SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    257201 4pbu:c (5.0) BS15 CLA ? GO:0005737 ... Q8DIF8 25043005
    257202 4pbu:d (5.0) BS01 FE2 1.10.3.9 GO:0005506 ... Q8CM25 25043005
    257203 4pbu:d (5.0) BS02 CLA 1.10.3.9 GO:0005506 ... Q8CM25 25043005
    257204 4pbu:d (5.0) BS03 CLA 1.10.3.9 GO:0005506 ... Q8CM25 25043005
    257205 4pbu:d (5.0) BS04 PHO 1.10.3.9 GO:0005506 ... Q8CM25 25043005
    257206 4pbu:d (5.0) BS05 BCT 1.10.3.9 GO:0005506 ... Q8CM25 25043005
    257207 4pbu:d (5.0) BS06 CLA 1.10.3.9 GO:0005506 ... Q8CM25 25043005
    257208 4pbu:d (5.0) BS07 CLA 1.10.3.9 GO:0005506 ... Q8CM25 25043005
    257209 4pbu:d (5.0) BS08 PHO 1.10.3.9 GO:0005506 ... Q8CM25 25043005
    257210 4pbu:d (5.0) BS09 CLA 1.10.3.9 GO:0005506 ... Q8CM25 25043005
    257211 4pbu:d (5.0) BS10 CLA 1.10.3.9 GO:0005506 ... Q8CM25 25043005
    257212 4pbu:e (5.0) BS01 HEM ? GO:0005506 ... Q8DIP0 25043005
    257213 4pbu:f (5.0) BS01 HEM ? GO:0009523 ... Q8DIN9 25043005
    257214 4pbu:h (5.0) BS01 CLA ? GO:0009523 ... Q8DJ43 25043005
    257215 4pbu:h (5.0) BS02 CLA ? GO:0009523 ... Q8DJ43 25043005
    257216 4pbu:h (5.0) BS03 CLA ? GO:0009523 ... Q8DJ43 25043005
    257217 4pbu:i (5.0) BS01 CLA ? GO:0005737 ... Q8DJZ6 25043005
    257218 4pbu:i (5.0) BS02 CLA ? GO:0005737 ... Q8DJZ6 25043005
    257219 4pbu:j (5.0) BS01 peptide ? GO:0009523 ... P59087 25043005
    257220 4pbu:j (5.0) BS02 MG ? GO:0009523 ... P59087 25043005
    257221 4pbu:k (5.0) BS01 peptide ? GO:0009523 ... Q9F1K9 25043005
    257222 4pbu:k (5.0) BS02 CLA ? GO:0009523 ... Q9F1K9 25043005
    257223 4pbu:k (5.0) BS03 CLA ? GO:0009523 ... Q9F1K9 25043005
    257224 4pbu:o (5.0) BS01 CA ? GO:0009654 ... P0A431 25043005
    257225 4pbu:v (5.0) BS01 HEM ? GO:0005506 ... P0A386 25043005
    257226 4pbu:x (5.0) BS01 CLA ? GO:0009523 ... Q9F1R6 25043005
    257227 4pbu:z (5.0) BS01 peptide ? GO:0009523 ... Q8DHJ2 25043005
    257228 4pbu:z (5.0) BS02 CLA ? GO:0009523 ... Q8DHJ2 25043005
    257229 4pby:A (2.5) BS01 peptide ? GO:0000118 ... Q09028 24920672
    257230 4pby:B (2.5) BS01 peptide ? GO:0000118 ... Q09028 24920672
    257231 4pbz:A (2.15) BS01 peptide ? GO:0000118 ... Q09028 24920672
    257232 4pc0:A (2.5) BS01 peptide ? GO:0000118 ... Q09028 24920672
    257233 4pc0:B (2.5) BS01 peptide ? GO:0000118 ... Q09028 24920672
    257234 4pc2:A (2.1999) BS01 GDP ? GO:0000287 ... A0A0M3KKV1 26073967
    257235 4pc2:B (2.1999) BS01 GDP ? GO:0000287 ... A0A0M3KKV1 26073967
    257236 4pc3:A (1.8313) BS01 GDP ? GO:0000287 ... P0CE47 26073967
    257237 4pc3:B (1.8313) BS01 GDP ? GO:0000287 ... P0CE47 26073967
    257238 4pc6:A (2.2) BS01 GNP ? GO:0000287 ... A0A0M3KKV1 26073967
    257239 4pc6:B (2.2) BS01 GNP ? GO:0000287 ... A0A0M3KKV1 26073967
    257240 4pc7:A (3.6003) BS01 GNP ? GO:0000287 ... P0CE47 26073967
