SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    257401 4peg:B (2.0) BS02 5GP 3.1.4.- GO:0000375 ... C4M1P9 25123664
    257402 4peg:C (2.0) BS01 MN 3.1.4.- GO:0000375 ... C4M1P9 25123664
    257403 4peg:C (2.0) BS02 5GP 3.1.4.- GO:0000375 ... C4M1P9 25123664
    257404 4peg:D (2.0) BS01 MN 3.1.4.- GO:0000375 ... C4M1P9 25123664
    257405 4peg:D (2.0) BS02 5GP 3.1.4.- GO:0000375 ... C4M1P9 25123664
    257406 4peg:E (2.0) BS01 MN 3.1.4.- GO:0000375 ... C4M1P9 25123664
    257407 4peg:E (2.0) BS02 5GP 3.1.4.- GO:0000375 ... C4M1P9 25123664
    257408 4peh:A (2.1) BS01 rna 3.1.4.- GO:0000375 ... C4M1P9 25123664
    257409 4peh:A (2.1) BS02 MN 3.1.4.- GO:0000375 ... C4M1P9 25123664
    257410 4peh:B (2.1) BS01 rna 3.1.4.- GO:0000375 ... C4M1P9 25123664
    257411 4peh:B (2.1) BS02 MN 3.1.4.- GO:0000375 ... C4M1P9 25123664
    257412 4peh:C (2.1) BS01 rna 3.1.4.- GO:0000375 ... C4M1P9 25123664
    257413 4peh:C (2.1) BS02 MN 3.1.4.- GO:0000375 ... C4M1P9 25123664
    257414 4peh:D (2.1) BS01 rna 3.1.4.- GO:0000375 ... C4M1P9 25123664
    257415 4peh:D (2.1) BS02 MN 3.1.4.- GO:0000375 ... C4M1P9 25123664
    257416 4peh:E (2.1) BS01 rna 3.1.4.- GO:0000375 ... C4M1P9 25123664
    257417 4peh:E (2.1) BS02 MN 3.1.4.- GO:0000375 ... C4M1P9 25123664
    257418 4pei:A (1.95) BS01 rna 3.1.4.- GO:0000375 ... C4M1P9 25123664
    257419 4pei:A (1.95) BS02 rna 3.1.4.- GO:0000375 ... C4M1P9 25123664
    257420 4pei:B (1.95) BS01 rna 3.1.4.- GO:0000375 ... C4M1P9 25123664
    257421 4pei:B (1.95) BS02 rna 3.1.4.- GO:0000375 ... C4M1P9 25123664
    257422 4pei:C (1.95) BS01 rna 3.1.4.- GO:0000375 ... C4M1P9 25123664
    257423 4pei:D (1.95) BS01 rna 3.1.4.- GO:0000375 ... C4M1P9 25123664
    257424 4pei:D (1.95) BS02 dna 3.1.4.- GO:0000375 ... C4M1P9 25123664
    257425 4pei:E (1.95) BS01 rna 3.1.4.- GO:0000375 ... C4M1P9 25123664
    257426 4pel:B (2.8) BS01 CA 3.5.1.11 GO:0016787 ... A0A068F6N5 N/A
    257427 4pel:D (2.8) BS01 CA 3.5.1.11 GO:0016787 ... A0A068F6N5 N/A
    257428 4pel:F (2.8) BS01 CA 3.5.1.11 GO:0016787 ... A0A068F6N5 N/A
    257429 4pel:H (2.8) BS01 CA 3.5.1.11 GO:0016787 ... A0A068F6N5 N/A
    257430 4pem:B (2.5) BS01 CA ? GO:0016787 ... A0A068F6N5 N/A
    257431 4pes:A (2.21) BS01 peptide 3.4.24.56 GO:0001540 ... P14735 N/A
    257432 4pes:A (2.21) BS02 2PJ 3.4.24.56 GO:0001540 ... P14735 N/A
