SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    250401 4n60:A (2.9032) BS01 SIA ? GO:0019031 ... R4NN21 24311689
    250402 4n60:C (2.9032) BS01 SIA ? GO:0019031 ... R4NN21 24311689
    250403 4n61:A (2.6023) BS01 SIA ? GO:0019031 ... R4NN21 24311689
    250404 4n61:C (2.6023) BS01 SIA ? GO:0019031 ... R4NN21 24311689
    250405 4n62:A (2.5026) BS01 NGS ? GO:0019031 ... R4NN21 24311689
    250406 4n62:A (2.5026) BS02 SIA ? GO:0019031 ... R4NN21 24311689
    250407 4n62:C (2.5026) BS01 NGS ? GO:0019031 ... R4NN21 24311689
    250408 4n62:C (2.5026) BS02 SIA ? GO:0019031 ... R4NN21 24311689
    250409 4n63:A (2.7522) BS01 SIA ? GO:0019031 ... R4NN21 24311689
    250410 4n63:C (2.7522) BS01 SIA ? GO:0019031 ... R4NN21 24311689
    250411 4n64:A (2.7014) BS01 SIA ? GO:0019031 ... R4NN21 24311689
    250412 4n64:C (2.7014) BS01 SIA ? GO:0019031 ... R4NN21 24311689
    250413 4n65:A (1.816) BS01 FMN 1.6.5.-
    1.7.1.17
    GO:0003960 ... Q9I5F3 24915188
    250414 4n65:A (1.816) BS02 AQN 1.6.5.-
    1.7.1.17
    GO:0003960 ... Q9I5F3 24915188
    250415 4n65:B (1.816) BS01 AQN 1.6.5.-
    1.7.1.17
    GO:0003960 ... Q9I5F3 24915188
    250416 4n65:B (1.816) BS02 FMN 1.6.5.-
    1.7.1.17
    GO:0003960 ... Q9I5F3 24915188
    250417 4n66:E (1.44) BS01 ZN 3.4.24.27 GO:0004222 ... P00800 24623396
    250418 4n66:E (1.44) BS02 CA 3.4.24.27 GO:0004222 ... P00800 24623396
    250419 4n66:E (1.44) BS03 CA 3.4.24.27 GO:0004222 ... P00800 24623396
    250420 4n66:E (1.44) BS04 CA 3.4.24.27 GO:0004222 ... P00800 24623396
    250421 4n66:E (1.44) BS05 CA 3.4.24.27 GO:0004222 ... P00800 24623396
    250422 4n66:E (1.44) BS06 2GZ 3.4.24.27 GO:0004222 ... P00800 24623396
    250423 4n67:A (1.55) BS01 ADP 2.7.7.108 N/A A0A0H3LV04 34442725
    250424 4n67:A (1.55) BS02 MG 2.7.7.108 N/A A0A0H3LV04 34442725
    250425 4n69:A (1.8) BS01 SER 2.3.1.30 GO:0005737 ... I1KHY6 24225955
    250426 4n69:B (1.8) BS01 SER 2.3.1.30 GO:0005737 ... I1KHY6 24225955
    250427 4n6b:A (3.005) BS01 COA 2.3.1.30 GO:0005737 ... I1KHY6 24225955
    250428 4n6b:A (3.005) BS02 COA 2.3.1.30 GO:0005737 ... I1KHY6 24225955
    250429 4n6b:B (3.005) BS01 COA 2.3.1.30 GO:0005737 ... I1KHY6 24225955
    250430 4n6b:C (3.005) BS01 COA 2.3.1.30 GO:0005737 ... I1KHY6 24225955
    250431 4n6b:C (3.005) BS02 COA 2.3.1.30 GO:0005737 ... I1KHY6 24225955
    250432 4n6b:D (3.005) BS01 COA 2.3.1.30 GO:0005737 ... I1KHY6 24225955
