SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    243601 4le6:B (2.1) BS02 ZN 3.1.8.1 N/A Q5W503 24223749
    243602 4le6:C (2.1) BS01 ZN 3.1.8.1 N/A Q5W503 24223749
    243603 4le6:C (2.1) BS02 ZN 3.1.8.1 N/A Q5W503 24223749
    243604 4le6:D (2.1) BS01 ZN 3.1.8.1 N/A Q5W503 24223749
    243605 4le6:D (2.1) BS02 ZN 3.1.8.1 N/A Q5W503 24223749
    243606 4le6:E (2.1) BS01 ZN 3.1.8.1 N/A Q5W503 24223749
    243607 4le6:E (2.1) BS02 ZN 3.1.8.1 N/A Q5W503 24223749
    243608 4lea:A (2.55) BS01 BMA ? N/A T2LG16 24516380
    243609 4lea:A (2.55) BS02 BMA ? N/A T2LG16 24516380
    243610 4lea:A (2.55) BS03 BMA ? N/A T2LG16 24516380
    243611 4lea:A (2.55) BS04 BMA ? N/A T2LG16 24516380
    243612 4lea:A (2.55) BS05 BMA ? N/A T2LG16 24516380
    243613 4lea:B (2.55) BS01 BMA ? N/A T2LG16 24516380
    243614 4lea:B (2.55) BS02 BMA ? N/A T2LG16 24516380
    243615 4lea:B (2.55) BS03 BMA ? N/A T2LG16 24516380
    243616 4lea:B (2.55) BS04 BMA ? N/A T2LG16 24516380
    243617 4lea:B (2.55) BS05 BMA ? N/A T2LG16 24516380
    243618 4leb:A (1.4) BS01 peptide ? GO:0007155 ... Q59L12 24802757
    243619 4lec:A (2.28) BS01 SAH 2.1.1.- GO:0005515 ... Q8WXB1 N/A
    243620 4lec:B (2.28) BS01 SAH 2.1.1.- GO:0005515 ... Q8WXB1 N/A
    243621 4led:A (2.37) BS01 XXR ? N/A T2LG16 24516380
    243622 4led:A (2.37) BS02 XXR ? N/A T2LG16 24516380
    243623 4led:A (2.37) BS03 XXR ? N/A T2LG16 24516380
    243624 4led:B (2.37) BS01 XXR ? N/A T2LG16 24516380
    243625 4led:B (2.37) BS02 XXR ? N/A T2LG16 24516380
    243626 4led:B (2.37) BS03 XXR ? N/A T2LG16 24516380
    243627 4led:B (2.37) BS04 XXR ? N/A T2LG16 24516380
    243628 4lef:A (1.842) BS01 ZN 3.1.-.- GO:0008270 ... P45548 N/A
    243629 4lef:A (1.842) BS02 ZN 3.1.-.- GO:0008270 ... P45548 N/A
    243630 4lef:B (1.842) BS01 ZN 3.1.-.- GO:0008270 ... P45548 N/A
    243631 4lef:B (1.842) BS02 ZN 3.1.-.- GO:0008270 ... P45548 N/A
    243632 4lef:B (1.842) BS03 BGC 3.1.-.- GO:0008270 ... P45548 N/A
    243633 4lef:C (1.842) BS01 ZN 3.1.-.- GO:0008270 ... P45548 N/A
    243634 4lef:C (1.842) BS02 ZN 3.1.-.- GO:0008270 ... P45548 N/A
    243635 4lef:C (1.842) BS03 BGC 3.1.-.- GO:0008270 ... P45548 N/A
    243636 4lef:D (1.842) BS01 ZN 3.1.-.- GO:0008270 ... P45548 N/A
    243637 4lef:D (1.842) BS02 ZN 3.1.-.- GO:0008270 ... P45548 N/A
    243638 4lef:E (1.842) BS01 ZN 3.1.-.- GO:0008270 ... P45548 N/A
    243639 4lef:E (1.842) BS02 ZN 3.1.-.- GO:0008270 ... P45548 N/A
    243640 4lef:F (1.842) BS01 ZN 3.1.-.- GO:0008270 ... P45548 N/A
    243641 4lef:F (1.842) BS02 ZN 3.1.-.- GO:0008270 ... P45548 N/A
    243642 4lef:G (1.842) BS01 ZN 3.1.-.- GO:0008270 ... P45548 N/A
