SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    245601 4lre:B (2.1) BS02 MN 5.4.2.7 GO:0000287 ... Q818Z9 24657930
    245602 4lre:C (2.1) BS01 MN 5.4.2.7 GO:0000287 ... Q818Z9 24657930
    245603 4lre:C (2.1) BS02 MN 5.4.2.7 GO:0000287 ... Q818Z9 24657930
    245604 4lre:C (2.1) BS03 MN 5.4.2.7 GO:0000287 ... Q818Z9 24657930
    245605 4lrf:A (2.0) BS01 MN 5.4.2.7 GO:0000287 ... Q818Z9 24657930
    245606 4lrf:A (2.0) BS02 MN 5.4.2.7 GO:0000287 ... Q818Z9 24657930
    245607 4lrf:A (2.0) BS03 MN 5.4.2.7 GO:0000287 ... Q818Z9 24657930
    245608 4lrf:A (2.0) BS04 HSX 5.4.2.7 GO:0000287 ... Q818Z9 24657930
    245609 4lrf:A (2.0) BS05 HSX 5.4.2.7 GO:0000287 ... Q818Z9 24657930
    245610 4lrf:B (2.0) BS01 MN 5.4.2.7 GO:0000287 ... Q818Z9 24657930
    245611 4lrf:B (2.0) BS02 MN 5.4.2.7 GO:0000287 ... Q818Z9 24657930
    245612 4lrf:B (2.0) BS03 MN 5.4.2.7 GO:0000287 ... Q818Z9 24657930
    245613 4lrf:C (2.0) BS01 MN 5.4.2.7 GO:0000287 ... Q818Z9 24657930
    245614 4lrf:C (2.0) BS02 MN 5.4.2.7 GO:0000287 ... Q818Z9 24657930
    245615 4lrf:C (2.0) BS03 MN 5.4.2.7 GO:0000287 ... Q818Z9 24657930
    245616 4lrg:A (2.21) BS01 1XB ? N/A O60885 24900758 MOAD: ic50=0.026uM
    BindingDB: IC50=26nM
    245617 4lrh:A (2.8) BS01 FOL ? N/A P15328 23851396
    245618 4lrh:B (2.8) BS01 FOL ? N/A P15328 23851396
    245619 4lrh:C (2.8) BS01 FOL ? N/A P15328 23851396
    245620 4lrh:D (2.8) BS01 FOL ? N/A P15328 23851396
    245621 4lrh:E (2.8) BS01 FOL ? N/A P15328 23851396
    245622 4lrh:F (2.8) BS01 FOL ? N/A P15328 23851396
    245623 4lrh:G (2.8) BS01 FOL ? N/A P15328 23851396
    245624 4lrh:H (2.8) BS01 FOL ? N/A P15328 23851396
    245625 4lrj:A (1.619) BS01 ANP 2.7.11.1 N/A Q8X831 24373767
    245626 4lrj:B (1.619) BS01 ANP 2.7.11.1 N/A Q8X831 24373767
    245627 4lrl:A (2.35) BS01 DGT ? GO:0006203 ... Q836G9 24338016
    245628 4lrl:A (2.35) BS02 DGT ? GO:0006203 ... Q836G9 24338016
    245629 4lrl:A (2.35) BS03 TTP ? GO:0006203 ... Q836G9 24338016
    245630 4lrl:B (2.35) BS01 DGT ? GO:0006203 ... Q836G9 24338016
    245631 4lrl:B (2.35) BS02 DGT ? GO:0006203 ... Q836G9 24338016
    245632 4lrl:B (2.35) BS03 TTP ? GO:0006203 ... Q836G9 24338016
    245633 4lrl:B (2.35) BS04 TTP ? GO:0006203 ... Q836G9 24338016
    245634 4lrl:C (2.35) BS01 DGT ? GO:0006203 ... Q836G9 24338016
    245635 4lrl:C (2.35) BS02 DGT ? GO:0006203 ... Q836G9 24338016
    245636 4lrl:C (2.35) BS03 TTP ? GO:0006203 ... Q836G9 24338016
    245637 4lrl:D (2.35) BS01 TTP ? GO:0006203 ... Q836G9 24338016
    245638 4lrl:D (2.35) BS02 DGT ? GO:0006203 ... Q836G9 24338016
    245639 4lrl:D (2.35) BS03 DGT ? GO:0006203 ... Q836G9 24338016
    245640 4lrl:D (2.35) BS04 TTP ? GO:0006203 ... Q836G9 24338016
    245641 4lrm:A (3.526) BS01 YUN 2.7.10.1 GO:0004672 ... P00533 24353160 BindingDB: IC50=2.62nM
    245642 4lrm:B (3.526) BS01 YUN 2.7.10.1 GO:0004672 ... P00533 24353160 BindingDB: IC50=2.62nM