    250433 4n6b:D (3.005) BS02 COA 2.3.1.30 GO:0005737 ... I1KHY6 24225955
    250434 4n6b:E (3.005) BS01 COA 2.3.1.30 GO:0005737 ... I1KHY6 24225955
    250435 4n6b:E (3.005) BS02 COA 2.3.1.30 GO:0005737 ... I1KHY6 24225955
    250436 4n6b:F (3.005) BS01 COA 2.3.1.30 GO:0005737 ... I1KHY6 24225955
    250437 4n6d:A (1.701) BS01 I3C ? GO:0055085 ... C6C297 25540822
    250438 4n6d:A (1.701) BS02 I3C ? GO:0055085 ... C6C297 25540822
    250439 4n6f:A (2.25) BS01 CA 2.8.1.10 GO:0009228 ... D7RFL7 24814342
    250440 4n6f:A (2.25) BS02 CA 2.8.1.10 GO:0009228 ... D7RFL7 24814342
    250441 4n6f:A (2.25) BS03 F6R 2.8.1.10 GO:0009228 ... D7RFL7 24814342
    250442 4n6f:B (2.25) BS01 CA 2.8.1.10 GO:0009228 ... D7RFL7 24814342
    250443 4n6f:B (2.25) BS02 CA 2.8.1.10 GO:0009228 ... D7RFL7 24814342
    250444 4n6f:B (2.25) BS03 F6R 2.8.1.10 GO:0009228 ... D7RFL7 24814342
    250445 4n6g:A (2.142) BS01 2GQ 3.4.22.59 GO:0001650 ... P55212 24259468
    250446 4n6g:B (2.142) BS01 2GQ 3.4.22.59 GO:0001650 ... P55212 24259468
    250447 4n6h:A (1.8) BS01 EJ4 ? GO:0004930 ... P0ABE7
    P41143
    24413399
    250448 4n6h:A (1.8) BS02 NA ? GO:0004930 ... P0ABE7
    P41143
    24413399
    250449 4n6k:A (1.2) BS01 X3X ? GO:0055085 ... C6BWG5 25540822
    250450 4n6p:A (1.4) BS01 peptide 3.4.21.- GO:0005576 ... P24627 N/A
    250451 4n6p:A (1.4) BS02 FE 3.4.21.- GO:0005576 ... P24627 N/A
    250452 4n6p:A (1.4) BS03 CO3 3.4.21.- GO:0005576 ... P24627 N/A
    250453 4n6p:A (1.4) BS04 JMS 3.4.21.- GO:0005576 ... P24627 N/A
    250454 4n6w:A (1.85) BS01 FE 1.13.11.78 N/A D0E8I5 24198335
    250455 4n6w:A (1.85) BS02 FE 1.13.11.78 N/A D0E8I5 24198335
    250456 4n6y:A (2.6) BS01 2HV 2.7.11.1 GO:0004672 ... P11309 24900629 BindingDB: Ki=90nM
    250457 4n6z:A (2.2) BS01 2HW 2.7.11.1 GO:0004672 ... P11309 24900629 MOAD: Ki=16nM
    BindingDB: Ki=16nM
    250458 4n70:A (2.1) BS01 2HX 2.7.11.1 GO:0004672 ... P11309 24900629 MOAD: Ki=0.001nM
    BindingDB: IC50=1nM, Ki=<1.000000nM
    250459 4n71:A (2.984) BS01 FE 1.13.11.78 N/A D0E8I5 24198335
    250460 4n71:A (2.984) BS02 FE 1.13.11.78 N/A D0E8I5 24198335
    250461 4n71:A (2.984) BS03 ODV 1.13.11.78 N/A D0E8I5 24198335
    250462 4n71:B (2.984) BS01 FE 1.13.11.78 N/A D0E8I5 24198335
    250463 4n71:B (2.984) BS02 FE 1.13.11.78 N/A D0E8I5 24198335
    250464 4n71:B (2.984) BS03 ODV 1.13.11.78 N/A D0E8I5 24198335