    243643 4lef:G (1.842) BS02 ZN 3.1.-.- GO:0008270 ... P45548 N/A
    243644 4lef:H (1.842) BS01 ZN 3.1.-.- GO:0008270 ... P45548 N/A
    243645 4lef:H (1.842) BS02 ZN 3.1.-.- GO:0008270 ... P45548 N/A
    243646 4lei:A (3.15) BS01 TYD ? GO:0008194 ... Q9ALN7 24945604
    243647 4lei:B (3.15) BS01 TYD ? GO:0008194 ... Q9ALN7 24945604
    243648 4lej:A (2.402) BS01 CU ? GO:0005507 ... V9VGU0 24328105
    243649 4lek:X (1.7) BS01 NAP 1.5.1.3 GO:0004146 ... P0A017 24428639
    243650 4lek:X (1.7) BS02 1DN 1.5.1.3 GO:0004146 ... P0A017 24428639 MOAD: Ki=0.16nM
    BindingDB: Ki=0.160000nM
    243651 4lel:QB (3.9) BS01 rna ? GO:0003735 ... P80371 25128388
    243652 4lel:QC (3.9) BS01 rna ? GO:0003676 ... P80372 25128388
    243653 4lel:QD (3.9) BS01 rna ? GO:0003723 ... P80373 25128388
    243654 4lel:QD (3.9) BS02 ZN ? GO:0003723 ... P80373 25128388
    243655 4lel:QE (3.9) BS01 rna ? GO:0003723 ... Q5SHQ5 25128388
    243656 4lel:QF (3.9) BS01 rna ? GO:0003735 ... Q5SLP8 25128388
    243657 4lel:QG (3.9) BS01 rna ? GO:0000049 ... P17291 25128388
    243658 4lel:QH (3.9) BS01 rna N/A GO:0003735 ... P0DOY9 25128388
    243659 4lel:QI (3.9) BS01 rna ? GO:0003723 ... P80374 25128388
    243660 4lel:QI (3.9) BS02 rna ? GO:0003723 ... P80374 25128388
    243661 4lel:QJ (3.9) BS01 rna ? GO:0000049 ... Q5SHN7 25128388
    243662 4lel:QJ (3.9) BS02 rna ? GO:0000049 ... Q5SHN7 25128388
    243663 4lel:QK (3.9) BS01 rna ? GO:0003735 ... P80376 25128388
    243664 4lel:QL (3.9) BS01 rna ? GO:0000049 ... Q5SHN3 25128388
    243665 4lel:QM (3.9) BS01 rna ? GO:0000049 ... P80377 25128388
    243666 4lel:QM (3.9) BS02 rna ? GO:0000049 ... P80377 25128388
    243667 4lel:QM (3.9) BS03 MG ? GO:0000049 ... P80377 25128388
    243668 4lel:QN (3.9) BS01 rna N/A GO:0003735 ... P0DOY6 25128388
    243669 4lel:QN (3.9) BS02 ZN N/A GO:0003735 ... P0DOY6 25128388
    243670 4lel:QO (3.9) BS01 rna ? GO:0003735 ... Q5SJ76 25128388
    243671 4lel:QO (3.9) BS02 rna ? GO:0003735 ... Q5SJ76 25128388
    243672 4lel:QP (3.9) BS01 rna ? GO:0003735 ... Q5SJH3 25128388
    243673 4lel:QQ (3.9) BS01 rna N/A GO:0003735 ... P0DOY7 25128388
    243674 4lel:QR (3.9) BS01 rna ? GO:0003735 ... Q5SLQ0 25128388
    243675 4lel:QS (3.9) BS01 rna ? GO:0000028 ... Q5SHP2 25128388
    243676 4lel:QT (3.9) BS01 rna ? GO:0003723 ... P80380 25128388
    243677 4lel:R0 (3.9) BS01 rna ? GO:0003735 ... P60493 25128388
    243678 4lel:R0 (3.9) BS02 rna ? GO:0003735 ... P60493 25128388
    243679 4lel:R0 (3.9) BS03 rna ? GO:0003735 ... P60493 25128388
    243680 4lel:R1 (3.9) BS01 rna ? GO:0003735 ... P60494 25128388
    243681 4lel:R2 (3.9) BS01 rna ? GO:0003735 ... Q5SHP6 25128388
    243682 4lel:R3 (3.9) BS01 rna ? GO:0003735 ... Q5SHQ6 25128388
