SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    248001 4me4:A (2.55) BS02 FE ? N/A C0QQ26 24176013
    248002 4me4:A (2.55) BS03 FE ? N/A C0QQ26 24176013
    248003 4me4:B (2.55) BS01 FE ? N/A C0QQ26 24176013
    248004 4me4:B (2.55) BS02 FE ? N/A C0QQ26 24176013
    248005 4me4:B (2.55) BS03 FE ? N/A C0QQ26 24176013
    248006 4me4:B (2.55) BS04 5GP ? N/A C0QQ26 24176013
    248007 4me5:A (1.8) BS01 CA 3.1.31.1 GO:0003676 ... P00644 N/A
    248008 4me5:A (1.8) BS02 THP 3.1.31.1 GO:0003676 ... P00644 N/A
    248009 4me6:A (2.1) BS01 MG 6.3.2.4 GO:0000166 ... Q5H614 24440607
    248010 4me6:A (2.1) BS02 ADP 6.3.2.4 GO:0000166 ... Q5H614 24440607
    248011 4mec:A (3.2) BS01 ZNH 1.14.14.18 GO:0004392 ... P06762 25496210
    248012 4mec:B (3.2) BS01 ZNH 1.14.14.18 GO:0004392 ... P06762 25496210
    248013 4mec:C (3.2) BS01 ZNH 1.14.14.18 GO:0004392 ... P06762 25496210
    248014 4mec:C (3.2) BS02 ZNH 1.14.14.18 GO:0004392 ... P06762 25496210
    248015 4mec:D (3.2) BS01 ZNH 1.14.14.18 GO:0004392 ... P06762 25496210
    248016 4mec:E (3.2) BS01 ZNH 1.14.14.18 GO:0004392 ... P06762 25496210
    248017 4mej:A (2.1) BS01 28Y N/A N/A N/A N/A
    248018 4mej:B (2.1) BS01 28Y N/A N/A N/A N/A
    248019 4mej:C (2.1) BS01 28Y N/A N/A N/A N/A
    248020 4men:A (1.81) BS01 25K ? N/A O60885 24090311
    248021 4meo:A (1.72) BS01 25V ? N/A O60885 24090311 BindingDB: IC50=42000nM
    248022 4mep:A (1.85) BS01 24Y ? N/A O60885 24090311 MOAD: ic50=4.7uM
    248023 4meq:A (1.77) BS01 25O ? N/A O60885 24090311
    248024 4mes:A (2.0) BS01 26G N/A GO:0005886 ... N/A N/A
    248025 4mes:B (2.0) BS01 26G N/A GO:0005886 ... N/A N/A
    248026 4met:A (2.095) BS01 CO 4.1.1.2 GO:0005737 ... O34714 24444454
    248027 4met:A (2.095) BS02 CO 4.1.1.2 GO:0005737 ... O34714 24444454
    248028 4met:B (2.095) BS01 CO 4.1.1.2 GO:0005737 ... O34714 24444454
    248029 4met:B (2.095) BS02 CO 4.1.1.2 GO:0005737 ... O34714 24444454
    248030 4met:C (2.095) BS01 CO 4.1.1.2 GO:0005737 ... O34714 24444454
    248031 4met:C (2.095) BS02 CO 4.1.1.2 GO:0005737 ... O34714 24444454
    248032 4met:D (2.095) BS01 CO 4.1.1.2 GO:0005737 ... O34714 24444454
    248033 4met:D (2.095) BS02 CO 4.1.1.2 GO:0005737 ... O34714 24444454
    248034 4mew:A (1.993) BS01 CA ? GO:0005509 ... Q9Y5P8 25007185
    248035 4mew:A (1.993) BS02 CA ? GO:0005509 ... Q9Y5P8 25007185
    248036 4mex:C (3.902) BS01 peptide 2.7.7.6 GO:0000345 ... P0A8V2 24843001
    248037 4mex:C (3.902) BS02 peptide 2.7.7.6 GO:0000345 ... P0A8V2 24843001
    248038 4mex:D (3.902) BS01 peptide 2.7.7.6 GO:0000287 ... P0A8T7 24843001
    248039 4mex:D (3.902) BS02 MG 2.7.7.6 GO:0000287 ... P0A8T7 24843001
    248040 4mex:D (3.902) BS03 ZN 2.7.7.6 GO:0000287 ... P0A8T7 24843001
    248041 4mex:D (3.902) BS04 ZN 2.7.7.6 GO:0000287 ... P0A8T7 24843001
    248042 4mex:I (3.902) BS01 peptide 2.7.7.6 GO:0000345 ... P0A8V2 24843001
