SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    255001 4oq3:A (2.3) BS01 2V8 2.3.2.27 GO:0005634 ... Q00987 24704029 MOAD: ic50=0.008uM
    BindingDB: IC50=8.0nM
    255002 4oq3:A (2.3) BS02 2V8 2.3.2.27 GO:0005634 ... Q00987 24704029 MOAD: ic50=0.008uM
    BindingDB: IC50=8.0nM
    255003 4oq3:B (2.3) BS01 2V8 2.3.2.27 GO:0005634 ... Q00987 24704029 MOAD: ic50=0.008uM
    BindingDB: IC50=8.0nM
    255004 4oq3:C (2.3) BS01 2V8 2.3.2.27 GO:0005634 ... Q00987 24704029 MOAD: ic50=0.008uM
    BindingDB: IC50=8.0nM
    255005 4oq3:D (2.3) BS01 2V8 2.3.2.27 GO:0005634 ... Q00987 24704029 MOAD: ic50=0.008uM
    BindingDB: IC50=8.0nM
    255006 4oq5:A (2.86) BS01 2UU ? GO:0042981 ... Q07820 24582986 BindingDB: IC50=500nM
    255007 4oq5:A (2.86) BS02 2UU ? GO:0042981 ... Q07820 24582986 BindingDB: IC50=500nM
    255008 4oq5:B (2.86) BS01 2UU ? GO:0042981 ... Q07820 24582986 BindingDB: IC50=500nM
    255009 4oq5:C (2.86) BS01 2UU ? GO:0042981 ... Q07820 24582986 BindingDB: IC50=500nM
    255010 4oq5:C (2.86) BS02 2UU ? GO:0042981 ... Q07820 24582986 BindingDB: IC50=500nM
    255011 4oq5:D (2.86) BS01 2UU ? GO:0042981 ... Q07820 24582986 BindingDB: IC50=500nM
    255012 4oq5:D (2.86) BS02 2UU ? GO:0042981 ... Q07820 24582986 BindingDB: IC50=500nM
    255013 4oq5:E (2.86) BS01 2UU ? GO:0042981 ... Q07820 24582986 BindingDB: IC50=500nM
    255014 4oq5:F (2.86) BS01 2UU ? GO:0042981 ... Q07820 24582986 BindingDB: IC50=500nM
    255015 4oq5:F (2.86) BS02 2UU ? GO:0042981 ... Q07820 24582986 BindingDB: IC50=500nM
    255016 4oq6:A (1.81) BS01 2UV ? GO:0042981 ... Q07820 24582986 MOAD: ic50=3.3uM
    BindingDB: IC50=3300nM
    255017 4oq6:B (1.81) BS01 2UV ? GO:0042981 ... Q07820 24582986 MOAD: ic50=3.3uM
    BindingDB: IC50=3300nM
    255018 4oq7:A (1.89) BS01 HEM 1.11.1.-
    1.11.1.5
    GO:0004601 ... B3LRE1 24950326
    255019 4oq8:A (1.45) BS01 rna ? GO:0005198 ... P17574 25195746
    255020 4oq8:A (1.45) BS02 rna ? GO:0005198 ... P17574 25195746
    255021 4oq8:A (1.45) BS03 rna ? GO:0005198 ... P17574 25195746
    255022 4oq9:A (1.45) BS01 rna ? GO:0005198 ... P17574 25195746
    255023 4oq9:A (1.45) BS02 rna ? GO:0005198 ... P17574 25195746
    255024 4oq9:A (1.45) BS03 rna ? GO:0005198 ... P17574 25195746
    255025 4oq9:A (1.45) BS04 rna ? GO:0005198 ... P17574 25195746
    255026 4oq9:B (1.45) BS01 rna ? GO:0005198 ... P17574 25195746
    255027 4oq9:B (1.45) BS02 rna ? GO:0005198 ... P17574 25195746
    255028 4oq9:B (1.45) BS03 rna ? GO:0005198 ... P17574 25195746
    255029 4oq9:C (1.45) BS01 rna ? GO:0005198 ... P17574 25195746
    255030 4oq9:C (1.45) BS02 rna ? GO:0005198 ... P17574 25195746
    255031 4oq9:C (1.45) BS03 rna ? GO:0005198 ... P17574 25195746
    255032 4oq9:D (1.45) BS01 rna ? GO:0005198 ... P17574 25195746
    255033 4oq9:D (1.45) BS02 rna ? GO:0005198 ... P17574 25195746
    255034 4oq9:D (1.45) BS03 rna ? GO:0005198 ... P17574 25195746
    255035 4oq9:D (1.45) BS04 rna ? GO:0005198 ... P17574 25195746