    243683 4lel:R4 (3.9) BS01 rna ? GO:0003735 ... Q5SJE1 25128388
    243684 4lel:R4 (3.9) BS02 rna ? GO:0003735 ... Q5SJE1 25128388
    243685 4lel:R5 (3.9) BS01 rna ? GO:0003735 ... P80339 25128388
    243686 4lel:R6 (3.9) BS01 rna ? GO:0003735 ... P35871 25128388
    243687 4lel:R7 (3.9) BS01 rna ? GO:0003735 ... P80340 25128388
    243688 4lel:R8 (3.9) BS01 rna ? GO:0003735 ... Q5SKU1 25128388
    243689 4lel:R9 (3.9) BS01 rna ? GO:0003735 ... Q5SHR2 25128388
    243690 4lel:RD (3.9) BS01 rna ? GO:0002181 ... P60405 25128388
    243691 4lel:RD (3.9) BS02 MG ? GO:0002181 ... P60405 25128388
    243692 4lel:RE (3.9) BS01 rna ? GO:0003735 ... Q5SHN8 25128388
    243693 4lel:RF (3.9) BS01 rna ? GO:0003735 ... Q5SHN9 25128388
    243694 4lel:RF (3.9) BS02 MG ? GO:0003735 ... Q5SHN9 25128388
    243695 4lel:RG (3.9) BS01 rna ? GO:0000049 ... Q5SHQ0 25128388
    243696 4lel:RG (3.9) BS02 rna ? GO:0000049 ... Q5SHQ0 25128388
    243697 4lel:RH (3.9) BS01 rna N/A GO:0002181 ... P0DOY8 25128388
    243698 4lel:RI (3.9) BS01 rna ? GO:0003735 ... Q5SLQ1 25128388
    243699 4lel:RN (3.9) BS01 rna ? GO:0003729 ... P60488 25128388
    243700 4lel:RO (3.9) BS01 rna ? GO:0003735 ... Q5SHP8 25128388
    243701 4lel:RO (3.9) BS02 rna ? GO:0003735 ... Q5SHP8 25128388
    243702 4lel:RP (3.9) BS01 rna ? GO:0003735 ... Q5SHQ7 25128388
    243703 4lel:RP (3.9) BS02 MG ? GO:0003735 ... Q5SHQ7 25128388
    243704 4lel:RQ (3.9) BS01 rna ? GO:0003735 ... P60489 25128388
    243705 4lel:RQ (3.9) BS02 rna ? GO:0003735 ... P60489 25128388
    243706 4lel:RR (3.9) BS01 rna ? GO:0003735 ... Q9Z9H5 25128388
    243707 4lel:RS (3.9) BS01 rna ? GO:0003735 ... Q5SHQ4 25128388
    243708 4lel:RS (3.9) BS02 rna ? GO:0003735 ... Q5SHQ4 25128388
    243709 4lel:RT (3.9) BS01 rna ? GO:0003735 ... P60490 25128388
    243710 4lel:RT (3.9) BS02 rna ? GO:0003735 ... P60490 25128388
    243711 4lel:RU (3.9) BS01 rna ? GO:0000027 ... P60491 25128388
    243712 4lel:RV (3.9) BS01 rna ? GO:0003723 ... P60492 25128388
    243713 4lel:RW (3.9) BS01 rna ? GO:0003735 ... Q5SHP3 25128388
    243714 4lel:RX (3.9) BS01 rna ? GO:0003735 ... Q5SHP0 25128388
    243715 4lel:RY (3.9) BS01 rna ? GO:0003723 ... Q5SHP9 25128388
    243716 4lel:RZ (3.9) BS01 rna ? GO:0003723 ... Q5SHZ1 25128388
    243717 4lel:RZ (3.9) BS02 rna ? GO:0003723 ... Q5SHZ1 25128388
    243718 4lel:XB (3.9) BS01 rna ? GO:0003735 ... P80371 25128388
    243719 4lel:XC (3.9) BS01 rna ? GO:0003676 ... P80372 25128388
    243720 4lel:XD (3.9) BS01 rna ? GO:0003723 ... P80373 25128388
    243721 4lel:XD (3.9) BS02 ZN ? GO:0003723 ... P80373 25128388
    243722 4lel:XE (3.9) BS01 rna ? GO:0003723 ... Q5SHQ5 25128388