    245643 4lrm:C (3.526) BS01 YUN 2.7.10.1 GO:0004672 ... P00533 24353160 BindingDB: IC50=2.62nM
    245644 4lrm:D (3.526) BS01 YUN 2.7.10.1 GO:0004672 ... P00533 24353160 BindingDB: IC50=2.62nM
    245645 4lrm:E (3.526) BS01 YUN 2.7.10.1 GO:0004672 ... P00533 24353160 BindingDB: IC50=2.62nM
    245646 4lrr:A (2.41) BS01 CF9 2.1.1.45 GO:0004799 ... P0A886 24147825 MOAD: Ki=6uM
    245647 4lrr:A (2.41) BS02 UMP 2.1.1.45 GO:0004799 ... P0A886 24147825
    245648 4lrs:A (1.55) BS01 PYR 4.1.3.39
    4.1.3.43
    GO:0003824 ... D1A3K8 N/A
    245649 4lrs:A (1.55) BS02 MG 4.1.3.39
    4.1.3.43
    GO:0003824 ... D1A3K8 N/A
    245650 4lrs:B (1.55) BS01 NAD 1.2.1.10 GO:0008774 ... D1A3K7 N/A
    245651 4lrt:A (1.5) BS01 PYR 4.1.3.39
    4.1.3.43
    GO:0003824 ... D1A3K8 N/A
    245652 4lrt:A (1.5) BS02 MG 4.1.3.39
    4.1.3.43
    GO:0003824 ... D1A3K8 N/A
    245653 4lrt:B (1.5) BS01 COA 1.2.1.10 GO:0008774 ... D1A3K7 N/A
    245654 4lrt:C (1.5) BS01 PYR 4.1.3.39
    4.1.3.43
    GO:0003824 ... D1A3K8 N/A
    245655 4lrt:C (1.5) BS02 MG 4.1.3.39
    4.1.3.43
    GO:0003824 ... D1A3K8 N/A
    245656 4lrt:D (1.5) BS01 COA 1.2.1.10 GO:0008774 ... D1A3K7 N/A
    245657 4lrw:A (2.151) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 24256730
    245658 4lrw:B (2.151) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 24256730
    245659 4lrz:A (2.32) BS01 ADP 2.7.1.121 GO:0000287 ... P76014 24440518
    245660 4lrz:A (2.32) BS02 MG 2.7.1.121 GO:0000287 ... P76014 24440518
    245661 4lrz:A (2.32) BS03 MG 2.7.1.121 GO:0000287 ... P76014 24440518
    245662 4lrz:B (2.32) BS01 ADP 2.7.1.121 GO:0000287 ... P76014 24440518
    245663 4lrz:B (2.32) BS02 MG 2.7.1.121 GO:0000287 ... P76014 24440518
    245664 4lrz:B (2.32) BS03 MG 2.7.1.121 GO:0000287 ... P76014 24440518
    245665 4lrz:C (2.32) BS01 ADP 2.7.1.121 GO:0000287 ... P76014 24440518
    245666 4lrz:C (2.32) BS02 MG 2.7.1.121 GO:0000287 ... P76014 24440518
    245667 4lrz:C (2.32) BS03 MG 2.7.1.121 GO:0000287 ... P76014 24440518
    245668 4lrz:D (2.32) BS01 ADP 2.7.1.121 GO:0000287 ... P76014 24440518
    245669 4lrz:D (2.32) BS02 MG 2.7.1.121 GO:0000287 ... P76014 24440518
    245670 4lrz:D (2.32) BS03 MG 2.7.1.121 GO:0000287 ... P76014 24440518
    245671 4ls0:A (2.07) BS01 FMN 1.3.5.2 GO:0004152 ... Q02127 N/A
    245672 4ls0:A (2.07) BS02 B3B 1.3.5.2 GO:0004152 ... Q02127 N/A
    245673 4ls1:A (2.2) BS01 FMN 1.3.5.2 GO:0004152 ... Q02127 N/A
    245674 4ls1:A (2.2) BS02 3X2 1.3.5.2 GO:0004152 ... Q02127 N/A
    245675 4ls2:A (2.27) BS01 FMN 1.3.5.2 GO:0004152 ... Q02127 N/A
    245676 4ls2:A (2.27) BS02 3XS 1.3.5.2 GO:0004152 ... Q02127 N/A
    245677 4ls3:A (1.7) BS01 HIS ? GO:0071281 ... B5Z9J2 24330328
    245678 4ls3:A (1.7) BS02 HIS ? GO:0071281 ... B5Z9J2 24330328
    245679 4ls3:B (1.7) BS01 HIS ? GO:0071281 ... B5Z9J2 24330328
