SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    245801 4lsk:Y0 (3.48001) BS02 rna ? GO:0003735 ... P60493 25128388
    245802 4lsk:Y0 (3.48001) BS03 rna ? GO:0003735 ... P60493 25128388
    245803 4lsk:Y1 (3.48001) BS01 rna ? GO:0003735 ... P60494 25128388
    245804 4lsk:Y2 (3.48001) BS01 rna ? GO:0003735 ... Q5SHP6 25128388
    245805 4lsk:Y3 (3.48001) BS01 rna ? GO:0003735 ... Q5SHQ6 25128388
    245806 4lsk:Y3 (3.48001) BS02 rna ? GO:0003735 ... Q5SHQ6 25128388
    245807 4lsk:Y4 (3.48001) BS01 rna ? GO:0003735 ... Q5SJE1 25128388
    245808 4lsk:Y4 (3.48001) BS02 rna ? GO:0003735 ... Q5SJE1 25128388
    245809 4lsk:Y5 (3.48001) BS01 rna ? GO:0003735 ... P80339 25128388
    245810 4lsk:Y6 (3.48001) BS01 rna ? GO:0003735 ... P35871 25128388
    245811 4lsk:Y7 (3.48001) BS01 rna ? GO:0003735 ... P80340 25128388
    245812 4lsk:Y8 (3.48001) BS01 rna ? GO:0003735 ... Q5SKU1 25128388
    245813 4lsk:Y9 (3.48001) BS01 rna ? GO:0003735 ... Q5SHR2 25128388
    245814 4lsk:YD (3.48001) BS01 rna ? GO:0002181 ... P60405 25128388
    245815 4lsk:YD (3.48001) BS02 MG ? GO:0002181 ... P60405 25128388
    245816 4lsk:YE (3.48001) BS01 rna ? GO:0003735 ... Q5SHN8 25128388
    245817 4lsk:YF (3.48001) BS01 rna ? GO:0003735 ... Q5SHN9 25128388
    245818 4lsk:YG (3.48001) BS01 rna ? GO:0000049 ... Q5SHQ0 25128388
    245819 4lsk:YG (3.48001) BS02 rna ? GO:0000049 ... Q5SHQ0 25128388
    245820 4lsk:YH (3.48001) BS01 rna N/A GO:0002181 ... P0DOY8 25128388
    245821 4lsk:YI (3.48001) BS01 rna ? GO:0003735 ... Q5SLQ1 25128388
    245822 4lsk:YI (3.48001) BS02 rna ? GO:0003735 ... Q5SLQ1 25128388
    245823 4lsk:YN (3.48001) BS01 rna ? GO:0003729 ... P60488 25128388
    245824 4lsk:YO (3.48001) BS01 rna ? GO:0003735 ... Q5SHP8 25128388
    245825 4lsk:YO (3.48001) BS02 rna ? GO:0003735 ... Q5SHP8 25128388
    245826 4lsk:YP (3.48001) BS01 rna ? GO:0003735 ... Q5SHQ7 25128388
    245827 4lsk:YP (3.48001) BS02 MG ? GO:0003735 ... Q5SHQ7 25128388
    245828 4lsk:YQ (3.48001) BS01 rna ? GO:0003735 ... P60489 25128388
    245829 4lsk:YQ (3.48001) BS02 rna ? GO:0003735 ... P60489 25128388
    245830 4lsk:YR (3.48001) BS01 rna ? GO:0003735 ... Q9Z9H5 25128388
    245831 4lsk:YS (3.48001) BS01 rna ? GO:0003735 ... Q5SHQ4 25128388
    245832 4lsk:YS (3.48001) BS02 rna ? GO:0003735 ... Q5SHQ4 25128388
    245833 4lsk:YT (3.48001) BS01 rna ? GO:0003735 ... P60490 25128388
    245834 4lsk:YT (3.48001) BS02 rna ? GO:0003735 ... P60490 25128388
    245835 4lsk:YU (3.48001) BS01 rna ? GO:0000027 ... P60491 25128388
    245836 4lsk:YV (3.48001) BS01 rna ? GO:0003723 ... P60492 25128388
    245837 4lsk:YW (3.48001) BS01 rna ? GO:0003735 ... Q5SHP3 25128388
    245838 4lsk:YX (3.48001) BS01 rna ? GO:0003735 ... Q5SHP0 25128388
    245839 4lsk:YY (3.48001) BS01 rna ? GO:0003723 ... Q5SHP9 25128388