    257241 4pc7:A (3.6003) BS02 PUL ? GO:0000287 ... P0CE47 26073967
    257242 4pc7:A (3.6003) BS03 MG ? GO:0000287 ... P0CE47 26073967
    257243 4pc8:A (1.55) BS01 GOA 5.3.1.1 GO:0004807 ... P04789 27303904
    257244 4pc9:A (1.3) BS01 CS2 ? GO:0030288 ... Q16BC9 25540822
    257245 4pca:A (1.5) BS01 MN N/A GO:0008171 ... N/A 26544981
    257246 4pca:A (1.5) BS02 SAH N/A GO:0008171 ... N/A 26544981
    257247 4pca:B (1.5) BS01 MN N/A GO:0008171 ... N/A 26544981
    257248 4pca:B (1.5) BS02 SAH N/A GO:0008171 ... N/A 26544981
    257249 4pca:C (1.5) BS01 MN N/A GO:0008171 ... N/A 26544981
    257250 4pca:C (1.5) BS02 SAH N/A GO:0008171 ... N/A 26544981
    257251 4pca:D (1.5) BS01 MN N/A GO:0008171 ... N/A 26544981
    257252 4pca:D (1.5) BS02 SAH N/A GO:0008171 ... N/A 26544981
    257253 4pcb:A (2.5) BS01 dna ? N/A Q47673 25123661
    257254 4pcb:C (2.5) BS01 dna ? N/A Q47673 25123661
    257255 4pcd:A (1.7) BS01 2Q2 ? GO:0030288 ... Q16BC9 25540822
    257256 4pce:A (1.293) BS01 2N0 ? N/A O60885 24767840 MOAD: ic50=7uM
    BindingDB: IC50=7000nM
    257257 4pci:A (1.25) BS01 2NJ ? N/A O60885 24767840 MOAD: ic50=7.5uM
    BindingDB: IC50=7500nM
    257258 4pcl:A (1.85) BS01 SAM N/A GO:0008171 ... N/A 26544981
    257259 4pcl:A (1.85) BS02 MN N/A GO:0008171 ... N/A 26544981
    257260 4pcl:B (1.85) BS01 SAM N/A GO:0008171 ... N/A 26544981
    257261 4pcl:B (1.85) BS02 MN N/A GO:0008171 ... N/A 26544981
    257262 4pcn:A (1.54) BS01 ZN ? GO:0004063 ... A0A060GSW0 27618189
    257263 4pcn:A (1.54) BS02 ZN ? GO:0004063 ... A0A060GSW0 27618189
    257264 4pcn:B (1.54) BS01 ZN ? GO:0004063 ... A0A060GSW0 27618189
    257265 4pcn:B (1.54) BS02 ZN ? GO:0004063 ... A0A060GSW0 27618189
    257266 4pcp:A (1.63) BS01 ZN 3.1.8.1 GO:0004063 ... A0A060GYS1 27618189
    257267 4pcp:A (1.63) BS02 ZN 3.1.8.1 GO:0004063 ... A0A060GYS1 27618189
    257268 4pcp:G (1.63) BS01 ZN 3.1.8.1 GO:0004063 ... A0A060GYS1 27618189
    257269 4pcp:G (1.63) BS02 ZN 3.1.8.1 GO:0004063 ... A0A060GYS1 27618189
    257270 4pcr:A (2.15) BS01 CA ? GO:0030246 ... P55915 N/A
    257271 4pcr:A (2.15) BS02 MN ? GO:0030246 ... P55915 N/A
    257272 4pcr:A (2.15) BS03 ABU ? GO:0030246 ... P55915 N/A
    257273 4pcr:A (2.15) BS04 ABU ? GO:0030246 ... P55915 N/A
    257274 4pcr:D (2.15) BS01 CA ? GO:0030246 ... P55915 N/A
    257275 4pcr:D (2.15) BS02 MN ? GO:0030246 ... P55915 N/A
    257276 4pcs:A (1.77) BS01 2M7 ? GO:0004560 ... Q8A3I4 25427942
    257277 4pcs:B (1.77) BS01 2M7 ? GO:0004560 ... Q8A3I4 25427942
    257278 4pcs:C (1.77) BS01 2M7 ? GO:0004560 ... Q8A3I4 25427942
    257279 4pcs:D (1.77) BS01 2M7 ? GO:0004560 ... Q8A3I4 25427942
    257280 4pct:A (2.1) BS01 H76 3.2.1.51 GO:0004560 ... Q8A3I4 25427942
    257281 4pct:B (2.1) BS01 H76 3.2.1.51 GO:0004560 ... Q8A3I4 25427942
    257282 4pct:C (2.1) BS01 H76 3.2.1.51 GO:0004560 ... Q8A3I4 25427942
