SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    239601 4kfs:A (1.946) BS01 AMP 3.-.-.- GO:0000166 ... D5IEZ9 23698307
    239602 4kfs:A (1.946) BS02 ZN 3.-.-.- GO:0000166 ... D5IEZ9 23698307
    239603 4kft:A (2.241) BS01 AGS 3.-.-.- GO:0000166 ... D5IEZ9 23698307
    239604 4kft:A (2.241) BS02 AGS 3.-.-.- GO:0000166 ... D5IEZ9 23698307
    239605 4kft:B (2.241) BS01 AGS 3.-.-.- GO:0000166 ... D5IEZ9 23698307
    239606 4kft:B (2.241) BS02 AGS 3.-.-.- GO:0000166 ... D5IEZ9 23698307
    239607 4kft:B (2.241) BS03 ZN 3.-.-.- GO:0000166 ... D5IEZ9 23698307
    239608 4kft:C (2.241) BS01 AGS 3.-.-.- GO:0000166 ... D5IEZ9 23698307
    239609 4kft:C (2.241) BS02 AGS 3.-.-.- GO:0000166 ... D5IEZ9 23698307
    239610 4kft:C (2.241) BS03 ZN 3.-.-.- GO:0000166 ... D5IEZ9 23698307
    239611 4kft:D (2.241) BS01 AGS 3.-.-.- GO:0000166 ... D5IEZ9 23698307
    239612 4kfu:A (1.892) BS01 ACP 3.-.-.- GO:0000166 ... D5IEZ9 23698307
    239613 4kfu:A (1.892) BS02 ACP 3.-.-.- GO:0000166 ... D5IEZ9 23698307
    239614 4kfu:A (1.892) BS03 ZN 3.-.-.- GO:0000166 ... D5IEZ9 23698307
    239615 4kfu:B (1.892) BS01 ACP 3.-.-.- GO:0000166 ... D5IEZ9 23698307
    239616 4kfu:B (1.892) BS02 ACP 3.-.-.- GO:0000166 ... D5IEZ9 23698307
    239617 4kfu:B (1.892) BS03 ZN 3.-.-.- GO:0000166 ... D5IEZ9 23698307
    239618 4kfu:C (1.892) BS01 ACP 3.-.-.- GO:0000166 ... D5IEZ9 23698307
    239619 4kfu:D (1.892) BS01 ACP 3.-.-.- GO:0000166 ... D5IEZ9 23698307
    239620 4kfv:A (2.2) BS01 ZN ? N/A O35254 23940043
    239621 4kfz:A (2.8) BS01 ZN ? GO:0001221 ... P25791 24407558
    239622 4kfz:A (2.8) BS02 ZN ? GO:0001221 ... P25791 24407558
    239623 4kfz:A (2.8) BS03 ZN ? GO:0001221 ... P25791 24407558
    239624 4kfz:A (2.8) BS04 ZN ? GO:0001221 ... P25791 24407558
    239625 4kfz:B (2.8) BS01 ZN ? GO:0001221 ... P25791 24407558
    239626 4kfz:B (2.8) BS02 ZN ? GO:0001221 ... P25791 24407558
    239627 4kfz:B (2.8) BS03 ZN ? GO:0001221 ... P25791 24407558
    239628 4kfz:B (2.8) BS04 ZN ? GO:0001221 ... P25791 24407558
    239629 4kg0:A (2.1) BS01 MG ? N/A P29503 N/A
    239630 4kg2:A (1.89) BS01 CEF 3.5.2.6 GO:0008800 ... P00811 N/A
    239631 4kg2:B (1.89) BS01 CEF 3.5.2.6 GO:0008800 ... P00811 N/A
    239632 4kg5:A (2.11) BS01 CEF 3.5.2.6 GO:0008800 ... P00811 N/A
    239633 4kg5:B (2.11) BS01 CEF 3.5.2.6 GO:0008800 ... P00811 N/A
    239634 4kg5:C (2.11) BS01 CEF 3.5.2.6 GO:0008800 ... P00811 N/A
    239635 4kg5:D (2.11) BS01 CEF 3.5.2.6 GO:0008800 ... P00811 N/A
    239636 4kg9:A (1.7) BS01 peptide 3.4.19.12 N/A Q93009 24190967
    239637 4kga:A (2.32) BS01 NI 3.4.21.- GO:0004252 ... Q9Y5K2 27767076
    239638 4kga:A (2.32) BS02 NI 3.4.21.- GO:0004252 ... Q9Y5K2 27767076
    239639 4kga:B (2.32) BS01 NI 3.4.21.- GO:0004252 ... Q9Y5K2 27767076