    250465 4n71:D (2.984) BS01 FE 1.13.11.78 N/A D0E8I5 24198335
    250466 4n71:D (2.984) BS02 FE 1.13.11.78 N/A D0E8I5 24198335
    250467 4n71:D (2.984) BS03 ODV 1.13.11.78 N/A D0E8I5 24198335
    250468 4n71:E (2.984) BS01 FE 1.13.11.78 N/A D0E8I5 24198335
    250469 4n71:E (2.984) BS02 FE 1.13.11.78 N/A D0E8I5 24198335
    250470 4n71:E (2.984) BS03 ODV 1.13.11.78 N/A D0E8I5 24198335
    250471 4n73:A (1.8662) BS01 COH ? GO:0003677 ... Q14995 24872411
    250472 4n76:A (2.89) BS01 dna 3.1.24.- GO:0003676 ... Q746M7 24374628
    250473 4n76:A (2.89) BS02 dna 3.1.24.- GO:0003676 ... Q746M7 24374628
    250474 4n76:A (2.89) BS03 DT 3.1.24.- GO:0003676 ... Q746M7 24374628
    250475 4n76:B (2.89) BS01 dna 3.1.24.- GO:0003676 ... Q746M7 24374628
    250476 4n76:B (2.89) BS02 dna 3.1.24.- GO:0003676 ... Q746M7 24374628
    250477 4n76:B (2.89) BS03 MN 3.1.24.- GO:0003676 ... Q746M7 24374628
    250478 4n76:B (2.89) BS04 MN 3.1.24.- GO:0003676 ... Q746M7 24374628
    250479 4n76:B (2.89) BS05 DT 3.1.24.- GO:0003676 ... Q746M7 24374628
    250480 4n78:A (2.43) BS01 peptide ? GO:0000340 ... Q7L576 24439376
    250481 4n78:F (2.43) BS01 peptide ? GO:0000423 ... Q9NYB9 24439376
    250482 4n7b:A (2.198) BS01 F3S 1.17.7.4 GO:0005515 ... Q8I295 24188825
    250483 4n7c:A (1.75) BS01 AEF ? GO:0030682 ... P54962 24769496 MOAD: Ka=22200000M^-1
    250484 4n7e:A (2.7) BS01 2JQ ? GO:0016020 ... Q99523 24355129 BindingDB: Ki=429nM, IC50=450nM
    250485 4n7g:A (2.25) BS01 peptide ? GO:0000122 ... P63104 24504455
    250486 4n7h:A (1.698) BS01 peptide 2.3.2.26 N/A P46934 24379409
    250487 4n7j:A (1.673) BS01 2GQ 3.4.22.59 GO:0001650 ... P55212 24259468
    250488 4n7j:B (1.673) BS01 2GQ 3.4.22.59 GO:0001650 ... P55212 24259468
    250489 4n7k:L (2.85) BS01 2GO ? GO:0009772 ... P0C0Y8 24316146
    250490 4n7k:L (2.85) BS02 2GO ? GO:0009772 ... P0C0Y8 24316146
    250491 4n7k:L (2.85) BS03 U10 ? GO:0009772 ... P0C0Y8 24316146
    250492 4n7k:L (2.85) BS04 2GO ? GO:0009772 ... P0C0Y8 24316146
    250493 4n7k:L (2.85) BS05 2GO ? GO:0009772 ... P0C0Y8 24316146
    250494 4n7k:L (2.85) BS06 FE ? GO:0009772 ... P0C0Y8 24316146
    250495 4n7k:L (2.85) BS07 2GO ? GO:0009772 ... P0C0Y8 24316146
    250496 4n7k:M (2.85) BS01 2GO ? GO:0009772 ... P0C0Y9 24316146
    250497 4n7k:M (2.85) BS02 2GO ? GO:0009772 ... P0C0Y9 24316146
