SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    244801 4lm8:A (1.8) BS09 HEC ? GO:0016491 ... Q8EG34 26126857
    244802 4lm8:A (1.8) BS10 HEC ? GO:0016491 ... Q8EG34 26126857
    244803 4lm8:A (1.8) BS11 CA ? GO:0016491 ... Q8EG34 26126857
    244804 4lm8:A (1.8) BS12 CA ? GO:0016491 ... Q8EG34 26126857
    244805 4lm8:A (1.8) BS13 CA ? GO:0016491 ... Q8EG34 26126857
    244806 4lm8:A (1.8) BS14 CA ? GO:0016491 ... Q8EG34 26126857
    244807 4lm9:A (1.601) BS01 5GP ? GO:0003723 ... P33469 24564608
    244808 4lma:A (2.3) BS01 PLP 2.5.1.47 GO:0004124 ... A8YBS4 24275508
    244809 4lma:B (2.3) BS01 PLP 2.5.1.47 GO:0004124 ... A8YBS4 24275508
    244810 4lmb:A (1.91) BS01 CYS 2.5.1.47 GO:0004124 ... A8YBP8 24275508
    244811 4lmb:A (1.91) BS02 CYS 2.5.1.47 GO:0004124 ... A8YBP8 24275508
    244812 4lmb:A (1.91) BS03 PLP 2.5.1.47 GO:0004124 ... A8YBP8 24275508
    244813 4lmc:A (1.742) BS01 C5P ? GO:0003723 ... P33469 24564608
    244814 4lmf:A (2.921) BS01 CA 3.4.21.42 GO:0005509 ... P09871 23922389
    244815 4lmf:A (2.921) BS02 CA 3.4.21.42 GO:0005509 ... P09871 23922389
    244816 4lmf:A (2.921) BS03 CA 3.4.21.42 GO:0005509 ... P09871 23922389
    244817 4lmf:B (2.921) BS01 CA 3.4.21.42 GO:0005509 ... P09871 23922389
    244818 4lmf:B (2.921) BS02 CA 3.4.21.42 GO:0005509 ... P09871 23922389
    244819 4lmf:B (2.921) BS03 CA 3.4.21.42 GO:0005509 ... P09871 23922389
    244820 4lmf:C (2.921) BS01 CA 3.4.21.42 GO:0005509 ... P09871 23922389
    244821 4lmf:C (2.921) BS02 CA 3.4.21.42 GO:0005509 ... P09871 23922389
    244822 4lmf:C (2.921) BS03 CA 3.4.21.42 GO:0005509 ... P09871 23922389
    244823 4lmf:D (2.921) BS01 CA 3.4.21.42 GO:0005509 ... P09871 23922389
    244824 4lmf:D (2.921) BS02 CA 3.4.21.42 GO:0005509 ... P09871 23922389
    244825 4lmf:D (2.921) BS03 CA 3.4.21.42 GO:0005509 ... P09871 23922389
    244826 4lmg:A (2.2) BS01 dna ? GO:0000981 ... Q08957 24591629
    244827 4lmg:A (2.2) BS02 dna ? GO:0000981 ... Q08957 24591629
    244828 4lmg:A (2.2) BS03 dna ? GO:0000981 ... Q08957 24591629
    244829 4lmg:A (2.2) BS04 ZN ? GO:0000981 ... Q08957 24591629
    244830 4lmg:B (2.2) BS01 dna ? GO:0000981 ... Q08957 24591629
    244831 4lmg:B (2.2) BS02 ZN ? GO:0000981 ... Q08957 24591629
    244832 4lmg:B (2.2) BS03 ZN ? GO:0000981 ... Q08957 24591629
    244833 4lmg:C (2.2) BS01 dna ? GO:0000981 ... Q08957 24591629
    244834 4lmg:C (2.2) BS02 dna ? GO:0000981 ... Q08957 24591629
    244835 4lmg:C (2.2) BS03 dna ? GO:0000981 ... Q08957 24591629
    244836 4lmg:C (2.2) BS04 ZN ? GO:0000981 ... Q08957 24591629
    244837 4lmg:D (2.2) BS01 dna ? GO:0000981 ... Q08957 24591629
    244838 4lmg:D (2.2) BS02 dna ? GO:0000981 ... Q08957 24591629
