SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    269801 4tua:QF (3.6) BS01 rna ? GO:0003735 ... Q5SLP8 25352689
    269802 4tua:QF (3.6) BS02 MG ? GO:0003735 ... Q5SLP8 25352689
    269803 4tua:QG (3.6) BS01 rna ? GO:0000049 ... P17291 25352689
    269804 4tua:QH (3.6) BS01 rna ? GO:0003735 ... P0DOY9 25352689
    269805 4tua:QI (3.6) BS01 rna ? GO:0003723 ... P80374 25352689
    269806 4tua:QI (3.6) BS02 rna ? GO:0003723 ... P80374 25352689
    269807 4tua:QJ (3.6) BS01 rna ? GO:0000049 ... Q5SHN7 25352689
    269808 4tua:QK (3.6) BS01 rna ? GO:0003735 ... P80376 25352689
    269809 4tua:QL (3.6) BS01 rna ? GO:0000049 ... Q5SHN3 25352689
    269810 4tua:QM (3.6) BS01 rna ? GO:0000049 ... P80377 25352689
    269811 4tua:QM (3.6) BS02 rna ? GO:0000049 ... P80377 25352689
    269812 4tua:QM (3.6) BS03 MG ? GO:0000049 ... P80377 25352689
    269813 4tua:QN (3.6) BS01 rna ? GO:0003735 ... P0DOY6 25352689
    269814 4tua:QN (3.6) BS02 ZN ? GO:0003735 ... P0DOY6 25352689
    269815 4tua:QO (3.6) BS01 rna ? GO:0003735 ... Q5SJ76 25352689
    269816 4tua:QO (3.6) BS02 rna ? GO:0003735 ... Q5SJ76 25352689
    269817 4tua:QP (3.6) BS01 rna ? GO:0003735 ... Q5SJH3 25352689
    269818 4tua:QQ (3.6) BS01 rna ? GO:0003735 ... P0DOY7 25352689
    269819 4tua:QR (3.6) BS01 rna ? GO:0003735 ... Q5SLQ0 25352689
    269820 4tua:QS (3.6) BS01 rna ? GO:0000028 ... Q5SHP2 25352689
    269821 4tua:QT (3.6) BS01 rna ? GO:0003723 ... P80380 25352689
    269822 4tua:R0 (3.6) BS01 rna ? GO:0003735 ... P60493 25352689
    269823 4tua:R0 (3.6) BS02 rna ? GO:0003735 ... P60493 25352689
    269824 4tua:R0 (3.6) BS03 rna ? GO:0003735 ... P60493 25352689
    269825 4tua:R1 (3.6) BS01 rna ? GO:0003735 ... P60494 25352689
    269826 4tua:R2 (3.6) BS01 rna ? GO:0003735 ... Q5SHP6 25352689
    269827 4tua:R3 (3.6) BS01 rna ? GO:0003735 ... Q5SHQ6 25352689
    269828 4tua:R3 (3.6) BS02 rna ? GO:0003735 ... Q5SHQ6 25352689
    269829 4tua:R4 (3.6) BS01 rna ? GO:0003735 ... Q5SJE1 25352689
    269830 4tua:R4 (3.6) BS02 rna ? GO:0003735 ... Q5SJE1 25352689
    269831 4tua:R5 (3.6) BS01 rna ? GO:0003735 ... P80339 25352689
    269832 4tua:R6 (3.6) BS01 rna ? GO:0003735 ... P35871 25352689
    269833 4tua:R7 (3.6) BS01 rna ? GO:0003735 ... P80340 25352689
    269834 4tua:R8 (3.6) BS01 rna ? GO:0003735 ... Q5SKU1 25352689
    269835 4tua:R9 (3.6) BS01 rna ? GO:0003735 ... Q5SHR2 25352689
    269836 4tua:RD (3.6) BS01 rna ? GO:0002181 ... P60405 25352689
    269837 4tua:RD (3.6) BS02 rna ? GO:0002181 ... P60405 25352689
    269838 4tua:RD (3.6) BS03 MG ? GO:0002181 ... P60405 25352689
    269839 4tua:RD (3.6) BS04 MG ? GO:0002181 ... P60405 25352689
    269840 4tua:RE (3.6) BS01 rna ? GO:0003735 ... Q5SHN8 25352689
