SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    262201 4qqx:C (3.34) BS04 ATP ? GO:0003723 ... Q47PJ0 25132177
    262202 4qqx:E (3.34) BS01 dna ? GO:0003723 ... Q47PJ0 25132177
    262203 4qqx:E (3.34) BS02 FE ? GO:0003723 ... Q47PJ0 25132177
    262204 4qqx:E (3.34) BS03 FE ? GO:0003723 ... Q47PJ0 25132177
    262205 4qqx:E (3.34) BS04 ATP ? GO:0003723 ... Q47PJ0 25132177
    262206 4qqx:G (3.34) BS01 dna ? GO:0003723 ... Q47PJ0 25132177
    262207 4qqx:G (3.34) BS02 FE ? GO:0003723 ... Q47PJ0 25132177
    262208 4qqx:G (3.34) BS03 FE ? GO:0003723 ... Q47PJ0 25132177
    262209 4qqx:G (3.34) BS04 ATP ? GO:0003723 ... Q47PJ0 25132177
    262210 4qqy:A (3.12) BS01 dna ? GO:0003723 ... Q47PJ0 25132177
    262211 4qqy:A (3.12) BS02 FE ? GO:0003723 ... Q47PJ0 25132177
    262212 4qqy:A (3.12) BS03 FE ? GO:0003723 ... Q47PJ0 25132177
    262213 4qqy:A (3.12) BS04 ADP ? GO:0003723 ... Q47PJ0 25132177
    262214 4qqy:C (3.12) BS01 dna ? GO:0003723 ... Q47PJ0 25132177
    262215 4qqy:C (3.12) BS02 FE ? GO:0003723 ... Q47PJ0 25132177
    262216 4qqy:C (3.12) BS03 FE ? GO:0003723 ... Q47PJ0 25132177
    262217 4qqy:C (3.12) BS04 ADP ? GO:0003723 ... Q47PJ0 25132177
    262218 4qqy:E (3.12) BS01 dna ? GO:0003723 ... Q47PJ0 25132177
    262219 4qqy:E (3.12) BS02 FE ? GO:0003723 ... Q47PJ0 25132177
    262220 4qqy:E (3.12) BS03 FE ? GO:0003723 ... Q47PJ0 25132177
    262221 4qqy:E (3.12) BS04 ADP ? GO:0003723 ... Q47PJ0 25132177
    262222 4qqy:G (3.12) BS01 dna ? GO:0003723 ... Q47PJ0 25132177
    262223 4qqy:G (3.12) BS02 FE ? GO:0003723 ... Q47PJ0 25132177
    262224 4qqy:G (3.12) BS03 FE ? GO:0003723 ... Q47PJ0 25132177
    262225 4qqy:G (3.12) BS04 ADP ? GO:0003723 ... Q47PJ0 25132177
    262226 4qqz:A (2.93) BS01 dna ? GO:0003723 ... Q47PJ0 25132177
    262227 4qqz:A (2.93) BS02 FE ? GO:0003723 ... Q47PJ0 25132177
    262228 4qqz:A (2.93) BS03 FE ? GO:0003723 ... Q47PJ0 25132177
    262229 4qqz:A (2.93) BS04 ANP ? GO:0003723 ... Q47PJ0 25132177
    262230 4qqz:C (2.93) BS01 dna ? GO:0003723 ... Q47PJ0 25132177
    262231 4qqz:C (2.93) BS02 FE ? GO:0003723 ... Q47PJ0 25132177
    262232 4qqz:C (2.93) BS03 FE ? GO:0003723 ... Q47PJ0 25132177
    262233 4qqz:C (2.93) BS04 ANP ? GO:0003723 ... Q47PJ0 25132177
    262234 4qqz:E (2.93) BS01 dna ? GO:0003723 ... Q47PJ0 25132177
    262235 4qqz:E (2.93) BS02 FE ? GO:0003723 ... Q47PJ0 25132177
    262236 4qqz:E (2.93) BS03 FE ? GO:0003723 ... Q47PJ0 25132177
    262237 4qqz:E (2.93) BS04 ANP ? GO:0003723 ... Q47PJ0 25132177
    262238 4qqz:G (2.93) BS01 dna ? GO:0003723 ... Q47PJ0 25132177
    262239 4qqz:G (2.93) BS02 FE ? GO:0003723 ... Q47PJ0 25132177
    262240 4qqz:G (2.93) BS03 FE ? GO:0003723 ... Q47PJ0 25132177
    262241 4qqz:G (2.93) BS04 ANP ? GO:0003723 ... Q47PJ0 25132177
