SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    255401 4ou2:D (2.15) BS01 NAD ? GO:0016491 ... Q83V33 25565451
    255402 4ou2:D (2.15) BS02 6OA ? GO:0016491 ... Q83V33 25565451
    255403 4ou3:A (1.95) BS01 peptide 3.4.11.2 GO:0002003 ... P15145 25359769
    255404 4ou3:A (1.95) BS02 ZN 3.4.11.2 GO:0002003 ... P15145 25359769
    255405 4ou4:A (2.4) BS01 S2T 3.1.1.1 GO:0016787 ... L7PYQ2 24680822
    255406 4ou6:A (1.96) BS01 dna ? N/A P0A8J2 25053836
    255407 4ou6:B (1.96) BS01 dna ? N/A P0A8J2 25053836
    255408 4ou6:C (1.96) BS01 dna ? N/A P0A8J2 25053836
    255409 4ou6:D (1.96) BS01 dna ? N/A P0A8J2 25053836
    255410 4ou6:E (1.96) BS01 dna ? N/A P0A8J2 25053836
    255411 4ou7:A (2.83) BS01 dna ? N/A P0A8J2 25053836
    255412 4ou7:B (2.83) BS01 dna ? N/A P0A8J2 25053836
    255413 4ou7:C (2.83) BS01 dna ? N/A P0A8J2 25053836
    255414 4ou7:D (2.83) BS01 dna ? N/A P0A8J2 25053836
    255415 4ou7:E (2.83) BS01 dna ? N/A P0A8J2 25053836
    255416 4ou8:A (2.8) BS01 FE2 1.13.11.75 GO:0010436 ... P74334 24648526
    255417 4ou8:B (2.8) BS01 FE2 1.13.11.75 GO:0010436 ... P74334 24648526
    255418 4ou8:C (2.8) BS01 FE2 1.13.11.75 GO:0010436 ... P74334 24648526
    255419 4ou8:D (2.8) BS01 FE2 1.13.11.75 GO:0010436 ... P74334 24648526
    255420 4ou9:A (2.0) BS01 FE2 1.13.11.75 GO:0010436 ... P74334 24648526
    255421 4ou9:B (2.0) BS01 FE2 1.13.11.75 GO:0010436 ... P74334 24648526
    255422 4ou9:C (2.0) BS01 FE2 1.13.11.75 GO:0010436 ... P74334 24648526
    255423 4ou9:D (2.0) BS01 FE2 1.13.11.75 GO:0010436 ... P74334 24648526
    255424 4oua:A (2.763) BS01 CU1 N/A GO:0016491 ... N/A 25195745
    255425 4oua:A (2.763) BS02 CU1 N/A GO:0016491 ... N/A 25195745
    255426 4oua:A (2.763) BS03 TEW N/A GO:0016491 ... N/A 25195745
    255427 4oua:B (2.763) BS01 CU1 N/A GO:0004503 ... N/A 25195745
    255428 4oua:B (2.763) BS02 CU1 N/A GO:0004503 ... N/A 25195745
    255429 4oua:B (2.763) BS03 TEW N/A GO:0004503 ... N/A 25195745
    255430 4oub:A (2.19) BS01 NAD ? GO:0016491 ... Q83V33 25565451
    255431 4oub:A (2.19) BS02 2VS ? GO:0016491 ... Q83V33 25565451
    255432 4oub:B (2.19) BS01 NAD ? GO:0016491 ... Q83V33 25565451
    255433 4oub:B (2.19) BS02 2VS ? GO:0016491 ... Q83V33 25565451
    255434 4oub:C (2.19) BS01 NAD ? GO:0016491 ... Q83V33 25565451
    255435 4oub:C (2.19) BS02 2VS ? GO:0016491 ... Q83V33 25565451
    255436 4oub:D (2.19) BS01 NAD ? GO:0016491 ... Q83V33 25565451
    255437 4oub:D (2.19) BS02 2VS ? GO:0016491 ... Q83V33 25565451
    255438 4ouc:A (1.9) BS01 peptide 2.7.11.1 GO:0004672 ... Q8TF76 24732914
    255439 4ouc:A (1.9) BS02 5ID 2.7.11.1 GO:0004672 ... Q8TF76 24732914
    255440 4oud:A (2.65) BS01 TYR 6.1.1.1 GO:0000166 ... A0A0H2UKY9 25607366
    255441 4oue:A (2.35) BS01 IPT 3.2.1.111 GO:0004560 ... Q8A5P6 24527659