    269841 4tua:RF (3.6) BS01 rna ? GO:0003735 ... Q5SHN9 25352689
    269842 4tua:RF (3.6) BS02 MG ? GO:0003735 ... Q5SHN9 25352689
    269843 4tua:RG (3.6) BS01 rna ? GO:0000049 ... Q5SHQ0 25352689
    269844 4tua:RG (3.6) BS02 rna ? GO:0000049 ... Q5SHQ0 25352689
    269845 4tua:RG (3.6) BS03 rna ? GO:0000049 ... Q5SHQ0 25352689
    269846 4tua:RH (3.6) BS01 rna ? GO:0002181 ... P0DOY8 25352689
    269847 4tua:RI (3.6) BS01 rna ? GO:0003735 ... Q5SLQ1 25352689
    269848 4tua:RN (3.6) BS01 rna ? GO:0003729 ... P60488 25352689
    269849 4tua:RO (3.6) BS01 rna ? GO:0003735 ... Q5SHP8 25352689
    269850 4tua:RO (3.6) BS02 rna ? GO:0003735 ... Q5SHP8 25352689
    269851 4tua:RP (3.6) BS01 rna ? GO:0003735 ... Q5SHQ7 25352689
    269852 4tua:RQ (3.6) BS01 rna ? GO:0003735 ... P60489 25352689
    269853 4tua:RQ (3.6) BS02 rna ? GO:0003735 ... P60489 25352689
    269854 4tua:RR (3.6) BS01 rna ? GO:0003735 ... Q9Z9H5 25352689
    269855 4tua:RS (3.6) BS01 rna ? GO:0003735 ... Q5SHQ4 25352689
    269856 4tua:RS (3.6) BS02 rna ? GO:0003735 ... Q5SHQ4 25352689
    269857 4tua:RT (3.6) BS01 rna ? GO:0003735 ... P60490 25352689
    269858 4tua:RT (3.6) BS02 rna ? GO:0003735 ... P60490 25352689
    269859 4tua:RU (3.6) BS01 rna ? GO:0000027 ... P60491 25352689
    269860 4tua:RV (3.6) BS01 rna ? GO:0003723 ... P60492 25352689
    269861 4tua:RW (3.6) BS01 rna ? GO:0003735 ... Q5SHP3 25352689
    269862 4tua:RX (3.6) BS01 rna ? GO:0003735 ... Q5SHP0 25352689
    269863 4tua:RY (3.6) BS01 rna ? GO:0003723 ... Q5SHP9 25352689
    269864 4tua:RZ (3.6) BS01 rna ? GO:0003723 ... Q5SHZ1 25352689
    269865 4tua:RZ (3.6) BS02 rna ? GO:0003723 ... Q5SHZ1 25352689
    269866 4tua:XB (3.6) BS01 rna ? GO:0003735 ... P80371 25352689
    269867 4tua:XC (3.6) BS01 rna ? GO:0003676 ... P80372 25352689
    269868 4tua:XD (3.6) BS01 rna ? GO:0003723 ... P80373 25352689
    269869 4tua:XE (3.6) BS01 rna ? GO:0003723 ... Q5SHQ5 25352689
    269870 4tua:XF (3.6) BS01 rna ? GO:0003735 ... Q5SLP8 25352689
    269871 4tua:XF (3.6) BS02 MG ? GO:0003735 ... Q5SLP8 25352689
    269872 4tua:XG (3.6) BS01 rna ? GO:0000049 ... P17291 25352689
    269873 4tua:XH (3.6) BS01 rna ? GO:0003735 ... P0DOY9 25352689
    269874 4tua:XI (3.6) BS01 rna ? GO:0003723 ... P80374 25352689
    269875 4tua:XI (3.6) BS02 rna ? GO:0003723 ... P80374 25352689
    269876 4tua:XJ (3.6) BS01 rna ? GO:0000049 ... Q5SHN7 25352689
    269877 4tua:XK (3.6) BS01 rna ? GO:0003735 ... P80376 25352689
    269878 4tua:XL (3.6) BS01 rna ? GO:0000049 ... Q5SHN3 25352689
    269879 4tua:XL (3.6) BS02 rna ? GO:0000049 ... Q5SHN3 25352689
    269880 4tua:XM (3.6) BS01 rna ? GO:0000049 ... P80377 25352689