    257433 4pes:A (2.21) BS03 ZN 3.4.24.56 GO:0001540 ... P14735 N/A
    257434 4pes:B (2.21) BS01 peptide 3.4.24.56 GO:0001540 ... P14735 N/A
    257435 4pes:B (2.21) BS02 2PJ 3.4.24.56 GO:0001540 ... P14735 N/A
    257436 4pes:B (2.21) BS03 ZN 3.4.24.56 GO:0001540 ... P14735 N/A
    257437 4pet:A (1.9) BS01 PYR ? GO:0031317 ... Q48AL6 25540822
    257438 4pet:A (1.9) BS02 CA ? GO:0031317 ... Q48AL6 25540822
    257439 4pet:B (1.9) BS01 PYR ? GO:0031317 ... Q48AL6 25540822
    257440 4pet:B (1.9) BS02 CA ? GO:0031317 ... Q48AL6 25540822
    257441 4peu:A (1.8001) BS01 CA ? N/A A3DHD2 25286843
    257442 4peu:A (1.8001) BS02 CA ? N/A A3DHD2 25286843
    257443 4peu:A (1.8001) BS03 CA ? N/A A3DHD2 25286843
    257444 4pev:A (2.58) BS01 ADN ? GO:0005886 ... Q9Y8P1 N/A
    257445 4pev:B (2.58) BS01 ADN ? GO:0005886 ... Q9Y8P1 N/A
    257446 4pev:C (2.58) BS01 ADN ? GO:0005886 ... Q9Y8P1 N/A
    257447 4pex:B (1.75) BS01 BGC 3.2.1.58 GO:0004338 ... G2NFJ9 25752603
    257448 4pey:A (1.5) BS01 BGC 3.2.1.58 GO:0004338 ... G2NFJ9 25752603
    257449 4pey:A (1.5) BS02 BGC 3.2.1.58 GO:0004338 ... G2NFJ9 25752603
    257450 4pey:A (1.5) BS03 BGC 3.2.1.58 GO:0004338 ... G2NFJ9 25752603
    257451 4pey:A (1.5) BS04 BGC 3.2.1.58 GO:0004338 ... G2NFJ9 25752603
    257452 4pey:A (1.5) BS05 BGC 3.2.1.58 GO:0004338 ... G2NFJ9 25752603
    257453 4pey:A (1.5) BS06 BGC 3.2.1.58 GO:0004338 ... G2NFJ9 25752603
    257454 4pez:A (1.9) BS01 BGC 3.2.1.58 GO:0004338 ... G2NFJ9 25752603
    257455 4pez:A (1.9) BS02 BGC 3.2.1.58 GO:0004338 ... G2NFJ9 25752603
    257456 4pez:A (1.9) BS03 BGC 3.2.1.58 GO:0004338 ... G2NFJ9 25752603
    257457 4pez:A (1.9) BS04 BGC 3.2.1.58 GO:0004338 ... G2NFJ9 25752603
    257458 4pf0:A (1.75) BS01 BGC 3.2.1.58 GO:0004338 ... G2NFJ9 25752603
    257459 4pf0:A (1.75) BS02 BGC 3.2.1.58 GO:0004338 ... G2NFJ9 25752603
    257460 4pf0:A (1.75) BS03 BGC 3.2.1.58 GO:0004338 ... G2NFJ9 25752603
    257461 4pf0:A (1.75) BS04 BGC 3.2.1.58 GO:0004338 ... G2NFJ9 25752603
    257462 4pf0:A (1.75) BS05 BGC 3.2.1.58 GO:0004338 ... G2NFJ9 25752603
    257463 4pf0:A (1.75) BS06 BGC 3.2.1.58 GO:0004338 ... G2NFJ9 25752603
    257464 4pf0:A (1.75) BS07 BGC 3.2.1.58 GO:0004338 ... G2NFJ9 25752603
    257465 4pf0:A (1.75) BS08 BGC 3.2.1.58 GO:0004338 ... G2NFJ9 25752603
    257466 4pf0:B (1.75) BS01 BGC 3.2.1.58 GO:0004338 ... G2NFJ9 25752603