    255036 4oq9:E (1.45) BS01 rna ? GO:0005198 ... P17574 25195746
    255037 4oq9:E (1.45) BS02 rna ? GO:0005198 ... P17574 25195746
    255038 4oq9:E (1.45) BS03 rna ? GO:0005198 ... P17574 25195746
    255039 4oq9:E (1.45) BS04 rna ? GO:0005198 ... P17574 25195746
    255040 4oq9:E (1.45) BS05 rna ? GO:0005198 ... P17574 25195746
    255041 4oq9:E (1.45) BS06 rna ? GO:0005198 ... P17574 25195746
    255042 4oq9:F (1.45) BS01 rna ? GO:0005198 ... P17574 25195746
    255043 4oq9:F (1.45) BS02 rna ? GO:0005198 ... P17574 25195746
    255044 4oq9:F (1.45) BS03 rna ? GO:0005198 ... P17574 25195746
    255045 4oq9:F (1.45) BS04 rna ? GO:0005198 ... P17574 25195746
    255046 4oq9:F (1.45) BS05 rna ? GO:0005198 ... P17574 25195746
    255047 4oq9:F (1.45) BS06 rna ? GO:0005198 ... P17574 25195746
    255048 4oq9:G (1.45) BS01 rna ? GO:0005198 ... P17574 25195746
    255049 4oq9:G (1.45) BS02 rna ? GO:0005198 ... P17574 25195746
    255050 4oq9:G (1.45) BS03 rna ? GO:0005198 ... P17574 25195746
    255051 4oq9:H (1.45) BS01 rna ? GO:0005198 ... P17574 25195746
    255052 4oq9:H (1.45) BS02 rna ? GO:0005198 ... P17574 25195746
    255053 4oq9:H (1.45) BS03 rna ? GO:0005198 ... P17574 25195746
    255054 4oq9:I (1.45) BS01 rna ? GO:0005198 ... P17574 25195746
    255055 4oq9:I (1.45) BS02 rna ? GO:0005198 ... P17574 25195746
    255056 4oq9:I (1.45) BS03 rna ? GO:0005198 ... P17574 25195746
    255057 4oq9:I (1.45) BS04 rna ? GO:0005198 ... P17574 25195746
    255058 4oq9:J (1.45) BS01 rna ? GO:0005198 ... P17574 25195746
    255059 4oq9:J (1.45) BS02 rna ? GO:0005198 ... P17574 25195746
    255060 4oq9:J (1.45) BS03 rna ? GO:0005198 ... P17574 25195746
    255061 4oq9:J (1.45) BS04 rna ? GO:0005198 ... P17574 25195746
    255062 4oq9:J (1.45) BS05 rna ? GO:0005198 ... P17574 25195746
    255063 4oq9:J (1.45) BS06 rna ? GO:0005198 ... P17574 25195746
    255064 4oq9:J (1.45) BS07 rna ? GO:0005198 ... P17574 25195746
    255065 4oq9:K (1.45) BS01 rna ? GO:0005198 ... P17574 25195746
    255066 4oq9:K (1.45) BS02 rna ? GO:0005198 ... P17574 25195746
    255067 4oq9:K (1.45) BS03 rna ? GO:0005198 ... P17574 25195746
    255068 4oq9:K (1.45) BS04 rna ? GO:0005198 ... P17574 25195746
    255069 4oq9:K (1.45) BS05 rna ? GO:0005198 ... P17574 25195746
    255070 4oq9:K (1.45) BS06 rna ? GO:0005198 ... P17574 25195746
    255071 4oq9:L (1.45) BS01 rna ? GO:0005198 ... P17574 25195746
    255072 4oq9:L (1.45) BS02 rna ? GO:0005198 ... P17574 25195746
    255073 4oq9:L (1.45) BS03 rna ? GO:0005198 ... P17574 25195746
    255074 4oq9:M (1.45) BS01 rna ? GO:0005198 ... P17574 25195746
    255075 4oq9:M (1.45) BS02 rna ? GO:0005198 ... P17574 25195746
    255076 4oq9:M (1.45) BS03 rna ? GO:0005198 ... P17574 25195746
    255077 4oq9:N (1.45) BS01 rna ? GO:0005198 ... P17574 25195746
    255078 4oq9:N (1.45) BS02 rna ? GO:0005198 ... P17574 25195746
    255079 4oq9:N (1.45) BS03 rna ? GO:0005198 ... P17574 25195746
