SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    269401 4tqo:A (2.57) BS01 CA ? GO:0003824 ... Q60AR6 25185034
    269402 4tqo:A (2.57) BS02 PQQ ? GO:0003824 ... Q60AR6 25185034
    269403 4tqo:B (2.57) BS01 CA ? GO:0003824 ... Q60AR6 25185034
    269404 4tqo:B (2.57) BS02 PQQ ? GO:0003824 ... Q60AR6 25185034
    269405 4tqo:C (2.57) BS01 CA ? GO:0003824 ... Q60AR6 25185034
    269406 4tqo:C (2.57) BS02 PQQ ? GO:0003824 ... Q60AR6 25185034
    269407 4tqo:D (2.57) BS01 CA ? GO:0003824 ... Q60AR6 25185034
    269408 4tqo:D (2.57) BS02 PQQ ? GO:0003824 ... Q60AR6 25185034
    269409 4tqo:E (2.57) BS01 CA ? GO:0003824 ... Q60AR6 25185034
    269410 4tqo:E (2.57) BS02 PQQ ? GO:0003824 ... Q60AR6 25185034
    269411 4tqo:F (2.57) BS01 CA ? GO:0003824 ... Q60AR6 25185034
    269412 4tqo:F (2.57) BS02 PQQ ? GO:0003824 ... Q60AR6 25185034
    269413 4tqo:G (2.57) BS01 CA ? GO:0003824 ... Q60AR6 25185034
    269414 4tqo:G (2.57) BS02 PQQ ? GO:0003824 ... Q60AR6 25185034
    269415 4tqo:H (2.57) BS01 CA ? GO:0003824 ... Q60AR6 25185034
    269416 4tqo:H (2.57) BS02 PQQ ? GO:0003824 ... Q60AR6 25185034
    269417 4tqp:A (1.58) BS01 48R ? GO:0001523 ... P02766 26235916
    269418 4tqp:B (1.58) BS01 48R ? GO:0001523 ... P02766 26235916
    269419 4tqq:L (2.499) BS01 BPH ? GO:0009772 ... P0C0Y8 25285049
    269420 4tqq:L (2.499) BS02 BCL ? GO:0009772 ... P0C0Y8 25285049
    269421 4tqq:L (2.499) BS03 BCL ? GO:0009772 ... P0C0Y8 25285049
    269422 4tqq:L (2.499) BS04 UQ1 ? GO:0009772 ... P0C0Y8 25285049
    269423 4tqq:L (2.499) BS05 FE2 ? GO:0009772 ... P0C0Y8 25285049
    269424 4tqq:L (2.499) BS06 U10 ? GO:0009772 ... P0C0Y8 25285049
    269425 4tqq:L (2.499) BS07 BCL ? GO:0009772 ... P0C0Y8 25285049
    269426 4tqq:L (2.499) BS08 BPH ? GO:0009772 ... P0C0Y8 25285049
    269427 4tqq:M (2.499) BS01 BPH ? GO:0009772 ... P0C0Y9 25285049
    269428 4tqq:M (2.499) BS02 BCL ? GO:0009772 ... P0C0Y9 25285049
    269429 4tqq:M (2.499) BS03 FE2 ? GO:0009772 ... P0C0Y9 25285049
    269430 4tqq:M (2.499) BS04 U10 ? GO:0009772 ... P0C0Y9 25285049
    269431 4tqq:M (2.499) BS05 BCL ? GO:0009772 ... P0C0Y9 25285049
    269432 4tqq:M (2.499) BS06 BCL ? GO:0009772 ... P0C0Y9 25285049
    269433 4tqq:M (2.499) BS07 BPH ? GO:0009772 ... P0C0Y9 25285049
    269434 4tqr:A (1.58) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 25569151
