SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    24401 1jb0:A (2.5) BS40 CLA 1.97.1.12 GO:0000287 ... P0A405 11418848
    24402 1jb0:A (2.5) BS41 CLA 1.97.1.12 GO:0000287 ... P0A405 11418848
    24403 1jb0:A (2.5) BS42 CLA 1.97.1.12 GO:0000287 ... P0A405 11418848
    24404 1jb0:A (2.5) BS43 CLA 1.97.1.12 GO:0000287 ... P0A405 11418848
    24405 1jb0:A (2.5) BS44 CLA 1.97.1.12 GO:0000287 ... P0A405 11418848
    24406 1jb0:A (2.5) BS45 CLA 1.97.1.12 GO:0000287 ... P0A405 11418848
    24407 1jb0:A (2.5) BS46 CLA 1.97.1.12 GO:0000287 ... P0A405 11418848
    24408 1jb0:A (2.5) BS47 PQN 1.97.1.12 GO:0000287 ... P0A405 11418848
    24409 1jb0:A (2.5) BS48 SF4 1.97.1.12 GO:0000287 ... P0A405 11418848
    24410 1jb0:A (2.5) BS49 CLA 1.97.1.12 GO:0000287 ... P0A405 11418848
    24411 1jb0:A (2.5) BS50 CLA 1.97.1.12 GO:0000287 ... P0A405 11418848
    24412 1jb0:A (2.5) BS51 CLA 1.97.1.12 GO:0000287 ... P0A405 11418848
    24413 1jb0:A (2.5) BS52 CLA 1.97.1.12 GO:0000287 ... P0A405 11418848
    24414 1jb0:B (2.5) BS01 peptide 1.97.1.12 GO:0000287 ... P0A407 11418848
    24415 1jb0:B (2.5) BS02 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24416 1jb0:B (2.5) BS03 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24417 1jb0:B (2.5) BS04 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24418 1jb0:B (2.5) BS05 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24419 1jb0:B (2.5) BS06 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24420 1jb0:B (2.5) BS07 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24421 1jb0:B (2.5) BS08 SF4 1.97.1.12 GO:0000287 ... P0A407 11418848
    24422 1jb0:B (2.5) BS09 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24423 1jb0:B (2.5) BS10 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24424 1jb0:B (2.5) BS11 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24425 1jb0:B (2.5) BS12 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24426 1jb0:B (2.5) BS13 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24427 1jb0:B (2.5) BS14 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24428 1jb0:B (2.5) BS15 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24429 1jb0:B (2.5) BS16 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24430 1jb0:B (2.5) BS17 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24431 1jb0:B (2.5) BS18 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24432 1jb0:B (2.5) BS19 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24433 1jb0:B (2.5) BS20 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24434 1jb0:B (2.5) BS21 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24435 1jb0:B (2.5) BS22 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24436 1jb0:B (2.5) BS23 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24437 1jb0:B (2.5) BS24 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24438 1jb0:B (2.5) BS25 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24439 1jb0:B (2.5) BS26 