    255442 4oue:B (2.35) BS01 IPT 3.2.1.111 GO:0004560 ... Q8A5P6 24527659
    255443 4oug:C (2.46) BS01 LP5 ? GO:0001818 ... Q9GK12 N/A
    255444 4oug:D (2.46) BS01 LP5 ? GO:0001818 ... Q9GK12 N/A
    255445 4oui:A (2.17) BS01 ZN N/A GO:0004553 ... N/A 24810719
    255446 4oui:A (2.17) BS02 MG N/A GO:0004553 ... N/A 24810719
    255447 4oui:B (2.17) BS01 ZN N/A GO:0004553 ... N/A 24810719
    255448 4oui:B (2.17) BS02 MG N/A GO:0004553 ... N/A 24810719
    255449 4ouj:A (1.46) BS01 GAL ? N/A B1INP8 24631690
    255450 4ouj:B (1.46) BS01 GAL ? N/A B1INP8 24631690
    255451 4ouk:X (2.0) BS01 C63 ? N/A B2CZF4 N/A
    255452 4our:A (3.4) BS01 O6E ? GO:0006355 ... P14713 24982198
    255453 4our:B (3.4) BS01 O6E ? GO:0006355 ... P14713 24982198
    255454 4ov0:A (2.0) BS01 RET ? GO:0005216 ... P02945 25192977
    255455 4ov1:A (2.306) BS01 F3S ? N/A Q2ITY5 24816113
    255456 4ov2:A (2.6) BS01 CA ? GO:0000287 ... P62168 N/A
    255457 4ov2:A (2.6) BS02 CA ? GO:0000287 ... P62168 N/A
    255458 4ov2:A (2.6) BS03 CA ? GO:0000287 ... P62168 N/A
    255459 4ov2:B (2.6) BS01 CA ? GO:0000287 ... P62168 N/A
    255460 4ov2:B (2.6) BS02 CA ? GO:0000287 ... P62168 N/A
    255461 4ov2:B (2.6) BS03 CA ? GO:0000287 ... P62168 N/A
    255462 4ov2:C (2.6) BS01 CA ? GO:0000287 ... P62168 N/A
    255463 4ov2:C (2.6) BS02 CA ? GO:0000287 ... P62168 N/A
    255464 4ov2:C (2.6) BS03 CA ? GO:0000287 ... P62168 N/A
    255465 4ov2:D (2.6) BS01 CA ? GO:0000287 ... P62168 N/A
    255466 4ov2:D (2.6) BS02 CA ? GO:0000287 ... P62168 N/A
    255467 4ov2:D (2.6) BS03 CA ? GO:0000287 ... P62168 N/A
    255468 4ov4:A (2.0) BS01 ZN 2.3.3.13 GO:0003824 ... B0SN40 25128527
    255469 4ov4:A (2.0) BS02 KIV 2.3.3.13 GO:0003824 ... B0SN40 25128527
    255470 4ov5:A (2.199) BS01 peptide ? GO:0006955 ... P01903 25002586
    255471 4ov5:B (2.199) BS01 peptide ? GO:0006955 ... P01911 25002586
    255472 4ov5:D (2.199) BS01 peptide ? GO:0006955 ... P01903 25002586
    255473 4ov5:E (2.199) BS01 peptide ? GO:0006955 ... P01911 25002586
    255474 4ov5:G (2.199) BS01 peptide ? GO:0006955 ... P01903 25002586
    255475 4ov5:H (2.199) BS01 peptide ? GO:0006955 ... P01911 25002586
    255476 4ov5:J (2.199) BS01 peptide ? GO:0006955 ... P01903 25002586
    255477 4ov5:K (2.199) BS01 peptide ? GO:0006955 ... P01911 25002586
    255478 4ov5:M (2.199) BS01 peptide ? GO:0006955 ... P01903 25002586
    255479 4ov5:N (2.199) BS01 peptide ? GO:0006955 ... P01911 25002586
    255480 4ov5:P (2.199) BS01 peptide ? GO:0006955 ... P01903 25002586
    255481 4ov5:Q (2.199) BS01 peptide ? GO:0006955 ... P01911 25002586
    255482 4ov7:A (2.701) BS01 dna N/A GO:0003700 ... N/A 25259920
    255483 4ov7:A (2.701) BS02 dna N/A GO:0003700 ... N/A 25259920
    255484 4ov7:A (2.701) BS03 ZN N/A GO:0003700 ... N/A 25259920
