SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    242801 4l6v:B (3.8) BS34 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242802 4l6v:B (3.8) BS35 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242803 4l6v:B (3.8) BS36 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242804 4l6v:B (3.8) BS37 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242805 4l6v:B (3.8) BS38 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242806 4l6v:B (3.8) BS39 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242807 4l6v:B (3.8) BS40 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242808 4l6v:B (3.8) BS41 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242809 4l6v:B (3.8) BS42 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242810 4l6v:B (3.8) BS43 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242811 4l6v:B (3.8) BS44 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242812 4l6v:B (3.8) BS45 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242813 4l6v:B (3.8) BS46 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242814 4l6v:B (3.8) BS47 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242815 4l6v:C (3.8) BS01 SF4 1.97.1.12 GO:0009055 ... P32422 24473073
    242816 4l6v:C (3.8) BS02 SF4 1.97.1.12 GO:0009055 ... P32422 24473073
    242817 4l6v:F (3.8) BS01 CLA 1.97.1.12 GO:0009522 ... P29256
    Q55329
    24473073
    242818 4l6v:I (3.8) BS01 CLA 1.97.1.12 GO:0009522 ... Q55330 24473073
    242819 4l6v:I (3.8) BS02 CLA 1.97.1.12 GO:0009522 ... Q55330 24473073
    242820 4l6v:I (3.8) BS03 CLA 1.97.1.12 GO:0009522 ... Q55330 24473073
    242821 4l6v:K (3.8) BS01 CLA 1.97.1.12 GO:0009522 ... P74564 24473073
    242822 4l6v:K (3.8) BS02 CLA 1.97.1.12 GO:0009522 ... P74564 24473073
    242823 4l6v:K (3.8) BS03 CLA 1.97.1.12 GO:0009522 ... P74564 24473073
    242824 4l6v:L (3.8) BS01 CLA 1.97.1.12 GO:0005886 ... P37277 24473073
    242825 4l6v:L (3.8) BS02 CLA 1.97.1.12 GO:0005886 ... P37277 24473073
    242826 4l6v:L (3.8) BS03 CLA 1.97.1.12 GO:0005886 ... P37277 24473073
    242827 4l6v:L (3.8) BS04 CLA 1.97.1.12 GO:0005886 ... P37277 24473073
    242828 4l6v:L (3.8) BS05 CLA 1.97.1.12 GO:0005886 ... P37277 24473073
    242829 4l6v:L (3.8) BS06 CLA 1.97.1.12 GO:0005886 ... P37277 24473073
    242830 4l6v:L (3.8) BS07 CLA 1.97.1.12 GO:0005886 ... P37277 24473073
    242831 4l6v:M (3.8) BS01 CLA 1.97.1.12 GO:0015979 ... P72986 24473073
    242832 4l6v:M (3.8) BS02 CLA 1.97.1.12 GO:0015979 ... P72986 24473073
    242833 4l6v:a (3.8) BS01 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242834 4l6v:a (3.8) BS02 PQN 1.97.1.12 GO:0000287 ... P29254 24473073
    242835 4l6v:a (3.8) BS03 SF4 1.97.1.12 GO:0000287 ... P29254 24473073
    242836 4l6v:a (3.8) BS04 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242837 4l6v:a (3.8) BS05 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242838 4l6v:a (3.8) BS06 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242839 4l6v:a (3.8) BS07 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242840 4l6v:a (3.8) BS08 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242841 4l6v:a (3.8) BS09 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242842 4l6v:a (3.8) BS10 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242843 4l6v:a (3.8) BS11 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242844 4l6v:a (3.8) BS12 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242845 4l6v:a (3.8) BS13 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242846 4l6v:a (3.8) BS14 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242847 4l6v:a (3.8) BS15 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242848 4l6v:a (3.8) BS16 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242849 4l6v:a (3.8) BS17 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242850 4l6v:a (3.8) BS18 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242851 4l6v:a (3.8) BS19 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242852 4l6v:a (3.8) BS20 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242853 4l6v:a (3.8) BS21 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242854 4l6v:a (3.8) BS22 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242855 4l6v:a (3.8) BS23 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242856 4l6v:a (3.8) BS24 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242857 4l6v:a (3.8) BS25 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242858 4l6v:a (3.8) BS26 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242859 4l6v:a (3.8) BS27 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242860 4l6v:a (3.8) BS28 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242861 4l6v:a (3.8) BS29 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242862 4l6v:a (3.8) BS30 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242863 4l6v:a (3.8) BS31 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242864 4l6v:a (3.8) BS32 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242865 4l6v:a (3.8) BS33 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242866 4l6v:a (3.8) BS34 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242867 4l6v:a (3.8) BS35 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242868 4l6v:a (3.8) BS36 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242869 4l6v:a (3.8) BS37 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242870 4l6v:a (3.8) BS38 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242871 4l6v:a (3.8) BS39 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242872 4l6v:a (3.8) BS40 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242873 4l6v:a (3.8) BS41 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242874 4l6v:a (3.8) BS42 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242875 4l6v:a (3.8) BS43 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242876 4l6v:a (3.8) BS44 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242877 4l6v:a (3.8) BS45 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242878 4l6v:a (3.8) BS46 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242879 4l6v:a (3.8) BS47 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242880 4l6v:a (3.8) BS48 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242881 4l6v:a (3.8) BS49 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242882 4l6v:a (3.8) BS50 CLA 1.97.1.12 GO:0000287 ... P29254 24473073
    242883 4l6v:b (3.8) BS01 SF4 1.97.1.12 GO:0000287 ... P29255 24473073
    242884 4l6v:b (3.8) BS02 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242885 4l6v:b (3.8) BS03 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242886 4l6v:b (3.8) BS04 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242887 4l6v:b (3.8) BS05 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242888 4l6v:b (3.8) BS06 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242889 4l6v:b (3.8) BS07 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242890 4l6v:b (3.8) BS08 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242891 4l6v:b (3.8) BS09 PQN 1.97.1.12 GO:0000287 ... P29255 24473073
