SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    260201 4q5s:C (3.0) BS01 dna 2.7.7.6 GO:0003677 ... Q8RQE9 24973216
    260202 4q5s:C (3.0) BS02 dna 2.7.7.6 GO:0003677 ... Q8RQE9 24973216
    260203 4q5s:C (3.0) BS03 rna 2.7.7.6 GO:0003677 ... Q8RQE9 24973216
    260204 4q5s:D (3.0) BS01 dna 2.7.7.6 GO:0000287 ... Q8RQE8 24973216
    260205 4q5s:D (3.0) BS02 dna 2.7.7.6 GO:0000287 ... Q8RQE8 24973216
    260206 4q5s:D (3.0) BS03 rna 2.7.7.6 GO:0000287 ... Q8RQE8 24973216
    260207 4q5s:D (3.0) BS04 MG 2.7.7.6 GO:0000287 ... Q8RQE8 24973216
    260208 4q5s:D (3.0) BS05 ZN 2.7.7.6 GO:0000287 ... Q8RQE8 24973216
    260209 4q5s:D (3.0) BS06 ZN 2.7.7.6 GO:0000287 ... Q8RQE8 24973216
    260210 4q5s:F (3.0) BS01 dna ? GO:0003677 ... Q5SKW1 24973216
    260211 4q5u:A (1.95) BS01 peptide ? GO:0000922 ... P0DP23 25144868
    260212 4q5u:A (1.95) BS02 CA ? GO:0000922 ... P0DP23 25144868
    260213 4q5u:A (1.95) BS03 CA ? GO:0000922 ... P0DP23 25144868
    260214 4q5u:A (1.95) BS04 CA ? GO:0000922 ... P0DP23 25144868
    260215 4q5u:A (1.95) BS05 CA ? GO:0000922 ... P0DP23 25144868
    260216 4q5v:A (2.52) BS01 rna 2.7.7.7 GO:0000166 ... P09884 25429975
    260217 4q5v:A (2.52) BS02 dna 2.7.7.7 GO:0000166 ... P09884 25429975
    260218 4q5v:A (2.52) BS03 2ZE 2.7.7.7 GO:0000166 ... P09884 25429975 BindingDB: IC50=4300nM, EC50=2000nM
    260219 4q5v:E (2.52) BS01 rna 2.7.7.7 GO:0000166 ... P09884 25429975
    260220 4q5v:E (2.52) BS02 dna 2.7.7.7 GO:0000166 ... P09884 25429975
    260221 4q5v:E (2.52) BS03 2ZE 2.7.7.7 GO:0000166 ... P09884 25429975 BindingDB: IC50=4300nM, EC50=2000nM
    260222 4q60:A (2.1) BS01 PYC 5.1.1.8 GO:0047580 ... B3D6W2 N/A
    260223 4q60:B (2.1) BS01 PYC 5.1.1.8 GO:0047580 ... B3D6W2 N/A
    260224 4q66:C (3.354) BS01 GNP 3.6.5.2 GO:0003924 ... P11076 25203211
    260225 4q66:C (3.354) BS02 MG 3.6.5.2 GO:0003924 ... P11076 25203211
    260226 4q66:F (3.354) BS01 GNP 3.6.5.2 GO:0003924 ... P11076 25203211
    260227 4q66:F (3.354) BS02 MG 3.6.5.2 GO:0003924 ... P11076 25203211
    260228 4q66:I (3.354) BS01 GNP 3.6.5.2 GO:0003924 ... P11076 25203211
    260229 4q66:L (3.354) BS01 GNP 3.6.5.2 GO:0003924 ... P11076 25203211
    260230 4q66:L (3.354) BS02 MG 3.6.5.2 GO:0003924 ... P11076 25203211
    260231 4q67:A (2.04) BS01 NAP N/A GO:0004146 ... N/A 25552560
    260232 4q6a:A (2.099) BS01 NAP N/A GO:0004146 ... N/A 25552560
    260233 4q6b:A (1.667) BS01 LEU ? GO:0006865 ... B8FZ96 N/A
    260234 4q6b:A (1.667) BS02 CA ? GO:0006865 ... B8FZ96 N/A
    260235 4q6d:A (1.12) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 25353386
    260236 4q6d:A (1.12) BS02 WW3 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 25353386 MOAD: Kd=0.0435uM
    260237 4q6e:A (1.12) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 25353386
    260238 4q6e:A (1.12) BS02 KR5 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 25353386 MOAD: Kd=0.667uM