    269435 4tqr:A (1.58) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 25569151
    269436 4tqr:A (1.58) BS03 MG 2.7.7.7 GO:0000287 ... Q97W02 25569151
    269437 4tqr:A (1.58) BS04 MG 2.7.7.7 GO:0000287 ... Q97W02 25569151
    269438 4tqr:A (1.58) BS05 MG 2.7.7.7 GO:0000287 ... Q97W02 25569151
    269439 4tqr:A (1.58) BS06 TTP 2.7.7.7 GO:0000287 ... Q97W02 25569151
    269440 4tqs:A (2.06) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 25569151
    269441 4tqs:A (2.06) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 25569151
    269442 4tqs:A (2.06) BS03 DCP 2.7.7.7 GO:0000287 ... Q97W02 25569151
    269443 4tqs:A (2.06) BS04 MG 2.7.7.7 GO:0000287 ... Q97W02 25569151
    269444 4tqs:A (2.06) BS05 MG 2.7.7.7 GO:0000287 ... Q97W02 25569151
    269445 4tqs:A (2.06) BS06 DOC 2.7.7.7 GO:0000287 ... Q97W02 25569151
    269446 4tqs:B (2.06) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 25569151
    269447 4tqs:B (2.06) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 25569151
    269448 4tqs:B (2.06) BS03 DCP 2.7.7.7 GO:0000287 ... Q97W02 25569151
    269449 4tqs:B (2.06) BS04 MG 2.7.7.7 GO:0000287 ... Q97W02 25569151
    269450 4tqs:B (2.06) BS05 MG 2.7.7.7 GO:0000287 ... Q97W02 25569151
    269451 4tqs:B (2.06) BS06 DOC 2.7.7.7 GO:0000287 ... Q97W02 25569151
    269452 4tqt:A (2.15) BS01 ZN 3.5.2.2 GO:0004157 ... A0A0H3G9X2 N/A
    269453 4tqt:A (2.15) BS02 ZN 3.5.2.2 GO:0004157 ... A0A0H3G9X2 N/A
    269454 4tqt:B (2.15) BS01 ZN 3.5.2.2 GO:0004157 ... A0A0H3G9X2 N/A
    269455 4tqt:B (2.15) BS02 ZN 3.5.2.2 GO:0004157 ... A0A0H3G9X2 N/A
    269456 4tqt:C (2.15) BS01 ZN 3.5.2.2 GO:0004157 ... A0A0H3G9X2 N/A
    269457 4tqt:C (2.15) BS02 ZN 3.5.2.2 GO:0004157 ... A0A0H3G9X2 N/A
    269458 4tqt:D (2.15) BS01 ZN 3.5.2.2 GO:0004157 ... A0A0H3G9X2 N/A
    269459 4tqt:D (2.15) BS02 ZN 3.5.2.2 GO:0004157 ... A0A0H3G9X2 N/A
    269460 4tqt:E (2.15) BS01 ZN 3.5.2.2 GO:0004157 ... A0A0H3G9X2 N/A
    269461 4tqt:E (2.15) BS02 ZN 3.5.2.2 GO:0004157 ... A0A0H3G9X2 N/A
    269462 4tqt:F (2.15) BS01 ZN 3.5.2.2 GO:0004157 ... A0A0H3G9X2 N/A
    269463 4tqt:F (2.15) BS02 ZN 3.5.2.2 GO:0004157 ... A0A0H3G9X2 N/A
    269464 4tqu:Q (3.204) BS01 BEM ? N/A A0ACD6B943 26235029
    269465 4tqu:Q (3.204) BS02 BEM ? N/A A0ACD6B943 26235029
    269466 4tqu:Q (3.204) BS03 BEM ? N/A A0ACD6B943 26235029
    269467 4tqu:Q (3.204) BS04 MAW ? N/A A0ACD6B943 26235029
