SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    251401 4nfw:G (2.3) BS02 MN N/A GO:0004787 ... N/A 24816099
    251402 4nfw:H (2.3) BS01 MN N/A GO:0004787 ... N/A 24816099
    251403 4nfw:J (2.3) BS01 MN N/A GO:0004787 ... N/A 24816099
    251404 4nfw:K (2.3) BS01 MN N/A GO:0004787 ... N/A 24816099
    251405 4nfz:A (2.7) BS01 MN ? GO:0003723 ... H6QM92 24284327
    251406 4nfz:B (2.7) BS01 MN ? GO:0003723 ... H6QM92 24284327
    251407 4nfz:C (2.7) BS01 MN ? GO:0003723 ... H6QM92 24284327
    251408 4ng2:A (2.413) BS01 OHN ? N/A P25084 24319092 BindingDB: EC50=139nM
    251409 4ng2:B (2.413) BS01 OHN ? N/A P25084 24319092 BindingDB: EC50=139nM
    251410 4ng2:C (2.413) BS01 OHN ? N/A P25084 24319092 BindingDB: EC50=139nM
    251411 4ng2:D (2.413) BS01 OHN ? N/A P25084 24319092 BindingDB: EC50=139nM
    251412 4ng3:A (1.751) BS01 MN ? GO:0005737 ... Q8RJ47 N/A
    251413 4ng3:A (1.751) BS02 1DF ? GO:0005737 ... Q8RJ47 N/A
    251414 4ng3:B (1.751) BS01 MN ? GO:0005737 ... Q8RJ47 N/A
    251415 4ng3:B (1.751) BS02 1DF ? GO:0005737 ... Q8RJ47 N/A
    251416 4ng3:C (1.751) BS01 MN ? GO:0005737 ... Q8RJ47 N/A
    251417 4ng3:C (1.751) BS02 1DF ? GO:0005737 ... Q8RJ47 N/A
    251418 4ng3:D (1.751) BS01 MN ? GO:0005737 ... Q8RJ47 N/A
    251419 4ng3:D (1.751) BS02 1DF ? GO:0005737 ... Q8RJ47 N/A
    251420 4ng3:E (1.751) BS01 MN ? GO:0005737 ... Q8RJ47 N/A
    251421 4ng3:E (1.751) BS02 1DF ? GO:0005737 ... Q8RJ47 N/A
    251422 4ng3:F (1.751) BS01 MN ? GO:0005737 ... Q8RJ47 N/A
    251423 4ng3:F (1.751) BS02 1DF ? GO:0005737 ... Q8RJ47 N/A
    251424 4ng3:G (1.751) BS01 MN ? GO:0005737 ... Q8RJ47 N/A
    251425 4ng3:G (1.751) BS02 1DF ? GO:0005737 ... Q8RJ47 N/A
    251426 4ng3:H (1.751) BS01 MN ? GO:0005737 ... Q8RJ47 N/A
    251427 4ng3:H (1.751) BS02 1DF ? GO:0005737 ... Q8RJ47 N/A
    251428 4ng4:A (2.78) BS01 MG 2.7.2.3 GO:0004618 ... Q83AU6 26033498
    251429 4ng4:A (2.78) BS02 ADP 2.7.2.3 GO:0004618 ... Q83AU6 26033498
    251430 4ng4:B (2.78) BS01 MG 2.7.2.3 GO:0004618 ... Q83AU6 26033498
    251431 4ng4:B (2.78) BS02 ADP 2.7.2.3 GO:0004618 ... Q83AU6 26033498
    251432 4ng4:C (2.78) BS01 MG 2.7.2.3 GO:0004618 ... Q83AU6 26033498
    251433 4ng4:C (2.78) BS02 ADP 2.7.2.3 GO:0004618 ... Q83AU6 26033498
    251434 4ng5:A (1.1) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 24437493
    251435 4ng5:A (1.1) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 24437493
