SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    244601 4lk7:D (1.758) BS02 GAL ? GO:0005737 ... Q05097 23869965
    244602 4lk8:B (1.494) BS01 CO ? GO:0005506 ... A1SR01 25832196
    244603 4lk9:A (1.6) BS01 peptide 2.3.1.48 N/A Q92794 24150941
    244604 4lk9:A (1.6) BS02 ZN 2.3.1.48 N/A Q92794 24150941
    244605 4lk9:A (1.6) BS03 ZN 2.3.1.48 N/A Q92794 24150941
    244606 4lk9:A (1.6) BS04 ZN 2.3.1.48 N/A Q92794 24150941
    244607 4lk9:A (1.6) BS05 ZN 2.3.1.48 N/A Q92794 24150941
    244608 4lka:A (1.61) BS01 peptide 2.3.1.48 N/A Q92794 24150941
    244609 4lka:A (1.61) BS02 ZN 2.3.1.48 N/A Q92794 24150941
    244610 4lka:A (1.61) BS03 ZN 2.3.1.48 N/A Q92794 24150941
    244611 4lka:A (1.61) BS04 ZN 2.3.1.48 N/A Q92794 24150941
    244612 4lka:A (1.61) BS05 ZN 2.3.1.48 N/A Q92794 24150941
    244613 4lkd:A (2.307) BS01 GAL ? GO:0005737 ... Q05097 24307364
    244614 4lkd:A (2.307) BS02 CA ? GO:0005737 ... Q05097 24307364
    244615 4lkd:B (2.307) BS01 GAL ? GO:0005737 ... Q05097 24307364
    244616 4lkd:B (2.307) BS02 CA ? GO:0005737 ... Q05097 24307364
    244617 4lkd:C (2.307) BS01 GAL ? GO:0005737 ... Q05097 24307364
    244618 4lkd:C (2.307) BS02 CA ? GO:0005737 ... Q05097 24307364
    244619 4lkd:D (2.307) BS01 GAL ? GO:0005737 ... Q05097 24307364
    244620 4lkd:D (2.307) BS02 CA ? GO:0005737 ... Q05097 24307364
    244621 4lkd:E (2.307) BS01 GAL ? GO:0005737 ... Q05097 24307364
    244622 4lkd:E (2.307) BS02 CA ? GO:0005737 ... Q05097 24307364
    244623 4lkd:F (2.307) BS01 GAL ? GO:0005737 ... Q05097 24307364
    244624 4lkd:F (2.307) BS02 CA ? GO:0005737 ... Q05097 24307364
    244625 4lkd:G (2.307) BS01 GAL ? GO:0005737 ... Q05097 24307364
    244626 4lkd:G (2.307) BS02 CA ? GO:0005737 ... Q05097 24307364
    244627 4lkd:H (2.307) BS01 GAL ? GO:0005737 ... Q05097 24307364
    244628 4lkd:H (2.307) BS02 CA ? GO:0005737 ... Q05097 24307364
    244629 4lke:A (1.653) BS01 GAL ? GO:0005737 ... Q05097 24307364
    244630 4lke:A (1.653) BS02 CA ? GO:0005737 ... Q05097 24307364
    244631 4lke:B (1.653) BS01 GAL ? GO:0005737 ... Q05097 24307364
    244632 4lke:B (1.653) BS02 CA ? GO:0005737 ... Q05097 24307364
    244633 4lke:C (1.653) BS01 GAL ? GO:0005737 ... Q05097 24307364
    244634 4lke:C (1.653) BS02 CA ? GO:0005737 ... Q05097 24307364
    244635 4lke:D (1.653) BS01 peptide ? GO:0005737 ... Q05097 24307364
    244636 4lke:D (1.653) BS02 GAL ? GO:0005737 ... Q05097 24307364
    244637 4lke:D (1.653) BS03 CA ? GO:0005737 ... Q05097 24307364
    244638 4lkf:A (1.64) BS01 GAL ? GO:0005737 ... Q05097 24307364
    244639 4lkf:A (1.64) BS02 CA ? GO:0005737 ... Q05097 24307364
    244640 4lkf:B (1.64) BS01 GAL ? GO:0005737 ... Q05097 24307364
    244641 4lkf:B (1.64) BS02 CA ? GO:0005737 ... Q05097 24307364
    244642 4lkg:A (2.994) BS01 GAL ? GO:0019031 ... V5IRV0 24009358