    248043 4mex:I (3.902) BS02 MG 2.7.7.6 GO:0000345 ... P0A8V2 24843001
    248044 4mex:J (3.902) BS01 peptide 2.7.7.6 GO:0000287 ... P0A8T7 24843001
    248045 4mex:J (3.902) BS02 MG 2.7.7.6 GO:0000287 ... P0A8T7 24843001
    248046 4mex:J (3.902) BS03 ZN 2.7.7.6 GO:0000287 ... P0A8T7 24843001
    248047 4mex:J (3.902) BS04 ZN 2.7.7.6 GO:0000287 ... P0A8T7 24843001
    248048 4mey:D (3.948) BS01 MG 2.7.7.6 GO:0000287 ... P0A8T7 24843001
    248049 4mey:D (3.948) BS02 ZN 2.7.7.6 GO:0000287 ... P0A8T7 24843001
    248050 4mey:D (3.948) BS03 ZN 2.7.7.6 GO:0000287 ... P0A8T7 24843001
    248051 4mey:J (3.948) BS01 MG 2.7.7.6 GO:0000287 ... P0A8T7 24843001
    248052 4mey:J (3.948) BS02 ZN 2.7.7.6 GO:0000287 ... P0A8T7 24843001
    248053 4mey:J (3.948) BS03 ZN 2.7.7.6 GO:0000287 ... P0A8T7 24843001
    248054 4mf0:A (2.67) BS01 29Z 2.7.10.2 GO:0004672 ... Q08881 24138940 BindingDB: Ki=8.4nM, IC50=10000nM
    248055 4mf0:A (2.67) BS02 29Z 2.7.10.2 GO:0004672 ... Q08881 24138940 BindingDB: Ki=8.4nM, IC50=10000nM
    248056 4mf0:B (2.67) BS01 29Z 2.7.10.2 GO:0004672 ... Q08881 24138940 BindingDB: Ki=8.4nM, IC50=10000nM
    248057 4mf1:A (2.113) BS01 29Y 2.7.10.2 GO:0004672 ... Q08881 24138940 MOAD: Ki=0.7nM
    BindingDB: Ki=0.600000nM, IC50=91nM
    248058 4mf1:B (2.113) BS01 29Y 2.7.10.2 GO:0004672 ... Q08881 24138940 MOAD: Ki=0.7nM
    BindingDB: Ki=0.600000nM, IC50=91nM
    248059 4mf2:A (2.4) BS01 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 24694247
    248060 4mf2:A (2.4) BS02 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 24694247
    248061 4mf2:A (2.4) BS03 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 24694247
    248062 4mf3:A (3.0) BS01 SXI ? GO:0015276 ... P39086 24140446
    248063 4mf3:B (3.0) BS01 SXI ? GO:0015276 ... P39086 24140446
    248064 4mf5:A (1.11) BS01 GSH 1.8.4.- N/A B1FXZ2 N/A
    248065 4mf6:A (1.2) BS01 GSH 1.8.4.- N/A B1FXZ2 N/A
    248066 4mf6:A (1.2) BS02 GSH 1.8.4.- N/A B1FXZ2 N/A
    248067 4mf8:A (2.32) BS01 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 N/A
    248068 4mf8:A (2.32) BS02 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 N/A
    248069 4mf8:A (2.32) BS03 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 N/A
    248070 4mf9:A (1.95) BS01 HEM ? GO:0006826 ... O68880 24560694
    248071 4mf9:B (1.95) BS01 HEM ? GO:0006826 ... O68880 24560694
    248072 4mfa:A (2.27) BS01 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 N/A
    248073 4mfa:A (2.27) BS02 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 N/A
    248074 4mfa:A (2.27) BS03 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 N/A
    248075 4mfb:A (2.88) BS01 29T 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 24151856
    248076 4mfc:A (2.13) BS01 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 24694247
