SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    267201 4ryq:A (1.7) BS02 MPG ? GO:0005886 ... Q81BL7 25635100
    267202 4ryq:A (1.7) BS03 MPG ? GO:0005886 ... Q81BL7 25635100
    267203 4ryq:A (1.7) BS04 MPG ? GO:0005886 ... Q81BL7 25635100
    267204 4ryq:A (1.7) BS05 MPG ? GO:0005886 ... Q81BL7 25635100
    267205 4ryr:A (1.704) BS01 MPG ? GO:0005886 ... Q81BL7 25635100
    267206 4ryr:A (1.704) BS02 MPG ? GO:0005886 ... Q81BL7 25635100
    267207 4ryr:A (1.704) BS03 MPG ? GO:0005886 ... Q81BL7 25635100
    267208 4ryr:A (1.704) BS04 MPG ? GO:0005886 ... Q81BL7 25635100
    267209 4ryt:A (2.09) BS01 MG 3.1.3.5
    3.1.3.6
    3.6.1.11
    GO:0004309 ... P66881 26327371
    267210 4ryu:A (2.04) BS01 MG 3.1.3.5
    3.1.3.6
    3.6.1.11
    GO:0004309 ... P66881 26327371
    267211 4ryu:B (2.04) BS01 MG 3.1.3.5
    3.1.3.6
    3.6.1.11
    GO:0004309 ... P66881 26327371
    267212 4ryu:C (2.04) BS01 MG 3.1.3.5
    3.1.3.6
    3.6.1.11
    GO:0004309 ... P66881 26327371
    267213 4ryu:D (2.04) BS01 MG 3.1.3.5
    3.1.3.6
    3.6.1.11
    GO:0004309 ... P66881 26327371
    267214 4ryv:A (1.38) BS01 ZEA 3.1.27.- GO:0004540 ... P52778 26644353
    267215 4ryv:A (1.38) BS02 ZEA 3.1.27.- GO:0004540 ... P52778 26644353
    267216 4ryv:A (1.38) BS03 ZEA 3.1.27.- GO:0004540 ... P52778 26644353
    267217 4ryv:A (1.38) BS04 ZEA 3.1.27.- GO:0004540 ... P52778 26644353
    267218 4ryv:A (1.38) BS05 ZEA 3.1.27.- GO:0004540 ... P52778 26644353
    267219 4ryx:A (2.0) BS01 FE2 3.1.1.64
    5.3.3.22
    GO:0001523 ... Q28175 26075817
    267220 4ryx:A (2.0) BS02 A3V 3.1.1.64
    5.3.3.22
    GO:0001523 ... Q28175 26075817 BindingDB: IC50=<1000nM
    267221 4ryy:A (2.3) BS01 FE2 3.1.1.64
    5.3.3.22
    GO:0001523 ... Q28175 26075817
    267222 4ryy:A (2.3) BS02 A3V 3.1.1.64
    5.3.3.22
    GO:0001523 ... Q28175 26075817 BindingDB: IC50=<1000nM
    267223 4ryy:B (2.3) BS01 FE2 3.1.1.64
    5.3.3.22
    GO:0001523 ... Q28175 26075817
    267224 4ryy:B (2.3) BS02 A3V 3.1.1.64
    5.3.3.22
    GO:0001523 ... Q28175 26075817 BindingDB: IC50=<1000nM
    267225 4ryz:A (2.5) BS01 FE2 3.1.1.64
    5.3.3.22
    GO:0001523 ... Q28175 26075817
    267226 4ryz:A (2.5) BS02 A5V 3.1.1.64
    5.3.3.22
    GO:0001523 ... Q28175 26075817 BindingDB: IC50=<1000nM
    267227 4ryz:B (2.5) BS01 FE2 3.1.1.64
    5.3.3.22
    GO:0001523 ... Q28175 26075817
    267228 4ryz:B (2.5) BS02 A5V 3.1.1.64
    5.3.3.22
