SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 1224 1225 1226 1227 1228 1229 1230 1231 1232 1233 1234 1235 1236 1237 1238 1239 1240 1241 1242 1243 1244 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    246601 4m06:D (2.6) BS01 HEM 1.13.11.49 GO:0016491 ... B3U4H7 24364531
    246602 4m06:E (2.6) BS01 HEM 1.13.11.49 GO:0016491 ... B3U4H7 24364531
    246603 4m07:A (2.5) BS01 HEM 1.13.11.49 GO:0016491 ... B3U4H7 24364531
    246604 4m07:B (2.5) BS01 HEM 1.13.11.49 GO:0016491 ... B3U4H7 24364531
    246605 4m07:C (2.5) BS01 HEM 1.13.11.49 GO:0016491 ... B3U4H7 24364531
    246606 4m07:D (2.5) BS01 HEM 1.13.11.49 GO:0016491 ... B3U4H7 24364531
    246607 4m07:E (2.5) BS01 HEM 1.13.11.49 GO:0016491 ... B3U4H7 24364531
    246608 4m08:A (2.799) BS01 HEM 1.13.11.49 GO:0016491 ... B3U4H7 24364531
    246609 4m08:B (2.799) BS01 HEM 1.13.11.49 GO:0016491 ... B3U4H7 24364531
    246610 4m08:C (2.799) BS01 HEM 1.13.11.49 GO:0016491 ... B3U4H7 24364531
    246611 4m08:D (2.799) BS01 HEM 1.13.11.49 GO:0016491 ... B3U4H7 24364531
    246612 4m08:E (2.799) BS01 HEM 1.13.11.49 GO:0016491 ... B3U4H7 24364531
    246613 4m09:A (2.45) BS01 HEM 1.13.11.49 GO:0016491 ... B3U4H7 24364531
    246614 4m09:B (2.45) BS01 HEM 1.13.11.49 GO:0016491 ... B3U4H7 24364531
    246615 4m09:C (2.45) BS01 HEM 1.13.11.49 GO:0016491 ... B3U4H7 24364531
    246616 4m09:D (2.45) BS01 HEM 1.13.11.49 GO:0016491 ... B3U4H7 24364531
    246617 4m09:E (2.45) BS01 HEM 1.13.11.49 GO:0016491 ... B3U4H7 24364531
    246618 4m0a:A (1.85) BS01 dna 2.7.7.7 GO:0003677 ... Q9NP87 24487959
    246619 4m0a:A (1.85) BS02 dna 2.7.7.7 GO:0003677 ... Q9NP87 24487959
    246620 4m0a:A (1.85) BS03 dna 2.7.7.7 GO:0003677 ... Q9NP87 24487959
    246621 4m0a:A (1.85) BS04 MG 2.7.7.7 GO:0003677 ... Q9NP87 24487959
    246622 4m0a:A (1.85) BS05 MG 2.7.7.7 GO:0003677 ... Q9NP87 24487959
    246623 4m0a:A (1.85) BS06 MN 2.7.7.7 GO:0003677 ... Q9NP87 24487959
    246624 4m0c:A (2.073) BS01 FMN 1.6.5.-
    1.7.1.17
    GO:0009055 ... Q81UB2 N/A
    246625 4m0c:A (2.073) BS02 ZN 1.6.5.-
    1.7.1.17
    GO:0009055 ... Q81UB2 N/A
    246626 4m0c:B (2.073) BS01 FMN 1.6.5.-
    1.7.1.17
    GO:0009055 ... Q81UB2 N/A
    246627 4m0e:A (2.0) BS01 1YL 3.1.1.7 GO:0001507 ... P22303 24900610 MOAD: Ki=0.7uM
    BindingDB: Ki=600nM, IC50=1000nM
    246628 4m0e:B (2.0) BS01 1YL 3.1.1.7 GO:0001507 ... P22303 24900610 MOAD: Ki=0.7uM
    BindingDB: Ki=600nM, IC50=1000nM
    246629 4m0f:A (2.304) BS01 1YK 3.1.1.7 GO:0001507 ... P22303 24900610 MOAD: Ki=1.7nM
    BindingDB: Ki=1.7nM, IC50=8nM
    246630 4m0f:B (2.304) BS01 1YK 3.1.1.7 GO:0001507 ... P22303 24900610 MOAD: Ki=1.7nM
    BindingDB: Ki=1.7nM, IC50=8nM
    246631 4m0k:A (1.4) BS01 AMP 2.4.2.7 GO:0002055 ... D0MGF4 N/A
