SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    233601 4ir1:F (2.38) BS02 dna 2.7.7.7 GO:0000287 ... Q47155 23525461
    233602 4ir1:F (2.38) BS03 1FZ 2.7.7.7 GO:0000287 ... Q47155 23525461
    233603 4ir1:F (2.38) BS04 MG 2.7.7.7 GO:0000287 ... Q47155 23525461
    233604 4ir1:F (2.38) BS05 MG 2.7.7.7 GO:0000287 ... Q47155 23525461
    233605 4ir3:A (2.0) BS01 1FK ? N/A Q9UIF8 25799074
    233606 4ir4:A (2.05) BS01 IR4 ? N/A Q9UIF8 25799074
    233607 4ir5:A (1.7) BS01 IR5 ? N/A Q9UIF8 25799074 BindingDB: IC50=610nM
    233608 4ir6:A (1.8) BS01 IR6 ? N/A Q9UIF8 25799074 BindingDB: IC50=840nM
    233609 4ir7:A (2.8) BS01 1ZZ N/A N/A N/A 23625916
    233610 4ir9:A (2.33) BS01 dna 2.7.7.7 GO:0000287 ... Q47155 23525461
    233611 4ir9:A (2.33) BS02 dna 2.7.7.7 GO:0000287 ... Q47155 23525461
    233612 4ir9:A (2.33) BS03 XG4 2.7.7.7 GO:0000287 ... Q47155 23525461
    233613 4ir9:A (2.33) BS04 MG 2.7.7.7 GO:0000287 ... Q47155 23525461
    233614 4ir9:A (2.33) BS05 MG 2.7.7.7 GO:0000287 ... Q47155 23525461
    233615 4ir9:F (2.33) BS01 dna 2.7.7.7 GO:0000287 ... Q47155 23525461
    233616 4ir9:F (2.33) BS02 dna 2.7.7.7 GO:0000287 ... Q47155 23525461
    233617 4ir9:F (2.33) BS03 XG4 2.7.7.7 GO:0000287 ... Q47155 23525461
    233618 4ir9:F (2.33) BS04 MG 2.7.7.7 GO:0000287 ... Q47155 23525461
    233619 4ir9:F (2.33) BS05 MG 2.7.7.7 GO:0000287 ... Q47155 23525461
    233620 4ira:A (2.2) BS01 FAD 1.14.14.9 GO:0006208 ... Q8YHT7 N/A
    233621 4irc:A (2.67) BS01 dna 2.7.7.7 GO:0000287 ... Q47155 23525461
    233622 4irc:A (2.67) BS02 dna 2.7.7.7 GO:0000287 ... Q47155 23525461
    233623 4irc:A (2.67) BS03 dna 2.7.7.7 GO:0000287 ... Q47155 23525461
    233624 4irc:A (2.67) BS04 0KX 2.7.7.7 GO:0000287 ... Q47155 23525461
    233625 4irc:A (2.67) BS05 MG 2.7.7.7 GO:0000287 ... Q47155 23525461
    233626 4irc:A (2.67) BS06 MG 2.7.7.7 GO:0000287 ... Q47155 23525461
    233627 4irc:F (2.67) BS01 dna 2.7.7.7 GO:0000287 ... Q47155 23525461
    233628 4irc:F (2.67) BS02 dna 2.7.7.7 GO:0000287 ... Q47155 23525461
    233629 4irc:F (2.67) BS03 0KX 2.7.7.7 GO:0000287 ... Q47155 23525461
    233630 4irc:F (2.67) BS04 MG 2.7.7.7 GO:0000287 ... Q47155 23525461
    233631 4irc:F (2.67) BS05 MG 2.7.7.7 GO:0000287 ... Q47155 23525461
    233632 4ird:A (2.48) BS01 dna 2.7.7.7 GO:0000287 ... Q47155 23525461
    233633 4ird:A (2.48) BS02 dna 2.7.7.7 GO:0000287 ... Q47155 23525461