    GO:0001523 ... Q28175 26075817 BindingDB: IC50=<1000nM
    267229 4rz1:A (2.6) BS01 3ZN 3.4.23.15 GO:0004190 ... P00797 25754490 BindingDB: IC50=80nM
    267230 4rz1:B (2.6) BS01 3ZN 3.4.23.15 GO:0004190 ... P00797 25754490 BindingDB: IC50=80nM
    267231 4rz3:A (1.9) BS01 ADP ? GO:0005524 ... A4IMB4 25733861
    267232 4rz3:A (1.9) BS02 ADP ? GO:0005524 ... A4IMB4 25733861
    267233 4rz3:B (1.9) BS01 ADP ? GO:0005524 ... A4IMB4 25733861
    267234 4rz3:B (1.9) BS02 ADP ? GO:0005524 ... A4IMB4 25733861
    267235 4rz7:A (2.351) BS01 1E8 2.7.11.12 GO:0004672 ... A5K0N4 N/A
    267236 4rz8:A (1.9) BS01 3ZM ? GO:0019031 ... A0A0M3KKW9 26301736 MOAD: ic50~270nM
    267237 4rz8:B (1.9) BS01 3ZM ? GO:0019031 ... A0A0M3KKW9 26301736 MOAD: ic50~270nM
    267238 4rz8:C (1.9) BS01 3ZM ? GO:0019031 ... A0A0M3KKW9 26301736 MOAD: ic50~270nM
    267239 4rz8:D (1.9) BS01 3ZM ? GO:0019031 ... A0A0M3KKW9 26301736 MOAD: ic50~270nM
    267240 4rzb:A (1.863) BS01 NFQ 3.5.3.13 GO:0005829 ... Q9HU77 25559274 MOAD: Ki=30uM
    267241 4rzb:A (1.863) BS02 ZN 3.5.3.13 GO:0005829 ... Q9HU77 25559274
    267242 4rzb:B (1.863) BS01 NFQ 3.5.3.13 GO:0005829 ... Q9HU77 25559274 MOAD: Ki=30uM
    267243 4rzb:B (1.863) BS02 ZN 3.5.3.13 GO:0005829 ... Q9HU77 25559274
    267244 4rzc:A (2.723) BS01 M6P N/A N/A N/A 26503547
    267245 4rzc:B (2.723) BS01 M6P N/A N/A N/A 26503547
    267246 4rzc:C (2.723) BS01 M6P N/A N/A N/A 26503547
    267247 4rzc:E (2.723) BS01 M6P N/A N/A N/A 26503547
    267248 4rzc:H (2.723) BS01 M6P N/A N/A N/A 26503547
    267249 4rzg:A (2.7) BS01 ZHN ? GO:0003677 ... P22736 25822914
    267250 4rzm:A (2.33) BS01 LSD 5.5.1.- N/A B6ZK72 25535803
    267251 4rzm:B (2.33) BS01 LSD 5.5.1.- N/A B6ZK72 25535803
    267252 4rzq:A (1.98) BS01 Y7Y 6.3.4.14 GO:0003824 ... P43873 26020841
    267253 4rzq:A (1.98) BS02 ADP 6.3.4.14 GO:0003824 ... P43873 26020841
    267254 4rzr:A (2.2) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 26327169
    267255 4rzr:A (2.2) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 26327169
    267256 4rzr:A (2.2) BS03 CA 2.7.7.7 GO:0000287 ... Q97W02 26327169
    267257 4rzr:A (2.2) BS04 CA 2.7.7.7 GO:0000287 ... Q97W02 26327169
    267258 4rzr:D (2.2) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 26327169
    267259 4rzr:D (2.2) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 26327169
    267260 4rzr:D (2.2) BS03 DCP 2.7.7.7 GO:0000287 ... Q97W02 26327169