    246632 4m0k:B (1.4) BS01 AMP 2.4.2.7 GO:0002055 ... D0MGF4 N/A
    246633 4m0k:C (1.4) BS01 AMP 2.4.2.7 GO:0002055 ... D0MGF4 N/A
    246634 4m0k:D (1.4) BS01 AMP 2.4.2.7 GO:0002055 ... D0MGF4 N/A
    246635 4m0l:A (2.6) BS01 GDP 3.6.5.3 GO:0000049 ... Q980A5 24598735
    246636 4m0l:B (2.6) BS01 GDP 3.6.5.3 GO:0000049 ... Q980A5 24598735
    246637 4m0l:C (2.6) BS01 GDP 3.6.5.3 GO:0000049 ... Q980A5 24598735
    246638 4m0l:C (2.6) BS02 MG 3.6.5.3 GO:0000049 ... Q980A5 24598735
    246639 4m0l:D (2.6) BS01 GDP 3.6.5.3 GO:0000049 ... Q980A5 24598735
    246640 4m0l:E (2.6) BS01 GDP 3.6.5.3 GO:0000049 ... Q980A5 24598735
    246641 4m0l:F (2.6) BS01 GDP 3.6.5.3 GO:0000049 ... Q980A5 24598735
    246642 4m0r:A (1.96) BS01 644 2.4.2.18 GO:0000162 ... P9WFX5 24623674 MOAD: Ki=6.2uM
    246643 4m0r:B (1.96) BS01 644 2.4.2.18 GO:0000162 ... P9WFX5 24623674 MOAD: Ki=6.2uM
    246644 4m0v:A (1.83) BS01 MN N/A GO:0004519 ... N/A 24531464
    246645 4m0v:A (1.83) BS02 MN N/A GO:0004519 ... N/A 24531464
    246646 4m0v:B (1.83) BS01 MN N/A GO:0004519 ... N/A 24531464
    246647 4m0v:B (1.83) BS02 MN N/A GO:0004519 ... N/A 24531464
    246648 4m0v:C (1.83) BS01 MN N/A GO:0004519 ... N/A 24531464
    246649 4m0v:C (1.83) BS02 MN N/A GO:0004519 ... N/A 24531464
    246650 4m0v:D (1.83) BS01 MN N/A GO:0004519 ... N/A 24531464
    246651 4m0v:D (1.83) BS02 MN N/A GO:0004519 ... N/A 24531464
    246652 4m0w:A (1.4) BS01 ZN 2.7.7.50
    3.4.19.12
    3.4.22.-
    3.4.22.69
    GO:0006508 ... P0C6U8 24531491
    246653 4m0x:A (2.7) BS01 MN ? GO:0003824 ... Q8G9L1 24768773
    246654 4m0x:B (2.7) BS01 MN ? GO:0003824 ... Q8G9L1 24768773
    246655 4m0y:A (1.7) BS01 M0Y 2.7.10.2 GO:0004672 ... Q08881 24593284 MOAD: Kd=0.35uM
    246656 4m0y:A (1.7) BS02 M0Y 2.7.10.2 GO:0004672 ... Q08881 24593284 MOAD: Kd=0.35uM
    246657 4m0z:A (2.0) BS01 M0Z 2.7.10.2 GO:0004672 ... Q08881 24593284 MOAD: Kd=6.4uM
    246658 4m0z:A (2.0) BS02 M0Z 2.7.10.2 GO:0004672 ... Q08881 24593284 MOAD: Kd=6.4uM
    246659 4m10:A (2.01) BS01 HEM 1.14.99.1 GO:0001516 ... Q05769 24425867
    246660 4m10:A (2.01) BS02 ICD 1.14.99.1 GO:0001516 ... Q05769 24425867
    246661 4m10:B (2.01) BS01 HEM 1.14.99.1 GO:0001516 ... Q05769 24425867
    246662 4m10:B (2.01) BS02 ICD 1.14.99.1 GO:0001516 ... Q05769 24425867
    246663 4m10:C (2.01) BS01 HEM 1.14.99.1 GO:0001516 ... Q05769 24425867
    246664 4m10:C (2.01) BS02 ICD 1.14.99.1 GO:0001516 ... Q05769 24425867
    246665 4m10:D (2.01) BS01 HEM 1.14.99.1 GO:0001516 ... Q05769 24425867
    246666 4m10:D (2.01) BS02 ICD 1.14.99.1 GO:0001516 ... Q05769 24425867
    246667 4m11:A (2.45) BS01 HEM 1.14.99.1 GO:0001516 ... Q05769 24425867
    246668 4m11:A (2.45) BS02 MXM 1.14.99.1 GO:0001516 ... Q05769 24425867 MOAD: ic50=150nM