    260239 4q6f:A (1.91) BS01 peptide ? N/A Q9UIF9 25533489
    260240 4q6f:A (1.91) BS02 ZN ? N/A Q9UIF9 25533489
    260241 4q6f:A (1.91) BS03 ZN ? N/A Q9UIF9 25533489
    260242 4q6f:B (1.91) BS01 peptide ? N/A Q9UIF9 25533489
    260243 4q6f:B (1.91) BS02 ZN ? N/A Q9UIF9 25533489
    260244 4q6f:B (1.91) BS03 ZN ? N/A Q9UIF9 25533489
    260245 4q6f:C (1.91) BS01 peptide ? N/A Q9UIF9 25533489
    260246 4q6f:C (1.91) BS02 ZN ? N/A Q9UIF9 25533489
    260247 4q6f:C (1.91) BS03 ZN ? N/A Q9UIF9 25533489
    260248 4q6f:D (1.91) BS01 ZN ? N/A Q9UIF9 25533489
    260249 4q6f:D (1.91) BS02 ZN ? N/A Q9UIF9 25533489
    260250 4q6g:A (2.25) BS01 ANP 6.1.1.26 GO:0000049 ... Q8PWY1 25385624
    260251 4q6g:A (2.25) BS02 ALY 6.1.1.26 GO:0000049 ... Q8PWY1 25385624
    260252 4q6h:A (1.903) BS01 peptide ? GO:0005794 ... Q9HD26 N/A
    260253 4q6h:A (1.903) BS02 SO3 ? GO:0005794 ... Q9HD26 N/A
    260254 4q6m:A (1.6) BS01 CA ? N/A O25708 25372672
    260255 4q6m:A (1.6) BS02 CA ? N/A O25708 25372672
    260256 4q6m:A (1.6) BS03 CA ? N/A O25708 25372672
    260257 4q6n:A (1.55) BS01 MHI ? N/A O25708 25372672
    260258 4q6n:A (1.55) BS02 CA ? N/A O25708 25372672
    260259 4q6n:A (1.55) BS03 CA ? N/A O25708 25372672
    260260 4q6n:A (1.55) BS04 CA ? N/A O25708 25372672
    260261 4q6o:A (1.41) BS01 CA ? N/A O25708 25372672
    260262 4q6o:A (1.41) BS02 CA ? N/A O25708 25372672
    260263 4q6o:A (1.41) BS03 CA ? N/A O25708 25372672
    260264 4q6o:A (1.41) BS04 API ? N/A O25708 25372672
    260265 4q6p:A (2.62) BS01 ZN ? N/A O25708 25372672
    260266 4q6p:A (2.62) BS02 ZN ? N/A O25708 25372672
    260267 4q6p:A (2.62) BS03 ZN ? N/A O25708 25372672
    260268 4q6p:A (2.62) BS04 CA ? N/A O25708 25372672
    260269 4q6p:A (2.62) BS05 API ? N/A O25708 25372672
    260270 4q6q:A (2.4) BS01 ZN ? N/A O25708 25372672
    260271 4q6q:A (2.4) BS02 CA ? N/A O25708 25372672
    260272 4q6q:A (2.4) BS03 API ? N/A O25708 25372672
    260273 4q6r:A (2.4) BS01 30J 4.1.2.27 GO:0016830 ... O95470 24809814 MOAD: ic50=0.21uM
    BindingDB: IC50=210nM
    260274 4q6r:A (2.4) BS02 30J 4.1.2.27 GO:0016830 ... O95470 24809814 MOAD: ic50=0.21uM
    BindingDB: IC50=210nM
    260275 4q6r:B (2.4) BS01 30J 4.1.2.27 GO:0016830 ... O95470 24809814 MOAD: ic50=0.21uM
    BindingDB: IC50=210nM
    260276 4q6r:B (2.4) BS02 PO4 4.1.2.27 GO:0016830 ... O95470 24809814
    260277 4q6r:B (2.4) BS03 30J 4.1.2.27 GO:0016830 ... O95470 24809814 MOAD: ic50=0.21uM
    BindingDB: IC50=210nM
    260278 4q6s:A (1.45) BS01 peptide ? GO:0005794 ... Q9HD26 41419168
    260279 4q6s:A (1.45) BS02 peptide ? GO:0005794 ... Q9HD26 41419168
    260280 4q6s:B (1.45) BS01 peptide ? GO:0005794 ... Q9HD26 41419168
    260281 4q6w:A (1.84) BS01 3HB ? GO:0006865 ... Q7VS30 N/A
    260282 4q6w:B (1.84) BS01 3HB ? GO:0006865 ... Q7VS30 N/A
    260283 4q6x:A (2.14) BS01 MG 4.6.1.- GO:0005576 ... A0A0D4WV12 25752604