    251436 4ng5:A (1.1) BS03 NAJ 1.1.1.1 GO:0004022 ... P00327 24437493
    251437 4ng5:A (1.1) BS04 PFB 1.1.1.1 GO:0004022 ... P00327 24437493 MOAD: Ki=1.9uM
    251438 4ng5:B (1.1) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 24437493
    251439 4ng5:B (1.1) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 24437493
    251440 4ng5:B (1.1) BS03 NAJ 1.1.1.1 GO:0004022 ... P00327 24437493
    251441 4ng5:B (1.1) BS04 PFB 1.1.1.1 GO:0004022 ... P00327 24437493 MOAD: Ki=1.9uM
    251442 4ng6:A (2.35) BS01 MG 2.5.1.1
    2.5.1.10
    GO:0004659 ... P14324 N/A
    251443 4ng6:A (2.35) BS02 MG 2.5.1.1
    2.5.1.10
    GO:0004659 ... P14324 N/A
    251444 4ng6:A (2.35) BS03 IPE 2.5.1.1
    2.5.1.10
    GO:0004659 ... P14324 N/A
    251445 4ng6:A (2.35) BS04 RIS 2.5.1.1
    2.5.1.10
    GO:0004659 ... P14324 N/A BindingDB: IC50=11nM, Ki=82.2nM
    251446 4ng8:A (1.09) BS01 CL 3.2.1.17 GO:0003796 ... P00698 25084340
    251447 4ng9:H (2.2) BS01 2KE 3.4.21.21 GO:0004252 ... P08709 24900796
    251448 4ng9:H (2.2) BS02 CA 3.4.21.21 GO:0004252 ... P08709 24900796
    251449 4nga:H (2.15) BS01 2KF 3.4.21.21 GO:0004252 ... P08709 24900796
    251450 4nga:H (2.15) BS02 CA 3.4.21.21 GO:0004252 ... P08709 24900796
    251451 4ngb:A (2.25) BS01 rna 3.1.26.3 GO:0003723 ... Q9UPY3 24486018
    251452 4ngc:A (2.104) BS01 rna 3.1.26.3 GO:0003723 ... Q9UPY3 24486018
    251453 4ngd:A (1.958) BS01 rna 3.1.26.3 GO:0003723 ... Q9UPY3 24486018
    251454 4nge:A (2.704) BS01 peptide 3.4.24.- GO:0004222 ... Q5JRX3 24931469
    251455 4nge:A (2.704) BS02 peptide 3.4.24.- GO:0004222 ... Q5JRX3 24931469
    251456 4nge:A (2.704) BS03 ZN 3.4.24.- GO:0004222 ... Q5JRX3 24931469
    251457 4nge:D (2.704) BS01 peptide 3.4.24.- GO:0004222 ... Q5JRX3 24931469
    251458 4nge:D (2.704) BS02 peptide 3.4.24.- GO:0004222 ... Q5JRX3 24931469
    251459 4nge:D (2.704) BS03 ZN 3.4.24.- GO:0004222 ... Q5JRX3 24931469
    251460 4ngf:A (3.101) BS01 rna 3.1.26.3 GO:0003723 ... Q9UPY3 24486018
    251461 4ngf:A (3.101) BS02 rna 3.1.26.3 GO:0003723 ... Q9UPY3 24486018
    251462 4ngf:B (3.101) BS01 rna 3.1.26.3 GO:0003723 ... Q9UPY3 24486018
    251463 4ngf:B (3.101) BS02 rna 3.1.26.3 GO:0003723 ... Q9UPY3 24486018
    251464 4ngf:C (3.101) BS01 rna 3.1.26.3 GO:0003723 ... Q9UPY3 24486018
    251465 4ngf:C (3.101) BS02 rna 3.1.26.3 GO:0003723 ... Q9UPY3 24486018