    243723 4lel:XF (3.9) BS01 rna ? GO:0003735 ... Q5SLP8 25128388
    243724 4lel:XG (3.9) BS01 rna ? GO:0000049 ... P17291 25128388
    243725 4lel:XH (3.9) BS01 rna N/A GO:0003735 ... P0DOY9 25128388
    243726 4lel:XI (3.9) BS01 rna ? GO:0003723 ... P80374 25128388
    243727 4lel:XI (3.9) BS02 rna ? GO:0003723 ... P80374 25128388
    243728 4lel:XJ (3.9) BS01 rna ? GO:0000049 ... Q5SHN7 25128388
    243729 4lel:XK (3.9) BS01 rna ? GO:0003735 ... P80376 25128388
    243730 4lel:XL (3.9) BS01 rna ? GO:0000049 ... Q5SHN3 25128388
    243731 4lel:XM (3.9) BS01 rna ? GO:0000049 ... P80377 25128388
    243732 4lel:XM (3.9) BS02 rna ? GO:0000049 ... P80377 25128388
    243733 4lel:XM (3.9) BS03 MG ? GO:0000049 ... P80377 25128388
    243734 4lel:XN (3.9) BS01 rna N/A GO:0003735 ... P0DOY6 25128388
    243735 4lel:XN (3.9) BS02 ZN N/A GO:0003735 ... P0DOY6 25128388
    243736 4lel:XO (3.9) BS01 rna ? GO:0003735 ... Q5SJ76 25128388
    243737 4lel:XO (3.9) BS02 rna ? GO:0003735 ... Q5SJ76 25128388
    243738 4lel:XP (3.9) BS01 rna ? GO:0003735 ... Q5SJH3 25128388
    243739 4lel:XQ (3.9) BS01 rna N/A GO:0003735 ... P0DOY7 25128388
    243740 4lel:XR (3.9) BS01 rna ? GO:0003735 ... Q5SLQ0 25128388
    243741 4lel:XS (3.9) BS01 rna ? GO:0000028 ... Q5SHP2 25128388
    243742 4lel:XT (3.9) BS01 rna ? GO:0003723 ... P80380 25128388
    243743 4lel:Y0 (3.9) BS01 rna ? GO:0003735 ... P60493 25128388
    243744 4lel:Y0 (3.9) BS02 rna ? GO:0003735 ... P60493 25128388
    243745 4lel:Y0 (3.9) BS03 rna ? GO:0003735 ... P60493 25128388
    243746 4lel:Y1 (3.9) BS01 rna ? GO:0003735 ... P60494 25128388
    243747 4lel:Y2 (3.9) BS01 rna ? GO:0003735 ... Q5SHP6 25128388
    243748 4lel:Y3 (3.9) BS01 rna ? GO:0003735 ... Q5SHQ6 25128388
    243749 4lel:Y3 (3.9) BS02 rna ? GO:0003735 ... Q5SHQ6 25128388
    243750 4lel:Y4 (3.9) BS01 rna ? GO:0003735 ... Q5SJE1 25128388
    243751 4lel:Y4 (3.9) BS02 rna ? GO:0003735 ... Q5SJE1 25128388
    243752 4lel:Y5 (3.9) BS01 rna ? GO:0003735 ... P80339 25128388
    243753 4lel:Y6 (3.9) BS01 rna ? GO:0003735 ... P35871 25128388
    243754 4lel:Y7 (3.9) BS01 rna ? GO:0003735 ... P80340 25128388
    243755 4lel:Y8 (3.9) BS01 rna ? GO:0003735 ... Q5SKU1 25128388
    243756 4lel:Y9 (3.9) BS01 rna ? GO:0003735 ... Q5SHR2 25128388
    243757 4lel:YD (3.9) BS01 rna ? GO:0002181 ... P60405 25128388
    243758 4lel:YE (3.9) BS01 rna ? GO:0003735 ... Q5SHN8 25128388
    243759 4lel:YF (3.9) BS01 rna ? GO:0003735 ... Q5SHN9 25128388
    243760 4lel:YG (3.9) BS01 rna ? GO:0000049 ... Q5SHQ0 25128388
    243761 4lel:YG (3.9) BS02 rna ? GO:0000049 ... Q5SHQ0 25128388
    243762 4lel:YH (3.9) BS01 rna N/A GO:0002181 ... P0DOY8 25128388
