SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    248601 4mm9:A (2.9) BS01 NA ? GO:0005886 ... O67854 24121440
    248602 4mm9:A (2.9) BS02 NA ? GO:0005886 ... O67854 24121440
    248603 4mm9:A (2.9) BS03 FVX ? GO:0005886 ... O67854 24121440
    248604 4mma:A (3.3) BS01 NA ? GO:0005886 ... O67854 24121440
    248605 4mma:A (3.3) BS02 NA ? GO:0005886 ... O67854 24121440
    248606 4mma:A (3.3) BS03 CXX ? GO:0005886 ... O67854 24121440
    248607 4mmb:A (2.25) BS01 NA ? GO:0005886 ... O67854 24121440
    248608 4mmb:A (2.25) BS02 NA ? GO:0005886 ... O67854 24121440
    248609 4mmb:A (2.25) BS03 SRE ? GO:0005886 ... O67854 24121440
    248610 4mmc:A (2.3) BS01 NA ? GO:0005886 ... O67854 24121440
    248611 4mmc:A (2.3) BS02 NA ? GO:0005886 ... O67854 24121440
    248612 4mmc:A (2.3) BS03 29J ? GO:0005886 ... O67854 24121440
    248613 4mmc:A (2.3) BS04 29J ? GO:0005886 ... O67854 24121440
    248614 4mmd:A (2.3) BS01 NA ? GO:0005886 ... O67854 24121440
    248615 4mmd:A (2.3) BS02 NA ? GO:0005886 ... O67854 24121440
    248616 4mmd:A (2.3) BS03 29E ? GO:0005886 ... O67854 24121440
    248617 4mmd:B (2.3) BS01 NA ? GO:0005886 ... O67854 24121440
    248618 4mmd:B (2.3) BS02 NA ? GO:0005886 ... O67854 24121440
    248619 4mmd:B (2.3) BS03 29E ? GO:0005886 ... O67854 24121440
    248620 4mme:A (2.5) BS01 NA ? GO:0005886 ... O67854 24121440
    248621 4mme:A (2.5) BS02 NA ? GO:0005886 ... O67854 24121440
    248622 4mme:A (2.5) BS03 29Q ? GO:0005886 ... O67854 24121440 MOAD: Kd=318nM
    248623 4mme:B (2.5) BS01 NA ? GO:0005886 ... O67854 24121440
    248624 4mme:B (2.5) BS02 NA ? GO:0005886 ... O67854 24121440
    248625 4mme:B (2.5) BS03 29Q ? GO:0005886 ... O67854 24121440 MOAD: Kd=318nM
    248626 4mmf:A (2.7) BS01 NA ? GO:0005886 ... O67854 24121440
    248627 4mmf:A (2.7) BS02 NA ? GO:0005886 ... O67854 24121440
    248628 4mmf:A (2.7) BS03 29Q ? GO:0005886 ... O67854 24121440
    248629 4mmf:B (2.7) BS01 NA ? GO:0005886 ... O67854 24121440
    248630 4mmf:B (2.7) BS02 NA ? GO:0005886 ... O67854 24121440
    248631 4mmf:B (2.7) BS03 29Q ? GO:0005886 ... O67854 24121440
    248632 4mmh:A (2.2) BS01 CA 4.2.2.8 GO:0015021 ... Q59289 24437462
    248633 4mmh:A (2.2) BS02 CA 4.2.2.8 GO:0015021 ... Q59289 24437462
    248634 4mmi:A (2.4) BS01 CA 4.2.2.8 GO:0015021 ... Q59289 24437462
    248635 4mmi:A (2.4) BS02 CA 4.2.2.8 GO:0015021 ... Q59289 24437462
    248636 4mmk:A (2.156) BS01 ZN ? GO:0003723 ... Q9HUM0 24954598
    248637 4mmk:E (2.156) BS01 ZN ? GO:0003723 ... Q9HUM0 24954598
    248638 4mmk:K (2.156) BS01 ZN ? GO:0003723 ... Q9HUM0 24954598
    248639 4mml:A (1.801) BS01 U ? GO:0003723 ... Q9HUM0 24954598
    248640 4mmm:A (1.47) BS01 BP7 1.11.1.24 GO:0008379 ... P30044 25025339 MOAD: Kd=150uM
    248641 4mmm:C (1.47) BS01 BP7 1.11.1.24 GO:0008379 ... P30044 25025339 MOAD: Kd=150uM
    248642 4mmm:E (1.47) BS01 BP7 1.11.1.24 GO:0008379 ... P30044 25025339
    248643 4mmm:G (1.47) BS01 BP7 1.11.1.24 GO:0008379 ... P30044 25025339
