SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    26801 1k4w:A (1.9) BS01 peptide ? GO:0003677 ... P45446 11689423
    26802 1k4y:A (2.5) BS01 4PN 3.1.1.1 GO:0005788 ... P12337 11967565
    26803 1k51:A (1.8) BS01 ZN ? N/A Q51912 11709166
    26804 1k51:A (1.8) BS02 ZN ? N/A Q51912 11709166
    26805 1k52:A (1.8) BS01 ZN ? N/A Q51912 11709166
    26806 1k52:A (1.8) BS02 ZN ? N/A Q51912 11709166
    26807 1k52:B (1.8) BS01 ZN ? N/A Q51912 11709166
    26808 1k53:A (2.1) BS01 ZN ? N/A Q51912 11709166
    26809 1k53:A (2.1) BS02 ZN ? N/A Q51912 11709166
    26810 1k53:B (2.1) BS01 ZN ? N/A Q51912 11709166
    26811 1k54:A (1.7) BS01 HOQ 3.5.2.6 GO:0005886 ... P14489 11724923
    26812 1k54:B (1.7) BS01 HOQ 3.5.2.6 GO:0005886 ... P14489 11724923
    26813 1k5d:A (2.7) BS01 MG 3.6.5.- GO:0000054 ... P62826 11832950
    26814 1k5d:A (2.7) BS02 GNP 3.6.5.- GO:0000054 ... P62826 11832950
    26815 1k5d:D (2.7) BS01 MG 3.6.5.- GO:0000054 ... P62826 11832950
    26816 1k5d:D (2.7) BS02 GNP 3.6.5.- GO:0000054 ... P62826 11832950
    26817 1k5d:G (2.7) BS01 MG 3.6.5.- GO:0000054 ... P62826 11832950
    26818 1k5d:G (2.7) BS02 GNP 3.6.5.- GO:0000054 ... P62826 11832950
    26819 1k5d:J (2.7) BS01 MG 3.6.5.- GO:0000054 ... P62826 11832950
    26820 1k5d:J (2.7) BS02 GNP 3.6.5.- GO:0000054 ... P62826 11832950
    26821 1k5g:A (3.1) BS01 MG 3.6.5.- GO:0000054 ... P62826 11832950
    26822 1k5g:A (3.1) BS02 GDP 3.6.5.- GO:0000054 ... P62826 11832950
    26823 1k5g:A (3.1) BS03 AF3 3.6.5.- GO:0000054 ... P62826 11832950
    26824 1k5g:D (3.1) BS01 MG 3.6.5.- GO:0000054 ... P62826 11832950
    26825 1k5g:D (3.1) BS02 GDP 3.6.5.- GO:0000054 ... P62826 11832950
    26826 1k5g:D (3.1) BS03 AF3 3.6.5.- GO:0000054 ... P62826 11832950
    26827 1k5g:G (3.1) BS01 MG 3.6.5.- GO:0000054 ... P62826 11832950
    26828 1k5g:G (3.1) BS02 GDP 3.6.5.- GO:0000054 ... P62826 11832950
    26829 1k5g:G (3.1) BS03 AF3 3.6.5.- GO:0000054 ... P62826 11832950
    26830 1k5g:J (3.1) BS01 MG 3.6.5.- GO:0000054 ... P62826 11832950
    26831 1k5g:J (3.1) BS02 GDP 3.6.5.- GO:0000054 ... P62826 11832950
    26832 1k5g:J (3.1) BS03 AF3 3.6.5.- GO:0000054 ... P62826 11832950
    26833 1k5n:A (1.09) BS01 peptide ? N/A P01889 12244049
    26834 1k5q:B (2.34) BS01 CA 3.5.1.11 GO:0016787 ... P06875 15254299
    26835 1k5q:B (2.34) BS02 PAC 3.5.1.11 GO:0016787 ... P06875 15254299 MOAD: Ki=1.1mM
    26836 1k5r:A (-1.00) BS01 peptide ? N/A P46937 11687614
    26837 1k5s:B (2.43) BS01 CA 3.5.1.11 GO:0016787 ... P06875 15254299
    26838 1k5s:B (2.43) BS02 GRO 3.5.1.11 GO:0016787 ... P06875 15254299 MOAD: Ki=0.124mM
    26839 1k5w:A (-1.00) BS01 CA ? GO:0016020 ... P21707 11754837
    26840 1k5w:A (-1.00) BS02 CA ? GO:0016020 ... P21707 11754837
    26841 1k61:A (2.1) BS01 dna ? GO:0003677 ... P0CY08 12466549