    260284 4q6y:A (3.0) BS01 BMA ? N/A P01857 25036289
    260285 4q6y:B (3.0) BS01 BMA ? N/A P01857 25036289
    260286 4q6y:B (3.0) BS02 GAL ? N/A P01857 25036289
    260287 4q6y:C (3.0) BS01 GAL ? N/A P01857 25036289
    260288 4q6y:D (3.0) BS01 GAL ? N/A P01857 25036289
    260289 4q71:A (2.2) BS01 FAD 1.2.1.88
    1.5.5.2
    GO:0003700 ... Q89E26 25046425
    260290 4q71:B (2.2) BS01 FAD 1.2.1.88
    1.5.5.2
    GO:0003700 ... Q89E26 25046425
    260291 4q72:A (2.3) BS01 FAD 1.2.1.88
    1.5.5.2
    GO:0003700 ... Q89E26 25046425
    260292 4q72:B (2.3) BS01 FAD 1.2.1.88
    1.5.5.2
    GO:0003700 ... Q89E26 25046425
    260293 4q73:A (2.3) BS01 FAD 1.2.1.88
    1.5.5.2
    GO:0003700 ... Q89E26 25046425
    260294 4q73:B (2.3) BS01 FAD 1.2.1.88
    1.5.5.2
    GO:0003700 ... Q89E26 25046425
    260295 4q74:A (2.19) BS01 GAL ? N/A P01857 25036289
    260296 4q74:B (2.19) BS01 GAL ? N/A P01857 25036289
    260297 4q78:A (1.0) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 25309911
    260298 4q78:A (1.0) BS02 25X 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 25309911
    260299 4q7b:A (1.19) BS01 NAP 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 N/A
    260300 4q7b:A (1.19) BS02 2YZ 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 N/A
    260301 4q7c:A (3.102) BS01 CA ? GO:0008654 ... O27985 24923293
    260302 4q7c:A (3.102) BS02 CA ? GO:0008654 ... O27985 24923293
    260303 4q7c:A (3.102) BS03 MPG ? GO:0008654 ... O27985 24923293
    260304 4q7c:A (3.102) BS04 C2G ? GO:0008654 ... O27985 24923293
    260305 4q7c:B (3.102) BS01 CA ? GO:0008654 ... O27985 24923293
    260306 4q7c:B (3.102) BS02 CA ? GO:0008654 ... O27985 24923293
    260307 4q7c:B (3.102) BS03 C2G ? GO:0008654 ... O27985 24923293
    260308 4q7d:A (2.35) BS01 BMA ? N/A P01857 25036289
    260309 4q7d:A (2.35) BS02 MAN ? N/A P01857 25036289
    260310 4q7d:B (2.35) BS01 BMA ? N/A P01857 25036289
    260311 4q7f:A (1.98) BS01 MG ? GO:0000166 ... Q2G1L5 N/A
    260312 4q7f:A (1.98) BS02 MN ? GO:0000166 ... Q2G1L5 N/A
    260313 4q7f:A (1.98) BS03 3D1 ? GO:0000166 ... Q2G1L5 N/A
    260314 4q7h:A (2.587) BS01 ZN 3.1.5.- N/A Q9Y3Z3 N/A
    260315 4q7h:A (2.587) BS02 GTP 3.1.5.- N/A Q9Y3Z3 N/A
    260316 4q7h:A (2.587) BS03 GTP 3.1.5.- N/A Q9Y3Z3 N/A
    260317 4q7h:B (2.587) BS01 GTP 3.1.5.- N/A Q9Y3Z3 N/A
    260318 4q7h:B (2.587) BS02 ZN 3.1.5.- N/A Q9Y3Z3 N/A
    260319 4q7h:B (2.587) BS03 GTP 3.1.5.- N/A Q9Y3Z3 N/A
    260320 4q7h:C (2.587) BS01 ZN 3.1.5.- N/A Q9Y3Z3 N/A
    260321 4q7h:C (2.587) BS02 GTP 3.1.5.- N/A Q9Y3Z3 N/A
    260322 4q7h:D (2.587) BS01 GTP 3.1.5.- N/A Q9Y3Z3 N/A
    260323 4q7h:D (2.587) BS02 ZN 3.1.5.- N/A Q9Y3Z3 N/A
    260324 4q7i:A (1.8) BS01 MN ? N/A A0A0A6YVN8 25655925
    260325 4q7i:B (1.8) BS01 MN ? N/A A0A0A6YVN8 25655925
    260326 4q7n:A (1.79) BS01 2ZO ? GO:0005576 ... Q7YS85 N/A
    260327 4q7p:A (1.65) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 25116076
