SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    241601 4kze:L (2.404) BS01 rna N/A N/A N/A 24952597
    241602 4kzf:A (1.85) BS01 CL 3.5.1.4 GO:0004040 ... Q9L543 23946488
    241603 4kzi:A (2.41) BS01 ZJ0 ? GO:0003677 ... P22736 24316735
    241604 4kzk:A (1.5) BS01 GAL ? GO:0042882 ... Q2T607 N/A
    241605 4kzl:A (2.0) BS01 20D 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 24116873 BindingDB: IC50=1100nM
    241606 4kzl:A (2.0) BS02 ZN 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 24116873
    241607 4kzl:B (2.0) BS01 20D 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 24116873 BindingDB: IC50=1100nM
    241608 4kzl:B (2.0) BS02 ZN 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 24116873
    241609 4kzn:A (1.7114) BS01 FUC ? GO:0008083 ... P15692 N/A
    241610 4kzo:A (2.204) BS01 CA 1.1.1.42 GO:0000287 ... O75874 23731180
    241611 4kzo:A (2.204) BS02 NAP 1.1.1.42 GO:0000287 ... O75874 23731180 MOAD: Kd=0.043uM
    241612 4kzo:A (2.204) BS03 AKG 1.1.1.42 GO:0000287 ... O75874 23731180
    241613 4kzo:A (2.204) BS04 NAP 1.1.1.42 GO:0000287 ... O75874 23731180 MOAD: Kd=0.043uM
    241614 4kzo:B (2.204) BS01 NAP 1.1.1.42 GO:0000287 ... O75874 23731180 MOAD: Kd=0.043uM
    241615 4kzo:B (2.204) BS02 CA 1.1.1.42 GO:0000287 ... O75874 23731180
    241616 4kzo:B (2.204) BS03 NAP 1.1.1.42 GO:0000287 ... O75874 23731180 MOAD: Kd=0.043uM
    241617 4kzo:B (2.204) BS04 AKG 1.1.1.42 GO:0000287 ... O75874 23731180
    241618 4kzo:C (2.204) BS01 CA 1.1.1.42 GO:0000287 ... O75874 23731180
    241619 4kzo:C (2.204) BS02 NAP 1.1.1.42 GO:0000287 ... O75874 23731180 MOAD: Kd=0.043uM
    241620 4kzo:C (2.204) BS03 AKG 1.1.1.42 GO:0000287 ... O75874 23731180
    241621 4kzq:A (2.25) BS01 DFL 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 24116873
    241622 4kzq:A (2.25) BS02 ZN 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 24116873
    241623 4kzq:B (2.25) BS01 DFL 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 24116873
    241624 4kzq:B (2.25) BS02 ZN 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 24116873
    241625 4kzt:A (2.8) BS01 ARG 2.7.2.8 GO:0003991 ... Q0ASS9 23850694
    241626 4kzt:B (2.8) BS01 ARG 2.7.2.8 GO:0003991 ... Q0ASS9 23850694
    241627 4kzt:X (2.8) BS01 ARG 2.7.2.8 GO:0003991 ... Q0ASS9 23850694
    241628 4kzt:Y (2.8) BS01 ARG 2.7.2.8 GO:0003991 ... Q0ASS9 23850694
    241629 4kzu:A (2.1) BS01 A73 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 24116873
    241630 4kzu:A (2.1) BS02 ZN 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 24116873
    241631 4kzu:B (2.1) BS01 A73 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 24116873
    241632 4kzu:B (2.1) BS02 ZN 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 24116873
    241633 4kzv:A (1.4) BS01 GLC ? N/A E1BHM0 23960080
    241634 4kzv:A (1.4) BS02 GLC ? N/A E1BHM0 23960080
    241635 4kzv:A (1.4) BS03 CA ? N/A E1BHM0 23960080
    241636 4kzv:A (1.4) BS04 CA ? N/A E1BHM0 23960080