    26842 1k61:A (2.1) BS02 dna ? GO:0003677 ... P0CY08 12466549
    26843 1k61:B (2.1) BS01 dna ? GO:0003677 ... P0CY08 12466549
    26844 1k61:B (2.1) BS02 dna ? GO:0003677 ... P0CY08 12466549
    26845 1k61:C (2.1) BS01 dna ? GO:0003677 ... P0CY08 12466549
    26846 1k61:D (2.1) BS01 dna ? GO:0003677 ... P0CY08 12466549
    26847 1k61:D (2.1) BS02 dna ? GO:0003677 ... P0CY08 12466549
    26848 1k63:A (1.8) BS01 BRP 3.8.1.5 GO:0003824 ... D4Z2G1 12939138
    26849 1k68:A (1.9) BS01 MG ? GO:0000160 ... A0ACD6B845 15240481
    26850 1k68:B (1.9) BS01 MG ? GO:0000160 ... A0ACD6B845 15240481
    26851 1k6c:A (2.2) BS01 MK1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P35963 11790852
    26852 1k6c:B (2.2) BS01 MK1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P35963 11790852 MOAD: Kd=33nM
    26853 1k6d:B (1.9) BS01 MG 2.8.3.8 GO:0005737 ... P76458 12454473
    26854 1k6e:A (1.85) BS01 1BP 3.8.1.5 GO:0003824 ... D4Z2G1 12939138
    26855 1k6e:A (1.85) BS02 1BP 3.8.1.5 GO:0003824 ... D4Z2G1 12939138
    26856 1k6l:L (3.1) BS01 BCL ? GO:0009772 ... P0C0Y8 11993994
    26857 1k6l:L (3.1) BS02 BCL ? GO:0009772 ... P0C0Y8 11993994
    26858 1k6l:L (3.1) BS03 BPH ? GO:0009772 ... P0C0Y8 11993994
    26859 1k6l:L (3.1) BS04 U10 ? GO:0009772 ... P0C0Y8 11993994
    26860 1k6l:L (3.1) BS05 FE ? GO:0009772 ... P0C0Y8 11993994
    26861 1k6l:L (3.1) BS06 BCL ? GO:0009772 ... P0C0Y8 11993994
    26862 1k6l:L (3.1) BS07 BPH ? GO:0009772 ... P0C0Y8 11993994
    26863 1k6l:M (3.1) BS01 BCL ? GO:0009772 ... P0C0Y9 11993994
    26864 1k6l:M (3.1) BS02 BPH ? GO:0009772 ... P0C0Y9 11993994
    26865 1k6l:M (3.1) BS03 FE ? GO:0009772 ... P0C0Y9 11993994
    26866 1k6l:M (3.1) BS04 BCL ? GO:0009772 ... P0C0Y9 11993994
    26867 1k6l:M (3.1) BS05 BCL ? GO:0009772 ... P0C0Y9 11993994
    26868 1k6l:M (3.1) BS06 BPH ? GO:0009772 ... P0C0Y9 11993994
    26869 1k6l:M (3.1) BS07 U10 ? GO:0009772 ... P0C0Y9 11993994
    26870 1k6l:M (3.1) BS08 SPN ? GO:0009772 ... P0C0Y9 11993994
    26871 1k6m:A (2.4) BS01 AGS 2.7.1.105
    3.1.3.46
    GO:0003824 ... P16118 12379646
    26872 1k6m:B (2.4) BS01 AGS 2.7.1.105
    3.1.3.46
    GO:0003824 ... P16118 12379646
    26873 1k6n:L (3.1) BS01 BCL ? GO:0009772 ... P0C0Y8 11993994
    26874 1k6n:L (3.1) BS02 BCL ? GO:0009772 ... P0C0Y8 11993994
    26875 1k6n:L (3.1) BS03 BPH ? GO:0009772 ... P0C0Y8 11993994
    26876 1k6n:L (3.1) BS04 U10 ? GO:0009772 ... P0C0Y8 11993994
    26877 1k6n:L (3.1) BS05 FE ? GO:0009772 ... P0C0Y8 11993994
    26878 1k6n:L (3.1) BS06 BCL ? GO:0009772 ... P0C0Y8 11993994
    26879 1k6n:L (3.1) BS07 BPH ? GO:0009772 ... P0C0Y8 11993994
    26880 1k6n:M (3.1) BS01 BCL ? GO:0009772 ... P0C0Y9 11993994
    26881 1k6n:M (3.1) BS02 BPH ? GO:0009772 ... P0C0Y9 11993994
    26882 1k6n:M (3.1) BS03 FE ? GO:0009772 ... P0C0Y9 11993994