    242892 4l6v:b (3.8) BS10 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242893 4l6v:b (3.8) BS11 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242894 4l6v:b (3.8) BS12 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242895 4l6v:b (3.8) BS13 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242896 4l6v:b (3.8) BS14 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242897 4l6v:b (3.8) BS15 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242898 4l6v:b (3.8) BS16 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242899 4l6v:b (3.8) BS17 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242900 4l6v:b (3.8) BS18 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242901 4l6v:b (3.8) BS19 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242902 4l6v:b (3.8) BS20 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242903 4l6v:b (3.8) BS21 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242904 4l6v:b (3.8) BS22 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242905 4l6v:b (3.8) BS23 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242906 4l6v:b (3.8) BS24 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242907 4l6v:b (3.8) BS25 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242908 4l6v:b (3.8) BS26 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242909 4l6v:b (3.8) BS27 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242910 4l6v:b (3.8) BS28 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242911 4l6v:b (3.8) BS29 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242912 4l6v:b (3.8) BS30 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242913 4l6v:b (3.8) BS31 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242914 4l6v:b (3.8) BS32 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242915 4l6v:b (3.8) BS33 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242916 4l6v:b (3.8) BS34 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242917 4l6v:b (3.8) BS35 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242918 4l6v:b (3.8) BS36 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242919 4l6v:b (3.8) BS37 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242920 4l6v:b (3.8) BS38 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242921 4l6v:b (3.8) BS39 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242922 4l6v:b (3.8) BS40 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242923 4l6v:b (3.8) BS41 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242924 4l6v:b (3.8) BS42 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242925 4l6v:b (3.8) BS43 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242926 4l6v:b (3.8) BS44 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242927 4l6v:b (3.8) BS45 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242928 4l6v:b (3.8) BS46 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242929 4l6v:b (3.8) BS47 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242930 4l6v:b (3.8) BS48 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242931 4l6v:b (3.8) BS49 CLA 1.97.1.12 GO:0000287 ... P29255 24473073
    242932 4l6v:c (3.8) BS01 SF4 1.97.1.12 GO:0009055 ... P32422 24473073
    242933 4l6v:c (3.8) BS02 SF4 1.97.1.12 GO:0009055 ... P32422 24473073
    242934 4l6v:f (3.8) BS01 CLA 1.97.1.12 GO:0009522 ... P29256
    Q55329
    24473073
    242935 4l6v:i (3.8) BS01 CLA 1.97.1.12 GO:0009522 ... Q55330 24473073
    242936 4l6v:i (3.8) BS02 CLA 1.97.1.12 GO:0009522 ... Q55330 24473073
    242937 4l6v:k (3.8) BS01 CLA 1.97.1.12 GO:0009522 ... P74564 24473073
    242938 4l6v:k (3.8) BS02 CLA 1.97.1.12 GO:0009522 ... P74564 24473073
    242939 4l6v:l (3.8) BS01 CLA 1.97.1.12 GO:0005886 ... P37277 24473073
    242940 4l6v:l (3.8) BS02 CLA 1.97.1.12 GO:0005886 ... P37277 24473073
    242941 4l6v:l (3.8) BS03 CLA 1.97.1.12 GO:0005886 ... P37277 24473073
    242942 4l6v:l (3.8) BS04 CLA 1.97.1.12 GO:0005886 ... P37277 24473073
    242943 4l6v:l (3.8) BS05 CLA 1.97.1.12 GO:0005886 ... P37277 24473073
    242944 4l6v:l (3.8) BS06 CLA 1.97.1.12 GO:0005886 ... P37277 24473073
    242945 4l6v:l (3.8) BS07 CLA 1.97.1.12 GO:0005886 ... P37277 24473073
