SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    261801 4qnp:B (2.8) BS01 CA 3.2.1.18 GO:0004308 ... D5KL82 25668439
    261802 4qnp:B (2.8) BS02 CA 3.2.1.18 GO:0004308 ... D5KL82 25668439
    261803 4qnq:A (2.3) BS01 1XJ ? GO:0001541 ... P53563 N/A
    261804 4qnq:A (2.3) BS02 1XJ ? GO:0001541 ... P53563 N/A
    261805 4qnq:B (2.3) BS01 1XJ ? GO:0001541 ... P53563 N/A
    261806 4qnq:B (2.3) BS02 1XJ ? GO:0001541 ... P53563 N/A
    261807 4qnq:C (2.3) BS01 1XJ ? GO:0001541 ... P53563 N/A
    261808 4qnq:D (2.3) BS01 1XJ ? GO:0001541 ... P53563 N/A
    261809 4qnq:E (2.3) BS01 1XJ ? GO:0001541 ... P53563 N/A
    261810 4qnq:E (2.3) BS02 1XJ ? GO:0001541 ... P53563 N/A
    261811 4qnq:F (2.3) BS01 1XJ ? GO:0001541 ... P53563 N/A
    261812 4qnq:G (2.3) BS01 1XJ ? GO:0001541 ... P53563 N/A
    261813 4qnq:G (2.3) BS02 1XJ ? GO:0001541 ... P53563 N/A
    261814 4qnq:H (2.3) BS01 1XJ ? GO:0001541 ... P53563 N/A
    261815 4qnq:I (2.3) BS01 1XJ ? GO:0001541 ... P53563 N/A
    261816 4qnq:J (2.3) BS01 1XJ ? GO:0001541 ... P53563 N/A
    261817 4qnq:J (2.3) BS02 1XJ ? GO:0001541 ... P53563 N/A
    261818 4qnq:K (2.3) BS01 1XJ ? GO:0001541 ... P53563 N/A
    261819 4qnq:K (2.3) BS02 1XJ ? GO:0001541 ... P53563 N/A
    261820 4qnq:L (2.3) BS01 1XJ ? GO:0001541 ... P53563 N/A
    261821 4qnr:A (1.539) BS01 ATP ? GO:0005524 ... P37344 25063294
    261822 4qnr:A (1.539) BS02 MG ? GO:0005524 ... P37344 25063294
    261823 4qnu:A (2.6) BS01 GEK 2.5.1.- GO:0002098 ... A1AC32 25855808
    261824 4qnu:B (2.6) BS01 GEK 2.5.1.- GO:0002098 ... A1AC32 25855808
    261825 4qnu:C (2.6) BS01 GEK 2.5.1.- GO:0002098 ... A1AC32 25855808
    261826 4qnu:D (2.6) BS01 GEK 2.5.1.- GO:0002098 ... A1AC32 25855808
    261827 4qnu:E (2.6) BS01 GEK 2.5.1.- GO:0002098 ... A1AC32 25855808
    261828 4qnu:F (2.6) BS01 GEK 2.5.1.- GO:0002098 ... A1AC32 25855808
    261829 4qnu:G (2.6) BS01 GEK 2.5.1.- GO:0002098 ... A1AC32 25855808
    261830 4qnu:H (2.6) BS01 GEK 2.5.1.- GO:0002098 ... A1AC32 25855808
    261831 4qnv:A (2.64) BS01 GEK 2.5.1.- GO:0002098 ... A1AC32 25855808
    261832 4qnv:B (2.64) BS01 GEK 2.5.1.- GO:0002098 ... A1AC32 25855808
    261833 4qnw:A (1.8) BS01 FMN 1.3.1.100 GO:0003959 ... Q4WZ70 25286934
    261834 4qny:A (2.257) BS01 MG ? GO:0004672 ... A0A3Q8ITZ9 N/A
    261835 4qny:A (2.257) BS02 ANP ? GO:0004672 ... A0A3Q8ITZ9 N/A
    261836 4qny:B (2.257) BS01 MG ? GO:0004672 ... A0A3Q8ITZ9 N/A
    261837 4qny:B (2.257) BS02 ANP ? GO:0004672 ... A0A3Q8ITZ9 N/A
    261838 4qnz:A (2.55) BS01 peptide N/A GO:0004252 ... N/A 25216680
    261839 4qo0:A (2.9) BS01 peptide N/A GO:0004252 ... N/A 25216680
    261840 4qo1:B (1.924) BS01 ZN ? GO:0000976 ... P04637 25324313
    261841 4qo2:A (2.1) BS01 peptide N/A GO:0004252 ... N/A 25216680
    261842 4qo4:A (1.7) BS01 35S 2.3.2.27 GO:0005634 ... Q00987 25147610 MOAD: ic50=0.005uM
    261843 4qo5:A (1.697) BS01 HEC ? N/A A8AB33 27586496