    245840 4lsk:YZ (3.48001) BS01 rna ? GO:0003723 ... Q5SHZ1 25128388
    245841 4lsk:YZ (3.48001) BS02 rna ? GO:0003723 ... Q5SHZ1 25128388
    245842 4lsl:A (2.69) BS01 1YQ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 24289305
    245843 4lsm:A (1.65) BS01 NAD 1.2.1.12 GO:0004365 ... Q4DZT1 N/A
    245844 4lsm:B (1.65) BS01 NAD 1.2.1.12 GO:0004365 ... Q4DZT1 N/A
    245845 4lsn:A (3.1) BS01 1YR 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 24289305
    245846 4lsq:G (2.25) BS01 BU3 ? GO:0019031 ... Q0ED31 23911655
    245847 4lsx:A (3.302) BS01 BLD 2.7.10.1
    2.7.11.1
    N/A O22476 23929946
    245848 4lsx:B (3.302) BS01 BLD 2.7.10.1
    2.7.11.1
    N/A O22476 23929946
    245849 4lsx:C (3.302) BS01 BLD 2.7.10.1
    2.7.11.1
    N/A Q94AG2 23929946
    245850 4lsx:D (3.302) BS01 BLD 2.7.10.1
    2.7.11.1
    N/A Q94AG2 23929946
    245851 4lsy:B (1.895) BS01 CU ? GO:0004521 ... O25554 24060809
    245852 4lt0:A (2.1) BS01 QPT 3.2.1.17 GO:0003796 ... P00698 25195881
    245853 4lt2:A (2.0) BS01 QPT 3.2.1.17 GO:0003796 ... P00698 N/A
    245854 4lt3:A (2.0) BS01 QPT 3.2.1.17 GO:0003796 ... P00698 25195881
    245855 4lt4:A (1.69) BS01 ARG 3.2.2.22 GO:0017148 ... D9J2T9 N/A
    245856 4lt5:A (2.893) BS01 dna 1.14.11.80 GO:0005506 ... D2W6T1 24390346
    245857 4lt5:A (2.893) BS02 dna 1.14.11.80 GO:0005506 ... D2W6T1 24390346
    245858 4lt5:A (2.893) BS03 MN 1.14.11.80 GO:0005506 ... D2W6T1 24390346
    245859 4lt6:A (2.79) BS01 3AT 2.7.7.19 GO:0003723 ... Q9BWT3 24076191
    245860 4lt6:A (2.79) BS02 CA 2.7.7.19 GO:0003723 ... Q9BWT3 24076191
    245861 4lt6:B (2.79) BS01 3AT 2.7.7.19 GO:0003723 ... Q9BWT3 24076191
    245862 4lt6:B (2.79) BS02 CA 2.7.7.19 GO:0003723 ... Q9BWT3 24076191
    245863 4lt7:A (2.5) BS01 CA ? GO:0016020 ... P47709 24302762
    245864 4lt8:QB (3.14) BS01 rna ? GO:0003735 ... P80371 25128388
    245865 4lt8:QC (3.14) BS01 rna ? GO:0003676 ... P80372 25128388
    245866 4lt8:QD (3.14) BS01 rna ? GO:0003723 ... P80373 25128388
    245867 4lt8:QD (3.14) BS02 ZN ? GO:0003723 ... P80373 25128388
    245868 4lt8:QE (3.14) BS01 rna ? GO:0003723 ... Q5SHQ5 25128388
    245869 4lt8:QF (3.14) BS01 rna ? GO:0003735 ... Q5SLP8 25128388
    245870 4lt8:QF (3.14) BS02 MG ? GO:0003735 ... Q5SLP8 25128388
    245871 4lt8:QG (3.14) BS01 rna ? GO:0000049 ... P17291 25128388
    245872 4lt8:QH (3.14) BS01 rna N/A GO:0003735 ... P0DOY9 25128388
    245873 4lt8:QH (3.14) BS02 MG N/A GO:0003735 ... P0DOY9 25128388
    245874 4lt8:QI (3.14) BS01 rna ? GO:0003723 ... P80374 25128388
    245875 4lt8:QI (3.14) BS02 rna ? GO:0003723 ... P80374 25128388
    245876 4lt8:QJ (3.14) BS01 rna ? GO:0000049 ... Q5SHN7 25128388
    245877 4lt8:QJ (3.14) BS02 rna ? GO:0000049 ... Q5SHN7 25128388