    269468 4tqu:Q (3.204) BS05 CA ? N/A A0ACD6B943 26235029
    269469 4tr0:A (1.951) BS01 GDS ? GO:0003824 ... A8MJH2 25218089
    269470 4tr0:B (1.951) BS01 GDS ? GO:0003824 ... A8MJH2 25218089
    269471 4tr1:A (1.582) BS01 GSH ? GO:0003824 ... A8MJH2 25218089
    269472 4tr1:B (1.582) BS01 GSH ? GO:0003824 ... A8MJH2 25218089
    269473 4tr2:A (2.7) BS01 CA 3.4.21.62 GO:0004252 ... E6Y8B9 25204226
    269474 4tr2:A (2.7) BS02 CA 3.4.21.62 GO:0004252 ... E6Y8B9 25204226
    269475 4tr2:A (2.7) BS03 CA 3.4.21.62 GO:0004252 ... E6Y8B9 25204226
    269476 4tr2:A (2.7) BS04 CA 3.4.21.62 GO:0004252 ... E6Y8B9 25204226
    269477 4tr2:B (2.7) BS01 CA 3.4.21.62 GO:0004252 ... E6Y8B9 25204226
    269478 4tr2:B (2.7) BS02 CA 3.4.21.62 GO:0004252 ... E6Y8B9 25204226
    269479 4tr2:B (2.7) BS03 CA 3.4.21.62 GO:0004252 ... E6Y8B9 25204226
    269480 4tr2:B (2.7) BS04 CA 3.4.21.62 GO:0004252 ... E6Y8B9 25204226
    269481 4tr9:A (2.111) BS01 peptide 4.1.2.13 GO:0003779 ... Q7KQL9 26289816
    269482 4tr9:A (2.111) BS02 peptide 4.1.2.13 GO:0003779 ... Q7KQL9 26289816
    269483 4tr9:A (2.111) BS03 38D 4.1.2.13 GO:0003779 ... Q7KQL9 26289816
    269484 4tr9:B (2.111) BS01 peptide 4.1.2.13 GO:0003779 ... Q7KQL9 26289816
    269485 4tr9:B (2.111) BS02 peptide 4.1.2.13 GO:0003779 ... Q7KQL9 26289816
    269486 4tr9:B (2.111) BS03 38D 4.1.2.13 GO:0003779 ... Q7KQL9 26289816
    269487 4tr9:C (2.111) BS01 peptide 4.1.2.13 GO:0003779 ... Q7KQL9 26289816
    269488 4tr9:C (2.111) BS02 38D 4.1.2.13 GO:0003779 ... Q7KQL9 26289816
    269489 4tr9:D (2.111) BS01 peptide 4.1.2.13 GO:0003779 ... Q7KQL9 26289816
    269490 4tr9:D (2.111) BS02 38D 4.1.2.13 GO:0003779 ... Q7KQL9 26289816
    269491 4trb:B (2.4) BS01 PO4 2.4.2.- N/A Q97W95 25790177
    269492 4trc:A (2.4) BS01 ADE 2.4.2.- N/A Q97W95 25790177
    269493 4trc:B (2.4) BS01 ADE 2.4.2.- N/A Q97W95 25790177
    269494 4trd:A (1.6) BS01 THP 3.1.31.1 GO:0003676 ... P00644 N/A
    269495 4trd:A (1.6) BS02 CA 3.1.31.1 GO:0003676 ... P00644 N/A
    269496 4trf:A (1.63) BS01 35J 5.3.2.1
    5.3.3.12
    GO:0001516 ... P14174 26364929
    269497 4trf:B (1.63) BS01 35J 5.3.2.1
    5.3.3.12
    GO:0001516 ... P14174 26364929
    269498 4trf:C (1.63) BS01 35J 5.3.2.1
    5.3.3.12
    GO:0001516 ... P14174 26364929
    269499 4tri:A (2.0) BS01 HEM 1.14.15.28 GO:0004497 ... A0R4Q6 25210044