    26883 1k6n:M (3.1) BS04 BCL ? GO:0009772 ... P0C0Y9 11993994
    26884 1k6n:M (3.1) BS05 BCL ? GO:0009772 ... P0C0Y9 11993994
    26885 1k6n:M (3.1) BS06 BPH ? GO:0009772 ... P0C0Y9 11993994
    26886 1k6n:M (3.1) BS07 U10 ? GO:0009772 ... P0C0Y9 11993994
    26887 1k6n:M (3.1) BS08 SPN ? GO:0009772 ... P0C0Y9 11993994
    26888 1k6o:A (3.19) BS01 dna ? GO:0003700 ... P28324 11846562
    26889 1k6o:A (3.19) BS02 dna ? GO:0003700 ... P28324 11846562
    26890 1k6o:B (3.19) BS01 dna ? GO:0000981 ... P11831 11846562
    26891 1k6o:B (3.19) BS02 dna ? GO:0000981 ... P11831 11846562
    26892 1k6o:C (3.19) BS01 dna ? GO:0000981 ... P11831 11846562
    26893 1k6o:C (3.19) BS02 dna ? GO:0000981 ... P11831 11846562
    26894 1k6p:A (2.2) BS01 XN3 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P35963 11790852
    26895 1k6p:B (2.2) BS01 XN3 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P35963 11790852 MOAD: Kd=44nM
    26896 1k6r:A (2.3) BS01 MX1 3.5.2.6 GO:0005886 ... P14489 N/A
    26897 1k6r:B (2.3) BS01 MX1 3.5.2.6 GO:0005886 ... P14489 N/A
    26898 1k6s:A (2.03) BS01 CA 3.5.2.6 GO:0005886 ... P14489 N/A
    26899 1k6s:A (2.03) BS02 CA 3.5.2.6 GO:0005886 ... P14489 N/A
    26900 1k6s:A (2.03) BS03 IAP 3.5.2.6 GO:0005886 ... P14489 N/A
    26901 1k6s:B (2.03) BS01 CA 3.5.2.6 GO:0005886 ... P14489 N/A
    26902 1k6s:B (2.03) BS02 IAP 3.5.2.6 GO:0005886 ... P14489 N/A
    26903 1k6t:A (2.25) BS01 XN1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P35963 11790852
    26904 1k6t:B (2.25) BS01 XN1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P35963 11790852 MOAD: Kd=24nM
    26905 1k6v:A (2.0) BS01 XN2 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P35963 11790852
    26906 1k6v:B (2.0) BS01 XN2 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P35963 11790852 MOAD: Kd=120nM
    26907 1k6w:A (1.75) BS01 FE 3.5.4.-
    3.5.4.1
    GO:0004131 ... P25524 11812140
    26908 1k6x:A (1.5) BS01 NAD ? GO:0001081 ... Q5AU62 11726498
    26909 1k6y:A (2.4) BS01 ZN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P12497 11743009
    26910 1k6y:B (2.4) BS01 ZN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P12497 11743009
    26911 1k6y:C (2.4) BS01 ZN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P12497 11743009
    26912 1k6y:D (2.4) BS01 ZN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P12497 11743009
    26913 1k70:A (1.8) BS01 FE 3.5.4.-
    3.5.4.1
    GO:0004131 ... P25524 11812140
    26914 1k70:A (1.8) BS02 HPY 3.5.4.-
    3.5.4.1
    GO:0004131 ... P25524 11812140
    26915 1k72:A (1.8) BS01 BGC 3.2.1.4 GO:0004553 ... P37700 12837787
    26916 1k72:A (1.8) BS02 GLC 3.2.1.4 GO:0004553 ... P37700 12837787
    26917 1k72:A (1.8) BS03 CA 3.2.1.4 GO:0004553 ... P37700 12837787
    26918 1k72:A (1.8) BS04 CA 3.2.1.4 GO:0004553 ... P37700 12837787