    244643 4lkg:A (2.994) BS02 SIA ? GO:0019031 ... V5IRV0 24009358
    244644 4lkg:C (2.994) BS01 SIA ? GO:0019031 ... V5IRV0 24009358
    244645 4lkg:E (2.994) BS01 SIA ? GO:0019031 ... V5IRV0 24009358
    244646 4lkh:A (3.099) BS01 SIA ? GO:0019031 ... V5IRV0 24009358
    244647 4lkj:A (2.798) BS01 SIA ? GO:0019031 ... V5IRV5 24009358
    244648 4lkk:A (2.491) BS01 GAL ? GO:0019031 ... V5IRV5 24009358
    244649 4lkk:A (2.491) BS02 SIA ? GO:0019031 ... V5IRV5 24009358
    244650 4lkl:A (1.58) BS01 peptide 2.7.11.21 N/A P53350 24223211
    244651 4lkl:A (1.58) BS02 ADM 2.7.11.21 N/A P53350 24223211
    244652 4lkm:A (2.0) BS01 peptide 2.7.11.21 N/A P53350 24223211
    244653 4lkm:C (2.0) BS01 peptide 2.7.11.21 N/A P53350 24223211
    244654 4lko:A (2.43) BS01 1WH 3.4.14.5 GO:0001618 ... P27487 23964740 MOAD: Ki=8.3nM
    244655 4lko:B (2.43) BS01 1WH 3.4.14.5 GO:0001618 ... P27487 23964740 MOAD: Ki=8.3nM
    244656 4lkq:A (1.62) BS01 1XM 3.1.4.17 GO:0004114 ... Q9Y233 24375910 MOAD: Ki=450uM
    244657 4lks:A (1.5) BS01 CA ? N/A A0A0H2YST8 28158290
    244658 4lks:A (1.5) BS02 GAL ? N/A A0A0H2YST8 28158290
    244659 4lks:C (1.5) BS01 CA ? N/A A0A0H2YST8 28158290
    244660 4lks:C (1.5) BS02 GAL ? N/A A0A0H2YST8 28158290
    244661 4lkt:A (2.57) BS01 EIC ? GO:0001972 ... Q01469 24692551 BindingDB: Ki=1.26e+3nM
    244662 4lkt:B (2.57) BS01 EIC ? GO:0001972 ... Q01469 24692551 BindingDB: Ki=1.26e+3nM
    244663 4lkt:C (2.57) BS01 EIC ? GO:0001972 ... Q01469 24692551 BindingDB: Ki=1.26e+3nM
    244664 4lkt:D (2.57) BS01 EIC ? GO:0001972 ... Q01469 24692551 BindingDB: Ki=1.26e+3nM
    244665 4lkv:A (3.5109) BS01 LP4 2.7.1.130 GO:0005524 ... O67572 25023290
    244666 4lkv:A (3.5109) BS02 LP5 2.7.1.130 GO:0005524 ... O67572 25023290
    244667 4lkv:C (3.5109) BS01 LP5 2.7.1.130 GO:0005524 ... O67572 25023290
    244668 4lkx:A (1.92) BS01 peptide ? N/A Q6GMX6 24457896
    244669 4lkx:B (1.92) BS01 peptide ? GO:0005576 ... Q0KKI6 24457896
    244670 4ll0:A (4.0) BS01 YUN 2.7.10.1 GO:0004672 ... P00533 24019492 BindingDB: IC50=2.62nM
    244671 4ll0:B (4.0) BS01 YUN 2.7.10.1 GO:0004672 ... P00533 24019492 BindingDB: IC50=2.62nM
    244672 4ll2:B (2.6) BS01 CA ? N/A G1K3R9 N/A
    244673 4ll3:A (1.95) BS01 017 ? GO:0004190 ... P03367 24785545 MOAD: Kd=2.7pM
    244674 4ll3:A (1.95) BS02 017 ? GO:0004190 ... P03367 24785545 MOAD: Kd=2.7pM
    244675 4ll3:B (1.95) BS01 017 ? GO:0004190 ... P03367 24785545
    244676 4ll3:B (1.95) BS02 017 ? GO:0004190 ... P03367 24785545
    244677 4ll5:A (2.0) BS01 SK8 2.7.11.1 GO:0004672 ... P11309 24531473
    244678 4ll5:A (2.0) BS02 CA 2.7.11.1 GO:0004672 ... P11309 24531473
    244679 4ll7:A (2.31) BS01 DY ? GO:0048309 ... P38272 24522109
    244680 4ll7:C (2.31) BS01 DY ? GO:0048309 ... P38272 24522109