    244839 4lmg:D (2.2) BS03 ZN ? GO:0000981 ... Q08957 24591629
    244840 4lmg:D (2.2) BS04 ZN ? GO:0000981 ... Q08957 24591629
    244841 4lmh:A (2.7) BS01 HEC ? GO:0071281 ... Q8EG33 N/A
    244842 4lmh:A (2.7) BS02 HEC ? GO:0071281 ... Q8EG33 N/A
    244843 4lmh:A (2.7) BS03 HEC ? GO:0071281 ... Q8EG33 N/A
    244844 4lmh:A (2.7) BS04 HEC ? GO:0071281 ... Q8EG33 N/A
    244845 4lmh:A (2.7) BS05 HEC ? GO:0071281 ... Q8EG33 N/A
    244846 4lmh:A (2.7) BS06 HEC ? GO:0071281 ... Q8EG33 N/A
    244847 4lmh:A (2.7) BS07 HEC ? GO:0071281 ... Q8EG33 N/A
    244848 4lmh:A (2.7) BS08 HEC ? GO:0071281 ... Q8EG33 N/A
    244849 4lmh:A (2.7) BS09 HEC ? GO:0071281 ... Q8EG33 N/A
    244850 4lmh:A (2.7) BS10 HEC ? GO:0071281 ... Q8EG33 N/A
    244851 4lmh:A (2.7) BS11 CA ? GO:0071281 ... Q8EG33 N/A
    244852 4lmh:B (2.7) BS01 HEC ? GO:0071281 ... Q8EG33 N/A
    244853 4lmh:B (2.7) BS02 HEC ? GO:0071281 ... Q8EG33 N/A
    244854 4lmh:B (2.7) BS03 HEC ? GO:0071281 ... Q8EG33 N/A
    244855 4lmh:B (2.7) BS04 HEC ? GO:0071281 ... Q8EG33 N/A
    244856 4lmh:B (2.7) BS05 HEC ? GO:0071281 ... Q8EG33 N/A
    244857 4lmh:B (2.7) BS06 HEC ? GO:0071281 ... Q8EG33 N/A
    244858 4lmh:B (2.7) BS07 HEC ? GO:0071281 ... Q8EG33 N/A
    244859 4lmh:B (2.7) BS08 HEC ? GO:0071281 ... Q8EG33 N/A
    244860 4lmh:B (2.7) BS09 HEC ? GO:0071281 ... Q8EG33 N/A
    244861 4lmh:B (2.7) BS10 HEC ? GO:0071281 ... Q8EG33 N/A
    244862 4lmh:B (2.7) BS11 CA ? GO:0071281 ... Q8EG33 N/A
    244863 4lmh:C (2.7) BS01 HEC ? GO:0071281 ... Q8EG33 N/A
    244864 4lmh:C (2.7) BS02 HEC ? GO:0071281 ... Q8EG33 N/A
    244865 4lmh:C (2.7) BS03 HEC ? GO:0071281 ... Q8EG33 N/A
    244866 4lmh:C (2.7) BS04 HEC ? GO:0071281 ... Q8EG33 N/A
    244867 4lmh:C (2.7) BS05 HEC ? GO:0071281 ... Q8EG33 N/A
    244868 4lmh:C (2.7) BS06 HEC ? GO:0071281 ... Q8EG33 N/A
    244869 4lmh:C (2.7) BS07 HEC ? GO:0071281 ... Q8EG33 N/A
    244870 4lmh:C (2.7) BS08 HEC ? GO:0071281 ... Q8EG33 N/A
    244871 4lmh:C (2.7) BS09 HEC ? GO:0071281 ... Q8EG33 N/A
    244872 4lmh:C (2.7) BS10 HEC ? GO:0071281 ... Q8EG33 N/A
    244873 4lmh:C (2.7) BS11 CA ? GO:0071281 ... Q8EG33 N/A
    244874 4lmh:D (2.7) BS01 HEC ? GO:0071281 ... Q8EG33 N/A
    244875 4lmh:D (2.7) BS02 HEC ? GO:0071281 ... Q8EG33 N/A
    244876 4lmh:D (2.7) BS03 HEC ? GO:0071281 ... Q8EG33 N/A
    244877 4lmh:D (2.7) BS04 HEC ? GO:0071281 ... Q8EG33 N/A
    244878 4lmh:D (2.7) BS05 HEC ? GO:0071281 ... Q8EG33 N/A
    244879 4lmh:D (2.7) BS06 HEC ? GO:0071281 ... Q8EG33 N/A
    244880 4lmh:D (2.7) BS07 HEC ? GO:0071281 ... Q8EG33 N/A
    244881 4lmh:D (2.7) BS08 HEC ? GO:0071281 ... Q8EG33 N/A
    244882 4lmh:D (2.7) BS09 HEC ? GO:0071281 ... Q8EG33 N/A
