SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    256001 4p16:A (2.5) BS01 ZN 2.1.1.57
    3.4.19.12
    3.6.4.12
    3.6.4.13
    GO:0006508 ... K0BWD0 24992731
    256002 4p1b:A (2.05) BS01 FE 1.14.13.236 GO:0016491 ... Q00456 25248368
    256003 4p1b:A (2.05) BS02 FE 1.14.13.236 GO:0016491 ... Q00456 25248368
    256004 4p1b:D (2.05) BS01 FE 1.14.13.236 GO:0016491 ... Q00456 25248368
    256005 4p1b:D (2.05) BS02 FE 1.14.13.236 GO:0016491 ... Q00456 25248368
    256006 4p1b:H (2.05) BS01 FES ? GO:0042203 ... Q00458 25248368
    256007 4p1b:I (2.05) BS01 FES ? GO:0042203 ... Q00458 25248368
    256008 4p1c:A (2.4) BS01 FE 1.14.13.236 GO:0016491 ... Q00456 25248368
    256009 4p1c:A (2.4) BS02 FE 1.14.13.236 GO:0016491 ... Q00456 25248368
    256010 4p1c:D (2.4) BS01 FE 1.14.13.236 GO:0016491 ... Q00456 25248368
    256011 4p1c:D (2.4) BS02 FE 1.14.13.236 GO:0016491 ... Q00456 25248368
    256012 4p1c:H (2.4) BS01 FES ? GO:0042203 ... Q00458 25248368
    256013 4p1c:I (2.4) BS01 FES ? GO:0042203 ... Q00458 25248368
    256014 4p1g:A (2.603) BS01 AMP ? GO:0010960 ... Q3TWN3 N/A
    256015 4p1l:A (1.7) BS01 BDP ? GO:0030246 ... Q1QUN2 25540822
    256016 4p1l:B (1.7) BS01 BDP ? GO:0030246 ... Q1QUN2 25540822
    256017 4p1o:A (3.06) BS01 ATP ? GO:0010960 ... Q3TWN3 N/A
    256018 4p1o:B (3.06) BS01 ATP ? GO:0010960 ... Q3TWN3 N/A
    256019 4p1r:A (2.243) BS01 ZN 3.1.4.17 GO:0004114 ... Q9Y233 24944747
    256020 4p1r:A (2.243) BS02 2KR 3.1.4.17 GO:0004114 ... Q9Y233 24944747 MOAD: ic50=4.1nM
    BindingDB: IC50=4.1nM
    256021 4p1r:B (2.243) BS01 ZN 3.1.4.17 GO:0004114 ... Q9Y233 24944747
    256022 4p1r:B (2.243) BS02 2KR 3.1.4.17 GO:0004114 ... Q9Y233 24944747 MOAD: ic50=4.1nM
    BindingDB: IC50=4.1nM
    256023 4p1u:A (2.52) BS01 21G ? N/A P31345 25019388
    256024 4p1v:A (1.5497) BS01 GAL ? N/A G8FL04 24648450
    256025 4p1v:A (1.5497) BS02 FUC ? N/A G8FL04 24648450
    256026 4p1v:B (1.5497) BS01 GAL ? N/A G8FL04 24648450
    256027 4p1v:B (1.5497) BS02 FUC ? N/A G8FL04 24648450
    256028 4p1v:C (1.5497) BS01 GAL ? N/A G8FL04 24648450
    256029 4p1v:C (1.5497) BS02 FUC ? N/A G8FL04 24648450
    256030 4p1v:D (1.5497) BS01 GAL ? N/A G8FL04 24648450
    256031 4p1v:D (1.5497) BS02 FUC ? N/A G8FL04 24648450
    256032 4p1w:C (3.2) BS01 peptide ? GO:0000045 ... C5DFJ6 24793651
    256033 4p25:A (1.4991) BS01 GAL ? N/A G8FL04 24648450
    256034 4p25:A (1.4991) BS02 FUC ? N/A G8FL04 24648450
    256035 4p25:B (1.4991) BS01 GAL ? N/A G8FL04 24648450
    256036 4p25:B (1.4991) BS02 FUC ? N/A G8FL04 24648450
    256037 4p25:C (1.4991) BS01 GAL ? N/A G8FL04 24648450
    256038 4p25:C (1.4991) BS02 FUC ? N/A G8FL04 24648450
    256039 4p25:D (1.4991) BS01 FUC ? N/A G8FL04 24648450
    256040 4p25:D (1.4991) BS02 GAL ? N/A G8FL04 24648450
    256041 4p25:D (1.4991) BS03 FUC ? N/A G8FL04 24648450
