SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    256401 4p6f:R9 (3.6) BS01 rna ? GO:0003735 ... Q5SHR2 25198768
    256402 4p6f:RD (3.6) BS01 rna ? GO:0002181 ... P60405 25198768
    256403 4p6f:RD (3.6) BS02 MG ? GO:0002181 ... P60405 25198768
    256404 4p6f:RE (3.6) BS01 rna ? GO:0003735 ... Q5SHN8 25198768
    256405 4p6f:RF (3.6) BS01 rna ? GO:0003735 ... Q5SHN9 25198768
    256406 4p6f:RF (3.6) BS02 MG ? GO:0003735 ... Q5SHN9 25198768
    256407 4p6f:RG (3.6) BS01 rna ? GO:0000049 ... Q5SHQ0 25198768
    256408 4p6f:RG (3.6) BS02 rna ? GO:0000049 ... Q5SHQ0 25198768
    256409 4p6f:RG (3.6) BS03 rna ? GO:0000049 ... Q5SHQ0 25198768
    256410 4p6f:RH (3.6) BS01 rna N/A GO:0002181 ... P0DOY8 25198768
    256411 4p6f:RI (3.6) BS01 rna ? GO:0003735 ... Q5SLQ1 25198768
    256412 4p6f:RN (3.6) BS01 rna ? GO:0003729 ... P60488 25198768
    256413 4p6f:RO (3.6) BS01 rna ? GO:0003735 ... Q5SHP8 25198768
    256414 4p6f:RO (3.6) BS02 rna ? GO:0003735 ... Q5SHP8 25198768
    256415 4p6f:RP (3.6) BS01 rna ? GO:0003735 ... Q5SHQ7 25198768
    256416 4p6f:RP (3.6) BS02 MG ? GO:0003735 ... Q5SHQ7 25198768
    256417 4p6f:RP (3.6) BS03 MG ? GO:0003735 ... Q5SHQ7 25198768
    256418 4p6f:RQ (3.6) BS01 rna ? GO:0003735 ... P60489 25198768
    256419 4p6f:RQ (3.6) BS02 rna ? GO:0003735 ... P60489 25198768
    256420 4p6f:RR (3.6) BS01 rna ? GO:0003735 ... Q9Z9H5 25198768
    256421 4p6f:RS (3.6) BS01 rna ? GO:0003735 ... Q5SHQ4 25198768
    256422 4p6f:RS (3.6) BS02 rna ? GO:0003735 ... Q5SHQ4 25198768
    256423 4p6f:RT (3.6) BS01 rna ? GO:0003735 ... P60490 25198768
    256424 4p6f:RT (3.6) BS02 rna ? GO:0003735 ... P60490 25198768
    256425 4p6f:RU (3.6) BS01 rna ? GO:0000027 ... P60491 25198768
    256426 4p6f:RV (3.6) BS01 rna ? GO:0003723 ... P60492 25198768
    256427 4p6f:RW (3.6) BS01 rna ? GO:0003735 ... Q5SHP3 25198768
    256428 4p6f:RX (3.6) BS01 rna ? GO:0003735 ... Q5SHP0 25198768
    256429 4p6f:RY (3.6) BS01 rna ? GO:0003723 ... Q5SHP9 25198768
    256430 4p6f:RZ (3.6) BS01 rna ? GO:0003723 ... Q5SHZ1 25198768
    256431 4p6f:RZ (3.6) BS02 rna ? GO:0003723 ... Q5SHZ1 25198768
    256432 4p6f:XB (3.6) BS01 rna ? GO:0003735 ... P80371 25198768
    256433 4p6f:XC (3.6) BS01 rna ? GO:0003676 ... P80372 25198768
    256434 4p6f:XD (3.6) BS01 rna ? GO:0003723 ... P80373 25198768
    256435 4p6f:XD (3.6) BS02 ZN ? GO:0003723 ... P80373 25198768
    256436 4p6f:XE (3.6) BS01 rna ? GO:0003723 ... Q5SHQ5 25198768
    256437 4p6f:XF (3.6) BS01 rna ? GO:0003735 ... Q5SLP8 25198768
    256438 4p6f:XG (3.6) BS01 rna ? GO:0000049 ... P17291 25198768
    256439 4p6f:XG (3.6) BS02 rna ? GO:0000049 ... P17291 25198768
    256440 4p6f:XH (3.6) BS01 rna N/A GO:0003735 ... P0DOY9 25198768
    256441 4p6f:XI (3.6) BS01 rna ? GO:0003723 ... P80374 25198768