    248644 4mmo:A (2.3363) BS01 ZN ? GO:0006508 ... Q97V97 N/A
    248645 4mmp:A (1.57) BS01 SLB N/A GO:0030288 ... N/A 25004958 MOAD: Kd=19.7nM
    248646 4mmw:A (1.647) BS01 MG ? GO:0000287 ... Q7CSI0 N/A
    248647 4mmw:A (1.647) BS02 MG ? GO:0000287 ... Q7CSI0 N/A
    248648 4mmw:A (1.647) BS03 XYH ? GO:0000287 ... Q7CSI0 N/A
    248649 4mmw:A (1.647) BS04 LLH ? GO:0000287 ... Q7CSI0 N/A
    248650 4mmw:B (1.647) BS01 MG ? GO:0000287 ... Q7CSI0 N/A
    248651 4mmw:B (1.647) BS02 MG ? GO:0000287 ... Q7CSI0 N/A
    248652 4mmw:B (1.647) BS03 XYH ? GO:0000287 ... Q7CSI0 N/A
    248653 4mmw:B (1.647) BS04 LLH ? GO:0000287 ... Q7CSI0 N/A
    248654 4mmx:A (3.32) BS01 MAN ? GO:0001525 ... P06756 24658351
    248655 4mmx:A (3.32) BS02 MN ? GO:0001525 ... P06756 24658351
    248656 4mmx:A (3.32) BS03 MN ? GO:0001525 ... P06756 24658351
    248657 4mmx:A (3.32) BS04 MN ? GO:0001525 ... P06756 24658351
    248658 4mmx:A (3.32) BS05 MN ? GO:0001525 ... P06756 24658351
    248659 4mmx:A (3.32) BS06 MN ? GO:0001525 ... P06756 24658351
    248660 4mmx:B (3.32) BS01 MN ? GO:0001525 ... P05106 24658351
    248661 4mmx:B (3.32) BS02 MN ? GO:0001525 ... P05106 24658351
    248662 4mmx:B (3.32) BS03 MN ? GO:0001525 ... P05106 24658351
    248663 4mmy:A (3.183) BS01 peptide ? GO:0001525 ... P06756 24658351
    248664 4mmy:A (3.183) BS02 BMA ? GO:0001525 ... P06756 24658351
    248665 4mmy:A (3.183) BS03 MN ? GO:0001525 ... P06756 24658351
    248666 4mmy:A (3.183) BS04 MN ? GO:0001525 ... P06756 24658351
    248667 4mmy:A (3.183) BS05 MN ? GO:0001525 ... P06756 24658351
    248668 4mmy:A (3.183) BS06 MN ? GO:0001525 ... P06756 24658351
    248669 4mmy:A (3.183) BS07 MN ? GO:0001525 ... P06756 24658351
    248670 4mmy:B (3.183) BS01 peptide ? GO:0001525 ... P05106 24658351
    248671 4mmy:B (3.183) BS02 MN ? GO:0001525 ... P05106 24658351
    248672 4mmy:B (3.183) BS03 MN ? GO:0001525 ... P05106 24658351
    248673 4mmy:B (3.183) BS04 MN ? GO:0001525 ... P05106 24658351
    248674 4mmz:A (3.1) BS01 MN ? GO:0001525 ... P06756 24658351
    248675 4mmz:A (3.1) BS02 MN ? GO:0001525 ... P06756 24658351
    248676 4mmz:A (3.1) BS03 MN ? GO:0001525 ... P06756 24658351
    248677 4mmz:A (3.1) BS04 MN ? GO:0001525 ... P06756 24658351
    248678 4mmz:A (3.1) BS05 MN ? GO:0001525 ... P06756 24658351
    248679 4mmz:B (3.1) BS01 MN ? GO:0001525 ... P05106 24658351
    248680 4mmz:B (3.1) BS02 MN ? GO:0001525 ... P05106 24658351
    248681 4mmz:B (3.1) BS03 MN ? GO:0001525 ... P05106 24658351
    248682 4mn0:A (1.9) BS01 CA ? GO:0005509 ... H8ZZK1 23891746
    248683 4mn0:A (1.9) BS02 CA ? GO:0005509 ... H8ZZK1 23891746
    248684 4mn0:A (1.9) BS03 CA ? GO:0005509 ... H8ZZK1 23891746
    248685 4mn3:A (1.542) BS01 peptide ? GO:0035102 ... O95931 24625057
    248686 4mn3:A (1.542) BS02 MG ? GO:0035102 ... O95931 24625057
    248687 4mn5:A (2.0) BS01 ZN 2.7.13.3 N/A Q9RDT3 N/A
    248688 4mn5:B (2.0) BS01 ZN 2.7.13.3 N/A Q9RDT3 N/A
    248689 4mn6:A (2.1) BS01 ZN 2.7.13.3 N/A Q9RDT3 N/A