    26919 1k72:B (1.8) BS01 CA 3.2.1.4 GO:0004553 ... P37700 12837787
    26920 1k72:B (1.8) BS02 CA 3.2.1.4 GO:0004553 ... P37700 12837787
    26921 1k73:1 (3.01) BS01 rna ? GO:0003735 ... P60619 12860128
    26922 1k73:2 (3.01) BS01 rna ? GO:0003723 ... P32410 12860128
    26923 1k73:3 (3.01) BS01 rna ? GO:0003735 ... P22452 12860128
    26924 1k73:4 (3.01) BS01 rna ? GO:0003735 ... P32411 12860128
    26925 1k73:4 (3.01) BS02 MG ? GO:0003735 ... P32411 12860128
    26926 1k73:C (3.01) BS01 rna ? GO:0002181 ... P20276 12860128
    26927 1k73:C (3.01) BS02 MG ? GO:0002181 ... P20276 12860128
    26928 1k73:D (3.01) BS01 rna ? GO:0003723 ... P20279 12860128
    26929 1k73:E (3.01) BS01 rna ? GO:0003735 ... P12735 12860128
    26930 1k73:F (3.01) BS01 rna ? GO:0000049 ... P14124 12860128
    26931 1k73:F (3.01) BS02 rna ? GO:0000049 ... P14124 12860128
    26932 1k73:G (3.01) BS01 rna ? GO:0002181 ... P14135 12860128
    26933 1k73:H (3.01) BS01 rna ? GO:0001682 ... P12743 12860128
    26934 1k73:J (3.01) BS01 rna ? GO:0003735 ... P60617 12860128
    26935 1k73:K (3.01) BS01 rna ? GO:0003729 ... P29198 12860128
    26936 1k73:L (3.01) BS01 rna ? GO:0003735 ... P22450 12860128
    26937 1k73:M (3.01) BS01 rna ? GO:0003735 ... P12737 12860128
    26938 1k73:N (3.01) BS01 rna ? GO:0002181 ... P60618 12860128
    26939 1k73:O (3.01) BS01 rna ? GO:0000027 ... P14123 12860128
    26940 1k73:O (3.01) BS02 rna ? GO:0000027 ... P14123 12860128
    26941 1k73:P (3.01) BS01 rna ? GO:0003723 ... P12733 12860128
    26942 1k73:Q (3.01) BS01 rna ? GO:0003723 ... P14119 12860128
    26943 1k73:R (3.01) BS01 rna ? GO:0003735 ... P12734 12860128
    26944 1k73:R (3.01) BS02 rna ? GO:0003735 ... P12734 12860128
    26945 1k73:S (3.01) BS01 rna ? GO:0002181 ... P10970 12860128
    26946 1k73:T (3.01) BS01 rna ? GO:0003735 ... P12732 12860128
    26947 1k73:U (3.01) BS01 rna ? GO:0003723 ... P10972 12860128
    26948 1k73:U (3.01) BS02 MG ? GO:0003723 ... P10972 12860128
    26949 1k73:V (3.01) BS01 rna ? GO:0003735 ... P14116 12860128
    26950 1k73:W (3.01) BS01 rna ? GO:0003735 ... P10971 12860128
    26951 1k73:X (3.01) BS01 rna ? GO:0000463 ... P14121 12860128
    26952 1k73:X (3.01) BS02 rna ? GO:0000463 ... P14121 12860128
    26953 1k73:Y (3.01) BS01 rna ? GO:0002181 ... P18138 12860128
    26954 1k73:Z (3.01) BS01 rna ? GO:0000166 ... P12736 12860128
    26955 1k73:Z (3.01) BS02 MG ? GO:0000166 ... P12736 12860128
    26956 1k74:A (2.3) BS01 peptide ? GO:0003677 ... P19793 11698662
    26957 1k74:A (2.3) BS02 9CR ? GO:0003677 ... P19793 11698662 BindingDB: EC50=100nM, Ki=583nM, IC50=32nM, Kd=240nM
    26958 1k74:D (2.3) BS01 peptide ? GO:0003677 ... P37231 11698662
    26959 1k74:D (2.3) BS02 544 ? GO:0003677 ... P37231 11698662 BindingDB: EC50=0.280000nM
    26960 1k77:A (1.63) BS01 MG 5.3.1.35 GO:0008903 ... Q46891 12112708