    256442 4p6f:XI (3.6) BS02 rna ? GO:0003723 ... P80374 25198768
    256443 4p6f:XJ (3.6) BS01 rna ? GO:0000049 ... Q5SHN7 25198768
    256444 4p6f:XK (3.6) BS01 rna ? GO:0003735 ... P80376 25198768
    256445 4p6f:XL (3.6) BS01 rna ? GO:0000049 ... Q5SHN3 25198768
    256446 4p6f:XM (3.6) BS01 rna ? GO:0000049 ... P80377 25198768
    256447 4p6f:XM (3.6) BS02 rna ? GO:0000049 ... P80377 25198768
    256448 4p6f:XM (3.6) BS03 rna ? GO:0000049 ... P80377 25198768
    256449 4p6f:XM (3.6) BS04 rna ? GO:0000049 ... P80377 25198768
    256450 4p6f:XM (3.6) BS05 MG ? GO:0000049 ... P80377 25198768
    256451 4p6f:XN (3.6) BS01 rna N/A GO:0003735 ... P0DOY6 25198768
    256452 4p6f:XN (3.6) BS02 ZN N/A GO:0003735 ... P0DOY6 25198768
    256453 4p6f:XO (3.6) BS01 rna ? GO:0003735 ... Q5SJ76 25198768
    256454 4p6f:XO (3.6) BS02 rna ? GO:0003735 ... Q5SJ76 25198768
    256455 4p6f:XP (3.6) BS01 rna ? GO:0003735 ... Q5SJH3 25198768
    256456 4p6f:XQ (3.6) BS01 rna N/A GO:0003735 ... P0DOY7 25198768
    256457 4p6f:XR (3.6) BS01 rna ? GO:0003735 ... Q5SLQ0 25198768
    256458 4p6f:XS (3.6) BS01 rna ? GO:0000028 ... Q5SHP2 25198768
    256459 4p6f:XT (3.6) BS01 rna ? GO:0003723 ... P80380 25198768
    256460 4p6f:Y0 (3.6) BS01 rna ? GO:0003735 ... P60493 25198768
    256461 4p6f:Y0 (3.6) BS02 rna ? GO:0003735 ... P60493 25198768
    256462 4p6f:Y0 (3.6) BS03 rna ? GO:0003735 ... P60493 25198768
    256463 4p6f:Y1 (3.6) BS01 rna ? GO:0003735 ... P60494 25198768
    256464 4p6f:Y2 (3.6) BS01 rna ? GO:0003735 ... Q5SHP6 25198768
    256465 4p6f:Y3 (3.6) BS01 rna ? GO:0003735 ... Q5SHQ6 25198768
    256466 4p6f:Y3 (3.6) BS02 rna ? GO:0003735 ... Q5SHQ6 25198768
    256467 4p6f:Y4 (3.6) BS01 rna ? GO:0003735 ... Q5SJE1 25198768
    256468 4p6f:Y4 (3.6) BS02 rna ? GO:0003735 ... Q5SJE1 25198768
    256469 4p6f:Y5 (3.6) BS01 rna ? GO:0003735 ... P80339 25198768
    256470 4p6f:Y6 (3.6) BS01 rna ? GO:0003735 ... P35871 25198768
    256471 4p6f:Y7 (3.6) BS01 rna ? GO:0003735 ... P80340 25198768
    256472 4p6f:Y8 (3.6) BS01 rna ? GO:0003735 ... Q5SKU1 25198768
    256473 4p6f:Y9 (3.6) BS01 rna ? GO:0003735 ... Q5SHR2 25198768
    256474 4p6f:YD (3.6) BS01 rna ? GO:0002181 ... P60405 25198768
    256475 4p6f:YD (3.6) BS02 rna ? GO:0002181 ... P60405 25198768
    256476 4p6f:YD (3.6) BS03 MG ? GO:0002181 ... P60405 25198768
    256477 4p6f:YE (3.6) BS01 rna ? GO:0003735 ... Q5SHN8 25198768
    256478 4p6f:YF (3.6) BS01 rna ? GO:0003735 ... Q5SHN9 25198768
    256479 4p6f:YG (3.6) BS01 rna ? GO:0000049 ... Q5SHQ0 25198768
    256480 4p6f:YG (3.6) BS02 rna ? GO:0000049 ... Q5SHQ0 25198768
    256481 4p6f:YG (3.6) BS03 rna ? GO:0000049 ... Q5SHQ0 25198768
    256482 4p6f:YH (3.6) BS01 rna N/A GO:0002181 ... P0DOY8 25198768
    256483 4p6f:YI (3.6) BS01 rna ? GO:0003735 ... Q5SLQ1 25198768