    267261 4rzr:D (2.2) BS04 CA 2.7.7.7 GO:0000287 ... Q97W02 26327169
    267262 4rzr:D (2.2) BS05 CA 2.7.7.7 GO:0000287 ... Q97W02 26327169
    267263 4rzt:A (3.1) BS01 RRY ? GO:0000976 ... P03023 26689263
    267264 4rzt:A (3.1) BS02 RRJ ? GO:0000976 ... P03023 26689263
    267265 4rzt:B (3.1) BS01 RRY ? GO:0000976 ... P03023 26689263
    267266 4rzt:B (3.1) BS02 RRJ ? GO:0000976 ... P03023 26689263
    267267 4rzt:C (3.1) BS01 RRY ? GO:0000976 ... P03023 26689263
    267268 4rzt:C (3.1) BS02 RRJ ? GO:0000976 ... P03023 26689263
    267269 4rzt:D (3.1) BS01 RRY ? GO:0000976 ... P03023 26689263
    267270 4rzt:D (3.1) BS02 RRJ ? GO:0000976 ... P03023 26689263
    267271 4rzv:A (2.994) BS01 032 2.7.11.1 GO:0004672 ... P15056 N/A BindingDB: IC50=31nM, Kd=51nM, EC50=2290nM
    267272 4rzv:B (2.994) BS01 032 2.7.11.1 GO:0004672 ... P15056 N/A BindingDB: IC50=31nM, Kd=51nM, EC50=2290nM
    267273 4rzw:A (3.493) BS01 B1E 2.7.11.1 GO:0004672 ... P15056 N/A BindingDB: IC50=2640nM
    267274 4rzw:B (3.493) BS01 B1E 2.7.11.1 GO:0004672 ... P15056 N/A BindingDB: IC50=2640nM
    267275 4rzy:A (1.949) BS01 FE N/A N/A N/A 26154071
    267276 4rzy:A (1.949) BS02 FE N/A N/A N/A 26154071
    267277 4rzy:B (1.949) BS01 FE N/A N/A N/A 26154071
    267278 4rzy:B (1.949) BS02 FE N/A N/A N/A 26154071
    267279 4rzy:C (1.949) BS01 FE N/A N/A N/A 26154071
    267280 4rzy:C (1.949) BS02 FE N/A N/A N/A 26154071
    267281 4rzy:D (1.949) BS01 FE N/A N/A N/A 26154071
    267282 4rzy:D (1.949) BS02 FE N/A N/A N/A 26154071
    267283 4rzz:A (2.1) BS01 FE N/A N/A N/A 26154071
    267284 4rzz:A (2.1) BS02 FE N/A N/A N/A 26154071
    267285 4rzz:B (2.1) BS01 FE N/A N/A N/A 26154071
    267286 4rzz:B (2.1) BS02 FE N/A N/A N/A 26154071
    267287 4rzz:C (2.1) BS01 FE N/A N/A N/A 26154071
    267288 4rzz:C (2.1) BS02 FE N/A N/A N/A 26154071
    267289 4rzz:D (2.1) BS01 FE N/A N/A N/A 26154071
    267290 4rzz:D (2.1) BS02 FE N/A N/A N/A 26154071
    267291 4s00:A (2.099) BS01 FE N/A N/A N/A 26154071
    267292 4s00:A (2.099) BS02 FE N/A N/A N/A 26154071
    267293 4s00:B (2.099) BS01 FE N/A N/A N/A 26154071
    267294 4s00:B (2.099) BS02 FE N/A N/A N/A 26154071
    267295 4s00:C (2.099) BS01 FE N/A N/A N/A 26154071
    267296 4s00:C (2.099) BS02 FE N/A N/A N/A 26154071
    267297 4s00:D (2.099) BS01 FE N/A N/A N/A 26154071
    267298 4s00:D (2.099) BS02 FE N/A N/A N/A 26154071
    267299 4s01:A (2.1) BS01 FE N/A N/A N/A 26154071