    260328 4q7p:A (1.65) BS02 3MH 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 25116076 MOAD: Ki=48uM
    BindingDB: Ki=48000nM
    260329 4q7r:A (1.4) BS01 ZN ? GO:0008218 ... D0VWW2 24960050
    260330 4q7r:B (1.4) BS01 ZN ? GO:0008218 ... D0VWW2 24960050
    260331 4q7r:B (1.4) BS02 ZN ? GO:0008218 ... D0VWW2 24960050
    260332 4q7s:A (1.8) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 25116076
    260333 4q7s:A (1.8) BS02 2YU 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 25116076 MOAD: Ki=38uM
    BindingDB: Ki=38000nM
    260334 4q7v:A (1.6) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 25116076
    260335 4q7v:A (1.6) BS02 5MH 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 25116076 MOAD: Ki=260uM
    BindingDB: Ki=260000nM
    260336 4q7w:A (1.45) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 25116076
    260337 4q7w:A (1.45) BS02 6MH 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 25116076 MOAD: Ki=2300uM
    BindingDB: Ki=2300000nM
    260338 4q7z:A (1.4) BS01 2YT 3.4.21.- GO:0004252 ... Q6UWY2 25156428
    260339 4q80:A (3.07) BS01 2YS 3.4.21.- GO:0004252 ... Q6UWY2 25156428
    260340 4q80:B (3.07) BS01 2YS 3.4.21.- GO:0004252 ... Q6UWY2 25156428
    260341 4q81:A (1.55) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 25116076
    260342 4q81:A (1.55) BS02 7MH 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 25116076 MOAD: Ki=950uM
    BindingDB: Ki=950000nM
    260343 4q83:A (1.55) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 25116076
    260344 4q83:A (1.55) BS02 3FH 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 25116076 MOAD: Ki=64uM
    BindingDB: Ki=64000nM
    260345 4q85:A (3.29) BS01 APC ? GO:0000287 ... P75838 25129028
    260346 4q85:A (3.29) BS02 MG ? GO:0000287 ... P75838 25129028
    260347 4q85:A (3.29) BS03 MG ? GO:0000287 ... P75838 25129028
    260348 4q85:A (3.29) BS04 MG ? GO:0000287 ... P75838 25129028
    260349 4q85:B (3.29) BS01 APC ? GO:0000287 ... P75838 25129028
    260350 4q85:B (3.29) BS02 MG ? GO:0000287 ... P75838 25129028
    260351 4q85:B (3.29) BS03 MG ? GO:0000287 ... P75838 25129028
    260352 4q85:B (3.29) BS04 MG ? GO:0000287 ... P75838 25129028
    260353 4q85:C (3.29) BS01 MG ? GO:0000287 ... P75838 25129028
    260354 4q85:C (3.29) BS02 MG ? GO:0000287 ... P75838 25129028
    260355 4q85:D (3.29) BS01 APC ? GO:0000287 ... P75838 25129028
    260356 4q85:D (3.29) BS02 MG ? GO:0000287 ... P75838 25129028
    260357 4q85:D (3.29) BS03 MG ? GO:0000287 ... P75838 25129028
    260358 4q85:D (3.29) BS04 MG ? GO:0000287 ... P75838 25129028
    260359 4q85:E (3.29) BS01 APC ? GO:0000287 ... P75838 25129028
    260360 4q85:E (3.29) BS02 MG ? GO:0000287 ... P75838 25129028
    260361 4q85:E (3.29) BS03 MG ? GO:0000287 ... P75838 25129028
    260362 4q85:E (3.29) BS04 MG ? GO:0000287 ... P75838 25129028