    239640 4kga:B (2.32) BS02 NI 3.4.21.- GO:0004252 ... Q9Y5K2 27767076
    239641 4kgc:A (2.69) BS01 dna ? GO:0000786 ... P84233 24637564
    239642 4kgc:A (2.69) BS02 dna ? GO:0000786 ... P84233 24637564
    239643 4kgc:B (2.69) BS01 dna ? GO:0000786 ... P62799 24637564
    239644 4kgc:B (2.69) BS02 dna ? GO:0000786 ... P62799 24637564
    239645 4kgc:C (2.69) BS01 dna ? GO:0000786 ... Q6AZJ8 24637564
    239646 4kgc:C (2.69) BS02 dna ? GO:0000786 ... Q6AZJ8 24637564
    239647 4kgc:D (2.69) BS01 dna ? GO:0000786 ... P02281 24637564
    239648 4kgc:D (2.69) BS02 dna ? GO:0000786 ... P02281 24637564
    239649 4kgc:E (2.69) BS01 dna ? GO:0000786 ... P84233 24637564
    239650 4kgc:E (2.69) BS02 dna ? GO:0000786 ... P84233 24637564
    239651 4kgc:F (2.69) BS01 dna ? GO:0000786 ... P62799 24637564
    239652 4kgc:F (2.69) BS02 dna ? GO:0000786 ... P62799 24637564
    239653 4kgc:G (2.69) BS01 dna ? GO:0000786 ... Q6AZJ8 24637564
    239654 4kgc:G (2.69) BS02 dna ? GO:0000786 ... Q6AZJ8 24637564
    239655 4kgc:G (2.69) BS03 HRU ? GO:0000786 ... Q6AZJ8 24637564
    239656 4kgc:H (2.69) BS01 dna ? GO:0000786 ... P02281 24637564
    239657 4kgc:H (2.69) BS02 dna ? GO:0000786 ... P02281 24637564
    239658 4kgd:A (1.06) BS01 FAD N/A GO:0000287 ... N/A 23748673
    239659 4kgd:A (1.06) BS02 MG N/A GO:0000287 ... N/A 23748673
    239660 4kgd:A (1.06) BS03 TPP N/A GO:0000287 ... N/A 23748673
    239661 4kgd:B (1.06) BS01 FAD N/A GO:0000287 ... N/A 23748673
    239662 4kgd:B (1.06) BS02 MG N/A GO:0000287 ... N/A 23748673
    239663 4kgd:B (1.06) BS03 TPP N/A GO:0000287 ... N/A 23748673
    239664 4kgg:C (2.78) BS01 MG ? N/A O95407 25087510
    239665 4kgg:D (2.78) BS01 MG ? N/A O95407 25087510
    239666 4kgi:A (1.6) BS01 GSH N/A N/A N/A N/A
    239667 4kgi:B (1.6) BS01 GSH N/A N/A N/A N/A
    239668 4kgi:C (1.6) BS01 GSH N/A N/A N/A N/A
    239669 4kgi:D (1.6) BS01 GSH N/A N/A N/A N/A
    239670 4kgj:A (2.99) BS01 IDF 3.2.1.76 GO:0004553 ... P35475 24036510
    239671 4kgj:B (2.99) BS01 MAN 3.2.1.76 GO:0004553 ... P35475 24036510
    239672 4kgj:B (2.99) BS02 IDF 3.2.1.76 GO:0004553 ... P35475 24036510
    239673 4kgk:A (2.95) BS01 GTP N/A GO:0000287 ... N/A 23844012
    239674 4kgk:A (2.95) BS02 MG N/A GO:0000287 ... N/A 23844012
    239675 4kgk:A (2.95) BS03 MG N/A GO:0000287 ... N/A 23844012
    239676 4kgk:B (2.95) BS01 GTP N/A GO:0000287 ... N/A 23844012
    239677 4kgk:B (2.95) BS02 GTP N/A GO:0000287 ... N/A 23844012
    239678 4kgk:B (2.95) BS03 MG N/A GO:0000287 ... N/A 23844012
    239679 4kgk:B (2.95) BS04 MG N/A GO:0000287 ... N/A 23844012
    239680 4kgk:C (2.95) BS01 GTP N/A GO:0000287 ... N/A 23844012
    239681 4kgk:C (2.95) BS02 GTP N/A GO:0000287 ... N/A 23844012
    239682 4kgk:C (2.95) BS03 MG N/A GO:0000287 ... N/A 23844012
