CL ? GO:0015276 ... E9P5T5 23434404
    233341 4io4:B (1.941) BS03 CL ? GO:0015276 ... E9P5T5 23434404
    233342 4io5:A (1.721) BS01 ALA ? GO:0015276 ... E9P5T5 23434404 MOAD: Kd=9uM
    233343 4io5:A (1.721) BS02 CL ? GO:0015276 ... E9P5T5 23434404
    233344 4io5:A (1.721) BS03 CL ? GO:0015276 ... E9P5T5 23434404
    233345 4io5:A (1.721) BS04 CL ? GO:0015276 ... E9P5T5 23434404
    233346 4io5:B (1.721) BS01 ALA ? GO:0015276 ... E9P5T5 23434404 MOAD: Kd=9uM
    233347 4io5:B (1.721) BS02 CL ? GO:0015276 ... E9P5T5 23434404
    233348 4io5:B (1.721) BS03 CL ? GO:0015276 ... E9P5T5 23434404
    233349 4io6:A (1.6) BS01 MET ? GO:0015276 ... E9P5T5 23434404 MOAD: Kd=15uM
    233350 4io6:A (1.6) BS02 CL ? GO:0015276 ... E9P5T5 23434404
    233351 4io6:A (1.6) BS03 CL ? GO:0015276 ... E9P5T5 23434404
    233352 4io6:A (1.6) BS04 CL ? GO:0015276 ... E9P5T5 23434404
    233353 4io6:B (1.6) BS01 MET ? GO:0015276 ... E9P5T5 23434404 MOAD: Kd=15uM
    233354 4io6:B (1.6) BS02 CL ? GO:0015276 ... E9P5T5 23434404
    233355 4io6:B (1.6) BS03 CL ? GO:0015276 ... E9P5T5 23434404
    233356 4io7:A (1.92) BS01 PHE ? GO:0015276 ... E9P5T5 23434404
    233357 4io7:A (1.92) BS02 CL ? GO:0015276 ... E9P5T5 23434404
    233358 4io7:B (1.92) BS01 PHE ? GO:0015276 ... E9P5T5 23434404
    233359 4io7:B (1.92) BS02 CL ? GO:0015276 ... E9P5T5 23434404
    233360 4io8:A (2.58) BS01 3FD ? GO:0005524 ... P0DMV8 24265689 BindingDB: Kd=3e+2nM, Ki=1.2e+2nM, IC50=500nM
    233361 4io9:1 (3.2) BS01 rna ? GO:0003735 ... Q9RSS4 23414806
    233362 4io9:4 (3.2) BS01 rna ? GO:0003735 ... Q9RSK0 23414806
    233363 4io9:A (3.2) BS01 rna ? GO:0002181 ... Q9RXJ9 23414806
    233364 4io9:B (3.2) BS01 rna ? GO:0003735 ... Q9RXK2 23414806
    233365 4io9:C (3.2) BS01 rna ? GO:0003735 ... Q9RXK1 23414806
    233366 4io9:D (3.2) BS01 rna ? GO:0000049 ... Q9RXJ0 23414806
    233367 4io9:D (3.2) BS02 rna ? GO:0000049 ... Q9RXJ0 23414806
    233368 4io9:E (3.2) BS01 rna ? GO:0002181 ... Q9RSL3 23414806
    233369 4io9:F (3.2) BS01 rna ? GO:0003735 ... Q9RSS7 23414806
    233370 4io9:G (3.2) BS01 rna ? GO:0003729 ... Q9RXY1 23414806
    233371 4io9:H (3.2) BS01 rna ? GO:0003735 ... Q9RXJ2 23414806
    233372 4io9:I (3.2) BS01 rna ? GO:0003735 ... Q9RSK9 23414806
    233373 4io9:J (3.2) BS01 rna ? GO:0003735 ... Q9RXJ5 23414806
    233374 4io9:J (3.2) BS02 rna ? GO:0003735 ... Q9RXJ5 23414806
    233375 4io9:K (3.2) BS01 rna ? GO:0003735 ... Q9RSJ5 23414806
    233376 4io9:L (3.2) BS01 rna ? GO:0003735 ... Q9RSL2 23414806
    233377 4io9:L (3.2) BS02 rna ? GO:0003735 ... Q9RSL2 23414806
    233378 4io9:M (3.2) BS01 rna ? GO:0003735 ... Q9RWB4 23414806
    233379 4io9:N (3.2) BS01 rna ? GO:0000027 ... Q9RSW7 23414806
    233380 4io9:O (3.2) BS01 rna ? GO:0003723 ... Q9RY64 23414806
    233381 4io9:P (3.2) BS01 rna ? GO:0003735 ... Q9RXJ7 23414806
    233382 4io9:Q (3.2) BS01 rna ? GO:0003735 ... Q9RXK0 23414806
    233383 4io9:R (3.2) BS01 rna ? GO:0003723 ... Q9RXJ1 23414806
    233384 4io9:S (3.2) BS01 rna ? GO:0003723 ... Q9RX88 23414806
    233385 4io9:S (3.2) BS02 rna ? GO:0003723 ... Q9RX88 23414806
    233386 4io9:T (3.2) BS01 rna ? GO:0003735 ... Q9RY65 23414806
    233387 4io9:U (3.2) BS01 rna ? GO:0003735 ... Q9RRG8 23414806
    233388 4io9:V (3.2) BS01 rna ? GO:0003735 ... Q9RXJ4 23414806
    233389 4io9:W (3.2) BS01 rna ? GO:0003735 ... Q9RSL0 23414806
    233390 4io9:W (3.2) BS02 rna ? GO:0003735 ... Q9RSL0 23414806
    233391 4io9:Z (3.2) BS01 rna ? GO:0003735 ... P49228 23414806
    233392 4ioa:2 (3.2) BS01 rna ? GO:0003735 ... Q9RSH2 23414806
    233393 4ioa:3 (3.2) BS01 rna ? GO:0003735 ... Q9RSW6 23414806
    233394 4ioa:4 (3.2) BS01 rna ? GO:0003735 ... Q9RSK0 23414806
    233395 4ioa:A (3.2) BS01 rna ? GO:0002181 ... Q9RXJ9 23414806
    233396 4ioa:B (3.2) BS01 rna ? GO:0003735 ... Q9RXK2 23414806
    233397 4ioa:C (3.2) BS01 rna ? GO:0003735 ... Q9RXK1 23414806
    233398 4ioa:D (3.2) BS01 rna ? GO:0000049 ... Q9RXJ0 23414806
    233399 4ioa:D (3.2) BS02 rna ? GO:0000049 ... Q9RXJ0 23414806
    233400 4ioa:E (3.2) BS01 rna ? GO:0002181 ... Q9RSL3 23414806

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).