    250498 4n7k:M (2.85) BS03 2GO ? GO:0009772 ... P0C0Y9 24316146
    250499 4n7k:M (2.85) BS04 2GO ? GO:0009772 ... P0C0Y9 24316146
    250500 4n7k:M (2.85) BS05 FE ? GO:0009772 ... P0C0Y9 24316146
    250501 4n7k:M (2.85) BS06 2GO ? GO:0009772 ... P0C0Y9 24316146
    250502 4n7k:M (2.85) BS07 U10 ? GO:0009772 ... P0C0Y9 24316146
    250503 4n7k:M (2.85) BS08 SPO ? GO:0009772 ... P0C0Y9 24316146
    250504 4n7l:L (2.85) BS01 U10 ? GO:0009772 ... Q3J1A5 24316146
    250505 4n7l:L (2.85) BS02 2GO ? GO:0009772 ... Q3J1A5 24316146
    250506 4n7l:L (2.85) BS03 2GO ? GO:0009772 ... Q3J1A5 24316146
    250507 4n7l:L (2.85) BS04 2GO ? GO:0009772 ... Q3J1A5 24316146
    250508 4n7l:L (2.85) BS05 2GO ? GO:0009772 ... Q3J1A5 24316146
    250509 4n7l:L (2.85) BS06 2GO ? GO:0009772 ... Q3J1A5 24316146
    250510 4n7l:L (2.85) BS07 FE ? GO:0009772 ... Q3J1A5 24316146
    250511 4n7l:L (2.85) BS08 U10 ? GO:0009772 ... Q3J1A5 24316146
    250512 4n7l:M (2.85) BS01 2GO ? GO:0009772 ... Q3J1A6 24316146
    250513 4n7l:M (2.85) BS02 2GO ? GO:0009772 ... Q3J1A6 24316146
    250514 4n7l:M (2.85) BS03 2GO ? GO:0009772 ... Q3J1A6 24316146
    250515 4n7l:M (2.85) BS04 2GO ? GO:0009772 ... Q3J1A6 24316146
    250516 4n7l:M (2.85) BS05 2GO ? GO:0009772 ... Q3J1A6 24316146
    250517 4n7l:M (2.85) BS06 FE ? GO:0009772 ... Q3J1A6 24316146
    250518 4n7l:M (2.85) BS07 U10 ? GO:0009772 ... Q3J1A6 24316146
    250519 4n7l:M (2.85) BS08 SPO ? GO:0009772 ... Q3J1A6 24316146
    250520 4n7m:A (2.125) BS01 2GQ 3.4.22.59 GO:0001650 ... P55212 24259468 MOAD: Kd=3.4uM
    250521 4n7m:B (2.125) BS01 2GQ 3.4.22.59 GO:0001650 ... P55212 24259468
    250522 4n7n:A (2.754) BS01 HEM ? GO:0004601 ... P69905 24635037
    250523 4n7n:B (2.754) BS01 HEM ? GO:0004601 ... P68871 24635037
    250524 4n7n:C (2.754) BS01 HEM ? GO:0004601 ... P69905 24635037
    250525 4n7n:D (2.754) BS01 HEM ? GO:0004601 ... P68871 24635037
    250526 4n7n:E (2.754) BS01 HEM ? GO:0004601 ... P69905 24635037
    250527 4n7n:F (2.754) BS01 HEM ? GO:0004601 ... P68871 24635037
    250528 4n7n:G (2.754) BS01 HEM ? GO:0004601 ... P69905 24635037
    250529 4n7n:H (2.754) BS01 HEM ? GO:0004601 ... P68871 24635037
    250530 4n7n:I (2.754) BS01 HEM ? GO:0004601 ... P69905 24635037
    250531 4n7n:J (2.754) BS01 HEM ? GO:0004601 ... P68871 24635037
    250532 4n7n:K (2.754) BS01 HEM ? GO:0004601 ... P69905 24635037
    250533 4n7n:L (2.754) BS01 HEM ? GO:0004601 ... P68871 24635037