    269881 4tua:XM (3.6) BS02 rna ? GO:0000049 ... P80377 25352689
    269882 4tua:XM (3.6) BS03 rna ? GO:0000049 ... P80377 25352689
    269883 4tua:XM (3.6) BS04 rna ? GO:0000049 ... P80377 25352689
    269884 4tua:XN (3.6) BS01 rna ? GO:0003735 ... P0DOY6 25352689
    269885 4tua:XN (3.6) BS02 ZN ? GO:0003735 ... P0DOY6 25352689
    269886 4tua:XO (3.6) BS01 rna ? GO:0003735 ... Q5SJ76 25352689
    269887 4tua:XO (3.6) BS02 rna ? GO:0003735 ... Q5SJ76 25352689
    269888 4tua:XP (3.6) BS01 rna ? GO:0003735 ... Q5SJH3 25352689
    269889 4tua:XQ (3.6) BS01 rna ? GO:0003735 ... P0DOY7 25352689
    269890 4tua:XR (3.6) BS01 rna ? GO:0003735 ... Q5SLQ0 25352689
    269891 4tua:XS (3.6) BS01 rna ? GO:0000028 ... Q5SHP2 25352689
    269892 4tua:XT (3.6) BS01 rna ? GO:0003723 ... P80380 25352689
    269893 4tua:Y0 (3.6) BS01 rna ? GO:0003735 ... P60493 25352689
    269894 4tua:Y0 (3.6) BS02 rna ? GO:0003735 ... P60493 25352689
    269895 4tua:Y0 (3.6) BS03 rna ? GO:0003735 ... P60493 25352689
    269896 4tua:Y1 (3.6) BS01 rna ? GO:0003735 ... P60494 25352689
    269897 4tua:Y2 (3.6) BS01 rna ? GO:0003735 ... Q5SHP6 25352689
    269898 4tua:Y3 (3.6) BS01 rna ? GO:0003735 ... Q5SHQ6 25352689
    269899 4tua:Y3 (3.6) BS02 rna ? GO:0003735 ... Q5SHQ6 25352689
    269900 4tua:Y4 (3.6) BS01 rna ? GO:0003735 ... Q5SJE1 25352689
    269901 4tua:Y4 (3.6) BS02 rna ? GO:0003735 ... Q5SJE1 25352689
    269902 4tua:Y5 (3.6) BS01 rna ? GO:0003735 ... P80339 25352689
    269903 4tua:Y6 (3.6) BS01 rna ? GO:0003735 ... P35871 25352689
    269904 4tua:Y7 (3.6) BS01 rna ? GO:0003735 ... P80340 25352689
    269905 4tua:Y8 (3.6) BS01 rna ? GO:0003735 ... Q5SKU1 25352689
    269906 4tua:Y9 (3.6) BS01 rna ? GO:0003735 ... Q5SHR2 25352689
    269907 4tua:YD (3.6) BS01 rna ? GO:0002181 ... P60405 25352689
    269908 4tua:YE (3.6) BS01 rna ? GO:0003735 ... Q5SHN8 25352689
    269909 4tua:YF (3.6) BS01 rna ? GO:0003735 ... Q5SHN9 25352689
    269910 4tua:YG (3.6) BS01 rna ? GO:0000049 ... Q5SHQ0 25352689
    269911 4tua:YG (3.6) BS02 rna ? GO:0000049 ... Q5SHQ0 25352689
    269912 4tua:YG (3.6) BS03 rna ? GO:0000049 ... Q5SHQ0 25352689
    269913 4tua:YH (3.6) BS01 rna ? GO:0002181 ... P0DOY8 25352689
    269914 4tua:YI (3.6) BS01 rna ? GO:0003735 ... Q5SLQ1 25352689
    269915 4tua:YI (3.6) BS02 rna ? GO:0003735 ... Q5SLQ1 25352689
    269916 4tua:YN (3.6) BS01 rna ? GO:0003729 ... P60488 25352689
    269917 4tua:YO (3.6) BS01 rna ? GO:0003735 ... Q5SHP8 25352689
    269918 4tua:YO (3.6) BS02 rna ? GO:0003735 ... Q5SHP8 25352689
    269919 4tua:YP (3.6) BS01 rna ? GO:0003735 ... Q5SHQ7 25352689
    269920 4tua:YQ (3.6) BS01 rna ? GO:0003735 ... P60489 25352689