    261844 4qo5:A (1.697) BS02 HEC ? N/A A8AB33 27586496
    261845 4qo5:A (1.697) BS03 HEC ? N/A A8AB33 27586496
    261846 4qo5:A (1.697) BS04 HEC ? N/A A8AB33 27586496
    261847 4qo5:A (1.697) BS05 HEC ? N/A A8AB33 27586496
    261848 4qo5:A (1.697) BS06 HEC ? N/A A8AB33 27586496
    261849 4qo5:A (1.697) BS07 HEC ? N/A A8AB33 27586496
    261850 4qo5:A (1.697) BS08 HEC ? N/A A8AB33 27586496
    261851 4qo5:A (1.697) BS09 CA ? N/A A8AB33 27586496
    261852 4qo7:A (2.14) BS01 NAI 1.1.1.27 GO:0003824 ... P00338 25037916
    261853 4qo7:A (2.14) BS02 36V 1.1.1.27 GO:0003824 ... P00338 25037916 MOAD: Kd=3.5uM
    261854 4qo7:B (2.14) BS01 NAI 1.1.1.27 GO:0003824 ... P00338 25037916
    261855 4qo7:C (2.14) BS01 NAI 1.1.1.27 GO:0003824 ... P00338 25037916
    261856 4qo7:C (2.14) BS02 36V 1.1.1.27 GO:0003824 ... P00338 25037916 MOAD: Kd=3.5uM
    261857 4qo7:D (2.14) BS01 NAI 1.1.1.27 GO:0003824 ... P00338 25037916
    261858 4qo7:D (2.14) BS02 36V 1.1.1.27 GO:0003824 ... P00338 25037916 MOAD: Kd=3.5uM
    261859 4qo8:A (2.001) BS01 NAI 1.1.1.27 GO:0003824 ... P00338 25037916
    261860 4qo8:A (2.001) BS02 36U 1.1.1.27 GO:0003824 ... P00338 25037916 MOAD: Kd=1.8uM
    BindingDB: IC50=870nM, Kd=1800nM
    261861 4qo8:B (2.001) BS01 NAI 1.1.1.27 GO:0003824 ... P00338 25037916
    261862 4qo8:C (2.001) BS01 NAI 1.1.1.27 GO:0003824 ... P00338 25037916
    261863 4qo8:C (2.001) BS02 36U 1.1.1.27 GO:0003824 ... P00338 25037916 MOAD: Kd=1.8uM
    BindingDB: IC50=870nM, Kd=1800nM
    261864 4qo8:D (2.001) BS01 NAI 1.1.1.27 GO:0003824 ... P00338 25037916
    261865 4qo8:D (2.001) BS02 36U 1.1.1.27 GO:0003824 ... P00338 25037916 MOAD: Kd=1.8uM
    BindingDB: IC50=870nM, Kd=1800nM
    261866 4qo9:A (2.2) BS01 627 2.7.11.1 GO:0004672 ... Q9Y6E0 27135311 MOAD: ic50=0.16uM
    261867 4qo9:B (2.2) BS01 627 2.7.11.1 GO:0004672 ... Q9Y6E0 27135311 MOAD: ic50=0.16uM
    261868 4qoc:A (1.7) BS01 35T 2.3.2.27 GO:0005634 ... Q00987 25042256 MOAD: ic50=0.12nM
    BindingDB: IC50=0.100000nM
    261869 4qoc:C (1.7) BS01 35T 2.3.2.27 GO:0005634 ... Q00987 25042256 MOAD: ic50=0.12nM
    BindingDB: IC50=0.100000nM
    261870 4qoc:C (1.7) BS02 35T 2.3.2.27 GO:0005634 ... Q00987 25042256 MOAD: ic50=0.12nM
    BindingDB: IC50=0.100000nM
    261871 4qoc:E (1.7) BS01 35T 2.3.2.27 GO:0005634 ... Q00987 25042256 MOAD: ic50=0.12nM
    BindingDB: IC50=0.100000nM
    261872 4qoc:G (1.7) BS01 35T 2.3.2.27 GO:0005634 ... Q00987 25042256 MOAD: ic50=0.12nM
    BindingDB: IC50=0.100000nM
    261873 4qoc:G (1.7) BS02 35T 2.3.2.27 GO:0005634 ... Q00987 25042256 MOAD: ic50=0.12nM
    BindingDB: IC50=0.100000nM
    261874 4qoc:I (1.7) BS01 35T 2.3.2.27 GO:0005634 ... Q00987 25042256 MOAD: ic50=0.12nM
    BindingDB: IC50=0.100000nM
    261875 4qoc:K (1.7) BS01 35T 2.3.2.27 GO:0005634 ... Q00987 25042256 MOAD: ic50=0.12nM
    BindingDB: IC50=0.100000nM
    261876 4qod:A (1.35) BS01 ZN 1.10.5.1 GO:0001512 ... P16083 N/A