    256042 4p2h:A (1.987) BS01 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 24966350
    256043 4p2h:A (1.987) BS02 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 24966350
    256044 4p2h:A (1.987) BS03 dna 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 24966350
    256045 4p2h:A (1.987) BS04 MN 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 24966350
    256046 4p2h:A (1.987) BS05 MN 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 24966350
    256047 4p2h:A (1.987) BS06 1FZ 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0003677 ... P06746 24966350
    256048 4p2l:A (2.9) BS01 FAD 1.8.3.2 GO:0016971 ... Q6IUU3 24888638
    256049 4p2l:B (2.9) BS01 FAD 1.8.3.2 GO:0016971 ... Q6IUU3 24888638
    256050 4p2n:A (1.7) BS01 GAL ? N/A G8FL04 24648450
    256051 4p2n:A (1.7) BS02 FUC ? N/A G8FL04 24648450
    256052 4p2n:B (1.7) BS01 FUC ? N/A G8FL04 24648450
    256053 4p2n:B (1.7) BS02 GAL ? N/A G8FL04 24648450
    256054 4p2n:C (1.7) BS01 GAL ? N/A G8FL04 24648450
    256055 4p2n:D (1.7) BS01 GAL ? N/A G8FL04 24648450
    256056 4p2o:A (2.603) BS01 peptide ? GO:0006955 ... P04224 24855945
    256057 4p2o:B (2.603) BS01 peptide ? GO:0006955 ... Q31163 24855945
    256058 4p2o:C (2.603) BS01 peptide N/A N/A N/A 24855945
    256059 4p2o:D (2.603) BS01 peptide N/A N/A N/A 24855945
    256060 4p2p:A (2.4) BS01 CA 3.1.1.4 GO:0002446 ... P00592 1930837
    256061 4p2p:A (2.4) BS02 CA 3.1.1.4 GO:0002446 ... P00592 1930837
    256062 4p2q:A (3.3) BS01 peptide ? GO:0006955 ... P04224 24855945
    256063 4p2q:B (3.3) BS01 peptide ? GO:0006955 ... Q31163 24855945
    256064 4p2q:D (3.3) BS01 peptide N/A N/A N/A 24855945
    256065 4p2q:E (3.3) BS01 peptide N/A N/A N/A 24855945
    256066 4p2q:F (3.3) BS01 peptide ? GO:0006955 ... P04224 24855945
    256067 4p2q:G (3.3) BS01 peptide ? GO:0006955 ... Q31163 24855945
    256068 4p2q:I (3.3) BS01 peptide N/A N/A N/A 24855945
    256069 4p2q:J (3.3) BS01 peptide N/A N/A N/A 24855945
    256070 4p2q:K (3.3) BS01 peptide ? GO:0006955 ... P04224 24855945
    256071 4p2q:L (3.3) BS01 peptide ? GO:0006955 ... Q31163 24855945
    256072 4p2q:N (3.3) BS01 peptide N/A N/A N/A 24855945
    256073 4p2q:O (3.3) BS01 peptide N/A N/A N/A 24855945
    256074 4p2q:P (3.3) BS01 peptide ? GO:0006955 ... P04224 24855945
    256075 4p2q:Q (3.3) BS01 peptide ? GO:0006955 ... Q31163 24855945
    256076 4p2q:S (3.3) BS01 peptide N/A N/A N/A 24855945
    256077 4p2q:T (3.3) BS01 peptide N/A N/A N/A 24855945
    256078 4p2r:A (3.295) BS01 peptide ? GO:0006955 ... P04224 24855945
    256079 4p2r:B (3.295) BS01 peptide ? GO:0006955 ... Q31163 24855945
    256080 4p2r:D (3.295) BS01 peptide N/A N/A N/A 24855945
    256081 4p2r:E (3.295) BS01 peptide N/A N/A N/A 24855945
    256082 4p2r:F (3.295) BS01 peptide ? GO:0006955 ... P04224 24855945