    255080 4oq9:O (1.45) BS01 rna ? GO:0005198 ... P17574 25195746
    255081 4oq9:O (1.45) BS02 rna ? GO:0005198 ... P17574 25195746
    255082 4oq9:O (1.45) BS03 rna ? GO:0005198 ... P17574 25195746
    255083 4oq9:O (1.45) BS04 rna ? GO:0005198 ... P17574 25195746
    255084 4oq9:O (1.45) BS05 rna ? GO:0005198 ... P17574 25195746
    255085 4oq9:O (1.45) BS06 rna ? GO:0005198 ... P17574 25195746
    255086 4oqa:A (3.65) BS01 dna 2.4.2.-
    2.4.2.30
    GO:0003677 ... P09874 24922587
    255087 4oqa:A (3.65) BS02 ZN 2.4.2.-
    2.4.2.30
    GO:0003677 ... P09874 24922587
    255088 4oqa:A (3.65) BS03 ZN 2.4.2.-
    2.4.2.30
    GO:0003677 ... P09874 24922587
    255089 4oqa:C (3.65) BS01 dna 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 24922587
    255090 4oqa:C (3.65) BS02 2US 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 24922587 BindingDB: IC50=753nM
    255091 4oqa:D (3.65) BS01 dna 2.4.2.-
    2.4.2.30
    GO:0003677 ... P09874 24922587
    255092 4oqa:D (3.65) BS02 ZN 2.4.2.-
    2.4.2.30
    GO:0003677 ... P09874 24922587
    255093 4oqa:D (3.65) BS03 ZN 2.4.2.-
    2.4.2.30
    GO:0003677 ... P09874 24922587
    255094 4oqa:F (3.65) BS01 dna 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 24922587
    255095 4oqb:A (3.362) BS01 dna 2.4.2.-
    2.4.2.30
    GO:0003677 ... P09874 24922587
    255096 4oqb:A (3.362) BS02 ZN 2.4.2.-
    2.4.2.30
    GO:0003677 ... P09874 24922587
    255097 4oqb:A (3.362) BS03 ZN 2.4.2.-
    2.4.2.30
    GO:0003677 ... P09874 24922587
    255098 4oqb:C (3.362) BS01 dna 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 24922587
    255099 4oqb:C (3.362) BS02 2UT 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 24922587 BindingDB: IC50=2070nM
    255100 4oqb:D (3.362) BS01 dna 2.4.2.-
    2.4.2.30
    GO:0003677 ... P09874 24922587
    255101 4oqb:D (3.362) BS02 ZN 2.4.2.-
    2.4.2.30
    GO:0003677 ... P09874 24922587
    255102 4oqb:D (3.362) BS03 ZN 2.4.2.-
    2.4.2.30
    GO:0003677 ... P09874 24922587
    255103 4oqb:F (3.362) BS01 dna 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 24922587
    255104 4oqc:A (1.3) BS01 AZI 1.7.3.3 GO:0004846 ... Q00511 25005084
    255105 4oqc:A (1.3) BS02 NA 1.7.3.3 GO:0004846 ... Q00511 25005084
    255106 4oqd:A (1.6) BS01 SAH 2.1.1.235 GO:0008168 ... P95748 24512254
    255107 4oqd:A (1.6) BS02 QDM 2.1.1.235 GO:0008168 ... P95748 24512254
    255108 4oqd:B (1.6) BS01 SAH 2.1.1.235 GO:0008168 ... P95748 24512254
    255109 4oqd:B (1.6) BS02 QDM 2.1.1.235 GO:0008168 ... P95748 24512254
    255110 4oqd:C (1.6) BS01 SAH 2.1.1.235 GO:0008168 ... P95748 24512254
    255111 4oqd:C (1.6) BS02 QDM 2.1.1.235 GO:0008168 ... P95748 24512254
    255112 4oqd:D (1.6) BS01 SAH 2.1.1.235 GO:0008168 ... P95748 24512254
    255113 4oqd:D (1.6) BS02 QDM 2.1.1.235 GO:0008168 ... P95748 24512254
    255114 4oqe:A (2.2) BS01 SAH 2.1.1.235 GO:0008168 ... P95748 24512254
    255115 4oqe:A (2.2) BS02 MMF 2.1.1.235 GO:0008168 ... P95748 24512254