    256484 4p6f:YI (3.6) BS02 rna ? GO:0003735 ... Q5SLQ1 25198768
    256485 4p6f:YN (3.6) BS01 rna ? GO:0003729 ... P60488 25198768
    256486 4p6f:YO (3.6) BS01 rna ? GO:0003735 ... Q5SHP8 25198768
    256487 4p6f:YO (3.6) BS02 rna ? GO:0003735 ... Q5SHP8 25198768
    256488 4p6f:YP (3.6) BS01 rna ? GO:0003735 ... Q5SHQ7 25198768
    256489 4p6f:YQ (3.6) BS01 rna ? GO:0003735 ... P60489 25198768
    256490 4p6f:YQ (3.6) BS02 rna ? GO:0003735 ... P60489 25198768
    256491 4p6f:YR (3.6) BS01 rna ? GO:0003735 ... Q9Z9H5 25198768
    256492 4p6f:YS (3.6) BS01 rna ? GO:0003735 ... Q5SHQ4 25198768
    256493 4p6f:YS (3.6) BS02 rna ? GO:0003735 ... Q5SHQ4 25198768
    256494 4p6f:YT (3.6) BS01 rna ? GO:0003735 ... P60490 25198768
    256495 4p6f:YT (3.6) BS02 rna ? GO:0003735 ... P60490 25198768
    256496 4p6f:YU (3.6) BS01 rna ? GO:0000027 ... P60491 25198768
    256497 4p6f:YV (3.6) BS01 rna ? GO:0003723 ... P60492 25198768
    256498 4p6f:YW (3.6) BS01 rna ? GO:0003735 ... Q5SHP3 25198768
    256499 4p6f:YX (3.6) BS01 rna ? GO:0003735 ... Q5SHP0 25198768
    256500 4p6f:YX (3.6) BS02 MG ? GO:0003735 ... Q5SHP0 25198768
    256501 4p6f:YY (3.6) BS01 rna ? GO:0003723 ... Q5SHP9 25198768
    256502 4p6f:YZ (3.6) BS01 rna ? GO:0003723 ... Q5SHZ1 25198768
    256503 4p6f:YZ (3.6) BS02 rna ? GO:0003723 ... Q5SHZ1 25198768
    256504 4p6g:A (1.58) BS01 2FZ 3.4.22.27 GO:0006508 ... P25774 25313327 MOAD: ic50=7.7nM
    BindingDB: IC50=7.7nM
    256505 4p6g:B (1.58) BS01 2FZ 3.4.22.27 GO:0006508 ... P25774 25313327 MOAD: ic50=7.7nM
    BindingDB: IC50=7.7nM
    256506 4p6g:C (1.58) BS01 2FZ 3.4.22.27 GO:0006508 ... P25774 25313327 MOAD: ic50=7.7nM
    BindingDB: IC50=7.7nM
    256507 4p6g:D (1.58) BS01 2FZ 3.4.22.27 GO:0006508 ... P25774 25313327 MOAD: ic50=7.7nM
    BindingDB: IC50=7.7nM
    256508 4p6p:A (1.862) BS01 RES 4.1.99.12 GO:0000287 ... Q9KKP2 25792735 MOAD: Ki=100uM
    256509 4p6p:A (1.862) BS02 ZN 4.1.99.12 GO:0000287 ... Q9KKP2 25792735
    256510 4p6p:B (1.862) BS01 RES 4.1.99.12 GO:0000287 ... Q9KKP2 25792735 MOAD: Ki=100uM
    256511 4p6p:B (1.862) BS02 ZN 4.1.99.12 GO:0000287 ... Q9KKP2 25792735
    256512 4p6r:A (2.2) BS01 ZN 1.14.18.1 GO:0016491 ... B2ZB02 25074014
    256513 4p6r:A (2.2) BS02 ZN 1.14.18.1 GO:0016491 ... B2ZB02 25074014
    256514 4p6r:A (2.2) BS03 TYR 1.14.18.1 GO:0016491 ... B2ZB02 25074014
    256515 4p6r:B (2.2) BS01 ZN 1.14.18.1 GO:0016491 ... B2ZB02 25074014
    256516 4p6r:B (2.2) BS02 ZN 1.14.18.1 GO:0016491 ... B2ZB02 25074014
    256517 4p6r:B (2.2) BS03 TYR 1.14.18.1 GO:0016491 ... B2ZB02 25074014
    256518 4p6s:A (2.2) BS01 ZN 1.14.18.1 GO:0016491 ... B2ZB02 25074014
    256519 4p6s:A (2.2) BS02 ZN 1.14.18.1 GO:0016491 ... B2ZB02 25074014
    256520 4p6s:A (2.2) BS03 ZN 1.14.18.1 GO:0016491 ... B2ZB02 25074014