    233634 4ird:A (2.48) BS03 dna 2.7.7.7 GO:0000287 ... Q47155 23525461
    233635 4ird:A (2.48) BS04 DZ4 2.7.7.7 GO:0000287 ... Q47155 23525461
    233636 4ird:A (2.48) BS05 MG 2.7.7.7 GO:0000287 ... Q47155 23525461
    233637 4ird:A (2.48) BS06 MG 2.7.7.7 GO:0000287 ... Q47155 23525461
    233638 4ird:F (2.48) BS01 dna 2.7.7.7 GO:0000287 ... Q47155 23525461
    233639 4ird:F (2.48) BS02 dna 2.7.7.7 GO:0000287 ... Q47155 23525461
    233640 4ird:F (2.48) BS03 DZ4 2.7.7.7 GO:0000287 ... Q47155 23525461
    233641 4ird:F (2.48) BS04 MG 2.7.7.7 GO:0000287 ... Q47155 23525461
    233642 4ird:F (2.48) BS05 MG 2.7.7.7 GO:0000287 ... Q47155 23525461
    233643 4ire:A (3.19) BS01 LMD ? GO:0004888 ... Q7NDN8 23667707
    233644 4ire:A (3.19) BS02 OXL ? GO:0004888 ... Q7NDN8 23667707
    233645 4ire:A (3.19) BS03 OXL ? GO:0004888 ... Q7NDN8 23667707
    233646 4ire:A (3.19) BS04 OXL ? GO:0004888 ... Q7NDN8 23667707
    233647 4ire:A (3.19) BS05 LMD ? GO:0004888 ... Q7NDN8 23667707
    233648 4ire:B (3.19) BS01 LMD ? GO:0004888 ... Q7NDN8 23667707
    233649 4ire:B (3.19) BS02 OXL ? GO:0004888 ... Q7NDN8 23667707
    233650 4ire:B (3.19) BS03 OXL ? GO:0004888 ... Q7NDN8 23667707
    233651 4ire:B (3.19) BS04 LMD ? GO:0004888 ... Q7NDN8 23667707
    233652 4ire:C (3.19) BS01 LMD ? GO:0004888 ... Q7NDN8 23667707
    233653 4ire:C (3.19) BS02 LMD ? GO:0004888 ... Q7NDN8 23667707
    233654 4ire:C (3.19) BS03 OXL ? GO:0004888 ... Q7NDN8 23667707
    233655 4ire:C (3.19) BS04 OXL ? GO:0004888 ... Q7NDN8 23667707
    233656 4ire:D (3.19) BS01 OXL ? GO:0004888 ... Q7NDN8 23667707
    233657 4ire:D (3.19) BS02 OXL ? GO:0004888 ... Q7NDN8 23667707
    233658 4ire:D (3.19) BS03 OXL ? GO:0004888 ... Q7NDN8 23667707
    233659 4ire:D (3.19) BS04 OXL ? GO:0004888 ... Q7NDN8 23667707
    233660 4ire:D (3.19) BS05 LMD ? GO:0004888 ... Q7NDN8 23667707
    233661 4ire:D (3.19) BS06 OXL ? GO:0004888 ... Q7NDN8 23667707
    233662 4ire:E (3.19) BS01 OXL ? GO:0004888 ... Q7NDN8 23667707
    233663 4ire:E (3.19) BS02 LMD ? GO:0004888 ... Q7NDN8 23667707
    233664 4ire:E (3.19) BS03 LMD ? GO:0004888 ... Q7NDN8 23667707
    233665 4ire:E (3.19) BS04 OXL ? GO:0004888 ... Q7NDN8 23667707
    233666 4ire:E (3.19) BS05 OXL ? GO:0004888 ... Q7NDN8 23667707
    233667 4ire:E (3.19) BS06 OXL ? GO:0004888 ... Q7NDN8 23667707
    233668 4iri:A (2.77) BS01 dna ? GO:0003700 ... P11308 23898196