    251466 4ngf:D (3.101) BS01 rna 3.1.26.3 GO:0003723 ... Q9UPY3 24486018
    251467 4ngf:D (3.101) BS02 rna 3.1.26.3 GO:0003723 ... Q9UPY3 24486018
    251468 4ngg:A (2.6) BS01 rna 3.1.26.3 GO:0003723 ... Q9UPY3 24486018
    251469 4ngg:A (2.6) BS02 PO4 3.1.26.3 GO:0003723 ... Q9UPY3 24486018
    251470 4ngh:H (2.68) BS01 peptide N/A N/A N/A 25420104
    251471 4ngh:L (2.68) BS01 peptide N/A N/A N/A 25420104
    251472 4ngj:A (1.1) BS01 CL 3.2.1.17 GO:0003796 ... P00698 25084340
    251473 4ngm:A (1.84) BS01 ZN 3.4.17.21 GO:0004180 ... Q04609 24954515
    251474 4ngm:A (1.84) BS02 ZN 3.4.17.21 GO:0004180 ... Q04609 24954515
    251475 4ngm:A (1.84) BS03 CA 3.4.17.21 GO:0004180 ... Q04609 24954515
    251476 4ngm:A (1.84) BS04 JB7 3.4.17.21 GO:0004180 ... Q04609 24954515 BindingDB: Ki=0.044900nM
    251477 4ngn:A (1.64) BS01 ZN 3.4.17.21 GO:0004180 ... Q04609 24954515
    251478 4ngn:A (1.64) BS02 ZN 3.4.17.21 GO:0004180 ... Q04609 24954515
    251479 4ngn:A (1.64) BS03 CA 3.4.17.21 GO:0004180 ... Q04609 24954515
    251480 4ngn:A (1.64) BS04 J96 3.4.17.21 GO:0004180 ... Q04609 24954515
    251481 4ngp:A (1.63) BS01 J31 3.4.17.21 GO:0004180 ... Q04609 24954515 BindingDB: Ki=11nM
    251482 4ngp:A (1.63) BS02 ZN 3.4.17.21 GO:0004180 ... Q04609 24954515
    251483 4ngp:A (1.63) BS03 ZN 3.4.17.21 GO:0004180 ... Q04609 24954515
    251484 4ngp:A (1.63) BS04 CA 3.4.17.21 GO:0004180 ... Q04609 24954515
    251485 4ngq:A (2.08) BS01 ZN 3.4.17.21 GO:0004180 ... Q04609 24954515
    251486 4ngq:A (2.08) BS02 ZN 3.4.17.21 GO:0004180 ... Q04609 24954515
    251487 4ngq:A (2.08) BS03 CA 3.4.17.21 GO:0004180 ... Q04609 24954515
    251488 4ngq:A (2.08) BS04 J37 3.4.17.21 GO:0004180 ... Q04609 24954515
    251489 4ngr:A (1.9) BS01 J21 3.4.17.21 GO:0004180 ... Q04609 24954515 BindingDB: Ki=0.268000nM
    251490 4ngr:A (1.9) BS02 ZN 3.4.17.21 GO:0004180 ... Q04609 24954515
    251491 4ngr:A (1.9) BS03 ZN 3.4.17.21 GO:0004180 ... Q04609 24954515
    251492 4ngr:A (1.9) BS04 CA 3.4.17.21 GO:0004180 ... Q04609 24954515
    251493 4ngs:A (1.68) BS01 J34 3.4.17.21 GO:0004180 ... Q04609 24954515 BindingDB: Ki=0.377000nM
    251494 4ngs:A (1.68) BS02 ZN 3.4.17.21 GO:0004180 ... Q04609 24954515
    251495 4ngs:A (1.68) BS03 ZN 3.4.17.21 GO:0004180 ... Q04609 24954515
    251496 4ngs:A (1.68) BS04 CA 3.4.17.21 GO:0004180 ... Q04609 24954515
    251497 4ngt:A (2.31) BS01 ZN 3.4.17.21 GO:0004180 ... Q04609 24954515