    241637 4kzv:B (1.4) BS01 CA ? N/A E1BHM0 23960080
    241638 4kzv:B (1.4) BS02 CA ? N/A E1BHM0 23960080
    241639 4kzw:A (1.85) BS01 CA ? N/A E1BHM0 23960080
    241640 4kzw:A (1.85) BS02 CA ? N/A E1BHM0 23960080
    241641 4kzw:B (1.85) BS01 CA ? N/A E1BHM0 23960080
    241642 4kzw:B (1.85) BS02 CA ? N/A E1BHM0 23960080
    241643 4kzx:A (7.809) BS01 rna ? GO:0000028 ... G1TGI6 23873042
    241644 4kzx:B (7.809) BS01 rna ? GO:0003735 ... G1TN72 23873042
    241645 4kzx:C (7.809) BS01 rna ? GO:0003723 ... G1U2Z9 23873042
    241646 4kzx:D (7.809) BS01 rna 4.2.99.18 GO:0003723 ... G1TNM3 23873042
    241647 4kzx:E (7.809) BS01 rna ? GO:0003723 ... G1TK17 23873042
    241648 4kzx:F (7.809) BS01 rna ? GO:0003723 ... G1TFM5 23873042
    241649 4kzx:G (7.809) BS01 rna ? GO:0003735 ... G1TM55 23873042
    241650 4kzx:H (7.809) BS01 rna ? GO:0003735 ... G1SVB0 23873042
    241651 4kzx:I (7.809) BS01 rna ? GO:0003735 ... G1TJW1 23873042
    241652 4kzx:J (7.809) BS01 rna ? GO:0003723 ... B7NZS8 23873042
    241653 4kzx:K (7.809) BS01 rna ? GO:0003723 ... G1T168 23873042
    241654 4kzx:L (7.809) BS01 rna ? GO:0003735 ... G1TRM4 23873042
    241655 4kzx:M (7.809) BS01 rna ? GO:0003735 ... G1SFR8 23873042
    241656 4kzx:N (7.809) BS01 rna ? GO:0003735 ... G1SP51 23873042
    241657 4kzx:O (7.809) BS01 rna ? GO:0003735 ... G1T1F0 23873042
    241658 4kzx:P (7.809) BS01 rna ? GO:0000028 ... G1U0Q2 23873042
    241659 4kzx:Q (7.809) BS01 rna ? GO:0000462 ... G1SGX4 23873042
    241660 4kzx:R (7.809) BS01 rna ? GO:0003735 ... G1TU13 23873042
    241661 4kzx:S (7.809) BS01 rna ? GO:0003676 ... G1TPG3 23873042
    241662 4kzx:T (7.809) BS01 rna ? GO:0000028 ... G1TN62 23873042
    241663 4kzx:U (7.809) BS01 rna ? GO:0003723 ... G1SIZ2 23873042
    241664 4kzx:W (7.809) BS01 rna ? GO:0003735 ... G1TG89 23873042
    241665 4kzx:X (7.809) BS01 rna ? GO:0003735 ... G1SZ47 23873042
    241666 4kzx:Y (7.809) BS01 rna ? GO:0003735 ... G1TS40 23873042
    241667 4kzx:Z (7.809) BS01 rna ? GO:0003735 ... G1TDB3 23873042
    241668 4kzx:a (7.809) BS01 rna ? GO:0003729 ... G1TFE8 23873042
    241669 4kzx:b (7.809) BS01 rna ? GO:0003735 ... G1TZ76 23873042
    241670 4kzx:c (7.809) BS01 rna ? GO:0000028 ... G1TIB4 23873042
    241671 4kzx:d (7.809) BS01 rna ? GO:0002181 ... G1U7M4 23873042
    241672 4kzx:e (7.809) BS01 rna ? GO:0003735 ... G1T8A2 23873042
    241673 4kzx:f (7.809) BS01 rna ? GO:0003735 ... G1SK22 23873042
    241674 4kzx:g (7.809) BS01 rna ? GO:0001891 ... G1SJB4 23873042
    241675 4kzx:l (7.809) BS01 rna ? GO:0003723 ... P41567 23873042
    241676 4kzy:A (7.01) BS01 rna ? GO:0000028 ... G1TGI6 23873042
    241677 4kzy:B (7.01) BS01 rna ? GO:0003735 ... G1TN72 23873042
    241678 4kzy:C (7.01) BS01 rna ? GO:0003723 ... G1U2Z9 23873042
    241679 4kzy:D (7.01) BS01 rna 4.2.99.18 GO:0003723 ... G1TNM3 23873042
    241680 4kzy:E (7.01) BS01 rna ? GO:0003723 ... G1TK17 23873042