    255485 4ov7:A (2.701) BS04 ZN N/A GO:0003700 ... N/A 25259920
    255486 4ov7:B (2.701) BS01 dna N/A GO:0003700 ... N/A 25259920
    255487 4ov7:B (2.701) BS02 dna N/A GO:0003700 ... N/A 25259920
    255488 4ov7:B (2.701) BS03 ZN N/A GO:0003700 ... N/A 25259920
    255489 4ov7:B (2.701) BS04 ZN N/A GO:0003700 ... N/A 25259920
    255490 4ov7:E (2.701) BS01 dna N/A GO:0003700 ... N/A 25259920
    255491 4ov7:E (2.701) BS02 dna N/A GO:0003700 ... N/A 25259920
    255492 4ov7:E (2.701) BS03 ZN N/A GO:0003700 ... N/A 25259920
    255493 4ov7:E (2.701) BS04 ZN N/A GO:0003700 ... N/A 25259920
    255494 4ov7:F (2.701) BS01 dna N/A GO:0003700 ... N/A 25259920
    255495 4ov7:F (2.701) BS02 dna N/A GO:0003700 ... N/A 25259920
    255496 4ov7:F (2.701) BS03 ZN N/A GO:0003700 ... N/A 25259920
    255497 4ov7:F (2.701) BS04 ZN N/A GO:0003700 ... N/A 25259920
    255498 4ov9:A (2.2) BS01 ZN 2.3.3.13 GO:0003824 ... B0SN40 25128527
    255499 4ov9:A (2.2) BS02 VPM 2.3.3.13 GO:0003824 ... B0SN40 25128527
    255500 4ovd:A (2.0) BS01 CA 2.4.1.129 GO:0005886 ... C8W9X3 N/A
    255501 4ove:A (2.64) BS01 CA ? N/A O09118 26859457
    255502 4ovf:A (2.05) BS01 CA N/A GO:0003677 ... N/A 25970224
    255503 4ovf:A (2.05) BS02 2VG N/A GO:0003677 ... N/A 25970224
    255504 4ovf:B (2.05) BS01 CA N/A GO:0003677 ... N/A 25970224
    255505 4ovf:B (2.05) BS02 CA N/A GO:0003677 ... N/A 25970224
    255506 4ovf:B (2.05) BS03 2VG N/A GO:0003677 ... N/A 25970224
    255507 4ovg:A (1.9) BS01 2VF N/A GO:0003677 ... N/A 25970224
    255508 4ovg:B (1.9) BS01 2VF N/A GO:0003677 ... N/A 25970224
    255509 4ovh:A (2.25) BS01 2VE N/A GO:0003677 ... N/A 25970224
    255510 4ovi:A (1.87) BS01 FAD 1.14.13.92 GO:0004499 ... Q47PU3 24443704
    255511 4ovi:A (1.87) BS02 N01 1.14.13.92 GO:0004499 ... Q47PU3 24443704
    255512 4ovl:A (1.7) BS01 1TD 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P12497 24532034
    255513 4ovl:A (1.7) BS02 1TD 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P12497 24532034
    255514 4ovl:B (1.7) BS01 1TD 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P12497 24532034
    255515 4ovl:B (1.7) BS02 1TD 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P12497 24532034
    255516 4ovn:A (2.8) BS01 MG ? GO:0000922 ... P0DP23 25370050
    255517 4ovn:A (2.8) BS02 MG ? GO:0000922 ... P0DP23 25370050
    255518 4ovn:A (2.8) BS03 MG ? GO:0000922 ... P0DP23 25370050
    255519 4ovn:A (2.8) BS04 MG ? GO:0000922 ... P0DP23 25370050
    255520 4ovn:B (2.8) BS01 MG ? GO:0000922 ... P0DP23 25370050
    255521 4ovn:B (2.8) BS02 MG ? GO:0000922 ... P0DP23 25370050
    255522 4ovn:B (2.8) BS03 MG ? GO:0000922 ... P0DP23 25370050
    255523 4ovn:C (2.8) BS01 MG ? GO:0000922 ... P0DP23 25370050
    255524 4ovn:C (2.8) BS02 MG ? GO:0000922 ... P0DP23 25370050
    255525 4ovn:C (2.8) BS03 MG ? GO:0000922 ... P0DP23 25370050