    BindingDB: IC50=151nM
    246669 4m11:B (2.45) BS01 HEM 1.14.99.1 GO:0001516 ... Q05769 24425867
    246670 4m11:B (2.45) BS02 MXM 1.14.99.1 GO:0001516 ... Q05769 24425867 MOAD: ic50=150nM
    BindingDB: IC50=151nM
    246671 4m11:C (2.45) BS01 HEM 1.14.99.1 GO:0001516 ... Q05769 24425867
    246672 4m11:C (2.45) BS02 MXM 1.14.99.1 GO:0001516 ... Q05769 24425867 MOAD: ic50=150nM
    BindingDB: IC50=151nM
    246673 4m11:D (2.45) BS01 HEM 1.14.99.1 GO:0001516 ... Q05769 24425867
    246674 4m11:D (2.45) BS02 MXM 1.14.99.1 GO:0001516 ... Q05769 24425867 MOAD: ic50=150nM
    BindingDB: IC50=151nM
    246675 4m12:A (2.15) BS01 1YZ 2.7.10.2 GO:0004672 ... Q08881 24593284 MOAD: Kd=0.9uM
    246676 4m13:A (1.85) BS01 1E0 2.7.10.2 GO:0004672 ... Q08881 24593284 MOAD: Kd=0.2uM
    246677 4m14:A (1.55) BS01 QWS 2.7.10.2 GO:0004672 ... Q08881 24593284
    246678 4m14:A (1.55) BS02 QWS 2.7.10.2 GO:0004672 ... Q08881 24593284
    246679 4m15:A (1.52) BS01 QWS 2.7.10.2 GO:0004672 ... Q08881 24593284
    246680 4m15:A (1.52) BS02 ADP 2.7.10.2 GO:0004672 ... Q08881 24593284
    246681 4m17:A (2.096) BS01 CA ? N/A P35247 24224757
    246682 4m17:A (2.096) BS02 CA ? N/A P35247 24224757
    246683 4m17:A (2.096) BS03 CA ? N/A P35247 24224757
    246684 4m17:B (2.096) BS01 CA ? N/A P35247 24224757
    246685 4m17:B (2.096) BS02 CA ? N/A P35247 24224757
    246686 4m17:B (2.096) BS03 CA ? N/A P35247 24224757
    246687 4m17:C (2.096) BS01 CA ? N/A P35247 24224757
    246688 4m17:C (2.096) BS02 CA ? N/A P35247 24224757
    246689 4m17:C (2.096) BS03 CA ? N/A P35247 24224757
    246690 4m17:D (2.096) BS01 CA ? N/A P35247 24224757
    246691 4m17:D (2.096) BS02 CA ? N/A P35247 24224757
    246692 4m17:D (2.096) BS03 CA ? N/A P35247 24224757
    246693 4m17:E (2.096) BS01 CA ? N/A P35247 24224757
    246694 4m17:E (2.096) BS02 CA ? N/A P35247 24224757
    246695 4m17:E (2.096) BS03 CA ? N/A P35247 24224757
    246696 4m17:F (2.096) BS01 CA ? N/A P35247 24224757
    246697 4m17:F (2.096) BS02 CA ? N/A P35247 24224757
    246698 4m17:F (2.096) BS03 CA ? N/A P35247 24224757
    246699 4m17:G (2.096) BS01 CA ? N/A P35247 24224757
    246700 4m17:G (2.096) BS02 CA ? N/A P35247 24224757
    246701 4m17:G (2.096) BS03 CA ? N/A P35247 24224757
    246702 4m17:H (2.096) BS01 CA ? N/A P35247 24224757
    246703 4m17:H (2.096) BS02 CA ? N/A P35247 24224757
    246704 4m17:H (2.096) BS03 CA ? N/A P35247 24224757
    246705 4m17:I (2.096) BS01 CA ? N/A P35247 24224757
    246706 4m17:I (2.096) BS02 CA ? N/A P35247 24224757
    246707 4m17:I (2.096) BS03 CA ? N/A P35247 24224757
    246708 4m17:J (2.096) BS01 CA ? N/A P35247 24224757
    246709 4m17:J (2.096) BS02 CA ? N/A P35247 24224757
    246710 4m17:J (2.096) BS03 CA ? N/A P35247 24224757