    248690 4mn6:B (2.1) BS01 ZN 2.7.13.3 N/A Q9RDT3 N/A
    248691 4mn7:B (2.0) BS01 SME ? N/A Q9HJW5 25043974
    248692 4mn8:A (3.062) BS01 peptide 2.7.11.1 N/A Q9FL28 24114786
    248693 4mn8:B (3.062) BS01 peptide 2.7.10.1
    2.7.11.1
    N/A Q94F62 24114786
    248694 4mn9:A (1.15) BS01 FE 1.16.3.1 GO:0004322 ... P07798 25849404
    248695 4mn9:A (1.15) BS02 FE 1.16.3.1 GO:0004322 ... P07798 25849404
    248696 4mn9:A (1.15) BS03 FE 1.16.3.1 GO:0004322 ... P07798 25849404
    248697 4mn9:A (1.15) BS04 FE 1.16.3.1 GO:0004322 ... P07798 25849404
    248698 4mn9:A (1.15) BS05 FE 1.16.3.1 GO:0004322 ... P07798 25849404
    248699 4mnc:A (1.05) BS01 173 ? GO:0055085 ... Q122C7 25540822
    248700 4mnc:A (1.05) BS02 173 ? GO:0055085 ... Q122C7 25540822
    248701 4mnd:A (2.66) BS01 MG 2.7.7.74
    2.7.8.34
    GO:0008654 ... O29976 24942835
    248702 4mne:A (2.8483) BS01 ACP 2.7.12.2 GO:0004672 ... Q02750 25155755
    248703 4mne:A (2.8483) BS02 MG 2.7.12.2 GO:0004672 ... Q02750 25155755
    248704 4mne:A (2.8483) BS03 573 2.7.12.2 GO:0004672 ... Q02750 25155755 BindingDB: EC50=7.2nM, IC50=35nM
    248705 4mne:D (2.8483) BS01 ACP 2.7.12.2 GO:0004672 ... Q02750 25155755
    248706 4mne:D (2.8483) BS02 MG 2.7.12.2 GO:0004672 ... Q02750 25155755
    248707 4mne:D (2.8483) BS03 573 2.7.12.2 GO:0004672 ... Q02750 25155755 BindingDB: EC50=7.2nM, IC50=35nM
    248708 4mne:E (2.8483) BS01 ACP 2.7.12.2 GO:0004672 ... Q02750 25155755
    248709 4mne:E (2.8483) BS02 MG 2.7.12.2 GO:0004672 ... Q02750 25155755
    248710 4mne:E (2.8483) BS03 573 2.7.12.2 GO:0004672 ... Q02750 25155755 BindingDB: EC50=7.2nM, IC50=35nM
    248711 4mne:H (2.8483) BS01 ACP 2.7.12.2 GO:0004672 ... Q02750 25155755
    248712 4mne:H (2.8483) BS02 MG 2.7.12.2 GO:0004672 ... Q02750 25155755
    248713 4mne:H (2.8483) BS03 573 2.7.12.2 GO:0004672 ... Q02750 25155755 BindingDB: EC50=7.2nM, IC50=35nM
    248714 4mne:H (2.8483) BS04 573 2.7.12.2 GO:0004672 ... Q02750 25155755 BindingDB: EC50=7.2nM, IC50=35nM
    248715 4mnf:A (2.802) BS01 29L 2.7.11.1 GO:0004672 ... P15056 25155755 BindingDB: IC50=0.170000nM, Ki=0.130000nM
    248716 4mnf:B (2.802) BS01 29L 2.7.11.1 GO:0004672 ... P15056 25155755 BindingDB: IC50=0.170000nM, Ki=0.130000nM
    248717 4mng:A (3.0058) BS01 CIS ? N/A P11609
    P15813
    24239091
    248718 4mng:C (3.0058) BS01 CIS ? N/A P11609
    P15813
    24239091
    248719 4mng:E (3.0058) BS01 CIS ? N/A Q6PJ56 24239091
    248720 4mng:F (3.0058) BS01 CIS ? N/A Q6PJ56 24239091
    248721 4mni:A (1.9) BS01 173 ? GO:0055085 ... Q122C7 25540822
    248722 4mnp:A (2.5) BS01 SLB ? GO:0030288 ... Q8RDN9 25004958 MOAD: Kd=45.5nM
    248723 4mnq:A (2.742) BS01 peptide ? N/A P04439 24196962
    248724 4mnq:D (2.742) BS01 peptide ? N/A H2RG00
    K7N5N2
    24196962
    248725 4mnq:E (2.742) BS01 peptide ? N/A P01850 24196962
    248726 4mns:A (1.2) BS01 2AX ? GO:0004864 ... P15494 25846209
    248727 4mnt:A (1.584) BS01 CU 3.1.2.-
    3.5.1.-
    3.5.1.124