    255526 4ovn:D (2.8) BS01 MG ? GO:0000922 ... P0DP23 25370050
    255527 4ovn:D (2.8) BS02 MG ? GO:0000922 ... P0DP23 25370050
    255528 4ovn:D (2.8) BS03 MG ? GO:0000922 ... P0DP23 25370050
    255529 4ovn:E (2.8) BS01 MG ? GO:0000922 ... P0DP23 25370050
    255530 4ovn:E (2.8) BS02 MG ? GO:0000922 ... P0DP23 25370050
    255531 4ovp:A (1.7) BS01 MAV ? GO:0030288 ... A3T0D1 25540822
    255532 4ovp:B (1.7) BS01 MAV ? GO:0030288 ... A3T0D1 25540822
    255533 4ovq:A (1.501) BS01 BDP ? GO:0030246 ... Q160Z9 25540822
    255534 4ovr:A (1.65) BS01 GTR ? GO:0030246 ... A7IKQ4 25540822
    255535 4ovr:B (1.65) BS01 GTR ? GO:0030246 ... A7IKQ4 25540822
    255536 4ovt:A (1.8) BS01 LFC ? GO:0030288 ... A6X5V3 25540822
    255537 4ovt:B (1.8) BS01 LFC ? GO:0030288 ... A6X5V3 25540822
    255538 4ovv:A (3.5) BS01 PBU 2.7.11.1
    2.7.1.137
    2.7.1.153
    GO:0001944 ... P42336 25105564
    255539 4ovw:A (2.3) BS01 IN1 3.2.1.4 GO:0004553 ... P46237 9153432
    255540 4ovw:B (2.3) BS01 IN1 3.2.1.4 GO:0004553 ... P46237 9153432
    255541 4ovy:A (1.8) BS01 CA ? N/A D5SUM3 N/A
    255542 4ovz:A (2.5) BS01 P85 2.7.7.50
    3.4.19.12
    3.4.22.-
    3.4.22.69
    GO:0006508 ... P0C6U8 24568342 MOAD: ic50=0.49uM
    BindingDB: IC50=490nM
    255543 4ovz:A (2.5) BS02 P85 2.7.7.50
    3.4.19.12
    3.4.22.-
    3.4.22.69
    GO:0006508 ... P0C6U8 24568342 MOAD: ic50=0.49uM
    BindingDB: IC50=490nM
    255544 4ovz:B (2.5) BS01 P85 2.7.7.50
    3.4.19.12
    3.4.22.-
    3.4.22.69
    GO:0006508 ... P0C6U8 24568342 MOAD: ic50=0.49uM
    BindingDB: IC50=490nM
    255545 4ovz:B (2.5) BS02 P85 2.7.7.50
    3.4.19.12
    3.4.22.-
    3.4.22.69
    GO:0006508 ... P0C6U8 24568342 MOAD: ic50=0.49uM
    BindingDB: IC50=490nM
    255546 4ow0:A (2.1) BS01 S88 2.7.7.50
    3.4.19.12
    3.4.22.-
    3.4.22.69
    GO:0006508 ... P0C6U8 24568342 MOAD: ic50=0.15uM
    BindingDB: IC50=150nM
    255547 4ow0:A (2.1) BS02 S88 2.7.7.50
    3.4.19.12
    3.4.22.-
    3.4.22.69
    GO:0006508 ... P0C6U8 24568342 MOAD: ic50=0.15uM
    BindingDB: IC50=150nM
    255548 4ow0:B (2.1) BS01 S88 2.7.7.50
    3.4.19.12
    3.4.22.-
    3.4.22.69
    GO:0006508 ... P0C6U8 24568342 MOAD: ic50=0.15uM
    BindingDB: IC50=150nM
    255549 4ow0:B (2.1) BS02 S88 2.7.7.50
    3.4.19.12
    3.4.22.-
    3.4.22.69
    GO:0006508 ... P0C6U8 24568342 MOAD: ic50=0.15uM
    BindingDB: IC50=150nM
    255550 4ow3:A (2.1) BS01 ZN 3.4.24.27 GO:0004222 ... P00800 24633409
    255551 4ow3:A (2.1) BS02 CA 3.4.24.27 GO:0004222 ... P00800 24633409
    255552 4ow3:A (2.1) BS03 CA 3.4.24.27 GO:0004222 ... P00800 24633409
    255553 4ow3:A (2.1) BS04 CA 3.4.24.27 GO:0004222 ... P00800 24633409
    255554 4ow3:A (2.1) BS05 CA 3.4.24.27 GO:0004222 ... P00800 24633409
    255555 4owb:A (1.69) BS01 NA 3.2.1.17 GO:0003796 ... P00698 25195879