    256521 4p6s:A (2.2) BS04 DAH 1.14.18.1 GO:0016491 ... B2ZB02 25074014
    256522 4p6s:A (2.2) BS05 DAH 1.14.18.1 GO:0016491 ... B2ZB02 25074014
    256523 4p6s:B (2.2) BS01 ZN 1.14.18.1 GO:0016491 ... B2ZB02 25074014
    256524 4p6s:B (2.2) BS02 ZN 1.14.18.1 GO:0016491 ... B2ZB02 25074014
    256525 4p6s:B (2.2) BS03 DAH 1.14.18.1 GO:0016491 ... B2ZB02 25074014
    256526 4p6s:B (2.2) BS04 DAH 1.14.18.1 GO:0016491 ... B2ZB02 25074014
    256527 4p6t:A (2.5) BS01 YRL 1.14.18.1 GO:0016491 ... B2ZB02 25074014
    256528 4p6t:A (2.5) BS02 CU 1.14.18.1 GO:0016491 ... B2ZB02 25074014
    256529 4p6t:A (2.5) BS03 CU 1.14.18.1 GO:0016491 ... B2ZB02 25074014
    256530 4p6t:B (2.5) BS01 YRL 1.14.18.1 GO:0016491 ... B2ZB02 25074014
    256531 4p6t:B (2.5) BS02 CU 1.14.18.1 GO:0016491 ... B2ZB02 25074014
    256532 4p6t:B (2.5) BS03 CU 1.14.18.1 GO:0016491 ... B2ZB02 25074014
    256533 4p6w:A (1.951) BS01 peptide ? N/A P04150 24763108
    256534 4p6w:A (1.951) BS02 MOF ? N/A P04150 24763108 MOAD: Ki=0.7nM
    BindingDB: Ki=0.700000nM
    256535 4p6x:A (2.5) BS01 peptide ? N/A P04150 24763108
    256536 4p6x:A (2.5) BS02 HCY ? N/A P04150 24763108 MOAD: Ki=91nM
    BindingDB: Ki=30nM
    256537 4p6x:C (2.5) BS01 peptide ? N/A P04150 24763108
    256538 4p6x:C (2.5) BS02 HCY ? N/A P04150 24763108 MOAD: Ki=91nM
    BindingDB: Ki=30nM
    256539 4p6x:E (2.5) BS01 peptide ? N/A P04150 24763108
    256540 4p6x:E (2.5) BS02 HCY ? N/A P04150 24763108 MOAD: Ki=91nM
    BindingDB: Ki=30nM
    256541 4p6x:G (2.5) BS01 peptide ? N/A P04150 24763108
    256542 4p6x:G (2.5) BS02 HCY ? N/A P04150 24763108 MOAD: Ki=91nM
    BindingDB: Ki=30nM
    256543 4p6x:I (2.5) BS01 peptide ? N/A P04150 24763108
    256544 4p6x:I (2.5) BS02 peptide ? N/A P04150 24763108
    256545 4p6x:I (2.5) BS03 HCY ? N/A P04150 24763108 MOAD: Ki=91nM
    BindingDB: Ki=30nM
    256546 4p6x:K (2.5) BS01 peptide ? N/A P04150 24763108
    256547 4p6x:K (2.5) BS02 peptide ? N/A P04150 24763108
    256548 4p6x:K (2.5) BS03 HCY ? N/A P04150 24763108 MOAD: Ki=91nM
    BindingDB: Ki=30nM
    256549 4p6z:M (3.0) BS01 peptide ? GO:0005515 ... P35585 24843023
    256550 4p6z:S (3.0) BS01 peptide ? GO:0000139 ... P61966 24843023
    256551 4p70:QB (3.68) BS01 rna ? GO:0003735 ... P80371 25128388
    256552 4p70:QC (3.68) BS01 rna ? GO:0003676 ... P80372 25128388
    256553 4p70:QD (3.68) BS01 rna ? GO:0003723 ... P80373 25128388
    256554 4p70:QD (3.68) BS02 ZN ? GO:0003723 ... P80373 25128388
    256555 4p70:QE (3.68) BS01 rna ? GO:0003723 ... Q5SHQ5 25128388
    256556 4p70:QF (3.68) BS01 rna ? GO:0003735 ... Q5SLP8 25128388
    256557 4p70:QG (3.68) BS01 rna ? GO:0000049 ... P17291 25128388
    256558 4p70:QH (3.68) BS01 rna N/A GO:0003735 ... P0DOY9 25128388
    256559 4p70:QI (3.68) BS01 rna ? GO:0003723 ... P80374 25128388