    267300 4s01:A (2.1) BS02 FE N/A N/A N/A 26154071
    267301 4s01:B (2.1) BS01 FE N/A N/A N/A 26154071
    267302 4s01:B (2.1) BS02 FE N/A N/A N/A 26154071
    267303 4s01:C (2.1) BS01 FE N/A N/A N/A 26154071
    267304 4s01:C (2.1) BS02 FE N/A N/A N/A 26154071
    267305 4s01:D (2.1) BS01 FE N/A N/A N/A 26154071
    267306 4s01:D (2.1) BS02 FE N/A N/A N/A 26154071
    267307 4s04:A (3.2) BS01 dna ? GO:0000156 ... A0A0R4I965 26564787
    267308 4s04:A (3.2) BS02 dna ? GO:0000156 ... A0A0R4I965 26564787
    267309 4s04:A (3.2) BS03 BEF ? GO:0000156 ... A0A0R4I965 26564787
    267310 4s04:A (3.2) BS04 MG ? GO:0000156 ... A0A0R4I965 26564787
    267311 4s04:B (3.2) BS01 dna ? GO:0000156 ... A0A0R4I965 26564787
    267312 4s04:B (3.2) BS02 dna ? GO:0000156 ... A0A0R4I965 26564787
    267313 4s04:B (3.2) BS03 BEF ? GO:0000156 ... A0A0R4I965 26564787
    267314 4s04:B (3.2) BS04 MG ? GO:0000156 ... A0A0R4I965 26564787
    267315 4s04:E (3.2) BS01 dna ? GO:0000156 ... A0A0R4I965 26564787
    267316 4s04:E (3.2) BS02 dna ? GO:0000156 ... A0A0R4I965 26564787
    267317 4s04:E (3.2) BS03 BEF ? GO:0000156 ... A0A0R4I965 26564787
    267318 4s04:E (3.2) BS04 MG ? GO:0000156 ... A0A0R4I965 26564787
    267319 4s04:F (3.2) BS01 dna ? GO:0000156 ... A0A0R4I965 26564787
    267320 4s04:F (3.2) BS02 dna ? GO:0000156 ... A0A0R4I965 26564787
    267321 4s04:F (3.2) BS03 BEF ? GO:0000156 ... A0A0R4I965 26564787
    267322 4s04:F (3.2) BS04 MG ? GO:0000156 ... A0A0R4I965 26564787
    267323 4s05:A (3.8) BS01 dna ? GO:0000156 ... A0A0R4I965 26564787
    267324 4s05:A (3.8) BS02 dna ? GO:0000156 ... A0A0R4I965 26564787
    267325 4s05:A (3.8) BS03 BEF ? GO:0000156 ... A0A0R4I965 26564787
    267326 4s05:A (3.8) BS04 MG ? GO:0000156 ... A0A0R4I965 26564787
    267327 4s05:B (3.8) BS01 dna ? GO:0000156 ... A0A0R4I965 26564787
    267328 4s05:B (3.8) BS02 dna ? GO:0000156 ... A0A0R4I965 26564787
    267329 4s05:B (3.8) BS03 BEF ? GO:0000156 ... A0A0R4I965 26564787
    267330 4s05:B (3.8) BS04 MG ? GO:0000156 ... A0A0R4I965 26564787
    267331 4s0f:A (5.515) BS01 AGS 3.4.22.- GO:0005515 ... A3DCU1 26201595
    267332 4s0f:A (5.515) BS02 AGS 3.4.22.- GO:0005515 ... A3DCU1 26201595
    267333 4s0f:B (5.515) BS01 AGS 3.4.22.- GO:0005515 ... A3DCU1 26201595
    267334 4s0f:B (5.515) BS02 AGS 3.4.22.- GO:0005515 ... A3DCU1 26201595
    267335 4s0g:A (1.723) BS01 peptide 3.1.3.48 GO:0004725 ... P26045 25728925