    262242 4qr3:A (1.374) BS01 BNJ ? N/A O60885 25559428 MOAD: ic50=1.4uM
    BindingDB: IC50=1400nM
    262243 4qr4:A (1.28) BS01 BNK ? N/A O60885 25559428 MOAD: ic50=0.25uM
    BindingDB: IC50=250nM
    262244 4qr5:A (1.41) BS01 BNM ? N/A O60885 25559428 MOAD: ic50=0.06uM
    BindingDB: IC50=60nM
    262245 4qr6:A (1.05) BS01 NAP 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 N/A
    262246 4qr6:A (1.05) BS02 37V 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 N/A
    262247 4qr7:A (2.303) BS01 MLD 2.3.2.- GO:0005886 ... I6Y9J2 N/A
    262248 4qr7:A (2.303) BS02 DWZ 2.3.2.- GO:0005886 ... I6Y9J2 N/A
    262249 4qr8:A (1.999) BS01 MG 3.4.13.9 GO:0004177 ... P21165 25354344
    262250 4qr8:A (1.999) BS02 MG 3.4.13.9 GO:0004177 ... P21165 25354344
    262251 4qr8:B (1.999) BS01 MG 3.4.13.9 GO:0004177 ... P21165 25354344
    262252 4qr8:B (1.999) BS02 MG 3.4.13.9 GO:0004177 ... P21165 25354344
    262253 4qr9:A (2.0) BS01 dna ? GO:0003677 ... P63159 26143914
    262254 4qr9:A (2.0) BS02 dna ? GO:0003677 ... P63159 26143914
    262255 4qr9:A (2.0) BS03 dna ? GO:0003677 ... P63159 26143914
    262256 4qr9:B (2.0) BS01 dna ? GO:0003677 ... P63159 26143914
    262257 4qr9:B (2.0) BS02 dna ? GO:0003677 ... P63159 26143914
    262258 4qrb:A (1.64) BS01 MLD 2.3.2.- GO:0005886 ... I6Y9J2 N/A
    262259 4qrc:A (1.901) BS01 0LI 2.7.10.1 GO:0004672 ... P22455 25317566 BindingDB: IC50=8.0nM
    262260 4qrd:A (1.97) BS01 3BJ N/A GO:0000166 ... N/A N/A
    262261 4qre:A (1.7) BS01 3BG N/A GO:0000166 ... N/A N/A
    262262 4qre:A (1.7) BS02 ATP N/A GO:0000166 ... N/A N/A
    262263 4qrf:A (1.8) BS01 QAP ? N/A P02766 25314129 BindingDB: EC50=8600nM
    262264 4qrf:B (1.8) BS01 QAP ? N/A P02766 25314129 BindingDB: EC50=8600nM
    262265 4qrh:B (1.65) BS01 0O2 2.7.4.8 GO:0004385 ... A0A0J9X1Z9 25661490 MOAD: Ki=7uM
    262266 4qrh:C (1.65) BS01 0O2 2.7.4.8 GO:0004385 ... A0A0J9X1Z9 25661490 MOAD: Ki=7uM
    262267 4qrh:D (1.65) BS01 0O2 2.7.4.8 GO:0004385 ... A0A0J9X1Z9 25661490 MOAD: Ki=7uM
    262268 4qrn:A (1.07) BS01 MN ? GO:0005737 ... Q2GA79 N/A
    262269 4qrn:A (1.07) BS02 1DF ? GO:0005737 ... Q2GA79 N/A
    262270 4qrn:B (1.07) BS01 MN ? GO:0005737 ... Q2GA79 N/A
    262271 4qrn:B (1.07) BS02 1DF ? GO:0005737 ... Q2GA79 N/A
    262272 4qrn:C (1.07) BS01 MN ? GO:0005737 ... Q2GA79 N/A
    262273 4qrn:C (1.07) BS02 1DF ? GO:0005737 ... Q2GA79 N/A
    262274 4qrn:D (1.07) BS01 MN ? GO:0005737 ... Q2GA79 N/A
    262275 4qrn:D (1.07) BS02 1DF ? GO:0005737 ... Q2GA79 N/A
    262276 4qro:A (1.65) BS01 MN 4.1.1.103 GO:0005737 ... Q12BV1 N/A
    262277 4qro:A (1.65) BS02 38L 4.1.1.103 GO:0005737 ... Q12BV1 N/A
    262278 4qro:B (1.65) BS01 MN 4.1.1.103 GO:0005737 ... Q12BV1 N/A
    262279 4qro:B (1.65) BS02 38L 4.1.1.103 GO:0005737 ... Q12BV1 N/A