    233669 4iri:A (2.77) BS02 dna ? GO:0003700 ... P11308 23898196
    233670 4irj:A (3.0) BS01 FUC ? N/A P11609 23960235
    233671 4irj:A (3.0) BS02 1L9 ? N/A P11609 23960235
    233672 4irj:C (3.0) BS01 1L9 N/A N/A N/A 23960235
    233673 4irk:A (2.32) BS01 dna 2.7.7.7 GO:0000287 ... Q47155 23525461
    233674 4irk:A (2.32) BS02 dna 2.7.7.7 GO:0000287 ... Q47155 23525461
    233675 4irk:A (2.32) BS03 DCP 2.7.7.7 GO:0000287 ... Q47155 23525461
    233676 4irk:A (2.32) BS04 MG 2.7.7.7 GO:0000287 ... Q47155 23525461
    233677 4irk:B (2.32) BS01 dna 2.7.7.7 GO:0000287 ... Q47155 23525461
    233678 4irk:B (2.32) BS02 dna 2.7.7.7 GO:0000287 ... Q47155 23525461
    233679 4irk:B (2.32) BS03 dna 2.7.7.7 GO:0000287 ... Q47155 23525461
    233680 4irk:B (2.32) BS04 DCP 2.7.7.7 GO:0000287 ... Q47155 23525461
    233681 4irk:B (2.32) BS05 MG 2.7.7.7 GO:0000287 ... Q47155 23525461
    233682 4irl:A (1.47) BS01 GLC ? GO:0005515 ... B0V1H4
    P0AEX9
    23908027
    233683 4irl:A (1.47) BS02 GLC ? GO:0005515 ... B0V1H4
    P0AEX9
    23908027
    233684 4irl:A (1.47) BS03 GLC ? GO:0005515 ... B0V1H4
    P0AEX9
    23908027
    233685 4irl:A (1.47) BS04 GLC ? GO:0005515 ... B0V1H4
    P0AEX9
    23908027
    233686 4irl:B (1.47) BS01 GLC ? GO:0005515 ... B0V1H4
    P0AEX9
    23908027
    233687 4irl:B (1.47) BS02 GLC ? GO:0005515 ... B0V1H4
    P0AEX9
    23908027
    233688 4irl:B (1.47) BS03 GLC ? GO:0005515 ... B0V1H4
    P0AEX9
    23908027
    233689 4irl:B (1.47) BS04 GLC ? GO:0005515 ... B0V1H4
    P0AEX9
    23908027
    233690 4irl:C (1.47) BS01 GLC ? GO:0005515 ... B0V1H4
    P0AEX9
    23908027
    233691 4irl:C (1.47) BS02 GLC ? GO:0005515 ... B0V1H4
    P0AEX9
    23908027
    233692 4irl:C (1.47) BS03 GLC ? GO:0005515 ... B0V1H4
    P0AEX9
    23908027
    233693 4irl:C (1.47) BS04 GLC ? GO:0005515 ... B0V1H4
    P0AEX9
    23908027
    233694 4irm:A (3.5) BS01 MN ? GO:0007155 ... Q79EF9 23519795
    233695 4irm:B (3.5) BS01 MN ? GO:0007155 ... Q79EF9 23519795
    233696 4irm:C (3.5) BS01 MN ? GO:0007155 ... Q79EF9 23519795
    233697 4irn:A (2.8) BS01 FAD 1.3.99.- GO:0003995 ... C4NCB7 24311576
    233698 4irn:A (2.8) BS02 FAD 1.3.99.- GO:0003995 ... C4NCB7 24311576
    233699 4irn:B (2.8) BS01 FAD 1.3.99.- GO:0003995 ... C4NCB7 24311576
    233700 4irn:B (2.8) BS02 FAD 1.3.99.- GO:0003995 ... C4NCB7 24311576