    257467 4pf0:B (1.75) BS02 BGC 3.2.1.58 GO:0004338 ... G2NFJ9 25752603
    257468 4pf0:B (1.75) BS03 BGC 3.2.1.58 GO:0004338 ... G2NFJ9 25752603
    257469 4pf0:B (1.75) BS04 BGC 3.2.1.58 GO:0004338 ... G2NFJ9 25752603
    257470 4pf0:B (1.75) BS05 BGC 3.2.1.58 GO:0004338 ... G2NFJ9 25752603
    257471 4pf0:B (1.75) BS06 BGC 3.2.1.58 GO:0004338 ... G2NFJ9 25752603
    257472 4pf0:B (1.75) BS07 BGC 3.2.1.58 GO:0004338 ... G2NFJ9 25752603
    257473 4pf0:B (1.75) BS08 BGC 3.2.1.58 GO:0004338 ... G2NFJ9 25752603
    257474 4pf3:A (1.1) BS01 HFN ? N/A P08235 25187277 MOAD: ic50=51nM
    257475 4pf4:A (1.13) BS01 MG 2.7.11.1 GO:0004672 ... P53355 N/A
    257476 4pf5:A (2.04) BS01 MN ? GO:0030246 ... P02866 25483029
    257477 4pf5:A (2.04) BS02 MN ? GO:0030246 ... P02866 25483029
    257478 4pf5:A (2.04) BS03 M3N ? GO:0030246 ... P02866 25483029
    257479 4pf5:B (2.04) BS01 M3N ? GO:0030246 ... P02866 25483029
    257480 4pf5:B (2.04) BS02 MN ? GO:0030246 ... P02866 25483029
    257481 4pf5:B (2.04) BS03 MN ? GO:0030246 ... P02866 25483029
    257482 4pf7:A (2.33) BS01 2QW 3.4.24.56 GO:0001540 ... P14735 26085101 MOAD: ic50=2000nM
    257483 4pf7:A (2.33) BS02 ZN 3.4.24.56 GO:0001540 ... P14735 26085101
    257484 4pf7:B (2.33) BS01 2QW 3.4.24.56 GO:0001540 ... P14735 26085101 MOAD: ic50=2000nM
    257485 4pf7:B (2.33) BS02 ZN 3.4.24.56 GO:0001540 ... P14735 26085101
    257486 4pf8:A (1.5) BS01 GTR N/A GO:0030288 ... N/A 25540822
    257487 4pf8:B (1.5) BS01 GTR N/A GO:0030288 ... N/A 25540822
    257488 4pf9:A (2.5) BS01 2Q6 3.4.24.56 GO:0001540 ... P14735 26085101 MOAD: ic50=4nM
    BindingDB: IC50=4.0nM
    257489 4pf9:A (2.5) BS02 ZN 3.4.24.56 GO:0001540 ... P14735 26085101
    257490 4pf9:B (2.5) BS01 2Q6 3.4.24.56 GO:0001540 ... P14735 26085101 MOAD: ic50=4nM
    BindingDB: IC50=4.0nM
    257491 4pf9:B (2.5) BS02 ZN 3.4.24.56 GO:0001540 ... P14735 26085101
    257492 4pfa:A (2.56) BS01 FAD 1.1.98.3 GO:0003885 ... P9WJF1 N/A
    257493 4pfa:A (2.56) BS02 N77 1.1.98.3 GO:0003885 ... P9WJF1 N/A
    257494 4pfa:B (2.56) BS01 FAD 1.1.98.3 GO:0003885 ... P9WJF1 N/A
    257495 4pfa:B (2.56) BS02 N77 1.1.98.3 GO:0003885 ... P9WJF1 N/A
    257496 4pfb:A (2.7) BS01 G3P ? GO:0055085 ... Q8RE65 25540822
    257497 4pfc:A (2.21) BS01 2QX 3.4.24.56 GO:0001540 ... P14735 26085101 MOAD: ic50=4nM