    244681 4ll7:E (2.31) BS01 DY ? GO:0048309 ... P38272 24522109
    244682 4ll7:F (2.31) BS01 DY ? GO:0048309 ... P38272 24522109
    244683 4ll7:H (2.31) BS01 DY ? GO:0048309 ... P38272 24522109
    244684 4llb:A (2.5) BS01 peptide 2.3.1.48 N/A Q92794 24150941
    244685 4llb:A (2.5) BS02 ZN 2.3.1.48 N/A Q92794 24150941
    244686 4llb:A (2.5) BS03 ZN 2.3.1.48 N/A Q92794 24150941
    244687 4llb:A (2.5) BS04 ZN 2.3.1.48 N/A Q92794 24150941
    244688 4llb:A (2.5) BS05 ZN 2.3.1.48 N/A Q92794 24150941
    244689 4llb:B (2.5) BS01 peptide 2.3.1.48 N/A Q92794 24150941
    244690 4llb:B (2.5) BS02 ZN 2.3.1.48 N/A Q92794 24150941
    244691 4llb:B (2.5) BS03 ZN 2.3.1.48 N/A Q92794 24150941
    244692 4llb:B (2.5) BS04 ZN 2.3.1.48 N/A Q92794 24150941
    244693 4llb:B (2.5) BS05 ZN 2.3.1.48 N/A Q92794 24150941
    244694 4llf:A (2.8891) BS01 CA ? GO:0003723 ... P15183 24006433
    244695 4llf:A (2.8891) BS02 CA ? GO:0003723 ... P15183 24006433
    244696 4llf:B (2.8891) BS01 CA ? GO:0003723 ... P15183 24006433
    244697 4llf:B (2.8891) BS02 CA ? GO:0003723 ... P15183 24006433
    244698 4llf:D (2.8891) BS01 CA ? GO:0003723 ... P15183 24006433
    244699 4llf:D (2.8891) BS02 CA ? GO:0003723 ... P15183 24006433
    244700 4llf:E (2.8891) BS01 CA ? GO:0003723 ... P15183 24006433
    244701 4llf:E (2.8891) BS02 CA ? GO:0003723 ... P15183 24006433
    244702 4llf:F (2.8891) BS01 CA ? GO:0003723 ... P15183 24006433
    244703 4llf:F (2.8891) BS02 CA ? GO:0003723 ... P15183 24006433
    244704 4llf:G (2.8891) BS01 CA ? GO:0003723 ... P15183 24006433
    244705 4llf:G (2.8891) BS02 CA ? GO:0003723 ... P15183 24006433
    244706 4llf:H (2.8891) BS01 CA ? GO:0003723 ... P15183 24006433
    244707 4llf:H (2.8891) BS02 CA ? GO:0003723 ... P15183 24006433
    244708 4llf:I (2.8891) BS01 CA ? GO:0003723 ... P15183 24006433
    244709 4llf:I (2.8891) BS02 CA ? GO:0003723 ... P15183 24006433
    244710 4llf:J (2.8891) BS01 CA ? GO:0003723 ... P15183 24006433
    244711 4llf:J (2.8891) BS02 CA ? GO:0003723 ... P15183 24006433
    244712 4llf:K (2.8891) BS01 CA ? GO:0003723 ... P15183 24006433
    244713 4llf:K (2.8891) BS02 CA ? GO:0003723 ... P15183 24006433
    244714 4llf:L (2.8891) BS01 CA ? GO:0003723 ... P15183 24006433
    244715 4llf:L (2.8891) BS02 CA ? GO:0003723 ... P15183 24006433
    244716 4llf:M (2.8891) BS01 CA ? GO:0003723 ... P15183 24006433
    244717 4llf:M (2.8891) BS02 CA ? GO:0003723 ... P15183 24006433
    244718 4llf:N (2.8891) BS01 CA ? GO:0003723 ... P15183 24006433
    244719 4llf:N (2.8891) BS02 CA ? GO:0003723 ... P15183 24006433
    244720 4llf:O (2.8891) BS01 CA ? GO:0003723 ... P15183 24006433
    244721 4llf:P (2.8891) BS01 CA ? GO:0003723 ... P15183 24006433
    244722 4llf:P (2.8891) BS02 CA ? GO:0003723 ... P15183 24006433
    244723 4llg:D (3.7936) BS01 MG N/A GO:0003677 ... N/A 24218560