    267336 4s0h:A (2.817) BS01 dna ? GO:0000978 ... Q99593 26926761
    267337 4s0h:A (2.817) BS02 dna ? GO:0000978 ... Q99593 26926761
    267338 4s0h:B (2.817) BS01 dna ? GO:0000981 ... P52952 26926761
    267339 4s0h:B (2.817) BS02 dna ? GO:0000981 ... P52952 26926761
    267340 4s0h:E (2.817) BS01 dna ? GO:0000978 ... Q99593 26926761
    267341 4s0h:E (2.817) BS02 dna ? GO:0000978 ... Q99593 26926761
    267342 4s0h:F (2.817) BS01 dna ? GO:0000981 ... P52952 26926761
    267343 4s0h:F (2.817) BS02 dna ? GO:0000981 ... P52952 26926761
    267344 4s0m:D (1.922) BS01 MG 2.7.4.6 GO:0004550 ... V5VIC4 N/A
    267345 4s0n:A (1.501) BS01 dna 2.3.2.27
    3.6.4.-
    GO:0003676 ... Q14527 26051180
    267346 4s0n:A (1.501) BS02 DT 2.3.2.27
    3.6.4.-
    GO:0003676 ... Q14527 26051180
    267347 4s0n:B (1.501) BS01 dna 2.3.2.27
    3.6.4.-
    GO:0003676 ... Q14527 26051180
    267348 4s0n:C (1.501) BS01 dna 2.3.2.27
    3.6.4.-
    GO:0003676 ... Q14527 26051180
    267349 4s0n:D (1.501) BS01 dna 2.3.2.27
    3.6.4.-
    GO:0003676 ... Q14527 26051180
    267350 4s0n:D (1.501) BS02 dna 2.3.2.27
    3.6.4.-
    GO:0003676 ... Q14527 26051180
    267351 4s0r:A (3.5) BS01 peptide 6.3.1.2 GO:0000287 ... P12425 25691471
    267352 4s0r:A (3.5) BS02 peptide 6.3.1.2 GO:0000287 ... P12425 25691471
    267353 4s0r:A (3.5) BS03 peptide 6.3.1.2 GO:0000287 ... P12425 25691471
    267354 4s0r:A (3.5) BS04 GLN 6.3.1.2 GO:0000287 ... P12425 25691471
    267355 4s0r:A (3.5) BS05 MG 6.3.1.2 GO:0000287 ... P12425 25691471
    267356 4s0r:A (3.5) BS06 MG 6.3.1.2 GO:0000287 ... P12425 25691471
    267357 4s0r:B (3.5) BS01 peptide 6.3.1.2 GO:0000287 ... P12425 25691471
    267358 4s0r:B (3.5) BS02 peptide 6.3.1.2 GO:0000287 ... P12425 25691471
    267359 4s0r:B (3.5) BS03 peptide 6.3.1.2 GO:0000287 ... P12425 25691471
    267360 4s0r:B (3.5) BS04 GLN 6.3.1.2 GO:0000287 ... P12425 25691471
    267361 4s0r:B (3.5) BS05 MG 6.3.1.2 GO:0000287 ... P12425 25691471
    267362 4s0r:B (3.5) BS06 MG 6.3.1.2 GO:0000287 ... P12425 25691471
    267363 4s0r:C (3.5) BS01 peptide 6.3.1.2 GO:0000287 ... P12425 25691471
    267364 4s0r:C (3.5) BS02 peptide 6.3.1.2 GO:0000287 ... P12425 25691471
    267365 4s0r:C (3.5) BS03 peptide 6.3.1.2 GO:0000287 ... P12425 25691471
    267366 4s0r:C (3.5) BS04 MG 6.3.1.2 GO:0000287 ... P12425 25691471
    267367 4s0r:C (3.5) BS05 MG 6.3.1.2 GO:0000287 ... P12425 25691471
    267368 4s0r:C (3.5) BS06 GLN 6.3.1.2 GO:0000287 ... P12425 25691471