    239683 4kgk:C (2.95) BS04 MG N/A GO:0000287 ... N/A 23844012
    239684 4kgk:D (2.95) BS01 GTP N/A GO:0000287 ... N/A 23844012
    239685 4kgk:D (2.95) BS02 GTP N/A GO:0000287 ... N/A 23844012
    239686 4kgk:D (2.95) BS03 MG N/A GO:0000287 ... N/A 23844012
    239687 4kgk:D (2.95) BS04 MG N/A GO:0000287 ... N/A 23844012
    239688 4kgl:A (2.701) BS01 IDJ 3.2.1.76 GO:0004553 ... P35475 24036510
    239689 4kgl:B (2.701) BS01 MAN 3.2.1.76 GO:0004553 ... P35475 24036510
    239690 4kgl:B (2.701) BS02 MAN 3.2.1.76 GO:0004553 ... P35475 24036510
    239691 4kgl:B (2.701) BS03 IDJ 3.2.1.76 GO:0004553 ... P35475 24036510
    239692 4kgm:A (2.361) BS01 ATP N/A GO:0000287 ... N/A 23844012
    239693 4kgm:A (2.361) BS02 MG N/A GO:0000287 ... N/A 23844012
    239694 4kgm:A (2.361) BS03 MG N/A GO:0000287 ... N/A 23844012
    239695 4kgm:B (2.361) BS01 ATP N/A GO:0000287 ... N/A 23844012
    239696 4kgm:B (2.361) BS02 MG N/A GO:0000287 ... N/A 23844012
    239697 4kgm:B (2.361) BS03 MG N/A GO:0000287 ... N/A 23844012
    239698 4kgm:C (2.361) BS01 ATP N/A GO:0000287 ... N/A 23844012
    239699 4kgm:C (2.361) BS02 MG N/A GO:0000287 ... N/A 23844012
    239700 4kgm:C (2.361) BS03 MG N/A GO:0000287 ... N/A 23844012
    239701 4kgm:D (2.361) BS01 ATP N/A GO:0000287 ... N/A 23844012
    239702 4kgm:D (2.361) BS02 MG N/A GO:0000287 ... N/A 23844012
    239703 4kgm:D (2.361) BS03 MG N/A GO:0000287 ... N/A 23844012
    239704 4kgn:A (2.15) BS01 SAH 2.1.1.207 GO:0001510 ... Q3JWH1 N/A
    239705 4kgn:C (2.15) BS01 SAH 2.1.1.207 GO:0001510 ... Q3JWH1 N/A
    239706 4kgn:E (2.15) BS01 SAH 2.1.1.207 GO:0001510 ... Q3JWH1 N/A
    239707 4kgn:G (2.15) BS01 SAH 2.1.1.207 GO:0001510 ... Q3JWH1 N/A
    239708 4kgq:C (2.27) BS01 MG ? N/A O95407 25087510
    239709 4kgq:D (2.27) BS01 MAN ? N/A O95407 25087510
    239710 4kgq:D (2.27) BS02 MG ? N/A O95407 25087510
    239711 4kgv:A (2.1) BS01 PAL N/A GO:0004070 ... N/A 24138583
    239712 4kgv:B (2.1) BS01 ZN N/A GO:0006207 ... N/A 24138583
    239713 4kgv:B (2.1) BS02 ATP N/A GO:0006207 ... N/A 24138583
    239714 4kgv:C (2.1) BS01 PAL N/A GO:0004070 ... N/A 24138583
    239715 4kgv:D (2.1) BS01 ZN N/A GO:0006207 ... N/A 24138583
    239716 4kgv:D (2.1) BS02 ATP N/A GO:0006207 ... N/A 24138583
    239717 4kgx:A (2.202) BS01 PAL N/A GO:0004070 ... N/A 24138583
    239718 4kgx:B (2.202) BS01 ZN N/A GO:0006207 ... N/A 24138583
    239719 4kgx:B (2.202) BS02 CTP N/A GO:0006207 ... N/A 24138583
    239720 4kgx:C (2.202) BS01 PAL N/A GO:0004070 ... N/A 24138583
    239721 4kgx:D (2.202) BS01 ZN N/A GO:0006207 ... N/A 24138583
    239722 4kgx:D (2.202) BS02 CTP N/A GO:0006207 ... N/A 24138583
    239723 4kgz:A (2.4) BS01 PAL N/A GO:0004070 ... N/A 24138583
    239724 4kgz:B (2.4) BS01 ZN N/A GO:0006207 ... N/A 24138583