    245680 4ls3:B (1.7) BS02 HIS ? GO:0071281 ... B5Z9J2 24330328
    245681 4ls7:A (1.674) BS01 1X9 2.3.1.179 GO:0004315 ... O34340 24641521
    245682 4ls7:B (1.674) BS01 1X9 2.3.1.179 GO:0004315 ... O34340 24641521
    245683 4ls8:A (2.1) BS01 1XG 2.3.1.179 GO:0004315 ... O34340 24641521
    245684 4ls8:B (2.1) BS01 1XG 2.3.1.179 GO:0004315 ... O34340 24641521
    245685 4ls9:A (2.2) BS01 MN ? GO:0003676 ... A0QVM9 24878921
    245686 4ls9:B (2.2) BS01 MN ? GO:0003676 ... A0QVM9 24878921
    245687 4lsa:A (2.5) BS01 BLD 2.7.10.1
    2.7.11.1
    N/A O22476 23929946
    245688 4lsb:A (1.8) BS01 MG ? GO:0003824 ... B4EFV2 N/A
    245689 4lsb:B (1.8) BS01 MG ? GO:0003824 ... B4EFV2 N/A
    245690 4lsc:A (1.529) BS01 FUC 2.7.10.1
    2.7.11.1
    N/A Q94AG2 23929946
    245691 4lse:A (2.1) BS01 MG ? GO:0001530 ... P02931 24106986
    245692 4lse:B (2.1) BS01 MG ? GO:0001530 ... P02931 24106986
    245693 4lse:C (2.1) BS01 MG ? GO:0001530 ... P02931 24106986
    245694 4lse:C (2.1) BS02 MG ? GO:0001530 ... P02931 24106986
    245695 4lsi:A (2.089) BS01 MG ? GO:0001530 ... P02931 24106986
    245696 4lsi:A (2.089) BS02 MG ? GO:0001530 ... P02931 24106986
    245697 4lsi:B (2.089) BS01 C8E ? GO:0001530 ... P02931 24106986
    245698 4lsi:B (2.089) BS02 C8E ? GO:0001530 ... P02931 24106986
    245699 4lsi:B (2.089) BS03 MG ? GO:0001530 ... P02931 24106986
    245700 4lsi:B (2.089) BS04 MG ? GO:0001530 ... P02931 24106986
    245701 4lsi:C (2.089) BS01 C8E ? GO:0001530 ... P02931 24106986
    245702 4lsi:C (2.089) BS02 MG ? GO:0001530 ... P02931 24106986
    245703 4lsi:C (2.089) BS03 MG ? GO:0001530 ... P02931 24106986
    245704 4lsi:C (2.089) BS04 MG ? GO:0001530 ... P02931 24106986
    245705 4lsi:C (2.089) BS05 MG ? GO:0001530 ... P02931 24106986
    245706 4lsj:A (2.35) BS01 peptide ? N/A P04150 24446728
    245707 4lsj:A (2.35) BS02 LSJ ? N/A P04150 24446728 MOAD: Ki=0.268nM
    BindingDB: Ki=0.268000nM
    245708 4lsk:QB (3.48001) BS01 rna ? GO:0003735 ... P80371 25128388
    245709 4lsk:QC (3.48001) BS01 rna ? GO:0003676 ... P80372 25128388
    245710 4lsk:QD (3.48001) BS01 rna ? GO:0003723 ... P80373 25128388
    245711 4lsk:QD (3.48001) BS02 ZN ? GO:0003723 ... P80373 25128388
    245712 4lsk:QE (3.48001) BS01 rna ? GO:0003723 ... Q5SHQ5 25128388
    245713 4lsk:QF (3.48001) BS01 rna ? GO:0003735 ... Q5SLP8 25128388
    245714 4lsk:QF (3.48001) BS02 MG ? GO:0003735 ... Q5SLP8 25128388
    245715 4lsk:QG (3.48001) BS01 rna ? GO:0000049 ... P17291 25128388
    245716 4lsk:QH (3.48001) BS01 rna N/A GO:0003735 ... P0DOY9 25128388
    245717 4lsk:QH (3.48001) BS02 MG N/A GO:0003735 ... P0DOY9 25128388
    245718 4lsk:QI (3.48001) BS01 rna ? GO:0003723 ... P80374 25128388
    245719 4lsk:QI (3.48001) BS02 rna ? GO:0003723 ... P80374 25128388
    245720 4lsk:QJ (3.48001) BS01 rna ? GO:0000049 ... Q5SHN7 25128388