    257498 4pfc:A (2.21) BS02 ZN 3.4.24.56 GO:0001540 ... P14735 26085101
    257499 4pfc:B (2.21) BS01 2QX 3.4.24.56 GO:0001540 ... P14735 26085101 MOAD: ic50=4nM
    257500 4pfc:B (2.21) BS02 ZN 3.4.24.56 GO:0001540 ... P14735 26085101
    257501 4pfd:A (2.3) BS01 FAD 1.1.98.3 GO:0003885 ... P9WJF1 N/A
    257502 4pfd:A (2.3) BS02 2R2 1.1.98.3 GO:0003885 ... P9WJF1 N/A
    257503 4pfd:B (2.3) BS01 FAD 1.1.98.3 GO:0003885 ... P9WJF1 N/A
    257504 4pfd:B (2.3) BS02 2R2 1.1.98.3 GO:0003885 ... P9WJF1 N/A
    257505 4pff:A (2.3) BS01 PLP 2.1.2.1 GO:0004372 ... A5K8L9 25478836
    257506 4pff:B (2.3) BS01 PLP 2.1.2.1 GO:0004372 ... A5K8L9 25478836
    257507 4pff:C (2.3) BS01 PLP 2.1.2.1 GO:0004372 ... A5K8L9 25478836
    257508 4pfh:A (1.9) BS01 MN 5.1.3.31 N/A O50580 25655925
    257509 4pfh:A (1.9) BS02 PSJ 5.1.3.31 N/A O50580 25655925
    257510 4pfh:A (1.9) BS03 FUD 5.1.3.31 N/A O50580 25655925
    257511 4pfh:B (1.9) BS01 MN 5.1.3.31 N/A O50580 25655925
    257512 4pfh:B (1.9) BS02 PSJ 5.1.3.31 N/A O50580 25655925
    257513 4pfh:B (1.9) BS03 FUD 5.1.3.31 N/A O50580 25655925
    257514 4pfj:A (2.3) BS01 NAD 3.13.2.1 GO:0004013 ... P23526 25248746
    257515 4pfj:A (2.3) BS02 ADN 3.13.2.1 GO:0004013 ... P23526 25248746
    257516 4pfj:B (2.3) BS01 NAD 3.13.2.1 GO:0004013 ... P23526 25248746
    257517 4pfj:B (2.3) BS02 ADN 3.13.2.1 GO:0004013 ... P23526 25248746
    257518 4pfk:A (2.4) BS01 F6P 2.7.1.11 GO:0003872 ... P00512 6115424
    257519 4pfk:A (2.4) BS02 MG 2.7.1.11 GO:0003872 ... P00512 6115424
    257520 4pfk:A (2.4) BS03 ADP 2.7.1.11 GO:0003872 ... P00512 6115424
    257521 4pfk:A (2.4) BS04 ADP 2.7.1.11 GO:0003872 ... P00512 6115424
    257522 4pfm:A (2.327) BS01 LYS 4.3.3.7 GO:0005737 ... A9DKW4 N/A
    257523 4pfm:A (2.327) BS02 LYS 4.3.3.7 GO:0005737 ... A9DKW4 N/A
    257524 4pfm:B (2.327) BS01 LYS 4.3.3.7 GO:0005737 ... A9DKW4 N/A
    257525 4pfm:B (2.327) BS02 LYS 4.3.3.7 GO:0005737 ... A9DKW4 N/A
    257526 4pfm:B (2.327) BS03 LYS 4.3.3.7 GO:0005737 ... A9DKW4 N/A
    257527 4pfn:A (2.5) BS01 PLP 2.1.2.1 GO:0004372 ... A5K8L9 25478836
    257528 4pfn:A (2.5) BS02 SER 2.1.2.1 GO:0004372 ... A5K8L9 25478836
    257529 4pfn:A (2.5) BS03 SER 2.1.2.1 GO:0004372 ... A5K8L9 25478836
    257530 4pfn:B (2.5) BS01 SER 2.1.2.1 GO:0004372 ... A5K8L9 25478836
    257531 4pfn:B (2.5) BS02 PLP 2.1.2.1 GO:0004372 ... A5K8L9 25478836