    256560 4p70:QI (3.68) BS02 rna ? GO:0003723 ... P80374 25128388
    256561 4p70:QJ (3.68) BS01 rna ? GO:0000049 ... Q5SHN7 25128388
    256562 4p70:QJ (3.68) BS02 rna ? GO:0000049 ... Q5SHN7 25128388
    256563 4p70:QK (3.68) BS01 rna ? GO:0003735 ... P80376 25128388
    256564 4p70:QL (3.68) BS01 rna ? GO:0000049 ... Q5SHN3 25128388
    256565 4p70:QM (3.68) BS01 rna ? GO:0000049 ... P80377 25128388
    256566 4p70:QM (3.68) BS02 rna ? GO:0000049 ... P80377 25128388
    256567 4p70:QM (3.68) BS03 MG ? GO:0000049 ... P80377 25128388
    256568 4p70:QN (3.68) BS01 rna N/A GO:0003735 ... P0DOY6 25128388
    256569 4p70:QN (3.68) BS02 ZN N/A GO:0003735 ... P0DOY6 25128388
    256570 4p70:QO (3.68) BS01 rna ? GO:0003735 ... Q5SJ76 25128388
    256571 4p70:QO (3.68) BS02 rna ? GO:0003735 ... Q5SJ76 25128388
    256572 4p70:QP (3.68) BS01 rna ? GO:0003735 ... Q5SJH3 25128388
    256573 4p70:QQ (3.68) BS01 rna N/A GO:0003735 ... P0DOY7 25128388
    256574 4p70:QR (3.68) BS01 rna ? GO:0003735 ... Q5SLQ0 25128388
    256575 4p70:QS (3.68) BS01 rna ? GO:0000028 ... Q5SHP2 25128388
    256576 4p70:QT (3.68) BS01 rna ? GO:0003723 ... P80380 25128388
    256577 4p70:R0 (3.68) BS01 rna ? GO:0003735 ... P60493 25128388
    256578 4p70:R0 (3.68) BS02 rna ? GO:0003735 ... P60493 25128388
    256579 4p70:R0 (3.68) BS03 rna ? GO:0003735 ... P60493 25128388
    256580 4p70:R1 (3.68) BS01 rna ? GO:0003735 ... P60494 25128388
    256581 4p70:R2 (3.68) BS01 rna ? GO:0003735 ... Q5SHP6 25128388
    256582 4p70:R3 (3.68) BS01 rna ? GO:0003735 ... Q5SHQ6 25128388
    256583 4p70:R3 (3.68) BS02 rna ? GO:0003735 ... Q5SHQ6 25128388
    256584 4p70:R4 (3.68) BS01 rna ? GO:0003735 ... Q5SJE1 25128388
    256585 4p70:R4 (3.68) BS02 rna ? GO:0003735 ... Q5SJE1 25128388
    256586 4p70:R5 (3.68) BS01 rna ? GO:0003735 ... P80339 25128388
    256587 4p70:R6 (3.68) BS01 rna ? GO:0003735 ... P35871 25128388
    256588 4p70:R7 (3.68) BS01 rna ? GO:0003735 ... P80340 25128388
    256589 4p70:R8 (3.68) BS01 rna ? GO:0003735 ... Q5SKU1 25128388
    256590 4p70:R9 (3.68) BS01 rna ? GO:0003735 ... Q5SHR2 25128388
    256591 4p70:RD (3.68) BS01 rna ? GO:0002181 ... P60405 25128388
    256592 4p70:RD (3.68) BS02 rna ? GO:0002181 ... P60405 25128388
    256593 4p70:RE (3.68) BS01 rna ? GO:0003735 ... Q5SHN8 25128388
    256594 4p70:RF (3.68) BS01 rna ? GO:0003735 ... Q5SHN9 25128388
    256595 4p70:RF (3.68) BS02 MG ? GO:0003735 ... Q5SHN9 25128388
    256596 4p70:RG (3.68) BS01 rna ? GO:0000049 ... Q5SHQ0 25128388
    256597 4p70:RG (3.68) BS02 rna ? GO:0000049 ... Q5SHQ0 25128388
    256598 4p70:RG (3.68) BS03 rna ? GO:0000049 ... Q5SHQ0 25128388
    256599 4p70:RH (3.68) BS01 rna N/A GO:0002181 ... P0DOY8 25128388
    256600 4p70:RI (3.68) BS01 rna ? GO:0003735 ... Q5SLQ1 25128388

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).