    260363 4q85:G (3.29) BS01 MG ? GO:0000287 ... P75838 25129028
    260364 4q85:H (3.29) BS01 APC ? GO:0000287 ... P75838 25129028
    260365 4q85:H (3.29) BS02 MG ? GO:0000287 ... P75838 25129028
    260366 4q85:H (3.29) BS03 MG ? GO:0000287 ... P75838 25129028
    260367 4q85:H (3.29) BS04 MG ? GO:0000287 ... P75838 25129028
    260368 4q85:H (3.29) BS05 MG ? GO:0000287 ... P75838 25129028
    260369 4q86:A (2.25) BS01 AMP ? GO:0000287 ... P75838 25129028
    260370 4q86:A (2.25) BS02 MG ? GO:0000287 ... P75838 25129028
    260371 4q86:B (2.25) BS01 AMP ? GO:0000287 ... P75838 25129028
    260372 4q86:B (2.25) BS02 MG ? GO:0000287 ... P75838 25129028
    260373 4q86:C (2.25) BS01 AMP ? GO:0000287 ... P75838 25129028
    260374 4q86:C (2.25) BS02 MG ? GO:0000287 ... P75838 25129028
    260375 4q86:D (2.25) BS01 AMP ? GO:0000287 ... P75838 25129028
    260376 4q86:D (2.25) BS02 MG ? GO:0000287 ... P75838 25129028
    260377 4q86:E (2.25) BS01 AMP ? GO:0000287 ... P75838 25129028
    260378 4q86:E (2.25) BS02 MG ? GO:0000287 ... P75838 25129028
    260379 4q86:G (2.25) BS01 AMP ? GO:0000287 ... P75838 25129028
    260380 4q86:G (2.25) BS02 MG ? GO:0000287 ... P75838 25129028
    260381 4q86:H (2.25) BS01 AMP ? GO:0000287 ... P75838 25129028
    260382 4q86:H (2.25) BS02 MG ? GO:0000287 ... P75838 25129028
    260383 4q87:A (1.55) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 25116076
    260384 4q87:A (1.55) BS02 4FH 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 25116076 MOAD: Ki=14uM
    BindingDB: Ki=14000nM
    260385 4q89:A (2.31) BS01 CU 1.10.3.2
    1.3.3.5
    GO:0005507 ... P07788 N/A
    260386 4q89:A (2.31) BS02 CU 1.10.3.2
    1.3.3.5
    GO:0005507 ... P07788 N/A
    260387 4q89:A (2.31) BS03 CU 1.10.3.2
    1.3.3.5
    GO:0005507 ... P07788 N/A
    260388 4q89:A (2.31) BS04 CU 1.10.3.2
    1.3.3.5
    GO:0005507 ... P07788 N/A
    260389 4q89:B (2.31) BS01 CU 1.10.3.2
    1.3.3.5
    GO:0005507 ... P07788 N/A
    260390 4q89:B (2.31) BS02 CU 1.10.3.2
    1.3.3.5
    GO:0005507 ... P07788 N/A
    260391 4q89:B (2.31) BS03 CU 1.10.3.2
    1.3.3.5
    GO:0005507 ... P07788 N/A
    260392 4q89:B (2.31) BS04 CU 1.10.3.2
    1.3.3.5
    GO:0005507 ... P07788 N/A
    260393 4q8b:A (1.91) BS01 CU 1.10.3.2
    1.3.3.5
    GO:0005507 ... P07788 N/A
    260394 4q8b:A (1.91) BS02 CU 1.10.3.2
    1.3.3.5
    GO:0005507 ... P07788 N/A
    260395 4q8b:A (1.91) BS03 CU 1.10.3.2
    1.3.3.5
    GO:0005507 ... P07788 N/A
    260396 4q8b:A (1.91) BS04 CU 1.10.3.2
    1.3.3.5
    GO:0005507 ... P07788 N/A
    260397 4q8b:A (1.91) BS05 OXY 1.10.3.2
    1.3.3.5
    GO:0005507 ... P07788 N/A
    260398 4q8b:B (1.91) BS01 CU 1.10.3.2
    1.3.3.5
    GO:0005507 ... P07788 N/A
    260399 4q8b:B (1.91) BS02 CU 1.10.3.2
    1.3.3.5
    GO:0005507 ... P07788 N/A
    260400 4q8b:B (1.91) BS03 CU 1.10.3.2
    1.3.3.5
    GO:0005507 ... P07788 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).