    245721 4lsk:QK (3.48001) BS01 rna ? GO:0003735 ... P80376 25128388
    245722 4lsk:QL (3.48001) BS01 rna ? GO:0000049 ... Q5SHN3 25128388
    245723 4lsk:QM (3.48001) BS01 rna ? GO:0000049 ... P80377 25128388
    245724 4lsk:QM (3.48001) BS02 rna ? GO:0000049 ... P80377 25128388
    245725 4lsk:QM (3.48001) BS03 MG ? GO:0000049 ... P80377 25128388
    245726 4lsk:QN (3.48001) BS01 rna N/A GO:0003735 ... P0DOY6 25128388
    245727 4lsk:QN (3.48001) BS02 ZN N/A GO:0003735 ... P0DOY6 25128388
    245728 4lsk:QO (3.48001) BS01 rna ? GO:0003735 ... Q5SJ76 25128388
    245729 4lsk:QO (3.48001) BS02 rna ? GO:0003735 ... Q5SJ76 25128388
    245730 4lsk:QP (3.48001) BS01 rna ? GO:0003735 ... Q5SJH3 25128388
    245731 4lsk:QQ (3.48001) BS01 rna N/A GO:0003735 ... P0DOY7 25128388
    245732 4lsk:QR (3.48001) BS01 rna ? GO:0003735 ... Q5SLQ0 25128388
    245733 4lsk:QS (3.48001) BS01 rna ? GO:0000028 ... Q5SHP2 25128388
    245734 4lsk:QT (3.48001) BS01 rna ? GO:0003723 ... P80380 25128388
    245735 4lsk:R0 (3.48001) BS01 rna ? GO:0003735 ... P60493 25128388
    245736 4lsk:R0 (3.48001) BS02 rna ? GO:0003735 ... P60493 25128388
    245737 4lsk:R0 (3.48001) BS03 rna ? GO:0003735 ... P60493 25128388
    245738 4lsk:R1 (3.48001) BS01 rna ? GO:0003735 ... P60494 25128388
    245739 4lsk:R2 (3.48001) BS01 rna ? GO:0003735 ... Q5SHP6 25128388
    245740 4lsk:R3 (3.48001) BS01 rna ? GO:0003735 ... Q5SHQ6 25128388
    245741 4lsk:R3 (3.48001) BS02 rna ? GO:0003735 ... Q5SHQ6 25128388
    245742 4lsk:R4 (3.48001) BS01 rna ? GO:0003735 ... Q5SJE1 25128388
    245743 4lsk:R5 (3.48001) BS01 rna ? GO:0003735 ... P80339 25128388
    245744 4lsk:R6 (3.48001) BS01 rna ? GO:0003735 ... P35871 25128388
    245745 4lsk:R7 (3.48001) BS01 rna ? GO:0003735 ... P80340 25128388
    245746 4lsk:R8 (3.48001) BS01 rna ? GO:0003735 ... Q5SKU1 25128388
    245747 4lsk:R9 (3.48001) BS01 rna ? GO:0003735 ... Q5SHR2 25128388
    245748 4lsk:RD (3.48001) BS01 rna ? GO:0002181 ... P60405 25128388
    245749 4lsk:RD (3.48001) BS02 MG ? GO:0002181 ... P60405 25128388
    245750 4lsk:RD (3.48001) BS03 MG ? GO:0002181 ... P60405 25128388
    245751 4lsk:RE (3.48001) BS01 rna ? GO:0003735 ... Q5SHN8 25128388
    245752 4lsk:RF (3.48001) BS01 rna ? GO:0003735 ... Q5SHN9 25128388
    245753 4lsk:RG (3.48001) BS01 rna ? GO:0000049 ... Q5SHQ0 25128388
    245754 4lsk:RG (3.48001) BS02 rna ? GO:0000049 ... Q5SHQ0 25128388
    245755 4lsk:RH (3.48001) BS01 rna N/A GO:0002181 ... P0DOY8 25128388
    245756 4lsk:RI (3.48001) BS01 rna ? GO:0003735 ... Q5SLQ1 25128388
    245757 4lsk:RN (3.48001) BS01 rna ? GO:0003729 ... P60488 25128388
    245758 4lsk:RO (3.48001) BS01 rna ? GO:0003735 ... Q5SHP8 25128388
    245759 4lsk:RO (3.48001) BS02 rna ? GO:0003735 ... Q5SHP8 25128388
    245760 4lsk:RP (3.48001) BS01 rna ? GO:0003735 ... Q5SHQ7 25128388