    251498 4ngt:A (2.31) BS02 ZN 3.4.17.21 GO:0004180 ... Q04609 24954515
    251499 4ngt:A (2.31) BS03 CA 3.4.17.21 GO:0004180 ... Q04609 24954515
    251500 4ngt:A (2.31) BS04 J42 3.4.17.21 GO:0004180 ... Q04609 24954515 BindingDB: Ki=3.9nM
    251501 4ngu:A (2.5) BS01 DAL ? GO:0030246 ... Q311Q1 25540822
    251502 4ngu:A (2.5) BS02 DAL ? GO:0030246 ... Q311Q1 25540822
    251503 4ngw:A (1.37) BS01 CL 3.2.1.17 GO:0003796 ... P00698 25084340
    251504 4ngy:A (1.35) BS01 CL 3.2.1.17 GO:0003796 ... P00698 25084340
    251505 4ngz:A (1.7) BS01 CL 3.2.1.17 GO:0003796 ... P00698 25084340
    251506 4nh0:A (2.9) BS01 MG ? GO:0000166 ... D1A4G7 25865481
    251507 4nh0:A (2.9) BS02 ATP ? GO:0000166 ... D1A4G7 25865481
    251508 4nh0:A (2.9) BS03 ATP ? GO:0000166 ... D1A4G7 25865481
    251509 4nh0:B (2.9) BS01 MG ? GO:0000166 ... D1A4G7 25865481
    251510 4nh0:B (2.9) BS02 ATP ? GO:0000166 ... D1A4G7 25865481
    251511 4nh0:B (2.9) BS03 ATP ? GO:0000166 ... D1A4G7 25865481
    251512 4nh1:A (3.3) BS01 MG 2.7.11.1 GO:0004672 ... P68400 24594356
    251513 4nh1:A (3.3) BS02 ACP 2.7.11.1 GO:0004672 ... P68400 24594356
    251514 4nh1:B (3.3) BS01 MG 2.7.11.1 GO:0004672 ... P68400 24594356
    251515 4nh1:B (3.3) BS02 ACP 2.7.11.1 GO:0004672 ... P68400 24594356
    251516 4nh1:C (3.3) BS01 ZN ? GO:0000785 ... P67870 24594356
    251517 4nh1:D (3.3) BS01 ZN ? GO:0000785 ... P67870 24594356
    251518 4nh2:A (2.3) BS01 P6L N/A GO:0008519 ... N/A 24899312
    251519 4nh2:A (2.3) BS02 P6L N/A GO:0008519 ... N/A 24899312
    251520 4nh2:B (2.3) BS01 P6L N/A GO:0008519 ... N/A 24899312
    251521 4nh2:B (2.3) BS02 P6L N/A GO:0008519 ... N/A 24899312
    251522 4nh2:C (2.3) BS01 P6L N/A GO:0008519 ... N/A 24899312
    251523 4nh2:C (2.3) BS02 P6L N/A GO:0008519 ... N/A 24899312
    251524 4nh2:D (2.3) BS01 P6L N/A GO:0008519 ... N/A 24899312
    251525 4nh2:E (2.3) BS01 P6L N/A GO:0008519 ... N/A 24899312
    251526 4nh2:F (2.3) BS01 P6L N/A GO:0008519 ... N/A 24899312
    251527 4nh2:F (2.3) BS02 P6L N/A GO:0008519 ... N/A 24899312
    251528 4nh3:A (2.616) BS01 rna 3.1.26.3 GO:0003723 ... Q9UPY3 24486018
    251529 4nh4:A (2.1) BS01 NAP ? GO:0006950 ... A0A096LNF0 N/A
    251530 4nh4:B (2.1) BS01 NAP ? GO:0006950 ... A0A096LNF0 N/A
    251531 4nh5:A (2.55) BS01 rna 3.1.26.3 GO:0003723 ... Q9UPY3 24486018
    251532 4nh6:A (2.551) BS01 rna 3.1.26.3 GO:0003723 ... Q9UPY3 24486018