    269921 4tua:YQ (3.6) BS02 rna ? GO:0003735 ... P60489 25352689
    269922 4tua:YR (3.6) BS01 rna ? GO:0003735 ... Q9Z9H5 25352689
    269923 4tua:YS (3.6) BS01 rna ? GO:0003735 ... Q5SHQ4 25352689
    269924 4tua:YS (3.6) BS02 rna ? GO:0003735 ... Q5SHQ4 25352689
    269925 4tua:YT (3.6) BS01 rna ? GO:0003735 ... P60490 25352689
    269926 4tua:YT (3.6) BS02 rna ? GO:0003735 ... P60490 25352689
    269927 4tua:YU (3.6) BS01 rna ? GO:0000027 ... P60491 25352689
    269928 4tua:YV (3.6) BS01 rna ? GO:0003723 ... P60492 25352689
    269929 4tua:YW (3.6) BS01 rna ? GO:0003735 ... Q5SHP3 25352689
    269930 4tua:YX (3.6) BS01 rna ? GO:0003735 ... Q5SHP0 25352689
    269931 4tua:YY (3.6) BS01 rna ? GO:0003723 ... Q5SHP9 25352689
    269932 4tua:YZ (3.6) BS01 rna ? GO:0003723 ... Q5SHZ1 25352689
    269933 4tua:YZ (3.6) BS02 rna ? GO:0003723 ... Q5SHZ1 25352689
    269934 4tub:QB (3.6) BS01 rna ? GO:0003735 ... P80371 25352689
    269935 4tub:QC (3.6) BS01 rna ? GO:0003676 ... P80372 25352689
    269936 4tub:QD (3.6) BS01 rna ? GO:0003723 ... P80373 25352689
    269937 4tub:QD (3.6) BS02 ZN ? GO:0003723 ... P80373 25352689
    269938 4tub:QE (3.6) BS01 rna ? GO:0003723 ... Q5SHQ5 25352689
    269939 4tub:QF (3.6) BS01 rna ? GO:0003735 ... Q5SLP8 25352689
    269940 4tub:QF (3.6) BS02 MG ? GO:0003735 ... Q5SLP8 25352689
    269941 4tub:QG (3.6) BS01 rna ? GO:0000049 ... P17291 25352689
    269942 4tub:QH (3.6) BS01 rna ? GO:0003735 ... P0DOY9 25352689
    269943 4tub:QI (3.6) BS01 rna ? GO:0003723 ... P80374 25352689
    269944 4tub:QI (3.6) BS02 rna ? GO:0003723 ... P80374 25352689
    269945 4tub:QJ (3.6) BS01 rna ? GO:0000049 ... Q5SHN7 25352689
    269946 4tub:QJ (3.6) BS02 rna ? GO:0000049 ... Q5SHN7 25352689
    269947 4tub:QK (3.6) BS01 rna ? GO:0003735 ... P80376 25352689
    269948 4tub:QL (3.6) BS01 rna ? GO:0000049 ... Q5SHN3 25352689
    269949 4tub:QM (3.6) BS01 rna ? GO:0000049 ... P80377 25352689
    269950 4tub:QM (3.6) BS02 rna ? GO:0000049 ... P80377 25352689
    269951 4tub:QM (3.6) BS03 MG ? GO:0000049 ... P80377 25352689
    269952 4tub:QN (3.6) BS01 rna ? GO:0003735 ... P0DOY6 25352689
    269953 4tub:QN (3.6) BS02 ZN ? GO:0003735 ... P0DOY6 25352689
    269954 4tub:QO (3.6) BS01 rna ? GO:0003735 ... Q5SJ76 25352689
    269955 4tub:QO (3.6) BS02 rna ? GO:0003735 ... Q5SJ76 25352689
    269956 4tub:QP (3.6) BS01 rna ? GO:0003735 ... Q5SJH3 25352689
    269957 4tub:QQ (3.6) BS01 rna ? GO:0003735 ... P0DOY7 25352689
    269958 4tub:QR (3.6) BS01 rna ? GO:0003735 ... Q5SLQ0 25352689
    269959 4tub:QS (3.6) BS01 rna ? GO:0000028 ... Q5SHP2 25352689
    269960 4tub:QT (3.6) BS01 rna ? GO:0003723 ... P80380 25352689
    269961 4tub:R0 (3.6) BS01 rna ? GO:0003735 ... P60493 25352689