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24440 1jb0:B (2.5) BS27 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24441 1jb0:B (2.5) BS28 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24442 1jb0:B (2.5) BS29 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24443 1jb0:B (2.5) BS30 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24444 1jb0:B (2.5) BS31 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24445 1jb0:B (2.5) BS32 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24446 1jb0:B (2.5) BS33 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24447 1jb0:B (2.5) BS34 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24448 1jb0:B (2.5) BS35 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24449 1jb0:B (2.5) BS36 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24450 1jb0:B (2.5) BS37 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24451 1jb0:B (2.5) BS38 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24452 1jb0:B (2.5) BS39 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24453 1jb0:B (2.5) BS40 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24454 1jb0:B (2.5) BS41 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24455 1jb0:B (2.5) BS42 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24456 1jb0:B (2.5) BS43 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24457 1jb0:B (2.5) BS44 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24458 1jb0:B (2.5) BS45 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24459 1jb0:B (2.5) BS46 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24460 1jb0:B (2.5) BS47 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24461 1jb0:B (2.5) BS48 CLA 1.97.1.12 GO:0000287 ... P0A407 11418848
    24462 1jb0:B (2.5) BS49 PQN 1.97.1.12 GO:0000287 ... P0A407 11418848
    24463 1jb0:C (2.5) BS01 SF4 1.97.1.12 GO:0009055 ... P0A415 11418848
    24464 1jb0:C (2.5) BS02 SF4 1.97.1.12 GO:0009055 ... P0A415 11418848
    24465 1jb0:F (2.5) BS01 CLA ? GO:0009522 ... P0A401 11418848
    24466 1jb0:F (2.5) BS02 CLA ? GO:0009522 ... P0A401 11418848
    24467 1jb0:F (2.5) BS03 CLA ? GO:0009522 ... P0A401 11418848
    24468 1jb0:F (2.5) BS04 CLA ? GO:0009522 ... P0A401 11418848
    24469 1jb0:I (2.5) BS01 CLA ? GO:0009522 ... P0A427 11418848
    24470 1jb0:I (2.5) BS02 CLA ? GO:0009522 ... P0A427 11418848
    24471 1jb0:I (2.5) BS03 CLA ? GO:0009522 ... P0A427 11418848
    24472 1jb0:I (2.5) BS04 CLA ? GO:0009522 ... P0A427 11418848
    24473 1jb0:J (2.5) BS01 CLA ? GO:0009522 ... P0A429 11418848
    24474 1jb0:J (2.5) BS02 CLA ? GO:0009522 ... P0A429 11418848
    24475 1jb0:J (2.5) BS03 CLA ? GO:0009522 ... P0A429 11418848
    24476 1jb0:J (2.5) BS04 CLA ? GO:0009522 ... P0A429 11418848
    24477 1jb0:J (2.5) BS05 CLA ? GO:0009522 ... P0A429 11418848
    24478 1jb0:J (2.5) BS06 CLA ? GO:0009522 ... P0A429 11418848
    24479 1jb0:K (2.5) BS01 CLA ? GO:0009522 ... P0A425 11418848