    257532 4pfn:B (2.5) BS03 SER 2.1.2.1 GO:0004372 ... A5K8L9 25478836
    257533 4pfn:C (2.5) BS01 PLP 2.1.2.1 GO:0004372 ... A5K8L9 25478836
    257534 4pfn:C (2.5) BS02 SER 2.1.2.1 GO:0004372 ... A5K8L9 25478836
    257535 4pfo:A (1.75) BS01 MG ? GO:0003774 ... F1RQI7 25936506
    257536 4pfo:A (1.75) BS02 ADP ? GO:0003774 ... F1RQI7 25936506
    257537 4pfp:A (2.32) BS01 MG ? GO:0003774 ... F1RQI7 25936506
    257538 4pfp:A (2.32) BS02 ADP ? GO:0003774 ... F1RQI7 25936506
    257539 4pfp:A (2.32) BS03 PO4 ? GO:0003774 ... F1RQI7 25936506
    257540 4pfp:A (2.32) BS04 PO4 ? GO:0003774 ... F1RQI7 25936506
    257541 4pfp:C (2.32) BS01 ADP ? GO:0003774 ... F1RQI7 25936506
    257542 4pfp:C (2.32) BS02 PO4 ? GO:0003774 ... F1RQI7 25936506
    257543 4pfp:C (2.32) BS03 MG ? GO:0003774 ... F1RQI7 25936506
    257544 4pfq:A (2.1) BS01 MG 2.4.2.8 GO:0000287 ... C7MC15 N/A
    257545 4pfq:B (2.1) BS01 MG 2.4.2.8 GO:0000287 ... C7MC15 N/A
    257546 4pfq:C (2.1) BS01 MG 2.4.2.8 GO:0000287 ... C7MC15 N/A
    257547 4pfq:D (2.1) BS01 MG 2.4.2.8 GO:0000287 ... C7MC15 N/A
    257548 4pfq:E (2.1) BS01 MG 2.4.2.8 GO:0000287 ... C7MC15 N/A
    257549 4pfq:F (2.1) BS01 MG 2.4.2.8 GO:0000287 ... C7MC15 N/A
    257550 4pfq:G (2.1) BS01 MG 2.4.2.8 GO:0000287 ... C7MC15 N/A
    257551 4pfq:H (2.1) BS01 MG 2.4.2.8 GO:0000287 ... C7MC15 N/A
    257552 4pft:A (1.747) BS01 BMA ? GO:0015833 ... Q9X0V0 25210043
    257553 4pft:A (1.747) BS02 BMA ? GO:0015833 ... Q9X0V0 25210043
    257554 4pft:A (1.747) BS03 MG ? GO:0015833 ... Q9X0V0 25210043
    257555 4pft:B (1.747) BS01 BMA ? GO:0015833 ... Q9X0V0 25210043
    257556 4pft:B (1.747) BS02 BMA ? GO:0015833 ... Q9X0V0 25210043
    257557 4pft:B (1.747) BS03 MG ? GO:0015833 ... Q9X0V0 25210043
    257558 4pfu:A (2.049) BS01 BMA N/A GO:0043190 ... N/A 25210043
    257559 4pfu:A (2.049) BS02 BMA N/A GO:0043190 ... N/A 25210043
    257560 4pfu:A (2.049) BS03 MG N/A GO:0043190 ... N/A 25210043
    257561 4pfu:B (2.049) BS01 BMA N/A GO:0043190 ... N/A 25210043
    257562 4pfu:B (2.049) BS02 BMA N/A GO:0043190 ... N/A 25210043
    257563 4pfu:B (2.049) BS03 MG N/A GO:0043190 ... N/A 25210043
    257564 4pfw:A (2.198) BS01 MAN N/A GO:0043190 ... N/A 25210043
    257565 4pfw:A (2.198) BS02 BMA N/A GO:0043190 ... N/A 25210043
    257566 4pfw:A (2.198) BS03 BMA N/A GO:0043190 ... N/A 25210043