    250534 4n7o:A (2.502) BS01 HNI ? GO:0004601 ... P69905 24635037
    250535 4n7o:B (2.502) BS01 HEM ? GO:0004601 ... P68871 24635037
    250536 4n7o:C (2.502) BS01 HEM ? GO:0004601 ... P69905 24635037
    250537 4n7o:D (2.502) BS01 HNI ? GO:0004601 ... P68871 24635037
    250538 4n7o:E (2.502) BS01 HNI ? GO:0004601 ... P69905 24635037
    250539 4n7o:F (2.502) BS01 HEM ? GO:0004601 ... P68871 24635037
    250540 4n7o:G (2.502) BS01 HEM ? GO:0004601 ... P69905 24635037
    250541 4n7o:H (2.502) BS01 HNI ? GO:0004601 ... P68871 24635037
    250542 4n7o:I (2.502) BS01 HNI ? GO:0004601 ... P69905 24635037
    250543 4n7o:J (2.502) BS01 HEM ? GO:0004601 ... P68871 24635037
    250544 4n7o:K (2.502) BS01 HEM ? GO:0004601 ... P69905 24635037
    250545 4n7o:L (2.502) BS01 HNI ? GO:0004601 ... P68871 24635037
    250546 4n7p:A (2.809) BS01 HNI ? GO:0004601 ... P69905 24635037
    250547 4n7p:B (2.809) BS01 HEM ? GO:0004601 ... P68871 24635037
    250548 4n7p:C (2.809) BS01 HEM ? GO:0004601 ... P69905 24635037
    250549 4n7p:D (2.809) BS01 HNI ? GO:0004601 ... P68871 24635037
    250550 4n7p:E (2.809) BS01 HNI ? GO:0004601 ... P69905 24635037
    250551 4n7p:F (2.809) BS01 HEM ? GO:0004601 ... P68871 24635037
    250552 4n7p:G (2.809) BS01 HEM ? GO:0004601 ... P69905 24635037
    250553 4n7p:H (2.809) BS01 HNI ? GO:0004601 ... P68871 24635037
    250554 4n7p:I (2.809) BS01 HNI ? GO:0004601 ... P69905 24635037
    250555 4n7p:J (2.809) BS01 HEM ? GO:0004601 ... P68871 24635037
    250556 4n7p:K (2.809) BS01 HEM ? GO:0004601 ... P69905 24635037
    250557 4n7p:L (2.809) BS01 HNI ? GO:0004601 ... P68871 24635037
    250558 4n7q:A (1.6) BS01 CO 4.1.99.17 GO:0009228 ... O82392 24161603
    250559 4n7s:A (2.101) BS01 ZN 3.2.1.17 GO:0003796 ... Q9HYC5 24724564
    250560 4n7s:A (2.101) BS02 ZN 3.2.1.17 GO:0003796 ... Q9HYC5 24724564
    250561 4n7s:A (2.101) BS03 CA 3.2.1.17 GO:0003796 ... Q9HYC5 24724564
    250562 4n7s:C (2.101) BS01 ZN 3.2.1.17 GO:0003796 ... Q9HYC5 24724564
    250563 4n7s:C (2.101) BS02 ZN 3.2.1.17 GO:0003796 ... Q9HYC5 24724564
    250564 4n7s:C (2.101) BS03 CA 3.2.1.17 GO:0003796 ... Q9HYC5 24724564
    250565 4n7t:A (1.996) BS01 MN 5.4.2.7 GO:0000287 ... Q8DTU0 N/A
    250566 4n7t:A (1.996) BS02 MN 5.4.2.7 GO:0000287 ... Q8DTU0 N/A
    250567 4n7t:B (1.996) BS01 MN 5.4.2.7 GO:0000287 ... Q8DTU0 N/A