    244883 4lmh:D (2.7) BS10 HEC ? GO:0071281 ... Q8EG33 N/A
    244884 4lmh:D (2.7) BS11 CA ? GO:0071281 ... Q8EG33 N/A
    244885 4lmn:A (2.8) BS01 ANP 2.7.12.2 GO:0004672 ... Q02750 23934108
    244886 4lmn:A (2.8) BS02 MG 2.7.12.2 GO:0004672 ... Q02750 23934108
    244887 4lmn:A (2.8) BS03 EUI 2.7.12.2 GO:0004672 ... Q02750 23934108 BindingDB: IC50=4.2nM
    244888 4lmp:A (1.95) BS01 6MD N/A GO:0000286 ... N/A N/A
    244889 4lms:A (1.35) BS01 M1V ? GO:0030089 ... U5T880 24979784
    244890 4lms:A (1.35) BS02 DBV ? GO:0030089 ... U5T880 24979784
    244891 4lms:A (1.35) BS03 DBV ? GO:0030089 ... U5T880 24979784
    244892 4lms:B (1.35) BS01 DBV ? GO:0009535 ... U5T8F2 24979784
    244893 4lms:B (1.35) BS02 M1V ? GO:0009535 ... U5T8F2 24979784
    244894 4lms:B (1.35) BS03 DBV ? GO:0009535 ... U5T8F2 24979784
    244895 4lms:C (1.35) BS01 M1V ? GO:0030089 ... U5T8W5 24979784
    244896 4lms:C (1.35) BS02 M1V ? GO:0030089 ... U5T8W5 24979784
    244897 4lms:C (1.35) BS03 DBV ? GO:0030089 ... U5T8W5 24979784
    244898 4lms:D (1.35) BS01 DBV ? GO:0009535 ... U5T8F2 24979784
    244899 4lmt:A (1.71) BS01 CQD ? GO:0003723 ... P33469 N/A
    244900 4lmu:A (2.38) BS01 QUE 2.7.11.1 GO:0004672 ... P11309 24531473 BindingDB: IC50=1100nM, Kd=25nM
    244901 4lmx:A (1.8) BS01 PEB ? GO:0030089 ... U5TBJ3 24979784
    244902 4lmx:A (1.8) BS02 DBV ? GO:0030089 ... U5TBJ3 24979784
    244903 4lmx:A (1.8) BS03 PEB ? GO:0030089 ... U5TBJ3 24979784
    244904 4lmx:A (1.8) BS04 PEB ? GO:0030089 ... U5TBJ3 24979784
    244905 4lmx:A (1.8) BS05 PEB ? GO:0030089 ... U5TBJ3 24979784
    244906 4lmx:B (1.8) BS01 DBV ? GO:0009535 ... U5T8W0 24979784
    244907 4lmx:B (1.8) BS02 PEB ? GO:0009535 ... U5T8W0 24979784
    244908 4lmx:B (1.8) BS03 PEB ? GO:0009535 ... U5T8W0 24979784
    244909 4lmx:C (1.8) BS01 PEB ? GO:0030089 ... U5TBU5 24979784
    244910 4lmx:C (1.8) BS02 PEB ? GO:0030089 ... U5TBU5 24979784
    244911 4lmx:C (1.8) BS03 DBV ? GO:0030089 ... U5TBU5 24979784
    244912 4lmx:C (1.8) BS04 PEB ? GO:0030089 ... U5TBU5 24979784
    244913 4lmx:C (1.8) BS05 PEB ? GO:0030089 ... U5TBU5 24979784
    244914 4lmx:D (1.8) BS01 DBV ? GO:0009535 ... U5T8W0 24979784
    244915 4lmx:D (1.8) BS02 PEB ? GO:0009535 ... U5T8W0 24979784
    244916 4lmx:D (1.8) BS03 PEB ? GO:0009535 ... U5T8W0 24979784
    244917 4lmx:E (1.8) BS01 PEB ? GO:0030089 ... U5TBJ3 24979784
    244918 4lmx:E (1.8) BS02 DBV ? GO:0030089 ... U5TBJ3 24979784
    244919 4lmx:E (1.8) BS03 PEB ? GO:0030089 ... U5TBJ3 24979784
    244920 4lmx:E (1.8) BS04 PEB ? GO:0030089 ... U5TBJ3 24979784
    244921 4lmx:E (1.8) BS05 PEB ? GO:0030089 ... U5TBJ3 24979784
    244922 4lmx:F (1.8) BS01 DBV ? GO:0009535 ... U5T8W0 24979784