    261877 4qod:B (1.35) BS01 ZN 1.10.5.1 GO:0001512 ... P16083 N/A
    261878 4qoe:A (1.45) BS01 FAD 1.10.5.1 GO:0001512 ... P16083 N/A
    261879 4qoe:A (1.45) BS02 ZN 1.10.5.1 GO:0001512 ... P16083 N/A
    261880 4qoe:B (1.45) BS01 FAD 1.10.5.1 GO:0001512 ... P16083 N/A
    261881 4qoe:B (1.45) BS02 ZN 1.10.5.1 GO:0001512 ... P16083 N/A
    261882 4qof:A (1.55) BS01 FMN 1.10.5.1 GO:0001512 ... P16083 N/A
    261883 4qof:A (1.55) BS02 ZN 1.10.5.1 GO:0001512 ... P16083 N/A
    261884 4qof:B (1.55) BS01 FMN 1.10.5.1 GO:0001512 ... P16083 N/A
    261885 4qof:B (1.55) BS02 ZN 1.10.5.1 GO:0001512 ... P16083 N/A
    261886 4qog:A (1.4) BS01 FAD 1.10.5.1 GO:0001512 ... P16083 N/A
    261887 4qog:A (1.4) BS02 ML1 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=11300nM, Ki=57nM
    261888 4qog:A (1.4) BS03 ZN 1.10.5.1 GO:0001512 ... P16083 N/A
    261889 4qog:B (1.4) BS01 ML1 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=11300nM, Ki=57nM
    261890 4qog:B (1.4) BS02 FAD 1.10.5.1 GO:0001512 ... P16083 N/A
    261891 4qog:B (1.4) BS03 ML1 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=11300nM, Ki=57nM
    261892 4qog:B (1.4) BS04 ZN 1.10.5.1 GO:0001512 ... P16083 N/A
    261893 4qoh:A (1.6) BS01 FAD 1.10.5.1 GO:0001512 ... P16083 N/A
    261894 4qoh:A (1.6) BS02 STL 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=960nM, Ki=88nM, Kd=54nM
    261895 4qoh:A (1.6) BS03 ZN 1.10.5.1 GO:0001512 ... P16083 N/A
    261896 4qoh:A (1.6) BS04 STL 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=960nM, Ki=88nM, Kd=54nM
    261897 4qoh:B (1.6) BS01 STL 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=960nM, Ki=88nM, Kd=54nM
    261898 4qoh:B (1.6) BS02 FAD 1.10.5.1 GO:0001512 ... P16083 N/A
    261899 4qoh:B (1.6) BS03 STL 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=960nM, Ki=88nM, Kd=54nM
    261900 4qoh:B (1.6) BS04 ZN 1.10.5.1 GO:0001512 ... P16083 N/A
    261901 4qoi:A (1.55) BS01 FMN 1.10.5.1 GO:0001512 ... P16083 N/A
    261902 4qoi:A (1.55) BS02 ZN 1.10.5.1 GO:0001512 ... P16083 N/A
    261903 4qoi:A (1.55) BS03 ML1 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=11300nM, Ki=57nM
    261904 4qoi:B (1.55) BS01 FMN 1.10.5.1 GO:0001512 ... P16083 N/A
    261905 4qoi:B (1.55) BS02 ZN 1.10.5.1 GO:0001512 ... P16083 N/A
    261906 4qoi:B (1.55) BS03 ML1 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=11300nM, Ki=57nM
    261907 4qoj:A (1.85) BS01 FMN 1.10.5.1 GO:0001512 ... P16083 N/A
    261908 4qoj:A (1.85) BS02 STL 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=960nM, Ki=88nM, Kd=54nM
    261909 4qoj:A (1.85) BS03 ZN 1.10.5.1 GO:0001512 ... P16083 N/A
    261910 4qoj:A (1.85) BS04 STL 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=960nM, Ki=88nM, Kd=54nM
    261911 4qoj:B (1.85) BS01 STL 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=960nM, Ki=88nM, Kd=54nM
    261912 4qoj:B (1.85) BS02 FMN 1.10.5.1 GO:0001512 ... P16083 N/A