    243763 4lel:YI (3.9) BS01 rna ? GO:0003735 ... Q5SLQ1 25128388
    243764 4lel:YI (3.9) BS02 rna ? GO:0003735 ... Q5SLQ1 25128388
    243765 4lel:YN (3.9) BS01 rna ? GO:0003729 ... P60488 25128388
    243766 4lel:YO (3.9) BS01 rna ? GO:0003735 ... Q5SHP8 25128388
    243767 4lel:YO (3.9) BS02 rna ? GO:0003735 ... Q5SHP8 25128388
    243768 4lel:YP (3.9) BS01 rna ? GO:0003735 ... Q5SHQ7 25128388
    243769 4lel:YQ (3.9) BS01 rna ? GO:0003735 ... P60489 25128388
    243770 4lel:YQ (3.9) BS02 rna ? GO:0003735 ... P60489 25128388
    243771 4lel:YR (3.9) BS01 rna ? GO:0003735 ... Q9Z9H5 25128388
    243772 4lel:YS (3.9) BS01 rna ? GO:0003735 ... Q5SHQ4 25128388
    243773 4lel:YS (3.9) BS02 rna ? GO:0003735 ... Q5SHQ4 25128388
    243774 4lel:YT (3.9) BS01 rna ? GO:0003735 ... P60490 25128388
    243775 4lel:YT (3.9) BS02 rna ? GO:0003735 ... P60490 25128388
    243776 4lel:YU (3.9) BS01 rna ? GO:0000027 ... P60491 25128388
    243777 4lel:YV (3.9) BS01 rna ? GO:0003723 ... P60492 25128388
    243778 4lel:YW (3.9) BS01 rna ? GO:0003735 ... Q5SHP3 25128388
    243779 4lel:YX (3.9) BS01 rna ? GO:0003735 ... Q5SHP0 25128388
    243780 4lel:YY (3.9) BS01 rna ? GO:0003723 ... Q5SHP9 25128388
    243781 4lel:YZ (3.9) BS01 rna ? GO:0003723 ... Q5SHZ1 25128388
    243782 4lel:YZ (3.9) BS02 rna ? GO:0003723 ... Q5SHZ1 25128388
    243783 4lem:A (2.27) BS01 B12 1.2.1.88 GO:0003842 ... O50443 25557497
    243784 4lem:B (2.27) BS01 B12 1.2.1.88 GO:0003842 ... O50443 25557497
    243785 4lem:C (2.27) BS01 B12 1.2.1.88 GO:0003842 ... O50443 25557497
    243786 4lem:C (2.27) BS02 MG 1.2.1.88 GO:0003842 ... O50443 25557497
    243787 4lem:D (2.27) BS01 B12 1.2.1.88 GO:0003842 ... O50443 25557497
    243788 4lem:D (2.27) BS02 MG 1.2.1.88 GO:0003842 ... O50443 25557497
    243789 4lem:F (2.27) BS01 MG 1.2.1.88 GO:0003842 ... O50443 25557497
    243790 4len:A (1.5) BS01 2GK 3.5.2.6 GO:0008800 ... Q9L5C8 24882105
    243791 4len:B (1.5) BS01 2GK 3.5.2.6 GO:0008800 ... Q9L5C8 24882105
    243792 4lep:A (3.2) BS01 AFS ? GO:0005886 ... Q8EHE6 23867627
    243793 4lep:B (3.2) BS01 AFS ? GO:0005886 ... Q8EHE6 23867627
    243794 4leq:A (1.405) BS01 1WK 2.4.2.29 GO:0002099 ... P28720 25483606 MOAD: Kd=288nM
    243795 4leq:A (1.405) BS02 ZN 2.4.2.29 GO:0002099 ... P28720 25483606
    243796 4lev:A (1.952) BS01 ZN 2.7.7.86 N/A Q8N884 24332030
    243797 4lev:B (1.952) BS01 ZN 2.7.7.86 N/A Q8N884 24332030
    243798 4lew:A (2.04) BS01 ZN 2.7.7.86 N/A Q8N884 24332030
    243799 4lew:B (2.04) BS01 ZN 2.7.7.86 N/A Q8N884 24332030
    243800 4ley:A (2.5) BS01 dna 2.7.7.86 N/A Q8C6L5 24332030

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).