    269500 4tri:A (2.0) BS02 C3S 1.14.15.28 GO:0004497 ... A0R4Q6 25210044
    269501 4tri:B (2.0) BS01 C3S 1.14.15.28 GO:0004497 ... A0R4Q6 25210044
    269502 4tri:B (2.0) BS02 HEM 1.14.15.28 GO:0004497 ... A0R4Q6 25210044
    269503 4trj:A (1.73) BS01 NAD 1.3.1.9 GO:0004318 ... P9WGR0 17034137
    269504 4trj:A (1.73) BS02 665 1.3.1.9 GO:0004318 ... P9WGR0 17034137 MOAD: ic50=0.89uM
    269505 4trn:A (1.95) BS01 NAD 1.3.1.9 GO:0004318 ... P9WGR1 25891098
    269506 4tro:A (1.4) BS01 NAD 1.3.1.9 GO:0004318 ... P9WGR1 25891098
    269507 4tro:A (1.4) BS02 ZID 1.3.1.9 GO:0004318 ... P9WGR1 25891098
    269508 4trw:A (2.85) BS01 peptide 3.4.23.46 GO:0004190 ... P56817 26264846
    269509 4trw:B (2.85) BS01 peptide 3.4.23.46 GO:0004190 ... P56817 26264846
    269510 4trw:C (2.85) BS01 peptide 3.4.23.46 GO:0004190 ... P56817 26264846
    269511 4try:A (2.75) BS01 peptide 3.4.23.46 GO:0004190 ... P56817 N/A
    269512 4try:B (2.75) BS01 peptide 3.4.23.46 GO:0004190 ... P56817 N/A
    269513 4try:C (2.75) BS01 peptide 3.4.23.46 GO:0004190 ... P56817 N/A
    269514 4trz:A (3.25) BS01 peptide 3.4.23.46 GO:0004190 ... P56817 26264846
    269515 4trz:B (3.25) BS01 peptide 3.4.23.46 GO:0004190 ... P56817 26264846
    269516 4trz:C (3.25) BS01 peptide 3.4.23.46 GO:0004190 ... P56817 26264846
    269517 4ts1:A (2.5) BS01 TYR 6.1.1.1 GO:0000166 ... P00952 3612807 MOAD: Kd=11.6uM
    269518 4ts1:B (2.5) BS01 TYR 6.1.1.1 GO:0000166 ... P00952 3612807 MOAD: Kd=11.6uM
    269519 4ts3:A (2.3) BS01 FMC 2.4.2.1 GO:0003824 ... P0ABP8 30337572
    269520 4ts3:A (2.3) BS02 PO4 2.4.2.1 GO:0003824 ... P0ABP8 30337572
    269521 4ts3:B (2.3) BS01 PO4 2.4.2.1 GO:0003824 ... P0ABP8 30337572
    269522 4ts3:C (2.3) BS01 PO4 2.4.2.1 GO:0003824 ... P0ABP8 30337572
    269523 4ts3:C (2.3) BS02 FMC 2.4.2.1 GO:0003824 ... P0ABP8 30337572
    269524 4ts3:D (2.3) BS01 FMC 2.4.2.1 GO:0003824 ... P0ABP8 30337572
    269525 4ts3:D (2.3) BS02 PO4 2.4.2.1 GO:0003824 ... P0ABP8 30337572
    269526 4ts3:E (2.3) BS01 PO4 2.4.2.1 GO:0003824 ... P0ABP8 30337572
    269527 4ts3:F (2.3) BS01 PO4 2.4.2.1 GO:0003824 ... P0ABP8 30337572
    269528 4ts3:F (2.3) BS02 FMC 2.4.2.1 GO:0003824 ... P0ABP8 30337572
    269529 4ts5:A (2.4) BS01 AMP 2.4.2.- N/A Q97W95 25790177
    269530 4ts5:A (2.4) BS02 PO4 2.4.2.- N/A Q97W95 25790177
    269531 4ts5:B (2.4) BS01 AMP 2.4.2.- N/A Q97W95 25790177