    261913 4qoj:B (1.85) BS03 STL 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=960nM, Ki=88nM, Kd=54nM
    261914 4qoj:B (1.85) BS04 ZN 1.10.5.1 GO:0001512 ... P16083 N/A
    261915 4qok:A (3.0) BS01 peptide ? N/A P04439 25471691
    261916 4qok:D (3.0) BS01 peptide N/A N/A N/A 25471691
    261917 4qok:E (3.0) BS01 peptide N/A N/A N/A 25471691
    261918 4qol:A (1.65) BS01 HEM N/A GO:0004096 ... N/A 25663126
    261919 4qol:A (1.65) BS02 HEM N/A GO:0004096 ... N/A 25663126
    261920 4qol:B (1.65) BS01 HEM N/A GO:0004096 ... N/A 25663126
    261921 4qol:B (1.65) BS02 HEM N/A GO:0004096 ... N/A 25663126
    261922 4qol:C (1.65) BS01 HEM N/A GO:0004096 ... N/A 25663126
    261923 4qol:C (1.65) BS02 HEM N/A GO:0004096 ... N/A 25663126
    261924 4qol:D (1.65) BS01 HEM N/A GO:0004096 ... N/A 25663126
    261925 4qol:D (1.65) BS02 HEM N/A GO:0004096 ... N/A 25663126
    261926 4qom:A (1.65) BS01 HEM N/A GO:0004096 ... N/A 25663126
    261927 4qom:A (1.65) BS02 HEM N/A GO:0004096 ... N/A 25663126
    261928 4qom:A (1.65) BS03 PYG N/A GO:0004096 ... N/A 25663126
    261929 4qom:A (1.65) BS04 PYG N/A GO:0004096 ... N/A 25663126
    261930 4qom:B (1.65) BS01 HEM N/A GO:0004096 ... N/A 25663126
    261931 4qom:B (1.65) BS02 HEM N/A GO:0004096 ... N/A 25663126
    261932 4qom:B (1.65) BS03 PYG N/A GO:0004096 ... N/A 25663126
    261933 4qom:B (1.65) BS04 PYG N/A GO:0004096 ... N/A 25663126
    261934 4qom:C (1.65) BS01 HEM N/A GO:0004096 ... N/A 25663126
    261935 4qom:C (1.65) BS02 HEM N/A GO:0004096 ... N/A 25663126
    261936 4qom:C (1.65) BS03 PYG N/A GO:0004096 ... N/A 25663126
    261937 4qom:C (1.65) BS04 PYG N/A GO:0004096 ... N/A 25663126
    261938 4qom:D (1.65) BS01 HEM N/A GO:0004096 ... N/A 25663126
    261939 4qom:D (1.65) BS02 HEM N/A GO:0004096 ... N/A 25663126
    261940 4qom:D (1.65) BS03 PYG N/A GO:0004096 ... N/A 25663126
    261941 4qom:D (1.65) BS04 PYG N/A GO:0004096 ... N/A 25663126
    261942 4qon:A (1.8) BS01 HEM N/A GO:0004096 ... N/A 25663126
    261943 4qon:A (1.8) BS02 HEM N/A GO:0004096 ... N/A 25663126
    261944 4qon:A (1.8) BS03 CAQ N/A GO:0004096 ... N/A 25663126
    261945 4qon:A (1.8) BS04 CAQ N/A GO:0004096 ... N/A 25663126
    261946 4qon:B (1.8) BS01 HEM N/A GO:0004096 ... N/A 25663126
    261947 4qon:B (1.8) BS02 HEM N/A GO:0004096 ... N/A 25663126
    261948 4qon:B (1.8) BS03 CAQ N/A GO:0004096 ... N/A 25663126
    261949 4qon:B (1.8) BS04 CAQ N/A GO:0004096 ... N/A 25663126
    261950 4qon:B (1.8) BS05 CAQ N/A GO:0004096 ... N/A 25663126
    261951 4qon:C (1.8) BS01 HEM N/A GO:0004096 ... N/A 25663126
    261952 4qon:C (1.8) BS02 HEM N/A GO:0004096 ... N/A 25663126
    261953 4qon:C (1.8) BS03 CAQ N/A GO:0004096 ... N/A 25663126
    261954 4qon:C (1.8) BS04 CAQ N/A GO:0004096 ... N/A 25663126
    261955 4qon:C (1.8) BS05 CAQ N/A GO:0004096 ... N/A 25663126
    261956 4qon:D (1.8) BS01 HEM N/A GO:0004096 ... N/A 25663126