    244724 4llg:D (3.7936) BS02 ZN N/A GO:0003677 ... N/A 24218560
    244725 4llg:D (3.7936) BS03 ZN N/A GO:0003677 ... N/A 24218560
    244726 4llg:J (3.7936) BS01 MG N/A GO:0003677 ... N/A 24218560
    244727 4llg:J (3.7936) BS02 ZN N/A GO:0003677 ... N/A 24218560
    244728 4llg:J (3.7936) BS03 ZN N/A GO:0003677 ... N/A 24218560
    244729 4llh:A (2.8) BS01 1Y8 ? GO:0005886 ... P54582 25023443
    244730 4llh:A (2.8) BS02 NA ? GO:0005886 ... P54582 25023443
    244731 4llh:A (2.8) BS03 CM5 ? GO:0005886 ... P54582 25023443
    244732 4llh:B (2.8) BS01 1Y8 ? GO:0005886 ... P54582 25023443
    244733 4llh:B (2.8) BS02 NA ? GO:0005886 ... P54582 25023443
    244734 4llh:C (2.8) BS01 CM5 ? GO:0005886 ... P54582 25023443
    244735 4llh:C (2.8) BS02 1Y8 ? GO:0005886 ... P54582 25023443
    244736 4llh:C (2.8) BS03 CM5 ? GO:0005886 ... P54582 25023443
    244737 4llk:A (1.55) BS01 MEW 3.1.4.17 GO:0004114 ... Q9Y233 24375910 MOAD: Ki=990uM
    BindingDB: Ki=990000nM
    244738 4lll:A (3.036) BS01 dna ? GO:0003700 ... Q5Y812 24293644
    244739 4lll:A (3.036) BS02 dna ? GO:0003700 ... Q5Y812 24293644
    244740 4lll:B (3.036) BS01 dna ? GO:0003700 ... Q5Y812 24293644
    244741 4lll:B (3.036) BS02 dna ? GO:0003700 ... Q5Y812 24293644
    244742 4lll:C (3.036) BS01 dna ? GO:0003700 ... Q5Y812 24293644
    244743 4lll:C (3.036) BS02 dna ? GO:0003700 ... Q5Y812 24293644
    244744 4lll:D (3.036) BS01 dna ? GO:0003700 ... Q5Y812 24293644
    244745 4lll:D (3.036) BS02 dna ? GO:0003700 ... Q5Y812 24293644
    244746 4lll:I (3.036) BS01 dna ? GO:0003700 ... Q5Y812 24293644
    244747 4lll:I (3.036) BS02 dna ? GO:0003700 ... Q5Y812 24293644
    244748 4lll:J (3.036) BS01 dna ? GO:0003700 ... Q5Y812 24293644
    244749 4lll:J (3.036) BS02 dna ? GO:0003700 ... Q5Y812 24293644
    244750 4lln:A (2.842) BS01 dna ? GO:0003700 ... Q5Y812 24293644
    244751 4lln:A (2.842) BS02 dna ? GO:0003700 ... Q5Y812 24293644
    244752 4lln:B (2.842) BS01 dna ? GO:0003700 ... Q5Y812 24293644
    244753 4lln:B (2.842) BS02 dna ? GO:0003700 ... Q5Y812 24293644
    244754 4lln:C (2.842) BS01 dna ? GO:0003700 ... Q5Y812 24293644
    244755 4lln:C (2.842) BS02 dna ? GO:0003700 ... Q5Y812 24293644
    244756 4lln:D (2.842) BS01 dna ? GO:0003700 ... Q5Y812 24293644
    244757 4lln:D (2.842) BS02 dna ? GO:0003700 ... Q5Y812 24293644
    244758 4lln:I (2.842) BS01 dna ? GO:0003700 ... Q5Y812 24293644
    244759 4lln:I (2.842) BS02 dna ? GO:0003700 ... Q5Y812 24293644
    244760 4lln:J (2.842) BS01 dna ? GO:0003700 ... Q5Y812 24293644
    244761 4lln:J (2.842) BS02 dna ? GO:0003700 ... Q5Y812 24293644
    244762 4llp:A (1.75) BS01 4ZE 3.1.4.17 GO:0004114 ... Q9Y233 24375910 MOAD: Ki=16uM
    BindingDB: Ki=16000nM
    244763 4llp:A (1.75) BS02 4ZE 3.1.4.17 GO:0004114 ... Q9Y233 24375910 MOAD: Ki=16uM
    BindingDB: Ki=16000nM