    GO:0000785 ... Q99497 24567322
    248728 4mnv:A (1.8) BS01 peptide 3.4.21.73 GO:0004252 ... P00749 24453110
    248729 4mnw:A (1.49) BS01 peptide 3.4.21.73 GO:0004252 ... P00749 24453110
    248730 4mnx:A (1.85) BS01 peptide 3.4.21.73 GO:0004252 ... P00749 24453110
    248731 4mny:A (1.7) BS01 peptide 3.4.21.73 GO:0004252 ... P00749 24453110
    248732 4mny:A (1.7) BS02 29O 3.4.21.73 GO:0004252 ... P00749 24453110
    248733 4mny:B (1.7) BS01 peptide 3.4.21.73 GO:0004252 ... P00749 24453110
    248734 4mny:B (1.7) BS02 29O 3.4.21.73 GO:0004252 ... P00749 24453110
    248735 4mo1:A (2.099) BS01 ZN ? GO:0003677 ... P03047 N/A
    248736 4mo1:B (2.099) BS01 ZN ? GO:0003677 ... P03047 N/A
    248737 4mo2:A (2.0) BS01 FAD 5.4.99.9 GO:0005829 ... Q0P8H5 24302429
    248738 4mo2:B (2.0) BS01 FDA 5.4.99.9 GO:0005829 ... Q0P8H5 24302429
    248739 4mo4:A (1.67) BS01 ACP 2.7.1.170 GO:0005524 ... Q9I5Q5 24362022 MOAD: Kd=0.06mM
    248740 4mo4:B (1.67) BS01 ACP 2.7.1.170 GO:0005524 ... Q9I5Q5 24362022 MOAD: Kd=0.06mM
    248741 4mo4:C (1.67) BS01 ACP 2.7.1.170 GO:0005524 ... Q9I5Q5 24362022 MOAD: Kd=0.06mM
    248742 4mo4:D (1.67) BS01 ACP 2.7.1.170 GO:0005524 ... Q9I5Q5 24362022 MOAD: Kd=0.06mM
    248743 4mo5:A (1.75) BS01 AH0 2.7.1.170 GO:0005524 ... Q9I5Q5 24362022
    248744 4mo5:A (1.75) BS02 ACP 2.7.1.170 GO:0005524 ... Q9I5Q5 24362022
    248745 4mo5:B (1.75) BS01 AH0 2.7.1.170 GO:0005524 ... Q9I5Q5 24362022
    248746 4mo5:B (1.75) BS02 ACP 2.7.1.170 GO:0005524 ... Q9I5Q5 24362022
    248747 4mo5:C (1.75) BS01 AH0 2.7.1.170 GO:0005524 ... Q9I5Q5 24362022
    248748 4mo5:C (1.75) BS02 ACP 2.7.1.170 GO:0005524 ... Q9I5Q5 24362022
    248749 4mo5:D (1.75) BS01 AH0 2.7.1.170 GO:0005524 ... Q9I5Q5 24362022
    248750 4mo5:D (1.75) BS02 ACP 2.7.1.170 GO:0005524 ... Q9I5Q5 24362022
    248751 4mo8:A (1.85) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 24128000
    248752 4mo8:A (1.85) BS02 2VQ 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 24128000 MOAD: Ki=10.1nM
    BindingDB: Ki=10nM
    248753 4mob:A (2.401) BS01 COA 3.1.2.1 GO:0016790 ... Q8WYK0 25002576
    248754 4mob:A (2.401) BS02 ADP 3.1.2.1 GO:0016790 ... Q8WYK0 25002576 MOAD: ic50=0.0729mM
    248755 4moc:A (2.5) BS01 COA 3.1.2.1 GO:0016790 ... Q8WYK0 25002576
    248756 4moe:A (2.0) BS01 FDA 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248757 4moe:A (2.0) BS02 G3F 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248758 4moe:B (2.0) BS01 FDA 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248759 4moe:B (2.0) BS02 G3F 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248760 4moe:C (2.0) BS01 FDA 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248761 4moe:C (2.0) BS02 G3F 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248762 4moe:D (2.0) BS01 FDA 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248763 4moe:D (2.0) BS02 G3F 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248764 4mof:A (1.85) BS01 FDA 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248765 