    241681 4kzy:F (7.01) BS01 rna ? GO:0003723 ... G1TFM5 23873042
    241682 4kzy:G (7.01) BS01 rna ? GO:0003735 ... G1TM55 23873042
    241683 4kzy:H (7.01) BS01 rna ? GO:0003735 ... G1SVB0 23873042
    241684 4kzy:I (7.01) BS01 rna ? GO:0003735 ... G1TJW1 23873042
    241685 4kzy:J (7.01) BS01 rna ? GO:0003723 ... B7NZS8 23873042
    241686 4kzy:K (7.01) BS01 rna ? GO:0003723 ... G1T168 23873042
    241687 4kzy:L (7.01) BS01 rna ? GO:0003735 ... G1TRM4 23873042
    241688 4kzy:M (7.01) BS01 rna ? GO:0003735 ... G1SFR8 23873042
    241689 4kzy:N (7.01) BS01 rna ? GO:0003735 ... G1SP51 23873042
    241690 4kzy:O (7.01) BS01 rna ? GO:0003735 ... G1T1F0 23873042
    241691 4kzy:P (7.01) BS01 rna ? GO:0000028 ... G1U0Q2 23873042
    241692 4kzy:Q (7.01) BS01 rna ? GO:0000462 ... G1SGX4 23873042
    241693 4kzy:R (7.01) BS01 rna ? GO:0003735 ... G1TU13 23873042
    241694 4kzy:S (7.01) BS01 rna ? GO:0003676 ... G1TPG3 23873042
    241695 4kzy:T (7.01) BS01 rna ? GO:0000028 ... G1TN62 23873042
    241696 4kzy:U (7.01) BS01 rna ? GO:0003723 ... G1SIZ2 23873042
    241697 4kzy:W (7.01) BS01 rna ? GO:0003735 ... G1TG89 23873042
    241698 4kzy:X (7.01) BS01 rna ? GO:0003735 ... G1SZ47 23873042
    241699 4kzy:Y (7.01) BS01 rna ? GO:0003735 ... G1TS40 23873042
    241700 4kzy:Z (7.01) BS01 rna ? GO:0003735 ... G1TDB3 23873042
    241701 4kzy:a (7.01) BS01 rna ? GO:0003729 ... G1TFE8 23873042
    241702 4kzy:b (7.01) BS01 rna ? GO:0003735 ... G1TZ76 23873042
    241703 4kzy:c (7.01) BS01 rna ? GO:0000028 ... G1TIB4 23873042
    241704 4kzy:d (7.01) BS01 rna ? GO:0002181 ... G1U7M4 23873042
    241705 4kzy:e (7.01) BS01 rna ? GO:0003735 ... G1T8A2 23873042
    241706 4kzy:f (7.01) BS01 rna ? GO:0003735 ... G1SK22 23873042
    241707 4kzy:g (7.01) BS01 rna ? GO:0001891 ... G1SJB4 23873042
    241708 4kzy:l (7.01) BS01 rna ? GO:0003723 ... P41567 23873042
    241709 4kzy:n (7.01) BS01 rna ? GO:0003723 ... P47813 23873042
    241710 4kzz:A (7.0305) BS01 rna ? GO:0000028 ... G1TGI6 23873042
    241711 4kzz:B (7.0305) BS01 rna ? GO:0003735 ... G1TN72 23873042
    241712 4kzz:C (7.0305) BS01 rna ? GO:0003723 ... G1U2Z9 23873042
    241713 4kzz:D (7.0305) BS01 rna 4.2.99.18 GO:0003723 ... G1TNM3 23873042
    241714 4kzz:E (7.0305) BS01 rna ? GO:0003723 ... G1TK17 23873042
    241715 4kzz:F (7.0305) BS01 rna ? GO:0003723 ... G1TFM5 23873042
    241716 4kzz:G (7.0305) BS01 rna ? GO:0003735 ... G1TM55 23873042
    241717 4kzz:H (7.0305) BS01 rna ? GO:0003735 ... G1SVB0 23873042
    241718 4kzz:I (7.0305) BS01 rna ? GO:0003735 ... G1TJW1 23873042
    241719 4kzz:J (7.0305) BS01 rna ? GO:0003723 ... B7NZS8 23873042
    241720 4kzz:K (7.0305) BS01 rna ? GO:0003723 ... G1T168 23873042
    241721 4kzz:L (7.0305) BS01 rna ? GO:0003735 ... G1TRM4 23873042
    241722 4kzz:M (7.0305) BS01 rna ? GO:0003735 ... G1SFR8 23873042
    241723 4kzz:N (7.0305) BS01 rna ? GO:0003735 ... G1SP51 23873042
    241724 4kzz:O (7.0305) BS01 rna ? GO:0003735 ... G1T1F0 23873042