    233701 4irn:C (2.8) BS01 FAD 1.3.99.- GO:0003995 ... C4NCB7 24311576
    233702 4irn:C (2.8) BS02 FAD 1.3.99.- GO:0003995 ... C4NCB7 24311576
    233703 4irn:D (2.8) BS01 FAD 1.3.99.- GO:0003995 ... C4NCB7 24311576
    233704 4irn:D (2.8) BS02 FAD 1.3.99.- GO:0003995 ... C4NCB7 24311576
    233705 4irn:E (2.8) BS01 FAD 1.3.99.- GO:0003995 ... C4NCB7 24311576
    233706 4irn:E (2.8) BS02 FAD 1.3.99.- GO:0003995 ... C4NCB7 24311576
    233707 4irn:F (2.8) BS01 FAD 1.3.99.- GO:0003995 ... C4NCB7 24311576
    233708 4irn:F (2.8) BS02 FAD 1.3.99.- GO:0003995 ... C4NCB7 24311576
    233709 4irn:G (2.8) BS01 FAD 1.3.99.- GO:0003995 ... C4NCB7 24311576
    233710 4irn:G (2.8) BS02 FAD 1.3.99.- GO:0003995 ... C4NCB7 24311576
    233711 4irn:H (2.8) BS01 FAD 1.3.99.- GO:0003995 ... C4NCB7 24311576
    233712 4irn:H (2.8) BS02 FAD 1.3.99.- GO:0003995 ... C4NCB7 24311576
    233713 4iro:A (2.2) BS01 HEM ? GO:0004601 ... P80043 23376186
    233714 4iro:B (2.2) BS01 HEM ? GO:0004601 ... P80044 23376186
    233715 4iro:C (2.2) BS01 HEM ? GO:0004601 ... P80043 23376186
    233716 4iro:D (2.2) BS01 HEM ? GO:0004601 ... P80044 23376186
    233717 4irp:A (2.1) BS01 UDP 2.4.1.-
    2.4.1.133
    GO:0005975 ... Q9UBV7 24052259
    233718 4irp:A (2.1) BS02 MN 2.4.1.-
    2.4.1.133
    GO:0005975 ... Q9UBV7 24052259
    233719 4irp:B (2.1) BS01 UDP 2.4.1.-
    2.4.1.133
    GO:0005975 ... Q9UBV7 24052259
    233720 4irp:B (2.1) BS02 MN 2.4.1.-
    2.4.1.133
    GO:0005975 ... Q9UBV7 24052259
    233721 4irq:A (2.3) BS01 MN 2.4.1.-
    2.4.1.133
    GO:0005975 ... Q9UBV7 24052259
    233722 4irq:A (2.3) BS02 UDP 2.4.1.-
    2.4.1.133
    GO:0005975 ... Q9UBV7 24052259
    233723 4irq:B (2.3) BS01 MN 2.4.1.-
    2.4.1.133
    GO:0005975 ... Q9UBV7 24052259
    233724 4irq:B (2.3) BS02 UDP 2.4.1.-
    2.4.1.133
    GO:0005975 ... Q9UBV7 24052259
    233725 4irq:C (2.3) BS01 MN 2.4.1.-
    2.4.1.133
    GO:0005975 ... Q9UBV7 24052259
    233726 4irq:C (2.3) BS02 UDP 2.4.1.-
    2.4.1.133
    GO:0005975 ... Q9UBV7 24052259
    233727 4irq:D (2.3) BS01 MN 2.4.1.-
    2.4.1.133
    GO:0005975 ... Q9UBV7 24052259
    233728 4irq:D (2.3) BS02 UDP 2.4.1.-
    2.4.1.133
    GO:0005975 ... Q9UBV7 24052259
    233729 4irr:A (2.48) BS01 UMP 2.1.1.45 GO:0004799 ... Q9Y052 N/A
    233730 4irr:A (2.48) BS02 UMP 2.1.1.45 GO:0004799 ... Q9Y052 N/A
    233731 4irr:B (2.48) BS01 UMP 2.1.1.45 GO:0004799 ... Q9Y052 N/A