    261957 4qon:D (1.8) BS02 HEM N/A GO:0004096 ... N/A 25663126
    261958 4qon:D (1.8) BS03 CAQ N/A GO:0004096 ... N/A 25663126
    261959 4qon:D (1.8) BS04 CAQ N/A GO:0004096 ... N/A 25663126
    261960 4qon:D (1.8) BS05 CAQ N/A GO:0004096 ... N/A 25663126
    261961 4qoo:A (1.75) BS01 HEM N/A GO:0004096 ... N/A 25663126
    261962 4qoo:A (1.75) BS02 HEM N/A GO:0004096 ... N/A 25663126
    261963 4qoo:A (1.75) BS03 RCO N/A GO:0004096 ... N/A 25663126
    261964 4qoo:B (1.75) BS01 HEM N/A GO:0004096 ... N/A 25663126
    261965 4qoo:B (1.75) BS02 HEM N/A GO:0004096 ... N/A 25663126
    261966 4qoo:B (1.75) BS03 RCO N/A GO:0004096 ... N/A 25663126
    261967 4qoo:C (1.75) BS01 HEM N/A GO:0004096 ... N/A 25663126
    261968 4qoo:C (1.75) BS02 HEM N/A GO:0004096 ... N/A 25663126
    261969 4qoo:C (1.75) BS03 RCO N/A GO:0004096 ... N/A 25663126
    261970 4qoo:D (1.75) BS01 HEM N/A GO:0004096 ... N/A 25663126
    261971 4qoo:D (1.75) BS02 HEM N/A GO:0004096 ... N/A 25663126
    261972 4qoo:D (1.75) BS03 RCO N/A GO:0004096 ... N/A 25663126
    261973 4qop:A (1.9) BS01 HEM N/A GO:0004096 ... N/A 25663126
    261974 4qop:A (1.9) BS02 HEM N/A GO:0004096 ... N/A 25663126
    261975 4qop:A (1.9) BS03 HQE N/A GO:0004096 ... N/A 25663126
    261976 4qop:B (1.9) BS01 HEM N/A GO:0004096 ... N/A 25663126
    261977 4qop:B (1.9) BS02 HEM N/A GO:0004096 ... N/A 25663126
    261978 4qop:B (1.9) BS03 HQE N/A GO:0004096 ... N/A 25663126
    261979 4qop:C (1.9) BS01 HEM N/A GO:0004096 ... N/A 25663126
    261980 4qop:C (1.9) BS02 HEM N/A GO:0004096 ... N/A 25663126
    261981 4qop:C (1.9) BS03 HQE N/A GO:0004096 ... N/A 25663126
    261982 4qop:D (1.9) BS01 HEM N/A GO:0004096 ... N/A 25663126
    261983 4qop:D (1.9) BS02 HEM N/A GO:0004096 ... N/A 25663126
    261984 4qop:D (1.9) BS03 HQE N/A GO:0004096 ... N/A 25663126
    261985 4qoq:A (1.7) BS01 HEM N/A GO:0004096 ... N/A 25663126
    261986 4qoq:A (1.7) BS02 HEM N/A GO:0004096 ... N/A 25663126
    261987 4qoq:A (1.7) BS03 JZ3 N/A GO:0004096 ... N/A 25663126
    261988 4qoq:B (1.7) BS01 HEM N/A GO:0004096 ... N/A 25663126
    261989 4qoq:B (1.7) BS02 HEM N/A GO:0004096 ... N/A 25663126
    261990 4qoq:B (1.7) BS03 JZ3 N/A GO:0004096 ... N/A 25663126
    261991 4qoq:B (1.7) BS04 JZ3 N/A GO:0004096 ... N/A 25663126
    261992 4qoq:C (1.7) BS01 HEM N/A GO:0004096 ... N/A 25663126
    261993 4qoq:C (1.7) BS02 HEM N/A GO:0004096 ... N/A 25663126
    261994 4qoq:C (1.7) BS03 JZ3 N/A GO:0004096 ... N/A 25663126
    261995 4qoq:D (1.7) BS01 HEM N/A GO:0004096 ... N/A 25663126
    261996 4qoq:D (1.7) BS02 HEM N/A GO:0004096 ... N/A 25663126
    261997 4qoq:D (1.7) BS03 JZ3 N/A GO:0004096 ... N/A 25663126
    261998 4qoq:D (1.7) BS04 JZ3 N/A GO:0004096 ... N/A 25663126
    261999 4qor:A (1.95) BS01 HEM N/A GO:0004096 ... N/A 25663126
    262000 4qor:A (1.95) BS02 HEM N/A GO:0004096 ... N/A 25663126

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).