    257283 4pct:D (2.1) BS01 H76 3.2.1.51 GO:0004560 ... Q8A3I4 25427942
    257284 4pcu:A (3.578) BS01 HEM 4.2.1.22 GO:0004122 ... P35520 25197074
    257285 4pcu:A (3.578) BS02 PLP 4.2.1.22 GO:0004122 ... P35520 25197074
    257286 4pcu:A (3.578) BS03 SAM 4.2.1.22 GO:0004122 ... P35520 25197074
    257287 4pcu:B (3.578) BS01 HEM 4.2.1.22 GO:0004122 ... P35520 25197074
    257288 4pcu:B (3.578) BS02 PLP 4.2.1.22 GO:0004122 ... P35520 25197074
    257289 4pcu:B (3.578) BS03 SAM 4.2.1.22 GO:0004122 ... P35520 25197074
    257290 4pcw:A (2.2) BS01 CA ? GO:0005509 ... P20930 25760235
    257291 4pcw:A (2.2) BS02 CA ? GO:0005509 ... P20930 25760235
    257292 4pcw:B (2.2) BS01 CA ? GO:0005509 ... P20930 25760235
    257293 4pcw:B (2.2) BS02 CA ? GO:0005509 ... P20930 25760235
    257294 4pcw:C (2.2) BS01 CA ? GO:0005509 ... P20930 25760235
    257295 4pcw:C (2.2) BS02 CA ? GO:0005509 ... P20930 25760235
    257296 4pcw:D (2.2) BS01 CA ? GO:0005509 ... P20930 25760235
    257297 4pcw:D (2.2) BS02 CA ? GO:0005509 ... P20930 25760235
    257298 4pcy:A (2.15) BS01 CU ? GO:0005507 ... P00299 3560221
    257299 4pcz:A (1.7) BS01 dna 3.2.2.23
    4.2.99.18
    GO:0003676 ... P42371 25143530
    257300 4pcz:A (1.7) BS02 dna 3.2.2.23
    4.2.99.18
    GO:0003676 ... P42371 25143530
    257301 4pcz:A (1.7) BS03 ZN 3.2.2.23
    4.2.99.18
    GO:0003676 ... P42371 25143530
    257302 4pd1:A (1.975) BS01 peptide 2.10.1.1
    2.7.7.75
    GO:0006777 ... Q03555 25137389
    257303 4pd2:A (1.65) BS01 dna 3.2.2.23
    4.2.99.18
    GO:0003676 ... P42371 25143530
    257304 4pd2:A (1.65) BS02 dna 3.2.2.23
    4.2.99.18
    GO:0003676 ... P42371 25143530
    257305 4pd2:A (1.65) BS03 ZN 3.2.2.23
    4.2.99.18
    GO:0003676 ... P42371 25143530
    257306 4pd4:C (3.04) BS01 HEM 7.1.1.8 GO:0005739 ... P00163 24893593
    257307 4pd4:C (3.04) BS02 HEM 7.1.1.8 GO:0005739 ... P00163 24893593
    257308 4pd4:C (3.04) BS03 AOQ 7.1.1.8 GO:0005739 ... P00163 24893593
    257309 4pd4:C (3.04) BS04 UQ6 7.1.1.8 GO:0005739 ... P00163 24893593
    257310 4pd4:D (3.04) BS01 HEM 7.1.1.8 GO:0009055 ... P07143 24893593
    257311 4pd4:E (3.04) BS01 FES 7.1.1.8 GO:0008121 ... P08067 24893593
    257312 4pd5:A (2.906) BS01 GEO ? GO:0005337 ... Q9KPL5 25082345
    257313 4pd5:A (2.906) BS02 DMU ? GO:0005337 ... Q9KPL5 25082345
    257314 4pd6:A (2.08) BS01 URI ? GO:0005337 ... Q9KPL5 25082345 MOAD: Kd=36uM
    257315 4pd7:A (2.909) BS01 ZE8 ? GO:0005337 ... Q9KPL5 25082345
    257316 4pd8:A (2.75) BS01 P0C ? GO:0005337 ... Q9KPL5 25082345
    257317 4pd9:A (3.096) BS01 ADN ? GO:0005337 ... Q9KPL5 25082345
    257318 4pda:A (2.608) BS01 CTN ? GO:0005337 ... Q9KPL5 25082345
    257319 4pdb:A (2.6) BS01 rna ? GO:0003735 ... Q81VR6 25140011
    257320 4pdd:A (1.7) BS01 EAX ? GO:0030246 ... A0ACD6B887 25540822
    257321 4pdd:B (1.7) BS01 EAX ? GO:0030246 ... A0ACD6B887 25540822