    262280 4qro:C (1.65) BS01 MN 4.1.1.103 GO:0005737 ... Q12BV1 N/A
    262281 4qro:C (1.65) BS02 38L 4.1.1.103 GO:0005737 ... Q12BV1 N/A
    262282 4qro:D (1.65) BS01 MN 4.1.1.103 GO:0005737 ... Q12BV1 N/A
    262283 4qro:D (1.65) BS02 38L 4.1.1.103 GO:0005737 ... Q12BV1 N/A
    262284 4qro:E (1.65) BS01 MN 4.1.1.103 GO:0005737 ... Q12BV1 N/A
    262285 4qro:E (1.65) BS02 38L 4.1.1.103 GO:0005737 ... Q12BV1 N/A
    262286 4qro:F (1.65) BS01 MN 4.1.1.103 GO:0005737 ... Q12BV1 N/A
    262287 4qro:F (1.65) BS02 38L 4.1.1.103 GO:0005737 ... Q12BV1 N/A
    262288 4qro:G (1.65) BS01 MN 4.1.1.103 GO:0005737 ... Q12BV1 N/A
    262289 4qro:G (1.65) BS02 38L 4.1.1.103 GO:0005737 ... Q12BV1 N/A
    262290 4qro:H (1.65) BS01 MN 4.1.1.103 GO:0005737 ... Q12BV1 N/A
    262291 4qro:H (1.65) BS02 38L 4.1.1.103 GO:0005737 ... Q12BV1 N/A
    262292 4qrp:A (2.9) BS01 peptide ? N/A P01889 25355921
    262293 4qrp:D (2.9) BS01 peptide N/A N/A N/A 25355921
    262294 4qrp:E (2.9) BS01 peptide N/A N/A N/A 25355921
    262295 4qrp:F (2.9) BS01 peptide ? N/A P01889 25355921
    262296 4qrp:I (2.9) BS01 peptide N/A N/A N/A 25355921
    262297 4qrq:A (1.7) BS01 peptide ? N/A P01889 25355921
    262298 4qrr:A (3.0) BS01 peptide ? N/A P01889 25452463
    262299 4qrr:D (3.0) BS01 peptide N/A N/A N/A 25452463
    262300 4qrr:E (3.0) BS01 peptide N/A N/A N/A 25452463
    262301 4qrs:A (1.4) BS01 peptide ? N/A P01889 24509977
    262302 4qrt:A (1.4) BS01 peptide ? N/A P01889 24509977
    262303 4qru:A (1.6) BS01 peptide ? N/A P01889 24509977
    262304 4qry:A (2.2) BS01 RET N/A GO:0005216 ... N/A 26039169
    262305 4qry:A (2.2) BS02 BR N/A GO:0005216 ... N/A 26039169
    262306 4qry:A (2.2) BS03 BR N/A GO:0005216 ... N/A 26039169
    262307 4qry:A (2.2) BS04 RET N/A GO:0005216 ... N/A 26039169
    262308 4qry:A (2.2) BS05 BR N/A GO:0005216 ... N/A 26039169
    262309 4qry:A (2.2) BS06 BR N/A GO:0005216 ... N/A 26039169
    262310 4qry:B (2.2) BS01 BR N/A GO:0005216 ... N/A 26039169
    262311 4qry:B (2.2) BS02 RET N/A GO:0005216 ... N/A 26039169
    262312 4qry:B (2.2) BS03 BR N/A GO:0005216 ... N/A 26039169
    262313 4qry:B (2.2) BS04 RET N/A GO:0005216 ... N/A 26039169
    262314 4qry:B (2.2) BS05 BR N/A GO:0005216 ... N/A 26039169
    262315 4qry:C (2.2) BS01 BR N/A GO:0005216 ... N/A 26039169
    262316 4qry:C (2.2) BS02 RET N/A GO:0005216 ... N/A 26039169
    262317 4qry:C (2.2) BS03 BR N/A GO:0005216 ... N/A 26039169
    262318 4qry:C (2.2) BS04 RET N/A GO:0005216 ... N/A 26039169
    262319 4qry:C (2.2) BS05 BR N/A GO:0005216 ... N/A 26039169
    262320 4qry:E (2.2) BS01 RET N/A GO:0005216 ... N/A 26039169
    262321 4qry:E (2.2) BS02 BR N/A GO:0005216 ... N/A 26039169
    262322 4qry:E (2.2) BS03 BR N/A GO:0005216 ... N/A 26039169
    262323 4qry:E (2.2) BS04 RET N/A GO:0005216 ... N/A 26039169