    257567 4pfw:A (2.198) BS04 BMA N/A GO:0043190 ... N/A 25210043
    257568 4pfw:A (2.198) BS05 MG N/A GO:0043190 ... N/A 25210043
    257569 4pfw:B (2.198) BS01 MAN N/A GO:0043190 ... N/A 25210043
    257570 4pfw:B (2.198) BS02 BMA N/A GO:0043190 ... N/A 25210043
    257571 4pfw:B (2.198) BS03 BMA N/A GO:0043190 ... N/A 25210043
    257572 4pfw:B (2.198) BS04 BMA N/A GO:0043190 ... N/A 25210043
    257573 4pfw:B (2.198) BS05 BMA N/A GO:0043190 ... N/A 25210043
    257574 4pfw:B (2.198) BS06 MG N/A GO:0043190 ... N/A 25210043
    257575 4pfx:A (1.66) BS01 UDP ? N/A I1ZPA1 25023666
    257576 4pfy:A (1.5) BS01 BMA ? GO:0015833 ... Q9X0V0 25210043
    257577 4pfy:A (1.5) BS02 BMA ? GO:0015833 ... Q9X0V0 25210043
    257578 4pfy:A (1.5) BS03 BMA ? GO:0015833 ... Q9X0V0 25210043
    257579 4pfy:A (1.5) BS04 BMA ? GO:0015833 ... Q9X0V0 25210043
    257580 4pfy:A (1.5) BS05 BMA ? GO:0015833 ... Q9X0V0 25210043
    257581 4pfy:A (1.5) BS06 BMA ? GO:0015833 ... Q9X0V0 25210043
    257582 4pfy:A (1.5) BS07 MG ? GO:0015833 ... Q9X0V0 25210043
    257583 4pfy:B (1.5) BS01 BMA ? GO:0015833 ... Q9X0V0 25210043
    257584 4pfy:B (1.5) BS02 BMA ? GO:0015833 ... Q9X0V0 25210043
    257585 4pfy:B (1.5) BS03 BMA ? GO:0015833 ... Q9X0V0 25210043
    257586 4pfy:B (1.5) BS04 BMA ? GO:0015833 ... Q9X0V0 25210043
    257587 4pfy:B (1.5) BS05 BMA ? GO:0015833 ... Q9X0V0 25210043
    257588 4pfy:B (1.5) BS06 BMA ? GO:0015833 ... Q9X0V0 25210043
    257589 4pfy:B (1.5) BS07 MG ? GO:0015833 ... Q9X0V0 25210043
    257590 4pg0:A (1.9) BS01 FE 4.1.99.5 GO:0046914 ... Q7V6D4 25222710
    257591 4pg0:A (1.9) BS02 FE 4.1.99.5 GO:0046914 ... Q7V6D4 25222710
    257592 4pg0:A (1.9) BS03 Y39 4.1.99.5 GO:0046914 ... Q7V6D4 25222710
    257593 4pg1:A (1.7) BS01 FE 4.1.99.5 GO:0046914 ... Q7V6D4 25222710
    257594 4pg1:A (1.7) BS02 FE 4.1.99.5 GO:0046914 ... Q7V6D4 25222710
    257595 4pg1:A (1.7) BS03 Y39 4.1.99.5 GO:0046914 ... Q7V6D4 25222710
    257596 4pg1:A (1.7) BS04 Y39 4.1.99.5 GO:0046914 ... Q7V6D4 25222710
    257597 4pg2:A (2.8) BS01 peptide ? N/A P01899 25135637
    257598 4pg2:A (2.8) BS02 GSH ? N/A P01899 25135637
    257599 4pg3:A (2.696) BS01 LYS 6.1.1.6 GO:0000166 ... Q8IDJ8 24935905
    257600 4pg3:A (2.696) BS02 KRS 6.1.1.6 GO:0000166 ... Q8IDJ8 24935905 BindingDB: IC50=120nM

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).