    248077 4mfc:A (2.13) BS02 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 24694247
    248078 4mfc:A (2.13) BS03 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 24694247
    248079 4mfc:A (2.13) BS04 0KX 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 24694247
    248080 4mfd:A (2.55) BS01 ZN 6.4.1.1 GO:0003824 ... Q2K340 24157795
    248081 4mfd:A (2.55) BS02 OXL 6.4.1.1 GO:0003824 ... Q2K340 24157795
    248082 4mfd:A (2.55) BS03 MG 6.4.1.1 GO:0003824 ... Q2K340 24157795
    248083 4mfd:B (2.55) BS01 ZN 6.4.1.1 GO:0003824 ... Q2K340 24157795
    248084 4mfd:B (2.55) BS02 OXL 6.4.1.1 GO:0003824 ... Q2K340 24157795
    248085 4mfd:B (2.55) BS03 MG 6.4.1.1 GO:0003824 ... Q2K340 24157795
    248086 4mfd:C (2.55) BS01 ZN 6.4.1.1 GO:0003824 ... Q2K340 24157795
    248087 4mfd:C (2.55) BS02 OXL 6.4.1.1 GO:0003824 ... Q2K340 24157795
    248088 4mfd:C (2.55) BS03 MG 6.4.1.1 GO:0003824 ... Q2K340 24157795
    248089 4mfd:D (2.55) BS01 ZN 6.4.1.1 GO:0003824 ... Q2K340 24157795
    248090 4mfd:D (2.55) BS02 OXL 6.4.1.1 GO:0003824 ... Q2K340 24157795
    248091 4mfd:D (2.55) BS03 MG 6.4.1.1 GO:0003824 ... Q2K340 24157795
    248092 4mfe:A (2.61) BS01 ZN 6.4.1.1 GO:0003824 ... Q2K340 24157795
    248093 4mfe:A (2.61) BS02 3PY 6.4.1.1 GO:0003824 ... Q2K340 24157795
    248094 4mfe:A (2.61) BS03 BTN 6.4.1.1 GO:0003824 ... Q2K340 24157795
    248095 4mfe:A (2.61) BS04 MG 6.4.1.1 GO:0003824 ... Q2K340 24157795
    248096 4mfe:B (2.61) BS01 ZN 6.4.1.1 GO:0003824 ... Q2K340 24157795
    248097 4mfe:B (2.61) BS02 3PY 6.4.1.1 GO:0003824 ... Q2K340 24157795
    248098 4mfe:B (2.61) BS03 BTN 6.4.1.1 GO:0003824 ... Q2K340 24157795
    248099 4mfe:B (2.61) BS04 MG 6.4.1.1 GO:0003824 ... Q2K340 24157795
    248100 4mfe:C (2.61) BS01 ZN 6.4.1.1 GO:0003824 ... Q2K340 24157795
    248101 4mfe:C (2.61) BS02 3PY 6.4.1.1 GO:0003824 ... Q2K340 24157795
    248102 4mfe:C (2.61) BS03 BTN 6.4.1.1 GO:0003824 ... Q2K340 24157795
    248103 4mfe:C (2.61) BS04 MG 6.4.1.1 GO:0003824 ... Q2K340 24157795
    248104 4mfe:D (2.61) BS01 ZN 6.4.1.1 GO:0003824 ... Q2K340 24157795
    248105 4mfe:D (2.61) BS02 3PY 6.4.1.1 GO:0003824 ... Q2K340 24157795
    248106 4mfe:D (2.61) BS03 BTN 6.4.1.1 GO:0003824 ... Q2K340 24157795
    248107 4mfe:D (2.61) BS04 MG 6.4.1.1 GO:0003824 ... Q2K340 24157795
    248108 4mff:A (2.55) BS01 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 24694247
    248109 4mff:A (2.55) BS02 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 24694247
    248110 4mff:A (2.55) BS03 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 24694247
    248111 4mff:A (2.55) BS04 MG 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 24694247
    248112 4mff:A (2.55) BS05 1FZ 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 24694247
    248113 4mfh:A (1.54) BS01 CU ? GO:0005507 ... P00282 24390543
    248114 4mfh:B (1.54) BS01 CU ? GO:0005507 ... P00282 24390543