    242946 4l6v:m (3.8) BS01 CLA 1.97.1.12 GO:0015979 ... P72986 24473073
    242947 4l6v:m (3.8) BS02 CLA 1.97.1.12 GO:0015979 ... P72986 24473073
    242948 4l6z:A (2.0) BS01 1DC 2.4.2.- GO:0003950 ... Q9Y6F1 24188023
    242949 4l70:A (2.0) BS01 1V9 2.4.2.- GO:0003950 ... Q9Y6F1 24188023
    242950 4l71:QB (3.9) BS01 rna ? GO:0003735 ... P80371 25128388
    242951 4l71:QC (3.9) BS01 rna ? GO:0003676 ... P80372 25128388
    242952 4l71:QD (3.9) BS01 rna ? GO:0003723 ... P80373 25128388
    242953 4l71:QD (3.9) BS02 ZN ? GO:0003723 ... P80373 25128388
    242954 4l71:QE (3.9) BS01 rna ? GO:0003723 ... Q5SHQ5 25128388
    242955 4l71:QF (3.9) BS01 rna ? GO:0003735 ... Q5SLP8 25128388
    242956 4l71:QF (3.9) BS02 MG ? GO:0003735 ... Q5SLP8 25128388
    242957 4l71:QG (3.9) BS01 rna ? GO:0000049 ... P17291 25128388
    242958 4l71:QH (3.9) BS01 rna ? GO:0003735 ... P0DOY9 25128388
    242959 4l71:QH (3.9) BS02 MG ? GO:0003735 ... P0DOY9 25128388
    242960 4l71:QI (3.9) BS01 rna ? GO:0003723 ... P80374 25128388
    242961 4l71:QI (3.9) BS02 rna ? GO:0003723 ... P80374 25128388
    242962 4l71:QJ (3.9) BS01 rna ? GO:0000049 ... Q5SHN7 25128388
    242963 4l71:QK (3.9) BS01 rna ? GO:0003735 ... P80376 25128388
    242964 4l71:QL (3.9) BS01 rna ? GO:0000049 ... Q5SHN3 25128388
    242965 4l71:QM (3.9) BS01 rna ? GO:0000049 ... P80377 25128388
    242966 4l71:QM (3.9) BS02 rna ? GO:0000049 ... P80377 25128388
    242967 4l71:QM (3.9) BS03 MG ? GO:0000049 ... P80377 25128388
    242968 4l71:QN (3.9) BS01 rna ? GO:0003735 ... P0DOY6 25128388
    242969 4l71:QN (3.9) BS02 ZN ? GO:0003735 ... P0DOY6 25128388
    242970 4l71:QO (3.9) BS01 rna ? GO:0003735 ... Q5SJ76 25128388
    242971 4l71:QP (3.9) BS01 rna ? GO:0003735 ... Q5SJH3 25128388
    242972 4l71:QQ (3.9) BS01 rna ? GO:0003735 ... P0DOY7 25128388
    242973 4l71:QR (3.9) BS01 rna ? GO:0003735 ... P62659 25128388
    242974 4l71:QS (3.9) BS01 rna ? GO:0000028 ... Q5SHP2 25128388
    242975 4l71:QT (3.9) BS01 rna ? GO:0003723 ... P80380 25128388
    242976 4l71:R0 (3.9) BS01 rna ? GO:0003735 ... P60493 25128388
    242977 4l71:R0 (3.9) BS02 rna ? GO:0003735 ... P60493 25128388
    242978 4l71:R1 (3.9) BS01 rna ? GO:0003735 ... P60494 25128388
    242979 4l71:R2 (3.9) BS01 rna ? GO:0003735 ... Q5SHP6 25128388
    242980 4l71:R3 (3.9) BS01 rna ? GO:0003735 ... Q5SHQ6 25128388
    242981 4l71:R4 (3.9) BS01 rna ? GO:0003735 ... Q5SJE1 25128388
    242982 4l71:R5 (3.9) BS01 rna ? GO:0003735 ... P80339 25128388
    242983 4l71:R6 (3.9) BS01 rna ? GO:0003735 ... P35871 25128388
    242984 4l71:R7 (3.9) BS01 rna ? GO:0003735 ... P80340 25128388
    242985 4l71:R8 (3.9) BS01 rna ? GO:0003735 ... Q5SKU1 25128388
    242986 4l71:R9 (3.9) BS01 rna ? GO:0003735 ... Q5SHR2 25128388
    242987 4l71:RD (3.9) BS01 rna ? GO:0002181 ... P60405 25128388
    242988 4l71:RD (3.9) BS02 MG ? GO:0002181 ... P60405 25128388
    242989 4l71:RD (3.9) BS03 MG ? GO:0002181 ... P60405 25128388
    242990 4l71:RE (3.9) BS01 rna ? GO:0003735 ... Q5SHN8 25128388
    242991 4l71:RF (3.9) BS01 rna ? GO:0003735 ... Q5SHN9 25128388
    242992 4l71:RF (3.9) BS02 MG ? GO:0003735 ... Q5SHN9 25128388
    242993 4l71:RG (3.9) BS01 rna ? GO:0000049 ... Q5SHQ0 25128388
    242994 4l71:RG (3.9) BS02 rna ? GO:0000049 ... Q5SHQ0 25128388
    242995 4l71:RH (3.9) BS01 rna ? GO:0002181 ... P0DOY8 25128388
    242996 4l71:RI (3.9) BS01 rna ? GO:0003735 ... Q5SLQ1 25128388
    242997 4l71:RN (3.9) BS01 rna ? GO:0003729 ... P60488 25128388
    242998 4l71:RO (3.9) BS01 rna ? GO:0003735 ... Q5SHP8 25128388
    242999 4l71:RO (3.9) BS02 rna ? GO:0003735 ... Q5SHP8 25128388
    243000 4l71:RP (3.9) BS01 rna ? GO:0003735 ... Q5SHQ7 25128388

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).