    245878 4lt8:QK (3.14) BS01 rna ? GO:0003735 ... P80376 25128388
    245879 4lt8:QL (3.14) BS01 rna ? GO:0000049 ... Q5SHN3 25128388
    245880 4lt8:QM (3.14) BS01 rna ? GO:0000049 ... P80377 25128388
    245881 4lt8:QM (3.14) BS02 rna ? GO:0000049 ... P80377 25128388
    245882 4lt8:QM (3.14) BS03 MG ? GO:0000049 ... P80377 25128388
    245883 4lt8:QN (3.14) BS01 rna N/A GO:0003735 ... P0DOY6 25128388
    245884 4lt8:QN (3.14) BS02 ZN N/A GO:0003735 ... P0DOY6 25128388
    245885 4lt8:QO (3.14) BS01 rna ? GO:0003735 ... Q5SJ76 25128388
    245886 4lt8:QO (3.14) BS02 rna ? GO:0003735 ... Q5SJ76 25128388
    245887 4lt8:QP (3.14) BS01 rna ? GO:0003735 ... Q5SJH3 25128388
    245888 4lt8:QQ (3.14) BS01 rna N/A GO:0003735 ... P0DOY7 25128388
    245889 4lt8:QR (3.14) BS01 rna ? GO:0003735 ... Q5SLQ0 25128388
    245890 4lt8:QS (3.14) BS01 rna ? GO:0000028 ... Q5SHP2 25128388
    245891 4lt8:QT (3.14) BS01 rna ? GO:0003723 ... P80380 25128388
    245892 4lt8:R0 (3.14) BS01 rna ? GO:0003735 ... P60493 25128388
    245893 4lt8:R0 (3.14) BS02 rna ? GO:0003735 ... P60493 25128388
    245894 4lt8:R0 (3.14) BS03 rna ? GO:0003735 ... P60493 25128388
    245895 4lt8:R1 (3.14) BS01 rna ? GO:0003735 ... P60494 25128388
    245896 4lt8:R2 (3.14) BS01 rna ? GO:0003735 ... Q5SHP6 25128388
    245897 4lt8:R3 (3.14) BS01 rna ? GO:0003735 ... Q5SHQ6 25128388
    245898 4lt8:R3 (3.14) BS02 rna ? GO:0003735 ... Q5SHQ6 25128388
    245899 4lt8:R4 (3.14) BS01 rna ? GO:0003735 ... Q5SJE1 25128388
    245900 4lt8:R4 (3.14) BS02 rna ? GO:0003735 ... Q5SJE1 25128388
    245901 4lt8:R5 (3.14) BS01 rna ? GO:0003735 ... P80339 25128388
    245902 4lt8:R6 (3.14) BS01 rna ? GO:0003735 ... P35871 25128388
    245903 4lt8:R7 (3.14) BS01 rna ? GO:0003735 ... P80340 25128388
    245904 4lt8:R8 (3.14) BS01 rna ? GO:0003735 ... Q5SKU1 25128388
    245905 4lt8:R9 (3.14) BS01 rna ? GO:0003735 ... Q5SHR2 25128388
    245906 4lt8:RD (3.14) BS01 rna ? GO:0002181 ... P60405 25128388
    245907 4lt8:RD (3.14) BS02 rna ? GO:0002181 ... P60405 25128388
    245908 4lt8:RD (3.14) BS03 MG ? GO:0002181 ... P60405 25128388
    245909 4lt8:RD (3.14) BS04 MG ? GO:0002181 ... P60405 25128388
    245910 4lt8:RE (3.14) BS01 rna ? GO:0003735 ... Q5SHN8 25128388
    245911 4lt8:RF (3.14) BS01 rna ? GO:0003735 ... Q5SHN9 25128388
    245912 4lt8:RG (3.14) BS01 rna ? GO:0000049 ... Q5SHQ0 25128388
    245913 4lt8:RG (3.14) BS02 rna ? GO:0000049 ... Q5SHQ0 25128388
    245914 4lt8:RH (3.14) BS01 rna N/A GO:0002181 ... P0DOY8 25128388
    245915 4lt8:RI (3.14) BS01 rna ? GO:0003735 ... Q5SLQ1 25128388
    245916 4lt8:RN (3.14) BS01 rna ? GO:0003729 ... P60488 25128388
    245917 4lt8:RO (3.14) BS01 rna ? GO:0003735 ... Q5SHP8 25128388
    245918 4lt8:RO (3.14) BS02 rna ? GO:0003735 ... Q5SHP8 25128388