    255116 4oqe:B (2.2) BS01 SAH 2.1.1.235 GO:0008168 ... P95748 24512254
    255117 4oqe:B (2.2) BS02 MMF 2.1.1.235 GO:0008168 ... P95748 24512254
    255118 4oqg:A (2.4) BS01 2UL 3.5.2.6 GO:0008800 ... Q79DR3 26004540
    255119 4oqg:B (2.4) BS01 2UL 3.5.2.6 GO:0008800 ... Q79DR3 26004540
    255120 4oqg:C (2.4) BS01 2UL 3.5.2.6 GO:0008800 ... Q79DR3 26004540
    255121 4oqg:D (2.4) BS01 2UL 3.5.2.6 GO:0008800 ... Q79DR3 26004540
    255122 4oqg:F (2.4) BS01 2UL 3.5.2.6 GO:0008800 ... Q79DR3 26004540
    255123 4oqh:A (1.7) BS01 2UL 3.5.2.6 GO:0008800 ... Q9AGJ5 26004540
    255124 4oql:A (2.1) BS01 F2U 2.7.1.21 GO:0004797 ... P0DTH5 N/A
    255125 4oql:B (2.1) BS01 F2U 2.7.1.21 GO:0004797 ... P0DTH5 N/A
    255126 4oqm:A (2.2) BS01 FDU 2.7.1.21 GO:0004797 ... P0DTH5 N/A
    255127 4oqm:B (2.2) BS01 FDU 2.7.1.21 GO:0004797 ... P0DTH5 N/A
    255128 4oqn:A (2.3) BS01 EDU 2.7.1.21 GO:0004797 ... P0DTH5 N/A
    255129 4oqn:B (2.3) BS01 EDU 2.7.1.21 GO:0004797 ... P0DTH5 N/A
    255130 4oqp:A (1.6) BS01 PED ? GO:0030246 ... P39140 24863636
    255131 4oqr:A (1.81) BS01 HEM ? GO:0004497 ... W5VH56 25691737
    255132 4oqr:A (1.81) BS02 2UO ? GO:0004497 ... W5VH56 25691737 MOAD: Kd=29.3uM
    255133 4oqs:A (2.04) BS01 HEM ? GO:0004497 ... W5VH56 25691737
    255134 4oqv:A (1.23) BS01 FMN 1.3.5.2 GO:0004152 ... Q02127 24801997
    255135 4oqv:A (1.23) BS02 2V6 1.3.5.2 GO:0004152 ... Q02127 24801997 MOAD: ic50=1.6uM
    BindingDB: IC50=1600nM
    255136 4oqx:A (2.5) BS01 EDV 2.7.1.21 GO:0004797 ... P0DTH5 N/A
    255137 4oqx:B (2.5) BS01 EDV 2.7.1.21 GO:0004797 ... P0DTH5 N/A
    255138 4oqy:A (1.9) BS01 NDP ? GO:0016491 ... M4ZS15 N/A
    255139 4or0:A (2.58) BS01 NPS ? GO:0003677 ... P02769 24753230
    255140 4or0:A (2.58) BS02 NPS ? GO:0003677 ... P02769 24753230
    255141 4or0:A (2.58) BS03 NPS ? GO:0003677 ... P02769 24753230
    255142 4or0:B (2.58) BS01 NPS ? GO:0003677 ... P02769 24753230
    255143 4or0:B (2.58) BS02 NPS ? GO:0003677 ... P02769 24753230
    255144 4or0:B (2.58) BS03 NPS ? GO:0003677 ... P02769 24753230
    255145 4or2:A (2.8) BS01 FM9 ? GO:0004930 ... P0ABE7
    Q13255
    24603153
    255146 4or2:A (2.8) BS02 CLR ? GO:0004930 ... P0ABE7
    Q13255
    24603153
    255147 4or2:A (2.8) BS03 CLR ? GO:0004930 ... P0ABE7
    Q13255
    24603153
    255148 4or2:A (2.8) BS04 CLR ? GO:0004930 ... P0ABE7
    Q13255
    24603153
    255149 4or2:A (2.8) BS05 CLR ? GO:0004930 ... P0ABE7
    Q13255
    24603153
    255150 4or2:B (2.8) BS01 CLR ? GO:0004930 ... P0ABE7
    Q13255
    24603153
    255151 4or2:B (2.8) BS02 FM9 ? GO:0004930 ... P0ABE7
    Q13255
    24603153
    255152 4or2:B (2.8) BS03 CLR ? GO:0004930 ... P0ABE7
    Q13255
    24603153
    255153 4or2:B (2.8) BS04 CLR ? GO:0004930 ... P0ABE7
    Q13255
    24603153
    255154 4or4:A (2.21) BS01 M7G ? GO:0033650 ... A0A0J9X1Y8 25691568
    255155 4or4:B (2.21) BS01 M7G ? GO:0033650 ... A0A0J9X1Y8 25691568
    255156 4or5:C (2.9) BS01 ZN ? GO:0001070 ... P04608 24727379