    244764 4lls:A (1.5) BS01 IPE 2.5.1.10 GO:0004311 ... Q16CN9 N/A
    244765 4lls:A (1.5) BS02 GST 2.5.1.10 GO:0004311 ... Q16CN9 N/A
    244766 4lls:A (1.5) BS03 CA 2.5.1.10 GO:0004311 ... Q16CN9 N/A
    244767 4lls:A (1.5) BS04 CA 2.5.1.10 GO:0004311 ... Q16CN9 N/A
    244768 4lls:B (1.5) BS01 IPE 2.5.1.10 GO:0004311 ... Q16CN9 N/A
    244769 4lls:B (1.5) BS02 GST 2.5.1.10 GO:0004311 ... Q16CN9 N/A
    244770 4lls:B (1.5) BS03 CA 2.5.1.10 GO:0004311 ... Q16CN9 N/A
    244771 4lls:B (1.5) BS04 CA 2.5.1.10 GO:0004311 ... Q16CN9 N/A
    244772 4llt:A (1.55) BS01 IPE 2.5.1.10 GO:0004311 ... Q16CN9 N/A
    244773 4llt:A (1.55) BS02 IPE 2.5.1.10 GO:0004311 ... Q16CN9 N/A
    244774 4llt:A (1.55) BS03 CA 2.5.1.10 GO:0004311 ... Q16CN9 N/A
    244775 4llt:A (1.55) BS04 CA 2.5.1.10 GO:0004311 ... Q16CN9 N/A
    244776 4llt:B (1.55) BS01 IPE 2.5.1.10 GO:0004311 ... Q16CN9 N/A
    244777 4llt:B (1.55) BS02 IPE 2.5.1.10 GO:0004311 ... Q16CN9 N/A
    244778 4llt:B (1.55) BS03 CA 2.5.1.10 GO:0004311 ... Q16CN9 N/A
    244779 4llt:B (1.55) BS04 CA 2.5.1.10 GO:0004311 ... Q16CN9 N/A
    244780 4llx:A (1.75) BS01 5ZE 3.1.4.17 GO:0004114 ... Q9Y233 24375910 MOAD: Ki=1300uM
    BindingDB: Ki=1300000nM
    244781 4lly:B (1.6) BS01 MG ? GO:0003823 ... P0DOY2 24463572
    244782 4lm0:A (1.66) BS01 5NI 3.1.4.17 GO:0004114 ... Q9Y233 24375910 MOAD: Ki=560uM
    BindingDB: Ki=560000nM
    244783 4lm1:A (1.6) BS01 7ZE 3.1.4.17 GO:0004114 ... Q9Y233 24375910 MOAD: Ki=590uM
    BindingDB: Ki=590000nM
    244784 4lm2:A (1.55) BS01 8ZE 3.1.4.17 GO:0004114 ... Q9Y233 24375910 MOAD: Ki=940uM
    BindingDB: Ki=940000nM
    244785 4lm3:A (1.49) BS01 9ZE 3.1.4.17 GO:0004114 ... Q9Y233 24375910 MOAD: Ki=1200uM
    BindingDB: Ki=1200000nM
    244786 4lm4:A (1.48) BS01 JPZ 3.1.4.17 GO:0004114 ... Q9Y233 24375910 MOAD: Ki=910uM
    244787 4lm5:A (2.25) BS01 Q17 2.7.11.1 GO:0004672 ... P11309 24531473
    244788 4lm6:A (1.7) BS01 DBV ? GO:0030089 ... C0HM11 24979784
    244789 4lm6:B (1.7) BS01 DBV ? GO:0009535 ... A0A075B5G2 24979784
    244790 4lm6:C (1.7) BS01 DBV ? GO:0030089 ... C0HM11 24979784
    244791 4lm6:D (1.7) BS01 DBV ? GO:0009535 ... A0A075B5G2 24979784
    244792 4lm7:A (1.72) BS01 U5P ? GO:0003723 ... P33469 24564608
    244793 4lm8:A (1.8) BS01 HEC ? GO:0016491 ... Q8EG34 26126857
    244794 4lm8:A (1.8) BS02 HEC ? GO:0016491 ... Q8EG34 26126857
    244795 4lm8:A (1.8) BS03 HEC ? GO:0016491 ... Q8EG34 26126857
    244796 4lm8:A (1.8) BS04 HEC ? GO:0016491 ... Q8EG34 26126857
    244797 4lm8:A (1.8) BS05 HEC ? GO:0016491 ... Q8EG34 26126857
    244798 4lm8:A (1.8) BS06 HEC ? GO:0016491 ... Q8EG34 26126857
    244799 4lm8:A (1.8) BS07 HEC ? GO:0016491 ... Q8EG34 26126857
    244800 4lm8:A (1.8) BS08 HEC ? GO:0016491 ... Q8EG34 26126857

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).