    241725 4kzz:P (7.0305) BS01 rna ? GO:0000028 ... G1U0Q2 23873042
    241726 4kzz:Q (7.0305) BS01 rna ? GO:0000462 ... G1SGX4 23873042
    241727 4kzz:Q (7.0305) BS02 rna ? GO:0000462 ... G1SGX4 23873042
    241728 4kzz:R (7.0305) BS01 rna ? GO:0003735 ... G1TU13 23873042
    241729 4kzz:S (7.0305) BS01 rna ? GO:0003676 ... G1TPG3 23873042
    241730 4kzz:T (7.0305) BS01 rna ? GO:0000028 ... G1TN62 23873042
    241731 4kzz:U (7.0305) BS01 rna ? GO:0003723 ... G1SIZ2 23873042
    241732 4kzz:W (7.0305) BS01 rna ? GO:0003735 ... G1TG89 23873042
    241733 4kzz:X (7.0305) BS01 rna ? GO:0003735 ... G1SZ47 23873042
    241734 4kzz:Y (7.0305) BS01 rna ? GO:0003735 ... G1TS40 23873042
    241735 4kzz:Z (7.0305) BS01 rna ? GO:0003735 ... G1TDB3 23873042
    241736 4kzz:a (7.0305) BS01 rna ? GO:0003729 ... G1TFE8 23873042
    241737 4kzz:a (7.0305) BS02 rna ? GO:0003729 ... G1TFE8 23873042
    241738 4kzz:b (7.0305) BS01 rna ? GO:0003735 ... G1TZ76 23873042
    241739 4kzz:c (7.0305) BS01 rna ? GO:0000028 ... G1TIB4 23873042
    241740 4kzz:d (7.0305) BS01 rna ? GO:0002181 ... G1U7M4 23873042
    241741 4kzz:e (7.0305) BS01 rna ? GO:0003735 ... G1T8A2 23873042
    241742 4kzz:f (7.0305) BS01 rna ? GO:0003735 ... G1SK22 23873042
    241743 4kzz:g (7.0305) BS01 rna ? GO:0001891 ... G1SJB4 23873042
    241744 4kzz:n (7.0305) BS01 rna ? GO:0003723 ... P47813 23873042
    241745 4kzz:n (7.0305) BS02 rna ? GO:0003723 ... P47813 23873042
    241746 4l02:A (2.75) BS01 1V2 2.3.1.-
    2.7.1.91
    GO:0000287 ... Q9NYA1 23845219 BindingDB: IC50=20nM
    241747 4l02:B (2.75) BS01 1V2 2.3.1.-
    2.7.1.91
    GO:0000287 ... Q9NYA1 23845219 BindingDB: IC50=20nM
    241748 4l02:C (2.75) BS01 1V2 2.3.1.-
    2.7.1.91
    GO:0000287 ... Q9NYA1 23845219 BindingDB: IC50=20nM
    241749 4l03:A (2.1) BS01 NAP 1.1.1.42 GO:0000287 ... O75874 23731180 MOAD: Kd=0.013uM
    241750 4l03:A (2.1) BS02 CA 1.1.1.42 GO:0000287 ... O75874 23731180
    241751 4l03:A (2.1) BS03 AKG 1.1.1.42 GO:0000287 ... O75874 23731180
    241752 4l03:A (2.1) BS04 NAP 1.1.1.42 GO:0000287 ... O75874 23731180 MOAD: Kd=0.013uM
    241753 4l03:B (2.1) BS01 NAP 1.1.1.42 GO:0000287 ... O75874 23731180 MOAD: Kd=0.013uM
    241754 4l03:B (2.1) BS02 NAP 1.1.1.42 GO:0000287 ... O75874 23731180 MOAD: Kd=0.013uM
    241755 4l03:B (2.1) BS03 CA 1.1.1.42 GO:0000287 ... O75874 23731180
    241756 4l03:B (2.1) BS04 AKG 1.1.1.42 GO:0000287 ... O75874 23731180
    241757 4l03:C (2.1) BS01 NAP 1.1.1.42 GO:0000287 ... O75874 23731180 MOAD: Kd=0.013uM
    241758 4l03:C (2.1) BS02 CA 1.1.1.42 GO:0000287 ... O75874 23731180
    241759 4l03:C (2.1) BS03 AKG 1.1.1.42 GO:0000287 ... O75874 23731180
    241760 4l04:A (2.87) BS01 AKG 1.1.1.42 GO:0000287 ... O75874 23731180
    241761 4l04:A (2.87) BS02 CA 1.1.1.42 GO:0000287 ... O75874 23731180
    241762 4l04:A (2.87) BS03 NAP 1.1.1.42 GO:0000287 ... O75874 23731180
    241763 4l04:A (2.87) BS04 NAP 1.1.1.42 GO:0000287 ... O75874 23731180