    262324 4qry:E (2.2) BS05 BR N/A GO:0005216 ... N/A 26039169
    262325 4qry:E (2.2) BS06 BR N/A GO:0005216 ... N/A 26039169
    262326 4qry:F (2.2) BS01 BR N/A GO:0005216 ... N/A 26039169
    262327 4qry:F (2.2) BS02 RET N/A GO:0005216 ... N/A 26039169
    262328 4qry:F (2.2) BS03 BR N/A GO:0005216 ... N/A 26039169
    262329 4qry:F (2.2) BS04 BR N/A GO:0005216 ... N/A 26039169
    262330 4qry:F (2.2) BS05 RET N/A GO:0005216 ... N/A 26039169
    262331 4qry:F (2.2) BS06 BR N/A GO:0005216 ... N/A 26039169
    262332 4qry:G (2.2) BS01 BR N/A GO:0005216 ... N/A 26039169
    262333 4qry:G (2.2) BS02 RET N/A GO:0005216 ... N/A 26039169
    262334 4qry:G (2.2) BS03 BR N/A GO:0005216 ... N/A 26039169
    262335 4qry:G (2.2) BS04 BR N/A GO:0005216 ... N/A 26039169
    262336 4qry:G (2.2) BS05 RET N/A GO:0005216 ... N/A 26039169
    262337 4qry:G (2.2) BS06 BR N/A GO:0005216 ... N/A 26039169
    262338 4qrz:A (1.34) BS01 BGC ? GO:0015768 ... A9CGI0 N/A
    262339 4qrz:A (1.34) BS02 GLC ? GO:0015768 ... A9CGI0 N/A
    262340 4qrz:A (1.34) BS03 GLC ? GO:0015768 ... A9CGI0 N/A
    262341 4qs5:A (1.8) BS01 MN ? GO:0005737 ... Q2GA79 N/A
    262342 4qs5:A (1.8) BS02 1DF ? GO:0005737 ... Q2GA79 N/A
    262343 4qs5:B (1.8) BS01 MN ? GO:0005737 ... Q2GA79 N/A
    262344 4qs5:B (1.8) BS02 1DF ? GO:0005737 ... Q2GA79 N/A
    262345 4qs5:C (1.8) BS01 MN ? GO:0005737 ... Q2GA79 N/A
    262346 4qs5:C (1.8) BS02 1DF ? GO:0005737 ... Q2GA79 N/A
    262347 4qs5:D (1.8) BS01 MN ? GO:0005737 ... Q2GA79 N/A
    262348 4qs5:D (1.8) BS02 1DF ? GO:0005737 ... Q2GA79 N/A
    262349 4qs6:A (1.76) BS01 1DF ? GO:0005737 ... Q2GA79 N/A
    262350 4qs6:B (1.76) BS01 1DF ? GO:0005737 ... Q2GA79 N/A
    262351 4qs7:A (2.001) BS01 BGC 2.7.1.1 GO:0000325 ... Q42525 25664748 MOAD: Kd=89uM
    262352 4qs9:A (2.103) BS01 BGC 2.7.1.1 GO:0000325 ... Q42525 25664748 MOAD: Kd=15uM
    262353 4qsa:A (1.501) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 25493428
    262354 4qsa:A (1.501) BS02 EWW 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 25493428 MOAD: Kd=40nM
    BindingDB: Kd=21nM
    262355 4qsb:A (1.4) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 25493428
    262356 4qsb:A (1.4) BS02 EWY 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 25493428 MOAD: Kd=1300nM
    BindingDB: Kd=1250nM
    262357 4qsc:A (1.3) BS01 BGC ? GO:0015768 ... A9CGI0 N/A
    262358 4qsc:A (1.3) BS02 GLC ? GO:0015768 ... A9CGI0 N/A
    262359 4qsc:A (1.3) BS03 GLC ? GO:0015768 ... A9CGI0 N/A
    262360 4qsc:A (1.3) BS04 GLC ? GO:0015768 ... A9CGI0 N/A
    262361 4qsd:A (1.34) BS01 GLC ? GO:0015768 ... A9CGI0 N/A
    262362 4qsd:A (1.34) BS02 FRU ? GO:0015768 ... A9CGI0 N/A
    262363 4qsd:A (1.34) BS03 GLC ? GO:0015768 ... A9CGI0 N/A
    262364 4qsd:A (1.34) BS04 FRU ? GO:0015768 ... A9CGI0 N/A