    269532 4ts5:B (2.4) BS02 PO4 2.4.2.- N/A Q97W95 25790177
    269533 4ts7:A (2.8) BS01 ADP 2.4.2.- N/A Q97W95 25790177
    269534 4ts7:B (2.8) BS01 ADP 2.4.2.- N/A Q97W95 25790177
    269535 4ts7:B (2.8) BS02 PO4 2.4.2.- N/A Q97W95 25790177
    269536 4ts8:A (2.0) BS01 XZ8 2.3.1.-
    2.3.1.48
    N/A Q92793 N/A BindingDB: Kd=20000nM
    269537 4ts9:A (1.77) BS01 FMC 2.4.2.1 GO:0003824 ... P0ABP8 30337572
    269538 4ts9:A (1.77) BS02 PO4 2.4.2.1 GO:0003824 ... P0ABP8 30337572
    269539 4ts9:B (1.77) BS01 PO4 2.4.2.1 GO:0003824 ... P0ABP8 30337572
    269540 4ts9:B (1.77) BS02 FMC 2.4.2.1 GO:0003824 ... P0ABP8 30337572
    269541 4ts9:C (1.77) BS01 FMC 2.4.2.1 GO:0003824 ... P0ABP8 30337572
    269542 4ts9:C (1.77) BS02 PO4 2.4.2.1 GO:0003824 ... P0ABP8 30337572
    269543 4ts9:C (1.77) BS03 FMC 2.4.2.1 GO:0003824 ... P0ABP8 30337572
    269544 4tsd:A (1.53) BS01 ZN ? GO:0005829 ... O25673 26096900
    269545 4tsd:B (1.53) BS01 ZN ? GO:0005829 ... O25673 26096900
    269546 4tsf:A (3.2) BS01 ATP ? GO:0005515 ... P19483 25049402
    269547 4tsf:B (3.2) BS01 ATP ? GO:0005515 ... P19483 25049402
    269548 4tsf:C (3.2) BS01 ATP ? GO:0005515 ... P19483 25049402
    269549 4tsf:D (3.2) BS01 ADP 7.1.2.2 GO:0005515 ... P00829 25049402
    269550 4tsf:E (3.2) BS01 peptide 7.1.2.2 GO:0005515 ... P00829 25049402
    269551 4tsf:E (3.2) BS02 ATP 7.1.2.2 GO:0005515 ... P00829 25049402
    269552 4tsf:F (3.2) BS01 ATP 7.1.2.2 GO:0005515 ... P00829 25049402
    269553 4tsf:F (3.2) BS02 ADP 7.1.2.2 GO:0005515 ... P00829 25049402
    269554 4tsh:A (2.0) BS01 MG ? GO:0005618 ... C9E3B4 25331888
    269555 4tsh:B (2.0) BS01 CA ? N/A C9E3B4 25331888
    269556 4tsh:B (2.0) BS02 CA ? N/A C9E3B4 25331888
    269557 4tsh:B (2.0) BS03 MG ? N/A C9E3B4 25331888
    269558 4tsh:B (2.0) BS04 MG ? N/A C9E3B4 25331888
    269559 4tsk:A (2.5) BS01 MG 1.1.1.86 GO:0000287 ... C8WR67 25172159
    269560 4tsk:A (2.5) BS02 MG 1.1.1.86 GO:0000287 ... C8WR67 25172159
    269561 4tsk:A (2.5) BS03 MG 1.1.1.86 GO:0000287 ... C8WR67 25172159
    269562 4tsk:A (2.5) BS04 NDP 1.1.1.86 GO:0000287 ... C8WR67 25172159
    269563 4tsl:A (1.6) BS01 PC ? GO:0005576 ... B9W5G6 25716479
    269564 4tsl:A (1.6) BS02 PC ? GO:0005576 ... B9W5G6 25716479
    269565 4tsl:B (1.6) BS01 PC ? GO:0005576 ... B9W5G6 25716479
    269566 4tsl:B (1.6) BS02 PC ? GO:0005576 ... B9W5G6 25716479