    269962 4tub:R0 (3.6) BS02 rna ? GO:0003735 ... P60493 25352689
    269963 4tub:R0 (3.6) BS03 rna ? GO:0003735 ... P60493 25352689
    269964 4tub:R1 (3.6) BS01 rna ? GO:0003735 ... P60494 25352689
    269965 4tub:R2 (3.6) BS01 rna ? GO:0003735 ... Q5SHP6 25352689
    269966 4tub:R3 (3.6) BS01 rna ? GO:0003735 ... Q5SHQ6 25352689
    269967 4tub:R3 (3.6) BS02 rna ? GO:0003735 ... Q5SHQ6 25352689
    269968 4tub:R4 (3.6) BS01 rna ? GO:0003735 ... Q5SJE1 25352689
    269969 4tub:R4 (3.6) BS02 rna ? GO:0003735 ... Q5SJE1 25352689
    269970 4tub:R5 (3.6) BS01 rna ? GO:0003735 ... P80339 25352689
    269971 4tub:R6 (3.6) BS01 rna ? GO:0003735 ... P35871 25352689
    269972 4tub:R7 (3.6) BS01 rna ? GO:0003735 ... P80340 25352689
    269973 4tub:R8 (3.6) BS01 rna ? GO:0003735 ... Q5SKU1 25352689
    269974 4tub:R9 (3.6) BS01 rna ? GO:0003735 ... Q5SHR2 25352689
    269975 4tub:RD (3.6) BS01 rna ? GO:0002181 ... P60405 25352689
    269976 4tub:RD (3.6) BS02 rna ? GO:0002181 ... P60405 25352689
    269977 4tub:RD (3.6) BS03 MG ? GO:0002181 ... P60405 25352689
    269978 4tub:RE (3.6) BS01 rna ? GO:0003735 ... Q5SHN8 25352689
    269979 4tub:RF (3.6) BS01 rna ? GO:0003735 ... Q5SHN9 25352689
    269980 4tub:RF (3.6) BS02 MG ? GO:0003735 ... Q5SHN9 25352689
    269981 4tub:RG (3.6) BS01 rna ? GO:0000049 ... Q5SHQ0 25352689
    269982 4tub:RG (3.6) BS02 rna ? GO:0000049 ... Q5SHQ0 25352689
    269983 4tub:RG (3.6) BS03 rna ? GO:0000049 ... Q5SHQ0 25352689
    269984 4tub:RH (3.6) BS01 rna ? GO:0002181 ... P0DOY8 25352689
    269985 4tub:RI (3.6) BS01 rna ? GO:0003735 ... Q5SLQ1 25352689
    269986 4tub:RN (3.6) BS01 rna ? GO:0003729 ... P60488 25352689
    269987 4tub:RO (3.6) BS01 rna ? GO:0003735 ... Q5SHP8 25352689
    269988 4tub:RO (3.6) BS02 rna ? GO:0003735 ... Q5SHP8 25352689
    269989 4tub:RP (3.6) BS01 rna ? GO:0003735 ... Q5SHQ7 25352689
    269990 4tub:RQ (3.6) BS01 rna ? GO:0003735 ... P60489 25352689
    269991 4tub:RQ (3.6) BS02 rna ? GO:0003735 ... P60489 25352689
    269992 4tub:RR (3.6) BS01 rna ? GO:0003735 ... Q9Z9H5 25352689
    269993 4tub:RS (3.6) BS01 rna ? GO:0003735 ... Q5SHQ4 25352689
    269994 4tub:RS (3.6) BS02 rna ? GO:0003735 ... Q5SHQ4 25352689
    269995 4tub:RT (3.6) BS01 rna ? GO:0003735 ... P60490 25352689
    269996 4tub:RT (3.6) BS02 rna ? GO:0003735 ... P60490 25352689
    269997 4tub:RU (3.6) BS01 rna ? GO:0000027 ... P60491 25352689
    269998 4tub:RV (3.6) BS01 rna ? GO:0003723 ... P60492 25352689
    269999 4tub:RW (3.6) BS01 rna ? GO:0003735 ... Q5SHP3 25352689
    270000 4tub:RX (3.6) BS01 rna ? GO:0003735 ... Q5SHP0 25352689

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).