    248115 4mfh:C (1.54) BS01 CU ? GO:0005507 ... P00282 24390543
    248116 4mfk:A (1.9) BS01 MFK 2.3.1.- N/A Q70AY4 25095906
    248117 4mfl:A (1.9) BS01 peptide 2.3.1.- N/A Q70AY4 25095906
    248118 4mfl:A (1.9) BS02 MFK 2.3.1.- N/A Q70AY4 25095906
    248119 4mfl:A (1.9) BS03 GCS 2.3.1.- N/A Q70AY4 25095906
    248120 4mfp:A (2.15) BS01 peptide 2.3.1.- N/A Q70AY4 25095906
    248121 4mfp:A (2.15) BS02 COA 2.3.1.- N/A Q70AY4 25095906
    248122 4mfp:A (2.15) BS03 GCS 2.3.1.- N/A Q70AY4 25095906
    248123 4mfq:A (2.0) BS01 peptide 2.3.1.- N/A Q70AY4 25095906
    248124 4mfq:A (2.0) BS02 COA 2.3.1.- N/A Q70AY4 25095906
    248125 4mfq:A (2.0) BS03 GCS 2.3.1.- N/A Q70AY4 25095906
    248126 4mfz:A (2.1) BS01 MFK 2.3.1.- N/A Q7WZ83 25095906
    248127 4mg2:A (2.3) BS01 dna 1.14.11.33 GO:0006281 ... Q6NS38 N/A
    248128 4mg2:A (2.3) BS02 MG 1.14.11.33 GO:0006281 ... Q6NS38 N/A
    248129 4mg3:A (1.798) BS01 ZN 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0006508 ... Q9QF31 24026848
    248130 4mg3:B (1.798) BS01 ZN 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0006508 ... Q9QF31 24026848
    248131 4mg5:A (2.05) BS01 peptide ? N/A P03372 25260197
    248132 4mg5:A (2.05) BS02 27E ? N/A P03372 25260197
    248133 4mg5:B (2.05) BS01 peptide ? N/A P03372 25260197
    248134 4mg5:B (2.05) BS02 27E ? N/A P03372 25260197
    248135 4mg6:A (2.1) BS01 peptide ? N/A P03372 25260197
    248136 4mg6:A (2.1) BS02 27G ? N/A P03372 25260197
    248137 4mg6:B (2.1) BS01 peptide ? N/A P03372 25260197
    248138 4mg6:B (2.1) BS02 27G ? N/A P03372 25260197
    248139 4mg7:A (2.15) BS01 peptide ? N/A P03372 25260197
    248140 4mg7:A (2.15) BS02 27H ? N/A P03372 25260197 BindingDB: IC50=33nM
    248141 4mg7:B (2.15) BS01 peptide ? N/A P03372 25260197
    248142 4mg7:B (2.15) BS02 27H ? N/A P03372 25260197 BindingDB: IC50=33nM
    248143 4mg8:A (1.85) BS01 peptide ? N/A P03372 25260197
    248144 4mg8:A (1.85) BS02 27J ? N/A P03372 25260197
    248145 4mg8:B (1.85) BS01 peptide ? N/A P03372 25260197
    248146 4mg8:B (1.85) BS02 27J ? N/A P03372 25260197
    248147 4mg9:A (2.0) BS01 peptide ? N/A P03372 25260197
    248148 4mg9:A (2.0) BS02 27K ? N/A P03372 25260197 BindingDB: IC50=1420nM
    248149 4mg9:B (2.0) BS01 peptide ? N/A P03372 25260197
    248150 4mg9:B (2.0) BS02 27K ? N/A P03372 25260197 BindingDB: IC50=1420nM
    248151 4mga:A (1.8) BS01 peptide ? N/A P03372 25260197
    248152 4mga:A (1.8) BS02 27L ? N/A P03372 25260197
    248153 4mga:B (1.8) BS01 peptide ? N/A P03372 25260197
    248154 4mga:B (1.8) BS02 27L ? N/A P03372 25260197
    248155 4mgb:A (1.85) BS01 peptide ? N/A P03372 25260197
    248156 4mgb:A (1.85) BS02 XDH ? N/A P03372 25260197
    248157 4mgb:B (1.85) BS01 peptide ? N/A P03372 25260197
    248158 4mgb:B (1.85) BS02 XDH ? N/A P03372 25260197
    248159 4mgc:A (2.15) BS01 peptide ? N/A P03372 25260197