    239725 4kgz:B (2.4) BS02 UTP N/A GO:0006207 ... N/A 24138583
    239726 4kgz:B (2.4) BS03 UTP N/A GO:0006207 ... N/A 24138583
    239727 4kgz:C (2.4) BS01 PAL N/A GO:0004070 ... N/A 24138583
    239728 4kgz:D (2.4) BS01 ZN N/A GO:0006207 ... N/A 24138583
    239729 4kgz:D (2.4) BS02 UTP N/A GO:0006207 ... N/A 24138583
    239730 4kgz:D (2.4) BS03 UTP N/A GO:0006207 ... N/A 24138583
    239731 4kh0:A (2.25) BS01 PAL N/A GO:0004070 ... N/A 24138583
    239732 4kh0:B (2.25) BS01 ZN N/A GO:0006207 ... N/A 24138583
    239733 4kh0:B (2.25) BS02 ATP N/A GO:0006207 ... N/A 24138583
    239734 4kh0:B (2.25) BS03 ATP N/A GO:0006207 ... N/A 24138583
    239735 4kh0:B (2.25) BS04 ATP N/A GO:0006207 ... N/A 24138583
    239736 4kh0:B (2.25) BS05 ATP N/A GO:0006207 ... N/A 24138583
    239737 4kh0:C (2.25) BS01 PAL N/A GO:0004070 ... N/A 24138583
    239738 4kh0:D (2.25) BS01 ZN N/A GO:0006207 ... N/A 24138583
    239739 4kh0:D (2.25) BS02 ATP N/A GO:0006207 ... N/A 24138583
    239740 4kh0:D (2.25) BS03 ATP N/A GO:0006207 ... N/A 24138583
    239741 4kh1:A (2.2) BS01 PAL N/A GO:0004070 ... N/A 24138583
    239742 4kh1:B (2.2) BS01 ZN N/A GO:0006207 ... N/A 24138583
    239743 4kh1:B (2.2) BS02 CTP N/A GO:0006207 ... N/A 24138583
    239744 4kh1:B (2.2) BS03 UTP N/A GO:0006207 ... N/A 24138583
    239745 4kh1:C (2.2) BS01 PAL N/A GO:0004070 ... N/A 24138583
    239746 4kh1:D (2.2) BS01 ZN N/A GO:0006207 ... N/A 24138583
    239747 4kh1:D (2.2) BS02 CTP N/A GO:0006207 ... N/A 24138583
    239748 4kh1:D (2.2) BS03 UTP N/A GO:0006207 ... N/A 24138583
    239749 4kh2:A (2.36) BS01 FIF 3.2.1.76 GO:0004553 ... P35475 24036510
    239750 4kh2:B (2.36) BS01 MAN 3.2.1.76 GO:0004553 ... P35475 24036510
    239751 4kh2:B (2.36) BS02 FIF 3.2.1.76 GO:0004553 ... P35475 24036510
    239752 4kh4:A (3.0) BS01 ANP 3.6.1.15 GO:0005576 ... Q27895 24115522
    239753 4kh4:B (3.0) BS01 ANP 3.6.1.15 GO:0005576 ... Q27895 24115522
    239754 4kh5:A (3.0) BS01 AU1 3.6.1.15 GO:0005576 ... Q27895 24115522
    239755 4kh5:B (3.0) BS01 AU1 3.6.1.15 GO:0005576 ... Q27895 24115522
    239756 4kh6:A (2.4) BS01 AU1 3.6.1.15 GO:0005576 ... Q27895 24115522
    239757 4kh6:B (2.4) BS01 AU1 3.6.1.15 GO:0005576 ... Q27895 24115522
    239758 4kh7:A (1.5) BS01 GSH ? GO:0004364 ... Q8Z859 N/A
    239759 4kh7:B (1.5) BS01 GSH ? GO:0004364 ... Q8Z859 N/A
    239760 4khm:A (1.7) BS01 1PV 3.4.21.98
    3.6.1.15
    3.6.4.13
    GO:0003723 ... B1PPP0 23672667
    239761 4khm:B (1.7) BS01 1PV 3.4.21.98
    3.6.1.15
    3.6.4.13
    GO:0003723 ... B1PPP0 23672667
    239762 4khn:A (2.55) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 24116139
    239763 4khn:A (2.55) BS02 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 24116139