    257322 4pdd:C (1.7) BS01 EAX ? GO:0030246 ... A0ACD6B887 25540822
    257323 4pde:A (2.8) BS01 GDP ? GO:0005515 ... P32177 25649206
    257324 4pdg:A (2.4) BS01 dna 3.2.2.23
    4.2.99.18
    GO:0003676 ... P42371 25143530
    257325 4pdg:A (2.4) BS02 dna 3.2.2.23
    4.2.99.18
    GO:0003676 ... P42371 25143530
    257326 4pdg:A (2.4) BS03 2ON 3.2.2.23
    4.2.99.18
    GO:0003676 ... P42371 25143530
    257327 4pdh:A (1.8) BS01 EAX ? GO:0030246 ... A0ACD6B893 25540822
    257328 4pdi:A (2.1) BS01 dna 3.2.2.23
    4.2.99.18
    GO:0003676 ... P42371 25143530
    257329 4pdi:A (2.1) BS02 dna 3.2.2.23
    4.2.99.18
    GO:0003676 ... P42371 25143530
    257330 4pdi:A (2.1) BS03 2ON 3.2.2.23
    4.2.99.18
    GO:0003676 ... P42371 25143530
    257331 4pdj:A (1.599) BS01 MN 1.5.1.3 GO:0004146 ... P0ABQ4 25453083
    257332 4pdj:A (1.599) BS02 DHF 1.5.1.3 GO:0004146 ... P0ABQ4 25453083
    257333 4pdj:A (1.599) BS03 NDP 1.5.1.3 GO:0004146 ... P0ABQ4 25453083
    257334 4pdk:A (2.8) BS01 3VV ? GO:0000062 ... Q9KQU8 25607896
    257335 4pdk:A (2.8) BS02 3VV ? GO:0000062 ... Q9KQU8 25607896
    257336 4pdk:A (2.8) BS03 3VV ? GO:0000062 ... Q9KQU8 25607896
    257337 4pdk:A (2.8) BS04 3VV ? GO:0000062 ... Q9KQU8 25607896
    257338 4pdk:B (2.8) BS01 3VV ? GO:0000062 ... Q9KQU8 25607896
    257339 4pdk:B (2.8) BS02 3VV ? GO:0000062 ... Q9KQU8 25607896
    257340 4pdk:B (2.8) BS03 3VV ? GO:0000062 ... Q9KQU8 25607896
    257341 4pdn:A (1.448) BS01 MG ? N/A A0A0J9X1Z5 25274739
    257342 4pds:A (2.9) BS01 ANP 2.7.12.1 GO:0004672 ... P22216 24815189
    257343 4pds:B (2.9) BS01 ANP 2.7.12.1 GO:0004672 ... P22216 24815189
    257344 4pdw:A (3.0) BS01 2XK 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0005198 ... P03303 24948704
    257345 4pdy:A (1.35) BS01 HIS ? GO:0042601 ... C8WS74 N/A
    257346 4pdz:A (1.73) BS01 CA ? GO:0001726 ... P02638 25268459
    257347 4pdz:A (1.73) BS02 CA ? GO:0001726 ... P02638 25268459
    257348 4pdz:A (1.73) BS03 CTI ? GO:0001726 ... P02638 25268459
    257349 4pdz:B (1.73) BS01 CTI ? GO:0001726 ... P02638 25268459
    257350 4pdz:B (1.73) BS02 CA ? GO:0001726 ... P02638 25268459
    257351 4pdz:B (1.73) BS03 CA ? GO:0001726 ... P02638 25268459
    257352 4pe0:A (1.08) BS01 NQS ? GO:0001726 ... P02638 25268459
    257353 4pe0:A (1.08) BS02 CA ? GO:0001726 ... P02638 25268459
    257354 4pe0:A (1.08) BS03 CA ? GO:0001726 ... P02638 25268459
    257355 4pe0:X (1.08) BS01 NQS ? GO:0001726 ... P02638 25268459
    257356 4pe0:X (1.08) BS02 CA ? GO:0001726 ... P02638 25268459
    257357 4pe0:X (1.08) BS03 CA ? GO:0001726 ... P02638 25268459
    257358 4pe1:A (1.576) BS01 DCD ? GO:0001726 ... P02638 25268459
    257359 4pe1:A (1.576) BS02 CA ? GO:0001726 ... P02638 25268459
    257360 4pe1:A (1.576) BS03 CA ? GO:0001726 ... P02638 25268459