    248160 4mgc:A (2.15) BS02 27M ? N/A P03372 25260197
    248161 4mgc:B (2.15) BS01 peptide ? N/A P03372 25260197
    248162 4mgc:B (2.15) BS02 27M ? N/A P03372 25260197
    248163 4mgd:A (1.9) BS01 peptide ? N/A P03372 25260197
    248164 4mgd:A (1.9) BS02 27N ? N/A P03372 25260197 BindingDB: EC50=31nM, IC50=43nM
    248165 4mgd:B (1.9) BS01 peptide ? N/A P03372 25260197
    248166 4mgd:B (1.9) BS02 27N ? N/A P03372 25260197 BindingDB: EC50=31nM, IC50=43nM
    248167 4mgg:A (2.2) BS01 MG 4.2.1.171 GO:0000287 ... A0NXQ8 N/A
    248168 4mgg:B (2.2) BS01 MG 4.2.1.171 GO:0000287 ... A0NXQ8 N/A
    248169 4mgg:C (2.2) BS01 MG 4.2.1.171 GO:0000287 ... A0NXQ8 N/A
    248170 4mgg:D (2.2) BS01 MG 4.2.1.171 GO:0000287 ... A0NXQ8 N/A
    248171 4mgg:E (2.2) BS01 MG 4.2.1.171 GO:0000287 ... A0NXQ8 N/A
    248172 4mgg:F (2.2) BS01 MG 4.2.1.171 GO:0000287 ... A0NXQ8 N/A
    248173 4mgg:G (2.2) BS01 MG 4.2.1.171 GO:0000287 ... A0NXQ8 N/A
    248174 4mgg:H (2.2) BS01 MG 4.2.1.171 GO:0000287 ... A0NXQ8 N/A
    248175 4mgh:A (2.65) BS01 ADP 6.3.5.3 GO:0004642 ... P74881 24223728
    248176 4mgh:A (2.65) BS02 MG 6.3.5.3 GO:0004642 ... P74881 24223728
    248177 4mgh:A (2.65) BS03 XE 6.3.5.3 GO:0004642 ... P74881 24223728
    248178 4mgh:A (2.65) BS04 XE 6.3.5.3 GO:0004642 ... P74881 24223728
    248179 4mgh:A (2.65) BS05 XE 6.3.5.3 GO:0004642 ... P74881 24223728
    248180 4mgi:E (2.8) BS01 CMP ? GO:0005085 ... Q9EQZ6 N/A
    248181 4mgi:E (2.8) BS02 CMP ? GO:0005085 ... Q9EQZ6 N/A
    248182 4mgj:A (2.41) BS01 HEM 1.14.14.1 GO:0004497 ... P00178 25029089
    248183 4mgj:A (2.41) BS02 CPZ 1.14.14.1 GO:0004497 ... P00178 25029089
    248184 4mgk:E (2.7) BS01 CMP ? GO:0005085 ... Q9EQZ6 N/A
    248185 4mgq:A (1.68) BS01 CA 3.2.1.8 GO:0016798 ... D8DVU6 25136124
    248186 4mgt:A (2.6) BS01 dna 1.14.11.33 GO:0006281 ... Q6NS38 N/A
    248187 4mgt:A (2.6) BS02 dna 1.14.11.33 GO:0006281 ... Q6NS38 N/A
    248188 4mgt:A (2.6) BS03 MG 1.14.11.33 GO:0006281 ... Q6NS38 N/A
    248189 4mgu:A (3.5) BS01 dna ? GO:0005198 ... F2Y986 24027306
    248190 4mgv:A (1.72) BS01 D5I 5.2.1.8 GO:0003755 ... A5K8X6 24900611
    248191 4mgx:A (3.16) BS01 peptide ? GO:0030036 ... Q14315 24469451
    248192 4mgy:E (2.6) BS01 H07 ? GO:0005085 ... Q9EQZ6 N/A
    248193 4mgz:E (3.0) BS01 HR6 ? GO:0005085 ... Q9EQZ6 N/A
    248194 4mgz:E (3.0) BS02 HR6 ? GO:0005085 ... Q9EQZ6 N/A
    248195 4mh0:E (2.4) BS01 HR4 ? GO:0005085 ... Q9EQZ6 N/A
    248196 4mh0:E (2.4) BS02 HR4 ? GO:0005085 ... Q9EQZ6 N/A
    248197 4mh1:B (2.7) BS01 PQQ N/A N/A N/A 24557074
    248198 4mh5:A (1.65) BS01 GLU ? GO:0015276 ... P42264 21907808
    248199 4mh7:A (2.51) BS01 MG 2.7.10.1 GO:0004672 ... Q12866 24219778
    248200 4mh7:A (2.51) BS02 MH7 2.7.10.1 GO:0004672 ... Q12866 24219778 BindingDB: IC50=5900nM

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).