    245919 4lt8:RP (3.14) BS01 rna ? GO:0003735 ... Q5SHQ7 25128388
    245920 4lt8:RQ (3.14) BS01 rna ? GO:0003735 ... P60489 25128388
    245921 4lt8:RQ (3.14) BS02 rna ? GO:0003735 ... P60489 25128388
    245922 4lt8:RR (3.14) BS01 rna ? GO:0003735 ... Q9Z9H5 25128388
    245923 4lt8:RS (3.14) BS01 rna ? GO:0003735 ... Q5SHQ4 25128388
    245924 4lt8:RS (3.14) BS02 rna ? GO:0003735 ... Q5SHQ4 25128388
    245925 4lt8:RT (3.14) BS01 rna ? GO:0003735 ... P60490 25128388
    245926 4lt8:RT (3.14) BS02 rna ? GO:0003735 ... P60490 25128388
    245927 4lt8:RU (3.14) BS01 rna ? GO:0000027 ... P60491 25128388
    245928 4lt8:RV (3.14) BS01 rna ? GO:0003723 ... P60492 25128388
    245929 4lt8:RW (3.14) BS01 rna ? GO:0003735 ... Q5SHP3 25128388
    245930 4lt8:RX (3.14) BS01 rna ? GO:0003735 ... Q5SHP0 25128388
    245931 4lt8:RY (3.14) BS01 rna ? GO:0003723 ... Q5SHP9 25128388
    245932 4lt8:RZ (3.14) BS01 rna ? GO:0003723 ... Q5SHZ1 25128388
    245933 4lt8:RZ (3.14) BS02 rna ? GO:0003723 ... Q5SHZ1 25128388
    245934 4lt8:XB (3.14) BS01 rna ? GO:0003735 ... P80371 25128388
    245935 4lt8:XC (3.14) BS01 rna ? GO:0003676 ... P80372 25128388
    245936 4lt8:XD (3.14) BS01 rna ? GO:0003723 ... P80373 25128388
    245937 4lt8:XD (3.14) BS02 ZN ? GO:0003723 ... P80373 25128388
    245938 4lt8:XE (3.14) BS01 rna ? GO:0003723 ... Q5SHQ5 25128388
    245939 4lt8:XF (3.14) BS01 rna ? GO:0003735 ... Q5SLP8 25128388
    245940 4lt8:XG (3.14) BS01 rna ? GO:0000049 ... P17291 25128388
    245941 4lt8:XH (3.14) BS01 rna N/A GO:0003735 ... P0DOY9 25128388
    245942 4lt8:XI (3.14) BS01 rna ? GO:0003723 ... P80374 25128388
    245943 4lt8:XI (3.14) BS02 rna ? GO:0003723 ... P80374 25128388
    245944 4lt8:XJ (3.14) BS01 rna ? GO:0000049 ... Q5SHN7 25128388
    245945 4lt8:XK (3.14) BS01 rna ? GO:0003735 ... P80376 25128388
    245946 4lt8:XL (3.14) BS01 rna ? GO:0000049 ... Q5SHN3 25128388
    245947 4lt8:XM (3.14) BS01 rna ? GO:0000049 ... P80377 25128388
    245948 4lt8:XM (3.14) BS02 rna ? GO:0000049 ... P80377 25128388
    245949 4lt8:XM (3.14) BS03 MG ? GO:0000049 ... P80377 25128388
    245950 4lt8:XN (3.14) BS01 rna N/A GO:0003735 ... P0DOY6 25128388
    245951 4lt8:XN (3.14) BS02 ZN N/A GO:0003735 ... P0DOY6 25128388
    245952 4lt8:XO (3.14) BS01 rna ? GO:0003735 ... Q5SJ76 25128388
    245953 4lt8:XO (3.14) BS02 rna ? GO:0003735 ... Q5SJ76 25128388
    245954 4lt8:XP (3.14) BS01 rna ? GO:0003735 ... Q5SJH3 25128388
    245955 4lt8:XQ (3.14) BS01 rna N/A GO:0003735 ... P0DOY7 25128388
    245956 4lt8:XR (3.14) BS01 rna ? GO:0003735 ... Q5SLQ0 25128388
    245957 4lt8:XS (3.14) BS01 rna ? GO:0000028 ... Q5SHP2 25128388
    245958 4lt8:XT (3.14) BS01 rna ? GO:0003723 ... P80380 25128388
    245959 4lt8:Y0 (3.14) BS01 rna ? GO:0003735 ... P60493 25128388
    245960 4lt8:Y0 (3.14) BS02 rna ? GO:0003735 ... P60493 25128388