    26961 1k77:A (1.63) BS02 MG 5.3.1.35 GO:0008903 ... Q46891 12112708
    26962 1k78:A (2.25) BS01 dna ? GO:0003677 ... Q02548 11779502
    26963 1k78:A (2.25) BS02 dna ? GO:0003677 ... Q02548 11779502
    26964 1k78:B (2.25) BS01 dna ? GO:0003700 ... P27577 11779502
    26965 1k78:B (2.25) BS02 dna ? GO:0003700 ... P27577 11779502
    26966 1k78:E (2.25) BS01 dna ? GO:0003677 ... Q02548 11779502
    26967 1k78:E (2.25) BS02 dna ? GO:0003677 ... Q02548 11779502
    26968 1k78:F (2.25) BS01 dna ? GO:0003700 ... P27577 11779502
    26969 1k78:F (2.25) BS02 dna ? GO:0003700 ... P27577 11779502
    26970 1k78:I (2.25) BS01 dna ? GO:0003677 ... Q02548 11779502
    26971 1k78:I (2.25) BS02 dna ? GO:0003677 ... Q02548 11779502
    26972 1k79:A (2.4) BS01 dna ? GO:0003700 ... P27577 11779502
    26973 1k79:A (2.4) BS02 dna ? GO:0003700 ... P27577 11779502
    26974 1k79:D (2.4) BS01 dna ? GO:0003700 ... P27577 11779502
    26975 1k79:D (2.4) BS02 dna ? GO:0003700 ... P27577 11779502
    26976 1k7a:A (2.8) BS01 dna ? GO:0003700 ... P27577 11779502
    26977 1k7a:A (2.8) BS02 dna ? GO:0003700 ... P27577 11779502
    26978 1k7a:D (2.8) BS01 dna ? GO:0003700 ... P27577 11779502
    26979 1k7a:D (2.8) BS02 dna ? GO:0003700 ... P27577 11779502
    26980 1k7d:A (2.15) BS01 GRO 3.5.1.11 GO:0016787 ... P06875 15254299
    26981 1k7d:B (2.15) BS01 CA 3.5.1.11 GO:0016787 ... P06875 15254299
    26982 1k7d:B (2.15) BS02 GRO 3.5.1.11 GO:0016787 ... P06875 15254299 MOAD: Ki=0.47mM
    26983 1k7e:A (2.3) BS01 IAG 4.2.1.20 GO:0000162 ... P00929 11756456
    26984 1k7e:B (2.3) BS01 PLP 4.2.1.20 GO:0000162 ... P0A2K1 11756456
    26985 1k7f:A (1.9) BS01 IAV 4.2.1.20 GO:0000162 ... P00929 11756456
    26986 1k7f:B (1.9) BS01 PLP 4.2.1.20 GO:0000162 ... P0A2K1 11756456
    26987 1k7g:A (2.0) BS01 CA 3.4.24.40 GO:0004222 ... P16317 11718553
    26988 1k7g:A (2.0) BS02 CA 3.4.24.40 GO:0004222 ... P16317 11718553
    26989 1k7g:A (2.0) BS03 CA 3.4.24.40 GO:0004222 ... P16317 11718553
    26990 1k7g:A (2.0) BS04 CA 3.4.24.40 GO:0004222 ... P16317 11718553
    26991 1k7g:A (2.0) BS05 CA 3.4.24.40 GO:0004222 ... P16317 11718553
    26992 1k7g:A (2.0) BS06 CA 3.4.24.40 GO:0004222 ... P16317 11718553
    26993 1k7g:A (2.0) BS07 ZN 3.4.24.40 GO:0004222 ... P16317 11718553
    26994 1k7g:A (2.0) BS08 CA 3.4.24.40 GO:0004222 ... P16317 11718553
    26995 1k7h:A (1.92) BS01 ZN 3.1.3.1 GO:0004035 ... Q9BHT8 12083516
    26996 1k7h:A (1.92) BS02 ZN 3.1.3.1 GO:0004035 ... Q9BHT8 12083516
    26997 1k7h:A (1.92) BS03 ZN 3.1.3.1 GO:0004035 ... Q9BHT8 12083516
    26998 1k7h:B (1.92) BS01 ZN 3.1.3.1 GO:0004035 ... Q9BHT8 12083516
    26999 1k7h:B (1.92) BS02 ZN 3.1.3.1 GO:0004035 ... Q9BHT8 12083516
    27000 1k7h:B (1.92) BS03 ZN 3.1.3.1 GO:0004035 ... Q9BHT8 12083516

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).