    244923 4lmx:F (1.8) BS02 PEB ? GO:0009535 ... U5T8W0 24979784
    244924 4lmx:F (1.8) BS03 PEB ? GO:0009535 ... U5T8W0 24979784
    244925 4lmx:G (1.8) BS01 PEB ? GO:0030089 ... U5TBJ3 24979784
    244926 4lmx:G (1.8) BS02 PEB ? GO:0030089 ... U5TBJ3 24979784
    244927 4lmx:G (1.8) BS03 DBV ? GO:0030089 ... U5TBJ3 24979784
    244928 4lmx:G (1.8) BS04 PEB ? GO:0030089 ... U5TBJ3 24979784
    244929 4lmx:G (1.8) BS05 PEB ? GO:0030089 ... U5TBJ3 24979784
    244930 4lmx:H (1.8) BS01 PEB ? GO:0009535 ... U5T8W0 24979784
    244931 4lmx:H (1.8) BS02 DBV ? GO:0009535 ... U5T8W0 24979784
    244932 4lmx:H (1.8) BS03 PEB ? GO:0009535 ... U5T8W0 24979784
    244933 4lmx:H (1.8) BS04 PEB ? GO:0009535 ... U5T8W0 24979784
    244934 4lmx:I (1.8) BS01 PEB ? GO:0030089 ... U5TBJ3 24979784
    244935 4lmx:I (1.8) BS02 DBV ? GO:0030089 ... U5TBJ3 24979784
    244936 4lmx:I (1.8) BS03 PEB ? GO:0030089 ... U5TBJ3 24979784
    244937 4lmx:I (1.8) BS04 PEB ? GO:0030089 ... U5TBJ3 24979784
    244938 4lmx:I (1.8) BS05 PEB ? GO:0030089 ... U5TBJ3 24979784
    244939 4lmx:J (1.8) BS01 DBV ? GO:0009535 ... U5T8W0 24979784
    244940 4lmx:J (1.8) BS02 PEB ? GO:0009535 ... U5T8W0 24979784
    244941 4lmx:J (1.8) BS03 PEB ? GO:0009535 ... U5T8W0 24979784
    244942 4lmx:K (1.8) BS01 PEB ? GO:0030089 ... U5TBJ3 24979784
    244943 4lmx:K (1.8) BS02 PEB ? GO:0030089 ... U5TBJ3 24979784
    244944 4lmx:K (1.8) BS03 DBV ? GO:0030089 ... U5TBJ3 24979784
    244945 4lmx:K (1.8) BS04 PEB ? GO:0030089 ... U5TBJ3 24979784
    244946 4lmx:K (1.8) BS05 PEB ? GO:0030089 ... U5TBJ3 24979784
    244947 4lmx:L (1.8) BS01 DBV ? GO:0009535 ... U5T8W0 24979784
    244948 4lmx:L (1.8) BS02 PEB ? GO:0009535 ... U5T8W0 24979784
    244949 4lmx:L (1.8) BS03 PEB ? GO:0009535 ... U5T8W0 24979784
    244950 4lmy:A (1.6) BS01 ZN N/A GO:0003700 ... N/A 24586487
    244951 4lmy:A (1.6) BS02 ZN N/A GO:0003700 ... N/A 24586487
    244952 4lmy:B (1.6) BS01 ZN N/A GO:0003700 ... N/A 24586487
    244953 4lmy:B (1.6) BS02 ZN N/A GO:0003700 ... N/A 24586487
    244954 4lmz:A (2.78) BS01 rna ? GO:0003676 ... O95319 N/A
    244955 4ln1:A (1.9) BS01 CA 1.1.1.27 GO:0003824 ... Q81EP4 N/A
    244956 4ln1:B (1.9) BS01 CA 1.1.1.27 GO:0003824 ... Q81EP4 N/A
    244957 4ln1:C (1.9) BS01 CA 1.1.1.27 GO:0003824 ... Q81EP4 N/A
    244958 4ln1:D (1.9) BS01 CA 1.1.1.27 GO:0003824 ... Q81EP4 N/A
    244959 4ln2:A (1.0) BS01 peptide ? N/A Q9BX66 24878663
    244960 4ln6:A (2.12) BS01 CA ? GO:0019031 ... R4NN21 24027325
    244961 4ln6:C (2.12) BS01 CA ? GO:0019031 ... R4NN21 24027325
    244962 4ln6:E (2.12) BS01 CA ? GO:0019031 ... R4NN21 24027325
    244963 4ln6:G (2.12) BS01 CA ? GO:0019031 ... R4NN21 24027325