    251533 4nh7:A (2.0) BS01 E0G 3.6.4.10 GO:0005524 ... P07900 24332488 MOAD: Ki=4nM
    BindingDB: Kd=4.0nM
    251534 4nh7:B (2.0) BS01 E0G 3.6.4.10 GO:0005524 ... P07900 24332488 MOAD: Ki=4nM
    BindingDB: Kd=4.0nM
    251535 4nh8:A (1.65) BS01 2LC 3.6.4.10 GO:0005524 ... P07900 24332488 MOAD: Ki=3nM
    251536 4nh9:A (2.77) BS01 2LC ? GO:0005524 ... P14625 24332488 BindingDB: Ki=375nM
    251537 4nha:A (3.401) BS01 rna 3.1.26.3 GO:0003723 ... Q9UPY3 24486018
    251538 4nhb:A (1.902) BS01 G3P ? GO:0055085 ... B8J100 25540822
    251539 4nhb:B (1.902) BS01 G3P ? GO:0055085 ... B8J100 25540822
    251540 4nhc:H (2.912) BS01 peptide N/A N/A N/A 25420104
    251541 4nhc:H (2.912) BS02 TFA N/A N/A N/A 25420104
    251542 4nhc:L (2.912) BS01 peptide N/A N/A N/A 25420104
    251543 4nhc:L (2.912) BS02 TFA N/A N/A N/A 25420104
    251544 4nhd:A (1.78) BS01 COA 2.3.1.180 GO:0004315 ... Q9KQH5 N/A
    251545 4nhd:A (1.78) BS02 CA 2.3.1.180 GO:0004315 ... Q9KQH5 N/A
    251546 4nhd:B (1.78) BS01 COA 2.3.1.180 GO:0004315 ... Q9KQH5 N/A
    251547 4nhd:B (1.78) BS02 CA 2.3.1.180 GO:0004315 ... Q9KQH5 N/A
    251548 4nhd:B (1.78) BS03 CA 2.3.1.180 GO:0004315 ... Q9KQH5 N/A
    251549 4nhd:C (1.78) BS01 COA 2.3.1.180 GO:0004315 ... Q9KQH5 N/A
    251550 4nhd:C (1.78) BS02 CA 2.3.1.180 GO:0004315 ... Q9KQH5 N/A
    251551 4nhd:C (1.78) BS03 CA 2.3.1.180 GO:0004315 ... Q9KQH5 N/A
    251552 4nhd:D (1.78) BS01 COA 2.3.1.180 GO:0004315 ... Q9KQH5 N/A
    251553 4nhd:D (1.78) BS02 CA 2.3.1.180 GO:0004315 ... Q9KQH5 N/A
    251554 4nhd:D (1.78) BS03 CA 2.3.1.180 GO:0004315 ... Q9KQH5 N/A
    251555 4nhe:A (1.95) BS01 NAP ? GO:0000166 ... A0A0H2UR04 N/A
    251556 4nhe:B (1.95) BS01 NAP ? GO:0000166 ... A0A0H2UR04 N/A
    251557 4nhe:C (1.95) BS01 NAP ? GO:0000166 ... A0A0H2UR04 N/A
    251558 4nhf:B (2.0) BS01 CA ? GO:0016020 ... C6AAT5 26646013
    251559 4nhf:C (2.0) BS01 CA ? GO:0016020 ... C6AAT5 26646013
    251560 4nhf:F (2.0) BS01 CA ? GO:0016020 ... C6AAT5 26646013
    251561 4nhj:A (2.701) BS01 dna ? GO:0000160 ... A6T8N1 24990372
    251562 4nhj:A (2.701) BS02 dna ? GO:0000160 ... A6T8N1 24990372
    251563 4nhj:B (2.701) BS01 dna ? GO:0000160 ... A6T8N1 24990372
    251564 4nhj:B (2.701) BS02 dna ? GO:0000160 ... A6T8N1 24990372
    251565 4nhk:A (1.9) BS01 MN 1.14.11.- GO:0000288 ... P40032 25728928
    251566 4nhk:A (1.9) BS02 PD2 1.14.11.- GO:0000288 ... P40032 25728928