    246711 4m17:K (2.096) BS01 CA ? N/A P35247 24224757
    246712 4m17:K (2.096) BS02 CA ? N/A P35247 24224757
    246713 4m17:K (2.096) BS03 CA ? N/A P35247 24224757
    246714 4m17:L (2.096) BS01 CA ? N/A P35247 24224757
    246715 4m17:L (2.096) BS02 CA ? N/A P35247 24224757
    246716 4m17:L (2.096) BS03 CA ? N/A P35247 24224757
    246717 4m18:A (3.203) BS01 MAN ? N/A P35247 24224757
    246718 4m18:A (3.203) BS02 CA ? N/A P35247 24224757
    246719 4m18:A (3.203) BS03 CA ? N/A P35247 24224757
    246720 4m18:A (3.203) BS04 CA ? N/A P35247 24224757
    246721 4m18:B (3.203) BS01 MAN ? N/A P35247 24224757
    246722 4m18:B (3.203) BS02 CA ? N/A P35247 24224757
    246723 4m18:B (3.203) BS03 CA ? N/A P35247 24224757
    246724 4m18:B (3.203) BS04 CA ? N/A P35247 24224757
    246725 4m18:C (3.203) BS01 MAN ? N/A P35247 24224757
    246726 4m18:C (3.203) BS02 MAN ? N/A P35247 24224757
    246727 4m18:C (3.203) BS03 CA ? N/A P35247 24224757
    246728 4m18:C (3.203) BS04 CA ? N/A P35247 24224757
    246729 4m18:C (3.203) BS05 CA ? N/A P35247 24224757
    246730 4m18:D (3.203) BS01 MAN ? N/A P35247 24224757
    246731 4m18:D (3.203) BS02 CA ? N/A P35247 24224757
    246732 4m18:D (3.203) BS03 CA ? N/A P35247 24224757
    246733 4m18:D (3.203) BS04 CA ? N/A P35247 24224757
    246734 4m18:E (3.203) BS01 MAN ? N/A P35247 24224757
    246735 4m18:E (3.203) BS02 MAN ? N/A P35247 24224757
    246736 4m18:E (3.203) BS03 CA ? N/A P35247 24224757
    246737 4m18:E (3.203) BS04 CA ? N/A P35247 24224757
    246738 4m18:E (3.203) BS05 CA ? N/A P35247 24224757
    246739 4m18:F (3.203) BS01 MAN ? N/A P35247 24224757
    246740 4m18:F (3.203) BS02 MAN ? N/A P35247 24224757
    246741 4m18:F (3.203) BS03 CA ? N/A P35247 24224757
    246742 4m18:F (3.203) BS04 CA ? N/A P35247 24224757
    246743 4m18:F (3.203) BS05 CA ? N/A P35247 24224757
    246744 4m18:G (3.203) BS01 MAN ? N/A P35247 24224757
    246745 4m18:G (3.203) BS02 CA ? N/A P35247 24224757
    246746 4m18:G (3.203) BS03 CA ? N/A P35247 24224757
    246747 4m18:G (3.203) BS04 CA ? N/A P35247 24224757
    246748 4m18:H (3.203) BS01 MAN ? N/A P35247 24224757
    246749 4m18:H (3.203) BS02 CA ? N/A P35247 24224757
    246750 4m18:H (3.203) BS03 CA ? N/A P35247 24224757
    246751 4m18:H (3.203) BS04 CA ? N/A P35247 24224757
    246752 4m18:I (3.203) BS01 MAN ? N/A P35247 24224757
    246753 4m18:I (3.203) BS02 CA ? N/A P35247 24224757
    246754 4m18:I (3.203) BS03 CA ? N/A P35247 24224757
    246755 4m18:I (3.203) BS04 CA ? N/A P35247 24224757
    246756 4m18:J (3.203) BS01 MAN ? N/A P35247 24224757
    246757 4m18:J (3.203) BS02 CA ? N/A P35247 24224757
    246758 4m18:J (3.203) BS03 CA ? N/A P35247 24224757
    246759 4m18:J (3.203) BS04 CA ? N/A P35247 24224757