    241764 4l04:B (2.87) BS01 CA 1.1.1.42 GO:0000287 ... O75874 23731180
    241765 4l04:B (2.87) BS02 NAP 1.1.1.42 GO:0000287 ... O75874 23731180
    241766 4l04:B (2.87) BS03 AKG 1.1.1.42 GO:0000287 ... O75874 23731180
    241767 4l04:B (2.87) BS04 NAP 1.1.1.42 GO:0000287 ... O75874 23731180
    241768 4l04:C (2.87) BS01 AKG 1.1.1.42 GO:0000287 ... O75874 23731180
    241769 4l04:C (2.87) BS02 CA 1.1.1.42 GO:0000287 ... O75874 23731180
    241770 4l04:C (2.87) BS03 NAP 1.1.1.42 GO:0000287 ... O75874 23731180
    241771 4l04:C (2.87) BS04 NAP 1.1.1.42 GO:0000287 ... O75874 23731180
    241772 4l04:D (2.87) BS01 NAP 1.1.1.42 GO:0000287 ... O75874 23731180
    241773 4l04:D (2.87) BS02 AKG 1.1.1.42 GO:0000287 ... O75874 23731180
    241774 4l04:D (2.87) BS03 CA 1.1.1.42 GO:0000287 ... O75874 23731180
    241775 4l04:D (2.87) BS04 NAP 1.1.1.42 GO:0000287 ... O75874 23731180
    241776 4l04:E (2.87) BS01 AKG 1.1.1.42 GO:0000287 ... O75874 23731180
    241777 4l04:E (2.87) BS02 CA 1.1.1.42 GO:0000287 ... O75874 23731180
    241778 4l04:E (2.87) BS03 NAP 1.1.1.42 GO:0000287 ... O75874 23731180
    241779 4l04:E (2.87) BS04 AKG 1.1.1.42 GO:0000287 ... O75874 23731180
    241780 4l04:E (2.87) BS05 NAP 1.1.1.42 GO:0000287 ... O75874 23731180
    241781 4l04:F (2.87) BS01 NAP 1.1.1.42 GO:0000287 ... O75874 23731180
    241782 4l04:F (2.87) BS02 AKG 1.1.1.42 GO:0000287 ... O75874 23731180
    241783 4l04:F (2.87) BS03 CA 1.1.1.42 GO:0000287 ... O75874 23731180
    241784 4l04:F (2.87) BS04 NAP 1.1.1.42 GO:0000287 ... O75874 23731180
    241785 4l05:A (1.098) BS01 CU1 1.15.1.1 GO:0004784 ... P15453 26459556
    241786 4l05:A (1.098) BS02 CU 1.15.1.1 GO:0004784 ... P15453 26459556
    241787 4l05:A (1.098) BS03 ZN 1.15.1.1 GO:0004784 ... P15453 26459556
    241788 4l06:A (2.282) BS01 CA 1.1.1.42 GO:0000287 ... O75874 23731180
    241789 4l06:A (2.282) BS02 NAP 1.1.1.42 GO:0000287 ... O75874 23731180 MOAD: Kd=0.12uM
    241790 4l06:A (2.282) BS03 AKG 1.1.1.42 GO:0000287 ... O75874 23731180
    241791 4l06:B (2.282) BS01 NAP 1.1.1.42 GO:0000287 ... O75874 23731180 MOAD: Kd=0.12uM
    241792 4l06:B (2.282) BS02 CA 1.1.1.42 GO:0000287 ... O75874 23731180
    241793 4l06:B (2.282) BS03 NAP 1.1.1.42 GO:0000287 ... O75874 23731180 MOAD: Kd=0.12uM
    241794 4l06:B (2.282) BS04 AKG 1.1.1.42 GO:0000287 ... O75874 23731180
    241795 4l06:C (2.282) BS01 CA 1.1.1.42 GO:0000287 ... O75874 23731180
    241796 4l06:C (2.282) BS02 NAP 1.1.1.42 GO:0000287 ... O75874 23731180 MOAD: Kd=0.12uM
    241797 4l06:C (2.282) BS03 AKG 1.1.1.42 GO:0000287 ... O75874 23731180
    241798 4l06:D (2.282) BS01 NAP 1.1.1.42 GO:0000287 ... O75874 23731180 MOAD: Kd=0.12uM
    241799 4l06:D (2.282) BS02 CA 1.1.1.42 GO:0000287 ... O75874 23731180
    241800 4l06:D (2.282) BS03 NAP 1.1.1.42 GO:0000287 ... O75874 23731180 MOAD: Kd=0.12uM

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
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