4mof:A (1.85) BS02 G2F 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248766 4mog:A (2.0) BS01 FDA 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248767 4mog:A (2.0) BS02 G3F 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248768 4moh:A (2.1) BS01 FDA 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248769 4moh:A (2.1) BS02 SHG 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248770 4moi:A (1.9) BS01 FDA 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248771 4moi:A (1.9) BS02 G3F 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248772 4moi:B (1.9) BS01 FDA 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248773 4moi:B (1.9) BS02 G3F 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248774 4moj:A (2.0) BS01 FDA 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248775 4moj:A (2.0) BS02 G2F 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248776 4moj:B (2.0) BS01 FDA 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248777 4moj:B (2.0) BS02 G2F 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248778 4moj:C (2.0) BS01 FDA 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248779 4moj:C (2.0) BS02 G2F 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248780 4moj:D (2.0) BS01 FDA 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248781 4moj:D (2.0) BS02 G2F 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248782 4mok:A (1.9) BS01 FAD 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248783 4mok:B (1.9) BS01 FAD 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248784 4mok:C (1.9) BS01 FAD 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248785 4mok:D (1.9) BS01 FAD 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248786 4mol:A (2.0) BS01 FAD 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248787 4mol:A (2.0) BS02 2FG 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248788 4mol:B (2.0) BS01 FAD 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248789 4mol:B (2.0) BS02 2FG 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248790 4mol:C (2.0) BS01 FAD 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248791 4mol:C (2.0) BS02 2FG 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248792 4mol:D (2.0) BS01 FAD 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248793 4mol:D (2.0) BS02 2FG 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248794 4mom:A (1.9) BS01 FDA 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248795 4mom:A (1.9) BS02 2H5 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248796 4mom:B (1.9) BS01 FDA 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248797 4mom:B (1.9) BS02 2H5 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248798 4mom:C (1.9) BS01 FDA 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248799 4mom:C (1.9) BS02 2H5 1.1.3.10 GO:0016614 ... Q7ZA32 24466218
    248800 4mom:D (1.9) BS01 FDA 1.1.3.10 GO:0016614 ... Q7ZA32 24466218

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).