    239764 4khn:A (2.55) BS03 XG4 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 24116139
    239765 4khn:A (2.55) BS04 XG4 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 24116139
    239766 4khn:B (2.55) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 24116139
    239767 4khn:B (2.55) BS02 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 24116139
    239768 4khn:B (2.55) BS03 XG4 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 24116139
    239769 4khn:B (2.55) BS04 XG4 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 24116139
    239770 4kho:A (2.0) BS01 CA ? GO:0035101 ... G0SDN1 23698368
    239771 4kho:B (2.0) BS01 CA ? GO:0035101 ... G0SDN1 23698368
    239772 4khp:B (3.1) BS01 rna ? GO:0003735 ... P80371 23702293
    239773 4khp:C (3.1) BS01 rna ? GO:0003676 ... P80372 23702293
    239774 4khp:D (3.1) BS01 rna ? GO:0003723 ... P80373 23702293
    239775 4khp:D (3.1) BS02 MG ? GO:0003723 ... P80373 23702293
    239776 4khp:E (3.1) BS01 rna ? GO:0003723 ... Q5SHQ5 23702293
    239777 4khp:F (3.1) BS01 rna ? GO:0003735 ... Q5SLP8 23702293
    239778 4khp:G (3.1) BS01 rna ? GO:0000049 ... P17291 23702293
    239779 4khp:G (3.1) BS02 rna ? GO:0000049 ... P17291 23702293
    239780 4khp:H (3.1) BS01 rna N/A GO:0003735 ... P0DOY9 23702293
    239781 4khp:I (3.1) BS01 rna ? GO:0003723 ... P80374 23702293
    239782 4khp:J (3.1) BS01 rna ? GO:0000049 ... Q5SHN7 23702293
    239783 4khp:K (3.1) BS01 rna ? GO:0003735 ... P80376 23702293
    239784 4khp:K (3.1) BS02 MG ? GO:0003735 ... P80376 23702293
    239785 4khp:L (3.1) BS01 rna ? GO:0000049 ... Q5SHN3 23702293
    239786 4khp:L (3.1) BS02 MG ? GO:0000049 ... Q5SHN3 23702293
    239787 4khp:M (3.1) BS01 rna ? GO:0000049 ... P80377 23702293
    239788 4khp:N (3.1) BS01 rna N/A GO:0003735 ... P0DOY6 23702293
    239789 4khp:O (3.1) BS01 rna ? GO:0003735 ... Q5SJ76 23702293
    239790 4khp:P (3.1) BS01 rna ? GO:0003735 ... Q5SJH3 23702293
    239791 4khp:Q (3.1) BS01 rna N/A GO:0003735 ... P0DOY7 23702293
    239792 4khp:R (3.1) BS01 rna ? GO:0003735 ... Q5SLQ0 23702293
    239793 4khp:S (3.1) BS01 rna ? GO:0003723 ... Q5SHP2 23702293
    239794 4khp:S (3.1) BS02 MG ? GO:0003723 ... Q5SHP2 23702293
    239795 4khp:T (3.1) BS01 rna ? GO:0003723 ... P80380 23702293
    239796 4khq:A (2.186) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 24082122
    239797 4khq:A (2.186) BS02 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 24082122
    239798 4khq:A (2.186) BS03 CA 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 24082122
    239799 4khq:A (2.186) BS04 CA 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 24082122
    239800 4khq:A (2.186) BS05 CA 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 24082122

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).