    24480 1jb0:L (2.5) BS01 CLA ? GO:0009522 ... Q8DGB4 11418848
    24481 1jb0:L (2.5) BS02 CLA ? GO:0009522 ... Q8DGB4 11418848
    24482 1jb0:L (2.5) BS03 CLA ? GO:0009522 ... Q8DGB4 11418848
    24483 1jb0:L (2.5) BS04 CA ? GO:0009522 ... Q8DGB4 11418848
    24484 1jb0:L (2.5) BS05 CLA ? GO:0009522 ... Q8DGB4 11418848
    24485 1jb0:L (2.5) BS06 CLA ? GO:0009522 ... Q8DGB4 11418848
    24486 1jb0:L (2.5) BS07 CLA ? GO:0009522 ... Q8DGB4 11418848
    24487 1jb0:M (2.5) BS01 CLA ? GO:0015979 ... P0A403 11418848
    24488 1jb0:M (2.5) BS02 CLA ? GO:0015979 ... P0A403 11418848
    24489 1jb7:A (1.86) BS01 dna ? GO:0000723 ... P29549 11428895
    24490 1jb7:A (1.86) BS02 dna ? GO:0000723 ... P29549 11428895
    24491 1jb7:B (1.86) BS01 dna ? GO:0000781 ... P16458 11428895
    24492 1jb9:A (1.7) BS01 FAD 1.18.1.2 GO:0003954 ... Q41736 11724563
    24493 1jba:A (-1.00) BS01 CA 4.6.1.2 GO:0001750 ... P51177 10383444
    24494 1jba:A (-1.00) BS02 CA 4.6.1.2 GO:0001750 ... P51177 10383444
    24495 1jba:A (-1.00) BS03 CA 4.6.1.2 GO:0001750 ... P51177 10383444
    24496 1jbc:A (1.15) BS01 MN ? GO:0030246 ... P02866 15299577
    24497 1jbc:A (1.15) BS02 CA ? GO:0030246 ... P02866 15299577
    24498 1jbd:A (-1.00) BS01 peptide ? GO:0005515 ... P60615 11814338
    24499 1jbp:E (2.2) BS01 peptide 2.7.11.11 GO:0000287 ... P05132 8003955
    24500 1jbp:E (2.2) BS02 ADP 2.7.11.11 GO:0000287 ... P05132 8003955
    24501 1jbq:A (2.6) BS01 HEM 4.2.1.22 GO:0004122 ... P35520 11483494
    24502 1jbq:A (2.6) BS02 PLP 4.2.1.22 GO:0004122 ... P35520 11483494
    24503 1jbq:B (2.6) BS01 HEM 4.2.1.22 GO:0004122 ... P35520 11483494
    24504 1jbq:B (2.6) BS02 PLP 4.2.1.22 GO:0004122 ... P35520 11483494
    24505 1jbq:C (2.6) BS01 HEM 4.2.1.22 GO:0004122 ... P35520 11483494
    24506 1jbq:C (2.6) BS02 PLP 4.2.1.22 GO:0004122 ... P35520 11483494
    24507 1jbq:D (2.6) BS01 HEM 4.2.1.22 GO:0004122 ... P35520 11483494
    24508 1jbq:D (2.6) BS02 PLP 4.2.1.22 GO:0004122 ... P35520 11483494
    24509 1jbq:E (2.6) BS01 HEM 4.2.1.22 GO:0004122 ... P35520 11483494
    24510 1jbq:E (2.6) BS02 PLP 4.2.1.22 GO:0004122 ... P35520 11483494
    24511 1jbq:F (2.6) BS01 HEM 4.2.1.22 GO:0004122 ... P35520 11483494
    24512 1jbq:F (2.6) BS02 PLP 4.2.1.22 GO:0004122 ... P35520 11483494
    24513 1jbr:A (2.15) BS01 rna 3.1.27.- GO:0003723 ... P67876 11685244
    24514 1jbr:B (2.15) BS01 rna 3.1.27.- GO:0003723 ... P67876 11685244
    24515 1jbs:A (1.97) BS01 rna 3.1.27.- GO:0003723 ... P67876 11685244
    24516 1jbs:B (1.97) BS01 rna 3.1.27.- GO:0003723 ... P67876 11685244
    24517 1jbt:A (2.7) BS01 rna 3.1.27.- GO:0003723 ... P67876 11685244
    24518 1jbt:B (2.7) BS01 rna 3.1.27.- GO:0003723 ... P67876 11685244
    24519 1jbu:H (2.0) BS01 peptide 3.4.21.21 GO:0004252 ... P08709 11470437
    24520 1jbv:A (1.95) BS01 MG 6.3.2.17 GO:0004326 ... P15925 11501996
    24521 1jbv:A (1.95) BS02 ACP 6.3.2.17 GO:0004326 ... P15925 11501996