    233732 4irr:B (2.48) BS02 UMP 2.1.1.45 GO:0004799 ... Q9Y052 N/A
    233733 4irs:A (2.8) BS01 FUL ? N/A P11609 23960235
    233734 4irs:A (2.8) BS02 1LA ? N/A P11609 23960235
    233735 4irs:C (2.8) BS01 1LA ? N/A P01848 23960235
    233736 4iru:B (3.2) BS01 MG 3.6.5.2 GO:0003924 ... P62820 23821544
    233737 4iru:B (3.2) BS02 GDP 3.6.5.2 GO:0003924 ... P62820 23821544
    233738 4iru:B (3.2) BS03 AF3 3.6.5.2 GO:0003924 ... P62820 23821544
    233739 4iru:C (3.2) BS01 GDP 3.6.5.2 N/A Q5ZSM7 23821544
    233740 4iru:D (3.2) BS01 MG 3.6.5.2 GO:0003924 ... P62820 23821544
    233741 4iru:D (3.2) BS02 GDP 3.6.5.2 GO:0003924 ... P62820 23821544
    233742 4iru:D (3.2) BS03 AF3 3.6.5.2 GO:0003924 ... P62820 23821544
    233743 4iru:F (3.2) BS01 MG 3.6.5.2 GO:0003924 ... P62820 23821544
    233744 4iru:F (3.2) BS02 GDP 3.6.5.2 GO:0003924 ... P62820 23821544
    233745 4iru:F (3.2) BS03 AF3 3.6.5.2 GO:0003924 ... P62820 23821544
    233746 4irv:A (2.04) BS01 peptide ? GO:0019534 ... P55980 24474782
    233747 4irv:B (2.04) BS01 peptide ? GO:0019534 ... P55980 24474782
    233748 4irv:C (2.04) BS01 peptide ? GO:0019534 ... P55980 24474782
    233749 4irv:D (2.04) BS01 peptide ? GO:0019534 ... P55980 24474782
    233750 4irw:A (1.396) BS01 PDC ? GO:0009374 ... P22629 N/A
    233751 4irw:A (1.396) BS02 PDC ? GO:0009374 ... P22629 N/A
    233752 4irw:A (1.396) BS03 PDC ? GO:0009374 ... P22629 N/A
    233753 4irw:A (1.396) BS04 PDC ? GO:0009374 ... P22629 N/A
    233754 4irw:A (1.396) BS05 PDC ? GO:0009374 ... P22629 N/A
    233755 4irw:A (1.396) BS06 PDC ? GO:0009374 ... P22629 N/A
    233756 4irw:A (1.396) BS07 PDC ? GO:0009374 ... P22629 N/A
    233757 4irw:A (1.396) BS08 BTN ? GO:0009374 ... P22629 N/A BindingDB: Kd=1.000000nM
    233758 4irx:A (1.451) BS01 INS ? N/A A0A0H3C834 23504019 MOAD: Kd=0.76uM
    233759 4irx:B (1.451) BS01 INS ? N/A A0A0H3C834 23504019 MOAD: Kd=0.76uM
    233760 4irz:A (2.84) BS01 CA ? GO:0007155 ... G1TY34 24047894
    233761 4irz:A (2.84) BS02 CA ? GO:0007155 ... G1TY34 24047894
    233762 4irz:A (2.84) BS03 CA ? GO:0007155 ... G1TY34 24047894
    233763 4irz:A (2.84) BS04 NDS ? GO:0007155 ... G1TY34 24047894
    233764 4is0:A (1.721) BS01 GDS 1.20.4.2
    1.8.5.1
    2.5.1.18
    GO:0004364 ... P78417 23593192
    233765 4is0:A (1.721) BS02 1R4 1.20.4.2
    1.8.5.1
    2.5.1.18
    GO:0004364 ... P78417 23593192