    269567 4tsm:A (1.899) BS01 GLC ? GO:0005515 ... P0AEX9 25599642
    269568 4tsm:A (1.899) BS02 GLC ? GO:0005515 ... P0AEX9 25599642
    269569 4tsm:A (1.899) BS03 GLC ? GO:0005515 ... P0AEX9 25599642
    269570 4tsm:A (1.899) BS04 GLC ? GO:0005515 ... P0AEX9 25599642
    269571 4tsm:A (1.899) BS05 TMO ? GO:0005515 ... P0AEX9 25599642
    269572 4tsm:A (1.899) BS06 TMO ? GO:0005515 ... P0AEX9 25599642
    269573 4tsm:A (1.899) BS07 TMO ? GO:0005515 ... P0AEX9 25599642
    269574 4tsm:A (1.899) BS08 TMO ? GO:0005515 ... P0AEX9 25599642
    269575 4tsm:A (1.899) BS09 TMO ? GO:0005515 ... P0AEX9 25599642
    269576 4tsm:A (1.899) BS10 TMO ? GO:0005515 ... P0AEX9 25599642
    269577 4tsm:A (1.899) BS11 TMO ? GO:0005515 ... P0AEX9 25599642
    269578 4tsm:B (1.899) BS01 GLC ? GO:0005515 ... P0AEX9 25599642
    269579 4tsm:B (1.899) BS02 GLC ? GO:0005515 ... P0AEX9 25599642
    269580 4tsm:B (1.899) BS03 GLC ? GO:0005515 ... P0AEX9 25599642
    269581 4tsm:B (1.899) BS04 GLC ? GO:0005515 ... P0AEX9 25599642
    269582 4tsm:B (1.899) BS05 TMO ? GO:0005515 ... P0AEX9 25599642
    269583 4tsm:B (1.899) BS06 TMO ? GO:0005515 ... P0AEX9 25599642
    269584 4tsm:B (1.899) BS07 TMO ? GO:0005515 ... P0AEX9 25599642
    269585 4tsm:B (1.899) BS08 TMO ? GO:0005515 ... P0AEX9 25599642
    269586 4tsm:C (1.899) BS01 GLC ? GO:0005515 ... P0AEX9 25599642
    269587 4tsm:C (1.899) BS02 GLC ? GO:0005515 ... P0AEX9 25599642
    269588 4tsm:C (1.899) BS03 GLC ? GO:0005515 ... P0AEX9 25599642
    269589 4tsm:C (1.899) BS04 GLC ? GO:0005515 ... P0AEX9 25599642
    269590 4tsm:C (1.899) BS05 TMO ? GO:0005515 ... P0AEX9 25599642
    269591 4tsm:C (1.899) BS06 TMO ? GO:0005515 ... P0AEX9 25599642
    269592 4tsm:C (1.899) BS07 TMO ? GO:0005515 ... P0AEX9 25599642
    269593 4tsm:C (1.899) BS08 TMO ? GO:0005515 ... P0AEX9 25599642
    269594 4tsm:C (1.899) BS09 TMO ? GO:0005515 ... P0AEX9 25599642
    269595 4tsn:A (1.57) BS01 PC ? GO:0005576 ... B9W5G6 25716479
    269596 4tsn:A (1.57) BS02 PC ? GO:0005576 ... B9W5G6 25716479
    269597 4tsn:A (1.57) BS03 PC ? GO:0005576 ... B9W5G6 25716479
    269598 4tsn:B (1.57) BS01 PC ? GO:0005576 ... B9W5G6 25716479
    269599 4tsn:B (1.57) BS02 PC ? GO:0005576 ... B9W5G6 25716479
    269600 4tsn:C (1.57) BS01 PC ? GO:0005576 ... B9W5G6 25716479

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).