    24522 1jbw:A (1.85) BS01 MG 6.3.2.17 GO:0004326 ... P15925 11501996
    24523 1jbw:A (1.85) BS02 ACQ 6.3.2.17 GO:0004326 ... P15925 11501996
    24524 1jbw:A (1.85) BS03 TMF 6.3.2.17 GO:0004326 ... P15925 11501996
    24525 1jbz:A (1.5) BS01 MG ? GO:0006091 ... P42212 12501176
    24526 1jc2:A (-1.00) BS01 CA ? GO:0005509 ... P02588 11513585
    24527 1jc2:A (-1.00) BS02 CA ? GO:0005509 ... P02588 11513585
    24528 1jc9:A (2.01) BS01 CA ? GO:0005576 ... Q9U8W8 11707569
    24529 1jca:B (2.5) BS01 peptide ? GO:0005179 ... P01308 11779231
    24530 1jca:B (2.5) BS02 peptide ? GO:0005179 ... P01308 11779231
    24531 1jcc:A (1.7) BS01 ZN ? GO:0005515 ... P69776 12741822
    24532 1jcc:B (1.7) BS01 ZN ? GO:0005515 ... P69776 12741822
    24533 1jcc:C (1.7) BS01 ZN ? GO:0005515 ... P69776 12741822
    24534 1jcg:A (3.1) BS01 ANP ? GO:0000902 ... Q9WZ57 11544518
    24535 1jci:A (1.9) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 11851415
    24536 1jcj:A (1.1) BS01 HPD 4.1.2.4 GO:0004139 ... P0A6L0 11598300
    24537 1jcj:B (1.1) BS01 HPD 4.1.2.4 GO:0004139 ... P0A6L0 11598300
    24538 1jcl:A (1.05) BS01 HPD 4.1.2.4 GO:0004139 ... P0A6L0 11598300
    24539 1jcl:B (1.05) BS01 HPD 4.1.2.4 GO:0004139 ... P0A6L0 11598300
    24540 1jcm:P (2.1) BS01 PO4 4.1.1.48
    5.3.1.24
    GO:0004425 ... P00909 11856350
    24541 1jcm:P (2.1) BS02 137 4.1.1.48
    5.3.1.24
    GO:0004425 ... P00909 11856350
    24542 1jcn:A (2.5) BS01 CPR 1.1.1.205 GO:0000166 ... P20839 N/A
    24543 1jcn:B (2.5) BS01 CPR 1.1.1.205 GO:0000166 ... P20839 N/A
    24544 1jco:B (-1.00) BS01 peptide ? GO:0005179 ... P01308 11524020
    24545 1jcq:A (2.3) BS01 GLC 2.5.1.58
    2.5.1.59
    GO:0004660 ... P49354 11687658
    24546 1jcq:A (2.3) BS02 FPP 2.5.1.58
    2.5.1.59
    GO:0004660 ... P49354 11687658 BindingDB: Kd=2.0nM
    24547 1jcq:A (2.3) BS03 739 2.5.1.58
    2.5.1.59
    GO:0004660 ... P49354 11687658
    24548 1jcq:B (2.3) BS01 GLC 2.5.1.58 GO:0003824 ... P49356 11687658
    24549 1jcq:B (2.3) BS02 FRU 2.5.1.58 GO:0003824 ... P49356 11687658
    24550 1jcq:B (2.3) BS03 ZN 2.5.1.58 GO:0003824 ... P49356 11687658
    24551 1jcq:B (2.3) BS04 FPP 2.5.1.58 GO:0003824 ... P49356 11687658
    24552 1jcq:B (2.3) BS05 739 2.5.1.58 GO:0003824 ... P49356 11687658
    24553 1jcr:A (2.0) BS01 FPP 2.5.1.58
    2.5.1.59
    GO:0004660 ... Q04631 11687658
    24554 1jcr:B (2.0) BS01 peptide 2.5.1.58 GO:0003824 ... Q02293 11687658
    24555 1jcr:B (2.0) BS02 ZN 2.5.1.58 GO:0003824 ... Q02293 11687658
    24556 1jcr:B (2.0) BS03 FPP 2.5.1.58 GO:0003824 ... Q02293 11687658
    24557 1jcs:A (2.2) BS01 peptide 2.5.1.58
    2.5.1.59
    GO:0004660 ... Q04631 11687658
    24558 1jcs:A (2.2) BS02 FII 2.5.1.58
    2.5.1.59
    GO:0004660 ... Q04631 11687658
    24559 1jcs:B (2.2) BS01 peptide 2.5.1.58 GO:0003824 ... Q02293 11687658
    24560 1jcs:B (2.2) BS02 ZN 2.5.1.58 GO:0003824 ... Q02293 11687658
    24561 1jcs:B (2.2) BS03 FII 2.5.1.58 GO:0003824 ... Q02293 11687658