    256083 4p2r:G (3.295) BS01 peptide ? GO:0006955 ... Q31163 24855945
    256084 4p2r:I (3.295) BS01 peptide N/A N/A N/A 24855945
    256085 4p2r:J (3.295) BS01 peptide N/A N/A N/A 24855945
    256086 4p2r:K (3.295) BS01 peptide ? GO:0006955 ... P04224 24855945
    256087 4p2r:L (3.295) BS01 peptide ? GO:0006955 ... Q31163 24855945
    256088 4p2r:N (3.295) BS01 peptide N/A N/A N/A 24855945
    256089 4p2r:O (3.295) BS01 peptide N/A N/A N/A 24855945
    256090 4p2r:P (3.295) BS01 peptide ? GO:0006955 ... P04224 24855945
    256091 4p2r:Q (3.295) BS01 peptide ? GO:0006955 ... Q31163 24855945
    256092 4p2r:S (3.295) BS01 peptide N/A N/A N/A 24855945
    256093 4p2r:T (3.295) BS01 peptide N/A N/A N/A 24855945
    256094 4p2t:A (2.15) BS01 24Q 3.4.21.97 GO:0004252 ... Q2HRB6 24977643 MOAD: ic50=3.7uM
    256095 4p2t:B (2.15) BS01 24Q 3.4.21.97 GO:0004252 ... Q2HRB6 24977643 MOAD: ic50=3.7uM
    256096 4p2t:B (2.15) BS02 24Q 3.4.21.97 GO:0004252 ... Q2HRB6 24977643 MOAD: ic50=3.7uM
    256097 4p2v:A (2.51) BS01 26T 2.3.1.245 GO:0004332 ... P76143 25225400
    256098 4p2v:B (2.51) BS01 26T 2.3.1.245 GO:0004332 ... P76143 25225400
    256099 4p2v:C (2.51) BS01 26T 2.3.1.245 GO:0004332 ... P76143 25225400
    256100 4p2v:D (2.51) BS01 26T 2.3.1.245 GO:0004332 ... P76143 25225400
    256101 4p2v:E (2.51) BS01 26T 2.3.1.245 GO:0004332 ... P76143 25225400
    256102 4p2v:F (2.51) BS01 26T 2.3.1.245 GO:0004332 ... P76143 25225400
    256103 4p2v:G (2.51) BS01 26T 2.3.1.245 GO:0004332 ... P76143 25225400
    256104 4p2v:H (2.51) BS01 26T 2.3.1.245 GO:0004332 ... P76143 25225400
    256105 4p2v:I (2.51) BS01 26T 2.3.1.245 GO:0004332 ... P76143 25225400
    256106 4p2v:K (2.51) BS01 26T 2.3.1.245 GO:0004332 ... P76143 25225400
    256107 4p2x:A (2.4) BS01 MG 4.6.1.1 GO:0009190 ... P9WQ35 25295175
    256108 4p2y:A (2.3) BS01 ZN ? N/A Q15109 27818100
    256109 4p2y:A (2.3) BS02 ZN ? N/A Q15109 27818100
    256110 4p2y:B (2.3) BS01 ZN ? GO:0001726 ... P14069 27818100
    256111 4p2y:B (2.3) BS02 CA ? GO:0001726 ... P14069 27818100
    256112 4p2y:B (2.3) BS03 CA ? GO:0001726 ... P14069 27818100
    256113 4p2z:B (3.08) BS01 2CV ? GO:0005216 ... A0L5S6 24850863
    256114 4p2z:B (3.08) BS02 2CV ? GO:0005216 ... A0L5S6 24850863
    256115 4p30:A (3.31) BS01 2CV ? GO:0005216 ... A0L5S6 24850863
    256116 4p30:B (3.31) BS01 2CV ? GO:0005216 ... A0L5S6 24850863
    256117 4p30:C (3.31) BS01 2CV ? GO:0005216 ... A0L5S6 24850863
    256118 4p30:C (3.31) BS02 2CV ? GO:0005216 ... A0L5S6 24850863
    256119 4p30:D (3.31) BS01 2CV ? GO:0005216 ... A0L5S6 24850863
    256120 4p31:A (2.05) BS01 ADP 7.5.2.- GO:0005515 ... P0A9V1 24639492
    256121 4p31:A (2.05) BS02 MG 7.5.2.- GO:0005515 ... P0A9V1 24639492
    256122 4p31:B (2.05) BS01 ADP 7.5.2.- GO:0005515 ... P0A9V1 24639492
    256123 4p31:B (2.05) BS02 MG 7.5.2.- GO:0005515 ... P0A9V1 24639492