    255157 4or5:C (2.9) BS02 ZN ? GO:0001070 ... P04608 24727379
    255158 4or5:H (2.9) BS01 ZN ? GO:0001070 ... P04608 24727379
    255159 4or5:H (2.9) BS02 ZN ? GO:0001070 ... P04608 24727379
    255160 4or6:A (2.293) BS01 GDP ? GO:0033650 ... A0A0J9X1Y8 25691568
    255161 4or6:B (2.293) BS01 GDP ? GO:0033650 ... A0A0J9X1Y8 25691568
    255162 4or7:A (1.76) BS01 NAP N/A GO:0004146 ... N/A 25288083
    255163 4or7:A (1.76) BS02 25U N/A GO:0004146 ... N/A 25288083 MOAD: ic50=23nM
    255164 4or9:A (2.23) BS01 FE 3.1.3.16 GO:0004722 ... P16298 N/A
    255165 4or9:A (2.23) BS02 ZN 3.1.3.16 GO:0004722 ... P16298 N/A
    255166 4or9:B (2.23) BS01 CA ? GO:0004721 ... P63098 N/A
    255167 4or9:B (2.23) BS02 CA ? GO:0004721 ... P63098 N/A
    255168 4or9:B (2.23) BS03 CA ? GO:0004721 ... P63098 N/A
    255169 4or9:B (2.23) BS04 CA ? GO:0004721 ... P63098 N/A
    255170 4ora:A (2.747) BS01 FE 3.1.3.16 GO:0004722 ... P16298 N/A
    255171 4ora:B (2.747) BS01 CA ? GO:0004721 ... P63098 N/A
    255172 4ora:B (2.747) BS02 CA ? GO:0004721 ... P63098 N/A
    255173 4ora:B (2.747) BS03 CA ? GO:0004721 ... P63098 N/A
    255174 4ora:B (2.747) BS04 CA ? GO:0004721 ... P63098 N/A
    255175 4orb:A (3.108) BS01 ZN 3.1.3.16 GO:0000082 ... P63328 N/A
    255176 4orb:A (3.108) BS02 FE 3.1.3.16 GO:0000082 ... P63328 N/A
    255177 4orb:B (3.108) BS01 CA ? GO:0001569 ... Q63810 N/A
    255178 4orb:B (3.108) BS02 CA ? GO:0001569 ... Q63810 N/A
    255179 4orb:B (3.108) BS03 CA ? GO:0001569 ... Q63810 N/A
    255180 4orb:B (3.108) BS04 CA ? GO:0001569 ... Q63810 N/A
    255181 4orc:A (2.7) BS01 ZN 3.1.3.16 GO:0004722 ... P16298 N/A
    255182 4orc:A (2.7) BS02 FE 3.1.3.16 GO:0004722 ... P16298 N/A
    255183 4orc:B (2.7) BS01 CA ? GO:0004721 ... P63098 N/A
    255184 4orc:B (2.7) BS02 CA ? GO:0004721 ... P63098 N/A
    255185 4orc:B (2.7) BS03 CA ? GO:0004721 ... P63098 N/A
    255186 4orc:B (2.7) BS04 CA ? GO:0004721 ... P63098 N/A
    255187 4ore:X (2.2) BS01 peptide 2.5.1.47 GO:0003824 ... P45040 N/A
    255188 4ore:X (2.2) BS02 OAS 2.5.1.47 GO:0003824 ... P45040 N/A
    255189 4orh:C (4.802) BS01 ZN 2.3.2.27 N/A O76064 22589545
    255190 4orh:C (4.802) BS02 ZN 2.3.2.27 N/A O76064 22589545
    255191 4orh:G (4.802) BS01 ZN 2.3.2.27 N/A O76064 22589545
    255192 4orh:G (4.802) BS02 ZN 2.3.2.27 N/A O76064 22589545
    255193 4orh:H (4.802) BS01 ZN 2.3.2.27 N/A O76064 22589545
    255194 4orh:H (4.802) BS02 ZN 2.3.2.27 N/A O76064 22589545
    255195 4orh:K (4.802) BS01 ZN 2.3.2.27 N/A O76064 22589545
    255196 4orh:K (4.802) BS02 ZN 2.3.2.27 N/A O76064 22589545
    255197 4orh:L (4.802) BS01 ZN 2.3.2.27 N/A O76064 22589545
    255198 4orh:L (4.802) BS02 ZN 2.3.2.27 N/A O76064 22589545
    255199 4ori:A (1.5) BS01 FMN 1.3.5.2 GO:0004152 ... Q63707 24801997
    255200 4ori:A (1.5) BS02 2V6 1.3.5.2 GO:0004152 ... Q63707 24801997 MOAD: ic50=0.088uM
    BindingDB: IC50=49nM

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).