    245761 4lsk:RQ (3.48001) BS01 rna ? GO:0003735 ... P60489 25128388
    245762 4lsk:RQ (3.48001) BS02 rna ? GO:0003735 ... P60489 25128388
    245763 4lsk:RR (3.48001) BS01 rna ? GO:0003735 ... Q9Z9H5 25128388
    245764 4lsk:RS (3.48001) BS01 rna ? GO:0003735 ... Q5SHQ4 25128388
    245765 4lsk:RS (3.48001) BS02 rna ? GO:0003735 ... Q5SHQ4 25128388
    245766 4lsk:RT (3.48001) BS01 rna ? GO:0003735 ... P60490 25128388
    245767 4lsk:RT (3.48001) BS02 rna ? GO:0003735 ... P60490 25128388
    245768 4lsk:RU (3.48001) BS01 rna ? GO:0000027 ... P60491 25128388
    245769 4lsk:RV (3.48001) BS01 rna ? GO:0003723 ... P60492 25128388
    245770 4lsk:RW (3.48001) BS01 rna ? GO:0003735 ... Q5SHP3 25128388
    245771 4lsk:RX (3.48001) BS01 rna ? GO:0003735 ... Q5SHP0 25128388
    245772 4lsk:RY (3.48001) BS01 rna ? GO:0003723 ... Q5SHP9 25128388
    245773 4lsk:RZ (3.48001) BS01 rna ? GO:0003723 ... Q5SHZ1 25128388
    245774 4lsk:RZ (3.48001) BS02 rna ? GO:0003723 ... Q5SHZ1 25128388
    245775 4lsk:XB (3.48001) BS01 rna ? GO:0003735 ... P80371 25128388
    245776 4lsk:XC (3.48001) BS01 rna ? GO:0003676 ... P80372 25128388
    245777 4lsk:XD (3.48001) BS01 rna ? GO:0003723 ... P80373 25128388
    245778 4lsk:XD (3.48001) BS02 ZN ? GO:0003723 ... P80373 25128388
    245779 4lsk:XE (3.48001) BS01 rna ? GO:0003723 ... Q5SHQ5 25128388
    245780 4lsk:XF (3.48001) BS01 rna ? GO:0003735 ... Q5SLP8 25128388
    245781 4lsk:XG (3.48001) BS01 rna ? GO:0000049 ... P17291 25128388
    245782 4lsk:XH (3.48001) BS01 rna N/A GO:0003735 ... P0DOY9 25128388
    245783 4lsk:XI (3.48001) BS01 rna ? GO:0003723 ... P80374 25128388
    245784 4lsk:XI (3.48001) BS02 rna ? GO:0003723 ... P80374 25128388
    245785 4lsk:XJ (3.48001) BS01 rna ? GO:0000049 ... Q5SHN7 25128388
    245786 4lsk:XK (3.48001) BS01 rna ? GO:0003735 ... P80376 25128388
    245787 4lsk:XL (3.48001) BS01 rna ? GO:0000049 ... Q5SHN3 25128388
    245788 4lsk:XM (3.48001) BS01 rna ? GO:0000049 ... P80377 25128388
    245789 4lsk:XM (3.48001) BS02 rna ? GO:0000049 ... P80377 25128388
    245790 4lsk:XM (3.48001) BS03 MG ? GO:0000049 ... P80377 25128388
    245791 4lsk:XN (3.48001) BS01 rna N/A GO:0003735 ... P0DOY6 25128388
    245792 4lsk:XN (3.48001) BS02 ZN N/A GO:0003735 ... P0DOY6 25128388
    245793 4lsk:XO (3.48001) BS01 rna ? GO:0003735 ... Q5SJ76 25128388
    245794 4lsk:XO (3.48001) BS02 rna ? GO:0003735 ... Q5SJ76 25128388
    245795 4lsk:XP (3.48001) BS01 rna ? GO:0003735 ... Q5SJH3 25128388
    245796 4lsk:XQ (3.48001) BS01 rna N/A GO:0003735 ... P0DOY7 25128388
    245797 4lsk:XR (3.48001) BS01 rna ? GO:0003735 ... Q5SLQ0 25128388
    245798 4lsk:XS (3.48001) BS01 rna ? GO:0000028 ... Q5SHP2 25128388
    245799 4lsk:XT (3.48001) BS01 rna ? GO:0003723 ... P80380 25128388
    245800 4lsk:Y0 (3.48001) BS01 rna ? GO:0003735 ... P60493 25128388

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).