    255556 4owb:A (1.69) BS02 BR 3.2.1.17 GO:0003796 ... P00698 25195879
    255557 4owb:A (1.69) BS03 BR 3.2.1.17 GO:0003796 ... P00698 25195879
    255558 4owb:A (1.69) BS04 BR 3.2.1.17 GO:0003796 ... P00698 25195879
    255559 4owb:A (1.69) BS05 BR 3.2.1.17 GO:0003796 ... P00698 25195879
    255560 4owd:A (2.21) BS01 CYS 4.2.2.n1 GO:0000270 ... Q9HXN1 N/A
    255561 4owf:A (2.0) BS01 peptide 6.3.2.- N/A O88522 24469399
    255562 4owf:B (2.0) BS01 peptide 6.3.2.- N/A O88522 24469399
    255563 4owg:A (1.55) BS01 PEP 4.2.3.3
    5.3.1.1
    GO:0004807 ... P00939 N/A
    255564 4owg:B (1.55) BS01 PEP 4.2.3.3
    5.3.1.1
    GO:0004807 ... P00939 N/A
    255565 4owh:A (1.484) BS01 6BP 3.2.1.17 GO:0003796 ... P00698 25195880
    255566 4owj:A (2.0) BS01 GOL ? N/A P19247 24862282
    255567 4owj:A (2.0) BS02 GOL ? N/A P19247 24862282
    255568 4owj:B (2.0) BS01 GOL ? N/A P19247 24862282
    255569 4owj:B (2.0) BS02 GOL ? N/A P19247 24862282
    255570 4owj:C (2.0) BS01 GOL ? N/A P19247 24862282
    255571 4owj:C (2.0) BS02 GOL ? N/A P19247 24862282
    255572 4owj:D (2.0) BS01 GOL ? N/A P19247 24862282
    255573 4owj:D (2.0) BS02 GOL ? N/A P19247 24862282
    255574 4owj:E (2.0) BS01 GOL ? N/A P19247 24862282
    255575 4owj:E (2.0) BS02 GOL ? N/A P19247 24862282
    255576 4owj:F (2.0) BS01 GOL ? N/A P19247 24862282
    255577 4owj:F (2.0) BS02 GOL ? N/A P19247 24862282
    255578 4owj:G (2.0) BS01 GOL ? N/A P19247 24862282
    255579 4owj:G (2.0) BS02 GOL ? N/A P19247 24862282
    255580 4owk:A (2.0) BS01 NGA ? N/A P19247 24862282 MOAD: Kd=131uM
    255581 4owk:A (2.0) BS02 GOL ? N/A P19247 24862282
    255582 4owk:B (2.0) BS01 NGA ? N/A P19247 24862282 MOAD: Kd=131uM
    255583 4owk:C (2.0) BS01 NGA ? N/A P19247 24862282 MOAD: Kd=131uM
    255584 4owk:C (2.0) BS02 GOL ? N/A P19247 24862282
    255585 4owk:D (2.0) BS01 NGA ? N/A P19247 24862282 MOAD: Kd=131uM
    255586 4owk:D (2.0) BS02 GOL ? N/A P19247 24862282
    255587 4owk:E (2.0) BS01 NGA ? N/A P19247 24862282 MOAD: Kd=131uM
    255588 4owk:E (2.0) BS02 GOL ? N/A P19247 24862282
    255589 4owk:F (2.0) BS01 NGA ? N/A P19247 24862282 MOAD: Kd=131uM
    255590 4owk:F (2.0) BS02 GOL ? N/A P19247 24862282
    255591 4owk:G (2.0) BS01 NGA ? N/A P19247 24862282 MOAD: Kd=131uM
    255592 4owk:G (2.0) BS02 GOL ? N/A P19247 24862282
    255593 4owl:A (2.1) BS01 GOL ? N/A P19247 24862282
    255594 4owl:B (2.1) BS01 GAL ? N/A P19247 24862282
    255595 4owl:C (2.1) BS01 GAL ? N/A P19247 24862282
    255596 4owl:C (2.1) BS02 GOL ? N/A P19247 24862282
    255597 4owl:D (2.1) BS01 GAL ? N/A P19247 24862282
    255598 4owl:D (2.1) BS02 GOL ? N/A P19247 24862282
    255599 4owl:E (2.1) BS01 GAL ? N/A P19247 24862282
    255600 4owl:E (2.1) BS02 GOL ? N/A P19247 24862282

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).