    245961 4lt8:Y0 (3.14) BS03 rna ? GO:0003735 ... P60493 25128388
    245962 4lt8:Y1 (3.14) BS01 rna ? GO:0003735 ... P60494 25128388
    245963 4lt8:Y2 (3.14) BS01 rna ? GO:0003735 ... Q5SHP6 25128388
    245964 4lt8:Y3 (3.14) BS01 rna ? GO:0003735 ... Q5SHQ6 25128388
    245965 4lt8:Y3 (3.14) BS02 rna ? GO:0003735 ... Q5SHQ6 25128388
    245966 4lt8:Y4 (3.14) BS01 rna ? GO:0003735 ... Q5SJE1 25128388
    245967 4lt8:Y5 (3.14) BS01 rna ? GO:0003735 ... P80339 25128388
    245968 4lt8:Y6 (3.14) BS01 rna ? GO:0003735 ... P35871 25128388
    245969 4lt8:Y7 (3.14) BS01 rna ? GO:0003735 ... P80340 25128388
    245970 4lt8:Y8 (3.14) BS01 rna ? GO:0003735 ... Q5SKU1 25128388
    245971 4lt8:Y9 (3.14) BS01 rna ? GO:0003735 ... Q5SHR2 25128388
    245972 4lt8:YD (3.14) BS01 rna ? GO:0002181 ... P60405 25128388
    245973 4lt8:YD (3.14) BS02 MG ? GO:0002181 ... P60405 25128388
    245974 4lt8:YE (3.14) BS01 rna ? GO:0003735 ... Q5SHN8 25128388
    245975 4lt8:YF (3.14) BS01 rna ? GO:0003735 ... Q5SHN9 25128388
    245976 4lt8:YG (3.14) BS01 rna ? GO:0000049 ... Q5SHQ0 25128388
    245977 4lt8:YG (3.14) BS02 rna ? GO:0000049 ... Q5SHQ0 25128388
    245978 4lt8:YH (3.14) BS01 rna N/A GO:0002181 ... P0DOY8 25128388
    245979 4lt8:YI (3.14) BS01 rna ? GO:0003735 ... Q5SLQ1 25128388
    245980 4lt8:YI (3.14) BS02 rna ? GO:0003735 ... Q5SLQ1 25128388
    245981 4lt8:YN (3.14) BS01 rna ? GO:0003729 ... P60488 25128388
    245982 4lt8:YO (3.14) BS01 rna ? GO:0003735 ... Q5SHP8 25128388
    245983 4lt8:YO (3.14) BS02 rna ? GO:0003735 ... Q5SHP8 25128388
    245984 4lt8:YP (3.14) BS01 rna ? GO:0003735 ... Q5SHQ7 25128388
    245985 4lt8:YQ (3.14) BS01 rna ? GO:0003735 ... P60489 25128388
    245986 4lt8:YQ (3.14) BS02 rna ? GO:0003735 ... P60489 25128388
    245987 4lt8:YR (3.14) BS01 rna ? GO:0003735 ... Q9Z9H5 25128388
    245988 4lt8:YS (3.14) BS01 rna ? GO:0003735 ... Q5SHQ4 25128388
    245989 4lt8:YS (3.14) BS02 rna ? GO:0003735 ... Q5SHQ4 25128388
    245990 4lt8:YT (3.14) BS01 rna ? GO:0003735 ... P60490 25128388
    245991 4lt8:YT (3.14) BS02 rna ? GO:0003735 ... P60490 25128388
    245992 4lt8:YU (3.14) BS01 rna ? GO:0000027 ... P60491 25128388
    245993 4lt8:YV (3.14) BS01 rna ? GO:0003723 ... P60492 25128388
    245994 4lt8:YW (3.14) BS01 rna ? GO:0003735 ... Q5SHP3 25128388
    245995 4lt8:YX (3.14) BS01 rna ? GO:0003735 ... Q5SHP0 25128388
    245996 4lt8:YY (3.14) BS01 rna ? GO:0003723 ... Q5SHP9 25128388
    245997 4lt8:YZ (3.14) BS01 rna ? GO:0003723 ... Q5SHZ1 25128388
    245998 4lt8:YZ (3.14) BS02 rna ? GO:0003723 ... Q5SHZ1 25128388
    245999 4lta:A (2.04) BS01 MN 5.3.1.9 GO:0004347 ... P83194 N/A
    246000 4lta:A (2.04) BS02 PA5 5.3.1.9 GO:0004347 ... P83194 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).