    257361 4pe1:B (1.576) BS01 DCD ? GO:0001726 ... P02638 25268459
    257362 4pe1:B (1.576) BS02 CA ? GO:0001726 ... P02638 25268459
    257363 4pe1:B (1.576) BS03 CA ? GO:0001726 ... P02638 25268459
    257364 4pe2:A (1.724) BS01 GLC ? GO:0005515 ... P0AEX9 25599642
    257365 4pe2:A (1.724) BS02 GLC ? GO:0005515 ... P0AEX9 25599642
    257366 4pe3:A (1.35) BS01 ZN N/A GO:0055085 ... N/A 25540822
    257367 4pe3:A (1.35) BS02 ZN N/A GO:0055085 ... N/A 25540822
    257368 4pe4:A (2.178) BS01 REV ? GO:0001726 ... P02638 25268459
    257369 4pe4:A (2.178) BS02 CA ? GO:0001726 ... P02638 25268459
    257370 4pe4:A (2.178) BS03 CA ? GO:0001726 ... P02638 25268459
    257371 4pe4:X (2.178) BS01 REV ? GO:0001726 ... P02638 25268459
    257372 4pe4:X (2.178) BS02 CA ? GO:0001726 ... P02638 25268459
    257373 4pe4:X (2.178) BS03 CA ? GO:0001726 ... P02638 25268459
    257374 4pe5:A (3.96) BS01 GLY ? GO:0001540 ... P35439 24876489
    257375 4pe5:A (3.96) BS02 QEL ? GO:0001540 ... P35439 24876489 BindingDB: Ki=20nM, IC50=73nM
    257376 4pe5:B (3.96) BS01 QEL ? GO:0005216 ... Q00960 24876489 BindingDB: IC50=20nM, Ki=11nM
    257377 4pe5:B (3.96) BS02 GLU ? GO:0005216 ... Q00960 24876489
    257378 4pe5:C (3.96) BS01 QEL ? GO:0001540 ... P35439 24876489 BindingDB: Ki=20nM, IC50=73nM
    257379 4pe5:C (3.96) BS02 GLY ? GO:0001540 ... P35439 24876489
    257380 4pe5:D (3.96) BS01 QEL ? GO:0005216 ... Q00960 24876489 BindingDB: IC50=20nM, Ki=11nM
    257381 4pe5:D (3.96) BS02 GLU ? GO:0005216 ... Q00960 24876489
    257382 4pe6:A (1.86) BS01 LTH ? N/A D6Y8L8 N/A
    257383 4pe6:B (1.86) BS01 LTH ? N/A D6Y8L8 N/A
    257384 4pe7:A (1.652) BS01 ODN ? GO:0001726 ... P02638 25268459
    257385 4pe7:A (1.652) BS02 CA ? GO:0001726 ... P02638 25268459
    257386 4pe7:A (1.652) BS03 CA ? GO:0001726 ... P02638 25268459
    257387 4pe7:A (1.652) BS04 CA ? GO:0001726 ... P02638 25268459
    257388 4pe8:A (2.894) BS01 dna 3.1.11.-
    3.1.13.-
    GO:0000175 ... P27859 25114049
    257389 4pee:A (1.95) BS01 2OX ? GO:0004560 ... Q8A3I4 25427942
    257390 4pee:B (1.95) BS01 2OX ? GO:0004560 ... Q8A3I4 25427942
    257391 4pee:C (1.95) BS01 2OX ? GO:0004560 ... Q8A3I4 25427942
    257392 4pee:D (1.95) BS01 2OX ? GO:0004560 ... Q8A3I4 25427942
    257393 4pef:A (1.96) BS01 MN 3.1.4.- GO:0000375 ... C4M1P9 25123664
    257394 4pef:B (1.96) BS01 MN 3.1.4.- GO:0000375 ... C4M1P9 25123664
    257395 4pef:C (1.96) BS01 MN 3.1.4.- GO:0000375 ... C4M1P9 25123664
    257396 4pef:D (1.96) BS01 MN 3.1.4.- GO:0000375 ... C4M1P9 25123664
    257397 4pef:E (1.96) BS01 MN 3.1.4.- GO:0000375 ... C4M1P9 25123664
    257398 4peg:A (2.0) BS01 MN 3.1.4.- GO:0000375 ... C4M1P9 25123664
    257399 4peg:A (2.0) BS02 5GP 3.1.4.- GO:0000375 ... C4M1P9 25123664
    257400 4peg:B (2.0) BS01 MN 3.1.4.- GO:0000375 ... C4M1P9 25123664

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).