    251567 4nhl:A (2.84) BS01 MN 1.14.11.- GO:0000288 ... P40032 25728928
    251568 4nhl:A (2.84) BS02 OGA 1.14.11.- GO:0000288 ... P40032 25728928
    251569 4nhm:A (1.9) BS01 UN9 1.14.11.- GO:0000288 ... P40032 25728928
    251570 4nhm:A (1.9) BS02 MN 1.14.11.- GO:0000288 ... P40032 25728928
    251571 4nhp:A (1.42) BS01 2T8 3.2.1.17 GO:0003796 ... P00698 25215611
    251572 4nhp:A (1.42) BS02 2T8 3.2.1.17 GO:0003796 ... P00698 25215611
    251573 4nhq:A (1.92) BS01 2T8 3.2.1.17 GO:0003796 ... P00698 25215611
    251574 4nhq:A (1.92) BS02 2T8 3.2.1.17 GO:0003796 ... P00698 25215611
    251575 4nhq:A (1.92) BS03 2T8 3.2.1.17 GO:0003796 ... P00698 25215611
    251576 4nhs:A (1.99) BS01 2T8 3.2.1.17 GO:0003796 ... P00698 25215611
    251577 4nht:A (1.65) BS01 2T8 3.2.1.17 GO:0003796 ... P00698 25215611
    251578 4nht:A (1.65) BS02 2T8 3.2.1.17 GO:0003796 ... P00698 25215611
    251579 4nht:A (1.65) BS03 2T8 3.2.1.17 GO:0003796 ... P00698 25215611
    251580 4nht:A (1.65) BS04 2T8 3.2.1.17 GO:0003796 ... P00698 25215611
    251581 4nht:A (1.65) BS05 2T8 3.2.1.17 GO:0003796 ... P00698 25215611
    251582 4nhw:A (2.0) BS01 GSH N/A N/A N/A N/A
    251583 4nhw:B (2.0) BS01 GSH N/A N/A N/A N/A
    251584 4nhw:C (2.0) BS01 GSH N/A N/A N/A N/A
    251585 4nhw:D (2.0) BS01 GSH N/A N/A N/A N/A
    251586 4nhx:A (2.105) BS01 MN 1.14.11.- GO:0005506 ... Q8N543 25728928
    251587 4nhx:A (2.105) BS02 OGA 1.14.11.- GO:0005506 ... Q8N543 25728928
    251588 4nhy:A (2.603) BS01 MN 1.14.11.- GO:0005506 ... Q8N543 25728928
    251589 4nhy:A (2.603) BS02 PD2 1.14.11.- GO:0005506 ... Q8N543 25728928
    251590 4nhy:B (2.603) BS01 MN 1.14.11.- GO:0005506 ... Q8N543 25728928
    251591 4nhy:B (2.603) BS02 PD2 1.14.11.- GO:0005506 ... Q8N543 25728928
    251592 4nhy:C (2.603) BS01 MN 1.14.11.- GO:0005506 ... Q8N543 25728928
    251593 4nhy:C (2.603) BS02 PD2 1.14.11.- GO:0005506 ... Q8N543 25728928
    251594 4nhy:D (2.603) BS01 MN 1.14.11.- GO:0005506 ... Q8N543 25728928
    251595 4nhy:D (2.603) BS02 PD2 1.14.11.- GO:0005506 ... Q8N543 25728928
    251596 4nhz:A (1.901) BS01 GSH N/A N/A N/A N/A
    251597 4nhz:B (1.901) BS01 GSH N/A N/A N/A N/A
    251598 4nhz:C (1.901) BS01 GSH N/A N/A N/A N/A
    251599 4nhz:D (1.901) BS01 GSH N/A N/A N/A N/A
    251600 4nhz:E (1.901) BS01 GSH N/A N/A N/A N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).