    246760 4m18:K (3.203) BS01 MAN ? N/A P35247 24224757
    246761 4m18:K (3.203) BS02 CA ? N/A P35247 24224757
    246762 4m18:K (3.203) BS03 CA ? N/A P35247 24224757
    246763 4m18:K (3.203) BS04 CA ? N/A P35247 24224757
    246764 4m18:L (3.203) BS01 MAN ? N/A P35247 24224757
    246765 4m18:L (3.203) BS02 MAN ? N/A P35247 24224757
    246766 4m18:L (3.203) BS03 CA ? N/A P35247 24224757
    246767 4m18:L (3.203) BS04 CA ? N/A P35247 24224757
    246768 4m18:L (3.203) BS05 CA ? N/A P35247 24224757
    246769 4m19:A (2.0) BS01 LYS 4.3.3.7 GO:0005737 ... Q9PPB4 25369463
    246770 4m19:A (2.0) BS02 LYS 4.3.3.7 GO:0005737 ... Q9PPB4 25369463
    246771 4m19:B (2.0) BS01 LYS 4.3.3.7 GO:0005737 ... Q9PPB4 25369463
    246772 4m19:B (2.0) BS02 LYS 4.3.3.7 GO:0005737 ... Q9PPB4 25369463
    246773 4m19:C (2.0) BS01 LYS 4.3.3.7 GO:0005737 ... Q9PPB4 25369463
    246774 4m19:C (2.0) BS02 LYS 4.3.3.7 GO:0005737 ... Q9PPB4 25369463
    246775 4m19:D (2.0) BS01 LYS 4.3.3.7 GO:0005737 ... Q9PPB4 25369463
    246776 4m19:D (2.0) BS02 LYS 4.3.3.7 GO:0005737 ... Q9PPB4 25369463
    246777 4m1c:A (3.5007) BS01 peptide 3.4.24.56 GO:0001540 ... P14735 N/A
    246778 4m1c:A (3.5007) BS02 ZN 3.4.24.56 GO:0001540 ... P14735 N/A
    246779 4m1c:B (3.5007) BS01 peptide 3.4.24.56 GO:0001540 ... P14735 N/A
    246780 4m1c:B (3.5007) BS02 ZN 3.4.24.56 GO:0001540 ... P14735 N/A
    246781 4m1d:H (1.8) BS01 peptide N/A N/A N/A 23944979
    246782 4m1d:I (1.8) BS01 peptide N/A N/A N/A 23944979
    246783 4m1d:L (1.8) BS01 peptide ? N/A A2NUT2 23944979
    246784 4m1d:M (1.8) BS01 peptide ? N/A A2NUT2 23944979
    246785 4m1e:A (1.9) BS01 ADE 2.4.2.1 GO:0003824 ... D5SMY7 N/A
    246786 4m1e:A (1.9) BS02 6PC 2.4.2.1 GO:0003824 ... D5SMY7 N/A
    246787 4m1e:A (1.9) BS03 6PC 2.4.2.1 GO:0003824 ... D5SMY7 N/A
    246788 4m1e:B (1.9) BS01 ADE 2.4.2.1 GO:0003824 ... D5SMY7 N/A
    246789 4m1e:B (1.9) BS02 6PC 2.4.2.1 GO:0003824 ... D5SMY7 N/A
    246790 4m1e:B (1.9) BS03 6PC 2.4.2.1 GO:0003824 ... D5SMY7 N/A
    246791 4m1e:C (1.9) BS01 ADE 2.4.2.1 GO:0003824 ... D5SMY7 N/A
    246792 4m1e:C (1.9) BS02 6PC 2.4.2.1 GO:0003824 ... D5SMY7 N/A
    246793 4m1e:D (1.9) BS01 6PC 2.4.2.1 GO:0003824 ... D5SMY7 N/A
    246794 4m1e:D (1.9) BS02 ADE 2.4.2.1 GO:0003824 ... D5SMY7 N/A
    246795 4m1e:E (1.9) BS01 6PC 2.4.2.1 GO:0003824 ... D5SMY7 N/A
    246796 4m1e:E (1.9) BS02 ADE 2.4.2.1 GO:0003824 ... D5SMY7 N/A
    246797 4m1e:E (1.9) BS03 6PC 2.4.2.1 GO:0003824 ... D5SMY7 N/A
    246798 4m1e:F (1.9) BS01 6PC 2.4.2.1 GO:0003824 ... D5SMY7 N/A
    246799 4m1e:F (1.9) BS02 ADE 2.4.2.1 GO:0003824 ... D5SMY7 N/A
    246800 4m1e:F (1.9) BS03 6PC 2.4.2.1 GO:0003824 ... D5SMY7 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).