    233766 4is1:C (2.1) BS01 dna ? N/A O75362 23436653
    233767 4is1:C (2.1) BS02 dna ? N/A O75362 23436653
    233768 4is1:C (2.1) BS03 ZN ? N/A O75362 23436653
    233769 4is1:C (2.1) BS04 ZN ? N/A O75362 23436653
    233770 4is1:D (2.1) BS01 dna ? N/A O75362 23436653
    233771 4is1:D (2.1) BS02 dna ? N/A O75362 23436653
    233772 4is1:D (2.1) BS03 ZN ? N/A O75362 23436653
    233773 4is1:D (2.1) BS04 ZN ? N/A O75362 23436653
    233774 4is3:A (2.0) BS01 NAD 1.1.1.395 GO:0005737 ... P19337 N/A
    233775 4is3:B (2.0) BS01 NAD 1.1.1.395 GO:0005737 ... P19337 N/A
    233776 4is3:C (2.0) BS01 NAD 1.1.1.395 GO:0005737 ... P19337 N/A
    233777 4is3:D (2.0) BS01 NAD 1.1.1.395 GO:0005737 ... P19337 N/A
    233778 4is5:A (1.48) BS01 GSH 3.4.21.109 GO:0004252 ... Q9Y5Y6 23443661
    233779 4is6:A (2.5) BS01 peptide ? GO:0006955 ... P01903 24108701
    233780 4is6:B (2.5) BS01 peptide ? GO:0006955 ... P01911 24108701
    233781 4is9:A (2.13) BS01 ZN N/A GO:0009245 ... N/A 24117400
    233782 4is9:A (2.13) BS02 LTF N/A GO:0009245 ... N/A 24117400
    233783 4is9:B (2.13) BS01 ZN N/A GO:0009245 ... N/A 24117400
    233784 4is9:B (2.13) BS02 LTF N/A GO:0009245 ... N/A 24117400
    233785 4isa:A (1.8) BS01 ZN N/A GO:0009245 ... N/A 24117400
    233786 4isa:A (1.8) BS02 GVR N/A GO:0009245 ... N/A 24117400
    233787 4isa:A (1.8) BS03 GVR N/A GO:0009245 ... N/A 24117400
    233788 4isd:A (2.65) BS01 GSH ? N/A N/A N/A
    233789 4isd:B (2.65) BS01 GSH ? N/A N/A N/A
    233790 4isd:C (2.65) BS01 GSH ? N/A N/A N/A
    233791 4isd:D (2.65) BS01 GSH ? N/A N/A N/A
    233792 4isd:E (2.65) BS01 GSH ? N/A N/A N/A
    233793 4ise:A (1.78) BS01 GLC 2.7.1.1 GO:0001678 ... P35557 23434031
    233794 4ise:A (1.78) BS02 1FW 2.7.1.1 GO:0001678 ... P35557 23434031 BindingDB: EC50=4000nM
    233795 4isf:A (2.09) BS01 GLC 2.7.1.1 GO:0001678 ... P35557 23434031
    233796 4isf:A (2.09) BS02 1FX 2.7.1.1 GO:0001678 ... P35557 23434031 BindingDB: EC50=3100nM
    233797 4isg:A (2.645) BS01 GLC 2.7.1.1 GO:0001678 ... P35557 23434031
    233798 4isg:A (2.645) BS02 1FY 2.7.1.1 GO:0001678 ... P35557 23434031 BindingDB: EC50=1600nM
    233799 4ish:H (1.82) BS01 1GE 3.4.21.21 GO:0004252 ... P08709 23478148 MOAD: Ki=1.9nM
    BindingDB: Ki=1.9nM
    233800 4ish:H (1.82) BS02 CA 3.4.21.21 GO:0004252 ... P08709 23478148

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).