    262365 4qsd:A (1.34) BS05 GLC ? GO:0015768 ... A9CGI0 N/A
    262366 4qsd:A (1.34) BS06 FRU ? GO:0015768 ... A9CGI0 N/A
    262367 4qsf:A (1.65) BS01 MN ? GO:0008270 ... B4EXV8 N/A
    262368 4qsf:A (1.65) BS02 MN ? GO:0008270 ... B4EXV8 N/A
    262369 4qsf:A (1.65) BS03 BUA ? GO:0008270 ... B4EXV8 N/A
    262370 4qsh:A (2.51) BS01 MN N/A GO:0003824 ... N/A 25215494
    262371 4qsh:A (2.51) BS02 2BA N/A GO:0003824 ... N/A 25215494
    262372 4qsh:B (2.51) BS01 MN N/A GO:0003824 ... N/A 25215494
    262373 4qsh:B (2.51) BS02 2BA N/A GO:0003824 ... N/A 25215494
    262374 4qsh:C (2.51) BS01 2BA N/A GO:0003824 ... N/A 25215494
    262375 4qsh:C (2.51) BS02 MN N/A GO:0003824 ... N/A 25215494
    262376 4qsh:D (2.51) BS01 2BA N/A GO:0003824 ... N/A 25215494
    262377 4qsh:D (2.51) BS02 MN N/A GO:0003824 ... N/A 25215494
    262378 4qsi:A (1.95) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 25493428
    262379 4qsi:A (1.95) BS02 EWZ 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 25493428 MOAD: Kd=50nM
    BindingDB: Kd=50nM
    262380 4qsj:A (1.7) BS01 ZN 4.2.1.1 GO:0004089 ... Q8N1Q1 25493428
    262381 4qsj:A (1.7) BS02 EWW 4.2.1.1 GO:0004089 ... Q8N1Q1 25493428 MOAD: Kd=5nM
    BindingDB: Kd=33nM
    262382 4qsj:B (1.7) BS01 ZN 4.2.1.1 GO:0004089 ... Q8N1Q1 25493428
    262383 4qsj:B (1.7) BS02 EWW 4.2.1.1 GO:0004089 ... Q8N1Q1 25493428 MOAD: Kd=5nM
    BindingDB: Kd=33nM
    262384 4qsk:A (2.7) BS01 2BA N/A GO:0003824 ... N/A 25215494
    262385 4qsk:A (2.7) BS02 MN N/A GO:0003824 ... N/A 25215494
    262386 4qsk:B (2.7) BS01 MN N/A GO:0003824 ... N/A 25215494
    262387 4qsk:B (2.7) BS02 2BA N/A GO:0003824 ... N/A 25215494
    262388 4qsm:A (3.0) BS01 38K 1.1.1.27 GO:0003824 ... P00338 25664730 BindingDB: IC50=4800nM
    262389 4qsm:B (3.0) BS01 38K 1.1.1.27 GO:0003824 ... P00338 25664730 BindingDB: IC50=4800nM
    262390 4qsm:C (3.0) BS01 38K 1.1.1.27 GO:0003824 ... P00338 25664730 BindingDB: IC50=4800nM
    262391 4qsm:D (3.0) BS01 38K 1.1.1.27 GO:0003824 ... P00338 25664730 BindingDB: IC50=4800nM
    262392 4qsm:E (3.0) BS01 38K 1.1.1.27 GO:0003824 ... P00338 25664730 BindingDB: IC50=4800nM
    262393 4qsm:F (3.0) BS01 38K 1.1.1.27 GO:0003824 ... P00338 25664730 BindingDB: IC50=4800nM
    262394 4qsm:G (3.0) BS01 38K 1.1.1.27 GO:0003824 ... P00338 25664730 BindingDB: IC50=4800nM
    262395 4qsm:H (3.0) BS01 38K 1.1.1.27 GO:0003824 ... P00338 25664730 BindingDB: IC50=4800nM
    262396 4qsp:A (1.6) BS01 ALY 3.6.1.- N/A Q6PL18 N/A
    262397 4qss:A (2.0) BS01 MB3 3.6.1.- N/A Q6PL18 N/A
    262398 4qst:A (2.05) BS01 12Q 3.6.1.- N/A Q6PL18 N/A BindingDB: IC50=>100000nM
    262399 4qsu:A (1.9) BS01 TDR 3.6.1.- N/A Q6PL18 N/A
    262400 4qsw:A (1.8) BS01 38T 3.6.1.- N/A Q6PL18 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).