    256124 4p32:A (1.55) BS01 ADP 7.5.2.- GO:0005515 ... P0A9V1 24639492
    256125 4p32:A (1.55) BS02 MG 7.5.2.- GO:0005515 ... P0A9V1 24639492
    256126 4p32:B (1.55) BS01 ADP 7.5.2.- GO:0005515 ... P0A9V1 24639492
    256127 4p32:B (1.55) BS02 MG 7.5.2.- GO:0005515 ... P0A9V1 24639492
    256128 4p33:A (1.65) BS01 ATP 7.5.2.- GO:0005515 ... P0A9V1 24639492
    256129 4p33:B (1.65) BS01 ATP 7.5.2.- GO:0005515 ... P0A9V1 24639492
    256130 4p35:A (1.75) BS01 ZN 3.1.2.-
    3.5.1.-
    3.5.1.124
    GO:0000785 ... Q99497 24697266
    256131 4p36:A (1.182) BS01 ZN 3.1.2.-
    3.5.1.-
    3.5.1.124
    GO:0000785 ... Q99497 24697266
    256132 4p38:A (2.8) BS01 NDP 1.1.1.146
    1.1.1.201
    GO:0005496 ... P28845 23088558
    256133 4p38:A (2.8) BS02 21T 1.1.1.146
    1.1.1.201
    GO:0005496 ... P28845 23088558 BindingDB: IC50=9nM
    256134 4p38:A (2.8) BS03 21T 1.1.1.146
    1.1.1.201
    GO:0005496 ... P28845 23088558 BindingDB: IC50=9nM
    256135 4p38:B (2.8) BS01 21T 1.1.1.146
    1.1.1.201
    GO:0005496 ... P28845 23088558 BindingDB: IC50=9nM
    256136 4p38:B (2.8) BS02 NDP 1.1.1.146
    1.1.1.201
    GO:0005496 ... P28845 23088558
    256137 4p38:B (2.8) BS03 21T 1.1.1.146
    1.1.1.201
    GO:0005496 ... P28845 23088558 BindingDB: IC50=9nM
    256138 4p3c:H (1.943) BS01 peptide N/A N/A N/A 25482542
    256139 4p3c:L (1.943) BS01 peptide N/A N/A N/A 25482542
    256140 4p3d:A (1.949) BS01 peptide N/A N/A N/A 25482542
    256141 4p3d:B (1.949) BS01 peptide ? N/A A2NHM3 25482542
    256142 4p3d:H (1.949) BS01 peptide N/A N/A N/A 25482542
    256143 4p3d:L (1.949) BS01 peptide ? N/A A2NHM3 25482542
    256144 4p3e:B (3.5) BS01 rna ? GO:0006614 ... P09132 24700861
    256145 4p3e:C (3.5) BS01 rna ? GO:0003723 ... Q9UHB9 24700861
    256146 4p3h:A (1.45) BS01 25G 3.4.21.97 GO:0004252 ... Q2HRB6 24977643 MOAD: ic50=1uM
    256147 4p3h:B (1.45) BS01 25G 3.4.21.97 GO:0004252 ... Q2HRB6 24977643 MOAD: ic50=1uM
    256148 4p3i:A (1.6941) BS01 GAL ? N/A G8FL04 24648450
    256149 4p3i:A (1.6941) BS02 FUC ? N/A G8FL04 24648450
    256150 4p3i:B (1.6941) BS01 GAL ? N/A G8FL04 24648450
    256151 4p3i:C (1.6941) BS01 GAL ? N/A G8FL04 24648450
    256152 4p3i:D (1.6941) BS01 FUC ? N/A G8FL04 24648450
    256153 4p3i:D (1.6941) BS02 GAL ? N/A G8FL04 24648450
    256154 4p3l:A (1.8) BS01 BDP ? GO:0030246 ... Q1QUN2 25540822
    256155 4p3n:A (2.6) BS01 2CR 6.1.1.3 GO:0000166 ... P26639 25824639
    256156 4p3n:A (2.6) BS02 ZN 6.1.1.3 GO:0000166 ... P26639 25824639
    256157 4p3n:B (2.6) BS01 2CR 6.1.1.3 GO:0000166 ... P26639 25824639
    256158 4p3n:B (2.6) BS02 ZN 6.1.1.3 GO:0000166 ... P26639 25824639
    256159 4p3n:C (2.6) BS01 2CR 6.1.1.3 GO:0000166 ... P26639 25824639
    256160 4p3n:C (2.6) BS02 ZN 6.1.1.3 GO:0000166 ... P26639 25824639
    256161 4p3n:D (2.6) BS01 2CR 6.1.1.3 GO:0000166 ... P26639 25824639