    24562 1jct:A (2.75) BS01 MG 4.2.1.40 GO:0000287 ... P0AES2 11513584
    24563 1jct:A (2.75) BS02 GKR 4.2.1.40 GO:0000287 ... P0AES2 11513584
    24564 1jct:B (2.75) BS01 MG 4.2.1.40 GO:0000287 ... P0AES2 11513584
    24565 1jct:B (2.75) BS02 GKR 4.2.1.40 GO:0000287 ... P0AES2 11513584
    24566 1jcv:A (1.55) BS01 CU 1.15.1.1 GO:0004784 ... P00445 8652572
    24567 1jcv:A (1.55) BS02 ZN 1.15.1.1 GO:0004784 ... P00445 8652572
    24568 1jcx:A (1.8) BS01 PAI 2.5.1.55 GO:0005737 ... O66496 11747443 MOAD: Ki=7uM
    24569 1jcx:B (1.8) BS01 PAI 2.5.1.55 GO:0005737 ... O66496 11747443 MOAD: Ki=7uM
    24570 1jcy:A (1.9) BS01 R5P 2.5.1.55 GO:0005737 ... O66496 11747443
    24571 1jcy:A (1.9) BS02 PEP 2.5.1.55 GO:0005737 ... O66496 11747443
    24572 1jcy:B (1.9) BS01 PEP 2.5.1.55 GO:0005737 ... O66496 11747443
    24573 1jcz:A (1.55) BS01 ZN 4.2.1.1 GO:0004089 ... O43570 11493685
    24574 1jcz:B (1.55) BS01 ZN 4.2.1.1 GO:0004089 ... O43570 11493685
    24575 1jd0:A (1.5) BS01 ZN 4.2.1.1 GO:0004089 ... O43570 11493685
    24576 1jd0:A (1.5) BS02 AZM 4.2.1.1 GO:0004089 ... O43570 11493685 BindingDB: Ki=5.7nM, Kd=130nM, IC50=60nM
    24577 1jd0:B (1.5) BS01 ZN 4.2.1.1 GO:0004089 ... O43570 11493685
    24578 1jd0:B (1.5) BS02 AZM 4.2.1.1 GO:0004089 ... O43570 11493685 BindingDB: Ki=5.7nM, Kd=130nM, IC50=60nM
    24579 1jd2:G (3.0) BS01 MG 3.4.99.46 GO:0003674 ... P21243 11493007
    24580 1jd2:H (3.0) BS01 peptide 3.4.25.1 GO:0004298 ... P25043 11493007
    24581 1jd2:H (3.0) BS02 MG 3.4.25.1 GO:0004298 ... P25043 11493007
    24582 1jd2:I (3.0) BS01 peptide 3.4.99.46 GO:0005515 ... P25451 11493007
    24583 1jd2:I (3.0) BS02 MG 3.4.99.46 GO:0005515 ... P25451 11493007
    24584 1jd2:K (3.0) BS01 MG 3.4.25.1 GO:0004298 ... P30656 11493007
    24585 1jd2:L (3.0) BS01 MG 3.4.99.46 GO:0003674 ... P23724 11493007
    24586 1jd2:N (3.0) BS01 MG 3.4.25.1 GO:0004175 ... P38624 11493007
    24587 1jd2:O (3.0) BS01 peptide 3.4.25.1 GO:0004298 ... P25043 11493007
    24588 1jd2:P (3.0) BS01 peptide 3.4.99.46 GO:0005515 ... P25451 11493007
    24589 1jd4:A (2.7) BS01 ZN 2.3.2.27 N/A Q24306 11511363
    24590 1jd4:B (2.7) BS01 ZN 2.3.2.27 N/A Q24306 11511363
    24591 1jd5:A (1.9) BS01 peptide 2.3.2.27 N/A Q24306 11511363
    24592 1jd5:A (1.9) BS02 ZN 2.3.2.27 N/A Q24306 11511363
    24593 1jd6:A (2.7) BS01 peptide 2.3.2.27 N/A Q24306 11511363
    24594 1jd6:A (2.7) BS02 ZN 2.3.2.27 N/A Q24306 11511363
    24595 1jd7:A (2.25) BS01 CA 3.2.1.1 GO:0003824 ... P29957 12021442
    24596 1jd7:A (2.25) BS02 CL 3.2.1.1 GO:0003824 ... P29957 12021442
    24597 1jd9:A (2.5) BS01 CA 3.2.1.1 GO:0003824 ... P29957 12021442
    24598 1jda:A (2.2) BS01 CA 3.2.1.60 GO:0004556 ... P13507 9281429
    24599 1jda:A (2.2) BS02 CA 3.2.1.60 GO:0004556 ... P13507 9281429
    24600 1jdb:B (2.1) BS01 MN 6.3.4.16
    6.3.5.5
    GO:0000166 ... P00968 10089390

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).