    250568 4n7t:B (1.996) BS02 MN 5.4.2.7 GO:0000287 ... Q8DTU0 N/A
    250569 4n7u:A (1.4598) BS01 2JA ? N/A O00481 24703779 MOAD: Kd=0.51uM
    BindingDB: IC50=7870nM, EC50=2.0nM
    250570 4n7w:A (1.951) BS01 MPG N/A GO:0016020 ... N/A 24317697
    250571 4n7w:B (1.951) BS01 MPG N/A GO:0016020 ... N/A 24317697
    250572 4n7y:A (2.16) BS01 peptide ? GO:0000122 ... P63104 24504455
    250573 4n7y:B (2.16) BS01 peptide ? GO:0000122 ... P63104 24504455
    250574 4n7z:A (2.85) BS01 peptide 2.7.11.21 N/A O00444 24997597
    250575 4n80:A (2.4) BS01 ZN 3.2.1.17 GO:0003796 ... Q9HYC5 24724564
    250576 4n80:A (2.4) BS02 CA 3.2.1.17 GO:0003796 ... Q9HYC5 24724564
    250577 4n80:A (2.4) BS03 CA 3.2.1.17 GO:0003796 ... Q9HYC5 24724564
    250578 4n82:A (1.88) BS01 FMN ? GO:0010181 ... A3CR20 24381172
    250579 4n82:B (1.88) BS01 FMN ? GO:0010181 ... A3CR20 24381172
    250580 4n83:A (2.65) BS01 MN 1.17.4.1 GO:0004748 ... A3CLZ4 24381172
    250581 4n83:A (2.65) BS02 MN 1.17.4.1 GO:0004748 ... A3CLZ4 24381172
    250582 4n83:B (2.65) BS01 MN 1.17.4.1 GO:0004748 ... A3CLZ4 24381172
    250583 4n83:B (2.65) BS02 MN 1.17.4.1 GO:0004748 ... A3CLZ4 24381172
    250584 4n83:C (2.65) BS01 MN 1.17.4.1 GO:0004748 ... A3CLZ4 24381172
    250585 4n83:C (2.65) BS02 MN 1.17.4.1 GO:0004748 ... A3CLZ4 24381172
    250586 4n83:D (2.65) BS01 MN 1.17.4.1 GO:0004748 ... A3CLZ4 24381172
    250587 4n83:D (2.65) BS02 MN 1.17.4.1 GO:0004748 ... A3CLZ4 24381172
    250588 4n83:E (2.65) BS01 MN 1.17.4.1 GO:0004748 ... A3CLZ4 24381172
    250589 4n83:E (2.65) BS02 MN 1.17.4.1 GO:0004748 ... A3CLZ4 24381172
    250590 4n83:F (2.65) BS01 MN 1.17.4.1 GO:0004748 ... A3CLZ4 24381172
    250591 4n83:F (2.65) BS02 MN 1.17.4.1 GO:0004748 ... A3CLZ4 24381172
    250592 4n83:G (2.65) BS01 MN 1.17.4.1 GO:0004748 ... A3CLZ4 24381172
    250593 4n83:G (2.65) BS02 MN 1.17.4.1 GO:0004748 ... A3CLZ4 24381172
    250594 4n83:H (2.65) BS01 MN 1.17.4.1 GO:0004748 ... A3CLZ4 24381172
    250595 4n83:H (2.65) BS02 MN 1.17.4.1 GO:0004748 ... A3CLZ4 24381172
    250596 4n84:A (2.5) BS01 peptide ? GO:0000122 ... P63104 24504455
    250597 4n84:B (2.5) BS01 peptide ? GO:0000122 ... P63104 24504455
    250598 4n85:A (1.6) BS01 CA ? N/A P02766 24422526
    250599 4n85:A (1.6) BS02 CA ? N/A P02766 24422526
    250600 4n85:B (1.6) BS01 CA ? N/A P02766 24422526

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).