    256162 4p3n:D (2.6) BS02 ZN 6.1.1.3 GO:0000166 ... P26639 25824639
    256163 4p3o:A (2.505) BS01 ZN 6.1.1.3 GO:0000166 ... P0A8M3 25824639
    256164 4p3o:A (2.505) BS02 2CR 6.1.1.3 GO:0000166 ... P0A8M3 25824639
    256165 4p3o:B (2.505) BS01 ZN 6.1.1.3 GO:0000166 ... P0A8M3 25824639
    256166 4p3o:B (2.505) BS02 2CR 6.1.1.3 GO:0000166 ... P0A8M3 25824639
    256167 4p3p:A (2.1) BS01 ZN 6.1.1.3 GO:0000166 ... P0A8M3 25824639
    256168 4p3p:A (2.1) BS02 2CR 6.1.1.3 GO:0000166 ... P0A8M3 25824639 MOAD: Ki=4nM
    256169 4p3p:B (2.1) BS01 ZN 6.1.1.3 GO:0000166 ... P0A8M3 25824639
    256170 4p3p:B (2.1) BS02 2CR 6.1.1.3 GO:0000166 ... P0A8M3 25824639 MOAD: Ki=4nM
    256171 4p3q:A (1.351) BS01 CA N/A GO:0004146 ... N/A 24882744
    256172 4p3q:A (1.351) BS02 NAP N/A GO:0004146 ... N/A 24882744
    256173 4p3r:A (1.15) BS01 NAP N/A GO:0004146 ... N/A 24882744
    256174 4p3w:A (2.0) BS01 peptide ? GO:0030036 ... P21333 N/A
    256175 4p3w:A (2.0) BS02 peptide ? GO:0030036 ... P21333 N/A
    256176 4p3w:B (2.0) BS01 peptide ? GO:0030036 ... P21333 N/A
    256177 4p3w:B (2.0) BS02 peptide ? GO:0030036 ... P21333 N/A
    256178 4p3w:C (2.0) BS01 peptide ? GO:0030036 ... P21333 N/A
    256179 4p3w:C (2.0) BS02 peptide ? GO:0030036 ... P21333 N/A
    256180 4p3w:D (2.0) BS01 peptide ? GO:0030036 ... P21333 N/A
    256181 4p3w:D (2.0) BS02 peptide ? GO:0030036 ... P21333 N/A
    256182 4p3w:E (2.0) BS01 peptide ? GO:0030036 ... P21333 N/A
    256183 4p3w:E (2.0) BS02 peptide ? GO:0030036 ... P21333 N/A
    256184 4p3w:F (2.0) BS01 peptide ? GO:0030036 ... P21333 N/A
    256185 4p3w:F (2.0) BS02 peptide ? GO:0030036 ... P21333 N/A
    256186 4p3x:A (1.65) BS01 SF4 2.5.1.72 GO:0005737 ... Q9X1X7 24650327
    256187 4p3x:A (1.65) BS02 ZN 2.5.1.72 GO:0005737 ... Q9X1X7 24650327
    256188 4p3y:A (2.154) BS01 GDP ? GO:0000287 ... P0CE47 24860094
    256189 4p42:A (2.44) BS01 EGC ? GO:0006869 ... A0FGR8 24847877
    256190 4p42:B (2.44) BS01 EGC ? GO:0006869 ... A0FGR8 24847877
    256191 4p44:A (1.75) BS01 ZN 3.4.17.21 GO:0004180 ... Q04609 26460595
    256192 4p44:A (1.75) BS02 ZN 3.4.17.21 GO:0004180 ... Q04609 26460595
    256193 4p44:A (1.75) BS03 CA 3.4.17.21 GO:0004180 ... Q04609 26460595
    256194 4p44:A (1.75) BS04 2F7 3.4.17.21 GO:0004180 ... Q04609 26460595 MOAD: ic50=16nM
    256195 4p45:A (1.87) BS01 FUC 3.4.17.21 GO:0004180 ... Q04609 26460595
    256196 4p45:A (1.87) BS02 ZN 3.4.17.21 GO:0004180 ... Q04609 26460595
    256197 4p45:A (1.87) BS03 ZN 3.4.17.21 GO:0004180 ... Q04609 26460595
    256198 4p45:A (1.87) BS04 CA 3.4.17.21 GO:0004180 ... Q04609 26460595
    256199 4p45:A (1.87) BS05 2F9 3.4.17.21 GO:0004180 ... Q04609 26460595 MOAD: ic50=16nM
    256200 4p4b:A (1.93) BS01 ZN 3.4.17.21 GO:0004180 ... Q04609 26460595

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).