    267369 4s0r:C (3.5) BS07 MG 6.3.1.2 GO:0000287 ... P12425 25691471
    267370 4s0r:D (3.5) BS01 peptide 6.3.1.2 GO:0000287 ... P12425 25691471
    267371 4s0r:D (3.5) BS02 peptide 6.3.1.2 GO:0000287 ... P12425 25691471
    267372 4s0r:D (3.5) BS03 GLN 6.3.1.2 GO:0000287 ... P12425 25691471
    267373 4s0r:D (3.5) BS04 MG 6.3.1.2 GO:0000287 ... P12425 25691471
    267374 4s0r:D (3.5) BS05 MG 6.3.1.2 GO:0000287 ... P12425 25691471
    267375 4s0r:D (3.5) BS06 MG 6.3.1.2 GO:0000287 ... P12425 25691471
    267376 4s0r:E (3.5) BS01 peptide 6.3.1.2 GO:0000287 ... P12425 25691471
    267377 4s0r:E (3.5) BS02 peptide 6.3.1.2 GO:0000287 ... P12425 25691471
    267378 4s0r:E (3.5) BS03 GLN 6.3.1.2 GO:0000287 ... P12425 25691471
    267379 4s0r:E (3.5) BS04 MG 6.3.1.2 GO:0000287 ... P12425 25691471
    267380 4s0r:F (3.5) BS01 peptide 6.3.1.2 GO:0000287 ... P12425 25691471
    267381 4s0r:F (3.5) BS02 peptide 6.3.1.2 GO:0000287 ... P12425 25691471
    267382 4s0r:F (3.5) BS03 peptide 6.3.1.2 GO:0000287 ... P12425 25691471
    267383 4s0r:F (3.5) BS04 GLN 6.3.1.2 GO:0000287 ... P12425 25691471
    267384 4s0r:F (3.5) BS05 MG 6.3.1.2 GO:0000287 ... P12425 25691471
    267385 4s0r:G (3.5) BS01 peptide 6.3.1.2 GO:0000287 ... P12425 25691471
    267386 4s0r:G (3.5) BS02 peptide 6.3.1.2 GO:0000287 ... P12425 25691471
    267387 4s0r:G (3.5) BS03 GLN 6.3.1.2 GO:0000287 ... P12425 25691471
    267388 4s0r:H (3.5) BS01 peptide 6.3.1.2 GO:0000287 ... P12425 25691471
    267389 4s0r:H (3.5) BS02 peptide 6.3.1.2 GO:0000287 ... P12425 25691471
    267390 4s0r:H (3.5) BS03 GLN 6.3.1.2 GO:0000287 ... P12425 25691471
    267391 4s0r:H (3.5) BS04 MG 6.3.1.2 GO:0000287 ... P12425 25691471
    267392 4s0r:H (3.5) BS05 MG 6.3.1.2 GO:0000287 ... P12425 25691471
    267393 4s0r:I (3.5) BS01 peptide 6.3.1.2 GO:0000287 ... P12425 25691471
    267394 4s0r:I (3.5) BS02 peptide 6.3.1.2 GO:0000287 ... P12425 25691471
    267395 4s0r:I (3.5) BS03 peptide 6.3.1.2 GO:0000287 ... P12425 25691471
    267396 4s0r:I (3.5) BS04 GLN 6.3.1.2 GO:0000287 ... P12425 25691471
    267397 4s0r:I (3.5) BS05 MG 6.3.1.2 GO:0000287 ... P12425 25691471
    267398 4s0r:I (3.5) BS06 MG 6.3.1.2 GO:0000287 ... P12425 25691471
    267399 4s0r:J (3.5) BS01 peptide 6.3.1.2 GO:0000287 ... P12425 25691471
    267400 4s0r:J (3.5) BS02 peptide 6.3.1.2 GO:0000287 ... P12425 25691471

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).