    244964 4ln6:I (2.12) BS01 CA ? GO:0019031 ... R4NN21 24027325
    244965 4ln6:K (2.12) BS01 CA ? GO:0019031 ... R4NN21 24027325
    244966 4ln7:A (1.73) BS01 MN N/A GO:0003723 ... N/A 23978130
    244967 4ln7:A (1.73) BS02 MN N/A GO:0003723 ... N/A 23978130
    244968 4ln7:A (1.73) BS03 1ZQ N/A GO:0003723 ... N/A 23978130 MOAD: ic50=0.041uM
    244969 4ln8:A (2.5) BS01 SIA ? GO:0019031 ... R4NN21 24027325
    244970 4ln8:A (2.5) BS02 CA ? GO:0019031 ... R4NN21 24027325
    244971 4ln8:C (2.5) BS01 SIA ? GO:0019031 ... R4NN21 24027325
    244972 4ln8:C (2.5) BS02 CA ? GO:0019031 ... R4NN21 24027325
    244973 4ln8:E (2.5) BS01 SIA ? GO:0019031 ... R4NN21 24027325
    244974 4ln8:E (2.5) BS02 CA ? GO:0019031 ... R4NN21 24027325
    244975 4ln8:G (2.5) BS01 SIA ? GO:0019031 ... R4NN21 24027325
    244976 4ln8:G (2.5) BS02 CA ? GO:0019031 ... R4NN21 24027325
    244977 4ln8:I (2.5) BS01 SIA ? GO:0019031 ... R4NN21 24027325
    244978 4ln8:I (2.5) BS02 CA ? GO:0019031 ... R4NN21 24027325
    244979 4ln8:K (2.5) BS01 SIA ? GO:0019031 ... R4NN21 24027325
    244980 4ln8:K (2.5) BS02 CA ? GO:0019031 ... R4NN21 24027325
    244981 4lna:A (2.1) BS01 ADE 2.4.2.1 GO:0003824 ... D2QIK7 N/A
    244982 4lnb:B (1.752) BS01 FPP 2.5.1.58 GO:0003824 ... Q4WPS9 24347326
    244983 4lnb:B (1.752) BS02 ZN 2.5.1.58 GO:0003824 ... Q4WPS9 24347326
    244984 4lnb:B (1.752) BS03 ED5 2.5.1.58 GO:0003824 ... Q4WPS9 24347326
    244985 4lnc:A (1.84) BS01 GLC 5.3.1.5 GO:0000287 ... P24300 24531475
    244986 4lnc:A (1.84) BS02 MN 5.3.1.5 GO:0000287 ... P24300 24531475
    244987 4lnc:A (1.84) BS03 MN 5.3.1.5 GO:0000287 ... P24300 24531475
    244988 4lnc:A (1.84) BS04 MG 5.3.1.5 GO:0000287 ... P24300 24531475
    244989 4lnd:A (1.92) BS01 MG 3.1.11.2
    3.1.21.-
    GO:0003677 ... P27695 24311596
    244990 4lnd:B (1.92) BS01 MG 3.1.11.2
    3.1.21.-
    GO:0003677 ... P27695 24311596
    244991 4lnd:C (1.92) BS01 MG 3.1.11.2
    3.1.21.-
    GO:0003677 ... P27695 24311596
    244992 4lnf:A (2.949) BS01 MG 6.3.1.2 GO:0000287 ... P12425 24158439
    244993 4lnf:A (2.949) BS02 MG 6.3.1.2 GO:0000287 ... P12425 24158439
    244994 4lnf:A (2.949) BS03 GLN 6.3.1.2 GO:0000287 ... P12425 24158439
    244995 4lnf:B (2.949) BS01 MG 6.3.1.2 GO:0000287 ... P12425 24158439
    244996 4lnf:B (2.949) BS02 MG 6.3.1.2 GO:0000287 ... P12425 24158439
    244997 4lnf:B (2.949) BS03 GLN 6.3.1.2 GO:0000287 ... P12425 24158439
    244998 4lnf:C (2.949) BS01 MG 6.3.1.2 GO:0000287 ... P12425 24158439
    244999 4lnf:C (2.949) BS02 GLN 6.3.1.2 GO:0000287 ... P12425 24158439
    245000 4lnf:D (2.949) BS01 MG 6.3.1.2 GO:0000287 ... P12425 24158439

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).